BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017615
(368 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224105455|ref|XP_002313816.1| predicted protein [Populus trichocarpa]
gi|222850224|gb|EEE87771.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/380 (84%), Positives = 353/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP++KIWI
Sbjct: 81 MNREYTSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDKIWI 140
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+N+PVEEGKKQF+VVN GDVV+LPAFGAAV+EM+TL++KNV
Sbjct: 141 TNEIIHNPTVNKRLEEMEVENVPVEEGKKQFEVVNGGDVVILPAFGAAVDEMLTLSSKNV 200
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVWT+VEKHKKGDYTSIIHGKY+HEETVATASFAGKYIIVK+MKEA YV
Sbjct: 201 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKDMKEAMYV 260
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSST+E FLEKFK AVSKGFDPD DLVK+GIANQTTMLKGETE+IGKLV
Sbjct: 261 CDYILGGELNGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIANQTTMLKGETEDIGKLV 320
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+ MMRK+GVENVN+HFISFNTICDATQERQDAMYK+VEEK+DL+LVV
Sbjct: 321 ERIMMRKYGVENVNDHFISFNTICDATQERQDAMYKLVEEKLDLMLVVGGWNSSNTSHLQ 380
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 381 EIAEHHGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPQGPITIGVTSGASTPDKV 440
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKR+EALQ+A
Sbjct: 441 VEDALIKVFDIKRDEALQVA 460
>gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
reductase [Populus trichocarpa]
Length = 426
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/380 (84%), Positives = 352/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLKENG+EY WGNV VKLAE+YGFCWGVERAVQIAYEARKQFP++KIWI
Sbjct: 47 MNREYTSDIIKKLKENGYEYAWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDKIWI 106
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+N+PVEEGKKQF+VVN GDVV+LPAFGAAV+EM+TL++KNV
Sbjct: 107 TNEIIHNPTVNKRLEEMEVENVPVEEGKKQFEVVNGGDVVILPAFGAAVDEMLTLSSKNV 166
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVWT+VEKHKKGDYTSIIHGKY+HEETVATASFAGKYIIVK+MKEA YV
Sbjct: 167 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKDMKEAMYV 226
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSST+E FLEKFK AVSKGFDPD DLVK+GIANQTTMLKGETE+IGKLV
Sbjct: 227 CDYILGGELNGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIANQTTMLKGETEDIGKLV 286
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+ MMRK+GVENVN+HFISFNTICDATQERQDAMYK+VEEK+DL+LVV
Sbjct: 287 ERIMMRKYGVENVNDHFISFNTICDATQERQDAMYKLVEEKLDLMLVVGGWNSSNTSHLQ 346
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 347 EIAEHHGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPQGPITIGVTSGASTPDKV 406
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKR+EALQ+A
Sbjct: 407 VEDALIKVFDIKRDEALQVA 426
>gi|255556135|ref|XP_002519102.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Ricinus communis]
gi|223541765|gb|EEF43313.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Ricinus communis]
Length = 466
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/380 (84%), Positives = 351/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSDIIK LKENG EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 87 MSQEYTSDIIKTLKENGNEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+NIP+EEG+KQF+VVN GDVV+LPAFGAAV+EM+TL+NKNV
Sbjct: 147 TNEIIHNPTVNKRLEEMNVENIPLEEGRKQFEVVNNGDVVILPAFGAAVDEMLTLSNKNV 206
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKYSHEET+ATASFAG YIIVKNMKEA YV
Sbjct: 207 QIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYSHEETIATASFAGTYIIVKNMKEAMYV 266
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKE FL+KFK AVSKGFDPDVDLVKVGIANQTTMLKGETE+IGKLV
Sbjct: 267 CDYILGGQLNGSSSTKEEFLKKFKNAVSKGFDPDVDLVKVGIANQTTMLKGETEDIGKLV 326
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+++GVENVN+HFISFNTICDATQERQDAM+ +VEEK+DLILV+
Sbjct: 327 EKTMMQRYGVENVNDHFISFNTICDATQERQDAMFNLVEEKLDLILVIGGWNSSNTSHLQ 386
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKEN+LP+G ITIG+TSGASTPDK
Sbjct: 387 EIAELRGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPEGPITIGVTSGASTPDKV 446
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREEALQLA
Sbjct: 447 VEDALVKVFDIKREEALQLA 466
>gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea
brasiliensis]
Length = 462
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/380 (85%), Positives = 351/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MNQEYTSDIIK LKENG +Y WGNV +KLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 83 MNQEYTSDIIKTLKENGNQYKWGNVTIKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIPV EGKK F+VV+ GDVV+LPAFGAAVEEM+TL+NKNV
Sbjct: 143 TNEIIHNPTVNKRLEEMNVQNIPVGEGKKHFEVVDSGDVVILPAFGAAVEEMLTLSNKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEET+ATASFAGK+IIVKNM+EA YV
Sbjct: 203 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETIATASFAGKHIIVKNMEEAMYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKEAFLEKFK AVSKGFDPDVDL KVGIANQTTMLKGETEEIGKLV
Sbjct: 263 CDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPDVDLDKVGIANQTTMLKGETEEIGKLV 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVENVN+HFISFNTICDATQERQDAM+K+VEEK+DLILVV
Sbjct: 323 EKTMMRKYGVENVNDHFISFNTICDATQERQDAMFKLVEEKLDLILVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKEN+LP+G ITIGITSGASTPDK
Sbjct: 383 EIAELRGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENFLPEGPITIGITSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKR+EALQ+A
Sbjct: 443 VEDVLVKVFDIKRDEALQVA 462
>gi|353453158|gb|AER00471.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Tanacetum
parthenium]
Length = 455
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/380 (84%), Positives = 347/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MNQEYTSDIIK LKEN +EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 76 MNQEYTSDIIKTLKENNYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 135
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPAFGAAV+EM+TL+NK V
Sbjct: 136 TNEIIHNPTVNKRLEEMEVMDIPIDGGEKQFDVVDKGDVVILPAFGAAVDEMLTLSNKQV 195
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASFAGKYIIVKNM EA YV
Sbjct: 196 QIVDTTCPWVSKVWNIVEKHKKGDYTSIIHGKYNHEETVATASFAGKYIIVKNMDEATYV 255
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L GSSSTKEAF+EKFK AVSKGFDPD DLVK GIANQTTMLKGETEEIGKL+
Sbjct: 256 CDYILGGKLTGSSSTKEAFMEKFKSAVSKGFDPDKDLVKAGIANQTTMLKGETEEIGKLL 315
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+KFGVENVN HF+SFNTICDATQERQDAMYK+V+EKVDL+LV+
Sbjct: 316 ERTMMQKFGVENVNNHFLSFNTICDATQERQDAMYKLVDEKVDLMLVIGGFNSSNTSHLQ 375
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDR IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG ITIG+TSGASTPDK
Sbjct: 376 EIAEDRKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKGPITIGVTSGASTPDKV 435
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVFEIKREEALQLA
Sbjct: 436 VEDALLKVFEIKREEALQLA 455
>gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea
brasiliensis]
Length = 462
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/380 (85%), Positives = 351/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MNQEYTSDIIK LKENG +YTWG+V +KLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 83 MNQEYTSDIIKTLKENGNQYTWGDVTIKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIPV EGKK F+VV+ GDVV+LPAFGAAVEEM+TL+NKNV
Sbjct: 143 TNEIIHNPTVNKRLEEMNVQNIPVGEGKKHFEVVDSGDVVILPAFGAAVEEMLTLSNKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEET+ATASFAGK+IIVKNM+EA YV
Sbjct: 203 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETIATASFAGKHIIVKNMEEAMYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKEAFLEKFK AVSKGFDPDVDL K G+ANQTTMLKGETEEIGKLV
Sbjct: 263 CDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPDVDLDKAGVANQTTMLKGETEEIGKLV 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVENVN+HFISFNTICDATQERQDAM+K+VEEK+DLILVV
Sbjct: 323 EKTMMRKYGVENVNDHFISFNTICDATQERQDAMFKLVEEKLDLILVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKEN+LP+G ITIGITSGASTPDK
Sbjct: 383 EIAELRGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENFLPEGPITIGITSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKR+EALQ+A
Sbjct: 443 VEDVLVKVFDIKRDEALQVA 462
>gi|356545301|ref|XP_003541082.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Glycine max]
Length = 380
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/380 (83%), Positives = 348/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENG+EYTWG V VKLAE+YGFCWGVERAVQIAYEARKQFP E IW+
Sbjct: 1 MNREYTSDIIKTLKENGYEYTWGTVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWL 60
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+EEG KQFDVVNKGDVV+LPAFGAAVEEM+TL+ KNV
Sbjct: 61 TNEIIHNPTVNKRLEEMNVQNIPLEEGGKQFDVVNKGDVVILPAFGAAVEEMLTLSEKNV 120
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW SVEKHK+ DYTS+IHGKY+HEETVATASFAGKYIIVKNM EAEYV
Sbjct: 121 QIVDTTCPWVAKVWNSVEKHKQRDYTSVIHGKYAHEETVATASFAGKYIIVKNMAEAEYV 180
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIANQTTMLKGETEEIGKL+
Sbjct: 181 CDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIANQTTMLKGETEEIGKLL 240
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL+LVV
Sbjct: 241 ERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDLMLVVGGWNSSNTSHLQ 300
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 301 EIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 360
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L +VF++KREEA+QLA
Sbjct: 361 VEDALIRVFDLKREEAMQLA 380
>gi|356538819|ref|XP_003537898.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Glycine max]
Length = 462
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/380 (83%), Positives = 348/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LK+NG+EYTWG V VKLAE+YGFCWGVERAVQIAYEARKQFP E IWI
Sbjct: 83 MNREYTSDIIKTLKDNGYEYTWGTVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+EE KQFDVVNKGDVV+LPAFGAAVEEM+TL+ KNV
Sbjct: 143 TNEIIHNPTVNKRLEEMNVQNIPLEESGKQFDVVNKGDVVILPAFGAAVEEMLTLSEKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW SVEKHK+GDYTS+IHGKY+HEETVATASFAGKYIIVKNMKEAEYV
Sbjct: 203 QIVDTTCPWVAKVWNSVEKHKQGDYTSVIHGKYAHEETVATASFAGKYIIVKNMKEAEYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIANQTTMLKGETE+IGKL+
Sbjct: 263 CDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIANQTTMLKGETEDIGKLL 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM K+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL+LVV
Sbjct: 323 ERTMMHKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDLMLVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 383 EIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L +VF++KREEA+QLA
Sbjct: 443 VEDALIRVFDLKREEAMQLA 462
>gi|114329246|gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Camptotheca acuminata]
Length = 459
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/380 (83%), Positives = 349/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENG EYTWGNV VKLAESYGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 80 MNREYTSDIIKTLKENGNEYTWGNVTVKLAESYGFCWGVERAVQIAYEARKQFPDEKIWI 139
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEII NPTVNKRLEEM V+NIP+E+GKKQFDVV+KGDVV+LPAFGA V+EM+ L++KNV
Sbjct: 140 TNEIIRNPTVNKRLEEMEVENIPIEDGKKQFDVVDKGDVVILPAFGAGVDEMLVLSDKNV 199
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASFAGK+IIVKNM EA YV
Sbjct: 200 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASFAGKFIIVKNMAEATYV 259
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSSTKEAFLEKFK AVSKGFDPD DL KVGIANQTTMLKGETEEIGKLV
Sbjct: 260 CDYILGGELDGSSSTKEAFLEKFKYAVSKGFDPDSDLAKVGIANQTTMLKGETEEIGKLV 319
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENVNEHFISFNTICDATQERQDAMYK+VEE +DL+LV+
Sbjct: 320 ERTMMRKYGVENVNEHFISFNTICDATQERQDAMYKLVEENLDLMLVIGGWNSSNTSHLQ 379
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYWIDSE+R+GPGNKI++KL HGELVEKENWLP+G +TIG+TSGASTPDK
Sbjct: 380 EISELRGIPSYWIDSEQRVGPGNKISFKLNHGELVEKENWLPQGPVTIGVTSGASTPDKV 439
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 440 VEDVLIKVFDIKREEALQLA 459
>gi|343466165|gb|AEM42976.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Siraitia
grosvenorii]
Length = 470
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/380 (84%), Positives = 349/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKE+ +EYTWG+V VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 91 MNREYTSDIIKTLKEHEYEYTWGDVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 150
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+NIP+EEGKKQF+VVNKGDVV+LPAFGAAV+EM+TL+ KNV
Sbjct: 151 TNEIIHNPTVNKRLEEMEVENIPLEEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNV 210
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGD+TSIIHGKY+HEETVATASFAGKYIIVKNM EA YV
Sbjct: 211 QIVDTTCPWVSKVWNVVEKHKKGDFTSIIHGKYAHEETVATASFAGKYIIVKNMAEATYV 270
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSS TKE F++KFK AVSKGFDPD+DLVKVGIANQTTMLKGETEEIGKLV
Sbjct: 271 CDYILGGELDGSSPTKEEFMKKFKNAVSKGFDPDIDLVKVGIANQTTMLKGETEEIGKLV 330
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK GVENVNEHFISFNTICDATQERQDAMYK+VE K+DL+LVV
Sbjct: 331 ERTMMRKHGVENVNEHFISFNTICDATQERQDAMYKLVEGKLDLMLVVGGWNSSNTSHLQ 390
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IAEDRGIPSYW+DSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 391 QIAEDRGIPSYWVDSEQRIGPGNKIAYKLNHGELVEKENWLPRGPITIGVTSGASTPDKV 450
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQ A
Sbjct: 451 VEDVLIKVFDIKREEALQFA 470
>gi|255641515|gb|ACU21031.1| unknown [Glycine max]
Length = 380
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/380 (83%), Positives = 347/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENG+EYTWG V VKLAE+YGFCWGVERAVQIAYEARKQFP E IW+
Sbjct: 1 MNREYTSDIIKTLKENGYEYTWGTVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWL 60
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+EEG KQFDVVNKGDVV+LPA GAAVEEM+TL+ KNV
Sbjct: 61 TNEIIHNPTVNKRLEEMNVQNIPLEEGGKQFDVVNKGDVVILPALGAAVEEMLTLSEKNV 120
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW SVEKHK+ DYTS+IHGKY+HEETVATASFAGKYIIVKNM EAEYV
Sbjct: 121 QIVDTTCPWVAKVWNSVEKHKQRDYTSVIHGKYAHEETVATASFAGKYIIVKNMAEAEYV 180
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIANQTTMLKGETEEIGKL+
Sbjct: 181 CDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIANQTTMLKGETEEIGKLL 240
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL+LVV
Sbjct: 241 ERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDLMLVVGGWNSSNTSHLQ 300
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 301 EIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 360
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L +VF++KREEA+QLA
Sbjct: 361 VEDALIRVFDLKREEAMQLA 380
>gi|449438464|ref|XP_004137008.1| PREDICTED: LOW QUALITY PROTEIN: 4-hydroxy-3-methylbut-2-enyl
diphosphate reductase, chloroplastic-like [Cucumis
sativus]
Length = 463
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/380 (83%), Positives = 348/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENGFEYTWG+V VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIW+
Sbjct: 84 MNREYTSDIIKTLKENGFEYTWGDVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWL 143
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+E+G+KQF+VV+KGDVV+LPAFGAAV+EM+TL+ K V
Sbjct: 144 TNEIIHNPTVNKRLEEMEVQNIPLEDGRKQFEVVDKGDVVILPAFGAAVDEMLTLSEKKV 203
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW V+KHKKGDYTSIIHGKY+HEETVATASFAG +IIVKNM EA YV
Sbjct: 204 QIVDTTCPWVSKVWNVVDKHKKGDYTSIIHGKYAHEETVATASFAGTFIIVKNMAEAIYV 263
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSSTKE F++KFK AVSKGFDPDVDL+KVGIANQTTMLKGETEEIGKLV
Sbjct: 264 CDYILGGELDGSSSTKEEFMKKFKNAVSKGFDPDVDLLKVGIANQTTMLKGETEEIGKLV 323
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK GVENVNEHF+SFNTICDATQERQDAMYK+VE K+DL+LVV
Sbjct: 324 ERTMMRKHGVENVNEHFLSFNTICDATQERQDAMYKLVEGKLDLMLVVGGWNSSNTSHLQ 383
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKENWLPKG ITIG+TSGASTPDK
Sbjct: 384 EIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENWLPKGHITIGVTSGASTPDKV 443
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREEALQ A
Sbjct: 444 VEDALIKVFDIKREEALQFA 463
>gi|449506403|ref|XP_004162740.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 468
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/380 (83%), Positives = 348/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENGFEYTWG+V VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIW+
Sbjct: 89 MNREYTSDIIKTLKENGFEYTWGDVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWL 148
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+E+G+KQF+VV+KGDVV+LPAFGAAV+EM+TL+ K V
Sbjct: 149 TNEIIHNPTVNKRLEEMEVQNIPLEDGRKQFEVVDKGDVVILPAFGAAVDEMLTLSEKKV 208
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW V+KHKKGDYTSIIHGKY+HEETVATASFAG +IIVKNM EA YV
Sbjct: 209 QIVDTTCPWVSKVWNVVDKHKKGDYTSIIHGKYAHEETVATASFAGTFIIVKNMAEAIYV 268
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSSTKE F++KFK AVSKGFDPDVDL+KVGIANQTTMLKGETEEIGKLV
Sbjct: 269 CDYILGGELDGSSSTKEEFMKKFKNAVSKGFDPDVDLLKVGIANQTTMLKGETEEIGKLV 328
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK GVENVNEHF+SFNTICDATQERQDAMYK+VE K+DL+LVV
Sbjct: 329 ERTMMRKHGVENVNEHFLSFNTICDATQERQDAMYKLVEGKLDLMLVVGGWNSSNTSHLQ 388
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKENWLPKG ITIG+TSGASTPDK
Sbjct: 389 EIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENWLPKGHITIGVTSGASTPDKV 448
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREEALQ A
Sbjct: 449 VEDALIKVFDIKREEALQFA 468
>gi|225428566|ref|XP_002284659.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Vitis vinifera]
Length = 465
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/380 (83%), Positives = 350/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENG EY WGNV VKLAE+YGFCWGVERAVQIAYEARKQFPEEKIWI
Sbjct: 86 MNREYTSDIIKTLKENGNEYKWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPEEKIWI 145
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL EM V++IP+++G+KQF+VV+KGDVV+LPAFGAAV+EM+TL+NKNV
Sbjct: 146 TNEIIHNPTVNQRLAEMEVKDIPIDDGQKQFEVVDKGDVVILPAFGAAVDEMLTLSNKNV 205
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKG+YTSIIHGKYSHEET+ATASFAGKYIIVKNM EA YV
Sbjct: 206 QIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIATASFAGKYIIVKNMAEAMYV 265
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSST+E F EKFK A+S+GFDPD+DL KVGIANQTTMLKGETEEIGKLV
Sbjct: 266 CDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVGIANQTTMLKGETEEIGKLV 325
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEEK+D++LVV
Sbjct: 326 ERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEKLDVMLVVGGWNSSNTSHLQ 385
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYWIDSEKRIGPGN+I++KLMHGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 386 EIAEDRGIPSYWIDSEKRIGPGNRISHKLMHGELVEKENWLPEGPITIGVTSGASTPDKV 445
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 446 VEDVLIKVFDIKREEALQLA 465
>gi|91255003|gb|ABB88836.2| IPP/DMAPP synthase [Stevia rebaudiana]
Length = 458
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/380 (83%), Positives = 346/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MNQEYTSDIIK LKEN EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 79 MNQEYTSDIIKTLKENNNEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWI 138
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V++IPV++G+KQFDV++KGDVV+LPAFGAAV EM+TL++K V
Sbjct: 139 TNEIIHNPTVNKRLEEMEVKDIPVKDGEKQFDVIDKGDVVILPAFGAAVNEMLTLSDKQV 198
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVWTSVEKHKKG YTSIIHGKYSHEETVATASFAGKY+IVKNM EA YV
Sbjct: 199 QIVDTTCPWVSKVWTSVEKHKKGAYTSIIHGKYSHEETVATASFAGKYVIVKNMDEATYV 258
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKEAFLEKFK AVS GFDPD DLVK G+ANQTTMLKGETEEIGKLV
Sbjct: 259 CDYILGGKLNGSSSTKEAFLEKFKYAVSNGFDPDTDLVKTGVANQTTMLKGETEEIGKLV 318
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM K+GVEN EHFISFNTICDATQERQDAMYK+V+EK+DL+LVV
Sbjct: 319 ERTMMSKYGVENATEHFISFNTICDATQERQDAMYKLVDEKMDLMLVVGGWNSSNTSHLQ 378
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E+RGIPSYWID+ +R+GPGN+IAYK MHGELVEKENWLPKG +TIGITSGASTPDKA
Sbjct: 379 EIPEERGIPSYWIDTVERVGPGNRIAYKTMHGELVEKENWLPKGPLTIGITSGASTPDKA 438
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVLK+VFEIKREE+LQ A
Sbjct: 439 VEDVLKRVFEIKREESLQFA 458
>gi|297741414|emb|CBI32545.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/380 (83%), Positives = 350/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LKENG EY WGNV VKLAE+YGFCWGVERAVQIAYEARKQFPEEKIWI
Sbjct: 1 MNREYTSDIIKTLKENGNEYKWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPEEKIWI 60
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL EM V++IP+++G+KQF+VV+KGDVV+LPAFGAAV+EM+TL+NKNV
Sbjct: 61 TNEIIHNPTVNQRLAEMEVKDIPIDDGQKQFEVVDKGDVVILPAFGAAVDEMLTLSNKNV 120
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKG+YTSIIHGKYSHEET+ATASFAGKYIIVKNM EA YV
Sbjct: 121 QIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIATASFAGKYIIVKNMAEAMYV 180
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSST+E F EKFK A+S+GFDPD+DL KVGIANQTTMLKGETEEIGKLV
Sbjct: 181 CDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVGIANQTTMLKGETEEIGKLV 240
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEEK+D++LVV
Sbjct: 241 ERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEKLDVMLVVGGWNSSNTSHLQ 300
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYWIDSEKRIGPGN+I++KLMHGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 301 EIAEDRGIPSYWIDSEKRIGPGNRISHKLMHGELVEKENWLPEGPITIGVTSGASTPDKV 360
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 361 VEDVLIKVFDIKREEALQLA 380
>gi|157849590|gb|ABV89582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rauvolfia
verticillata]
Length = 462
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/380 (80%), Positives = 353/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EY SDII+KLK+NG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E+IW+
Sbjct: 83 MNREYASDIIQKLKDNGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTERIWL 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLEEM V+ IP+++G+KQFDVV++GDVV+LPAFGA V+EM+TL+NKNV
Sbjct: 143 TNEIIHNPTVNERLEEMKVKEIPLDDGEKQFDVVDQGDVVILPAFGAGVDEMLTLSNKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV KVW SVEKHKKGDYTSIIHGKYSHEET+AT+SFAGKYIIVKNMKEA YV
Sbjct: 203 QIVDTTCPWVVKVWNSVEKHKKGDYTSIIHGKYSHEETIATSSFAGKYIIVKNMKEAIYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKEAF+EKFK AVSKGFDPD DL+KVGIANQTTMLKGETEEIGKL+
Sbjct: 263 CDYILGGQLDGSSSTKEAFMEKFKNAVSKGFDPDNDLLKVGIANQTTMLKGETEEIGKLI 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GV+N+N+HF+SFNTICDATQERQDAMYK+V++ VDL+LV+
Sbjct: 323 ERTMMRKYGVQNINDHFMSFNTICDATQERQDAMYKLVDQSVDLMLVIGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G ITIG+TSGASTPDK
Sbjct: 383 EIAEERGIPSYWIDSEERIGPGNRISYKLLHGELVEKENFLPEGPITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 443 VEDVLVKVFDIKREEALQLA 462
>gi|388494250|gb|AFK35191.1| unknown [Lotus japonicus]
Length = 453
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/380 (82%), Positives = 344/380 (90%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDII+ LKENG+EYTWGNV V LAE+YGFCWGVERAVQIAYEARKQFP+EKIW+
Sbjct: 74 MNREYTSDIIRTLKENGYEYTWGNVTVMLAEAYGFCWGVERAVQIAYEARKQFPDEKIWL 133
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M VQNIP+E+GKKQFDVVNKGDVV+ PAFGA V+EM+ L+ KNV
Sbjct: 134 TNEIIHNPTVNKRLEDMQVQNIPLEDGKKQFDVVNKGDVVMFPAFGAGVDEMLALSEKNV 193
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEET+ATASFA KYIIVKNM EAEYV
Sbjct: 194 QIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETIATASFAAKYIIVKNMAEAEYV 253
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSSTKEA LEKFK AVSKGFDPD DLVK+GI NQTTMLKGETE+IGKLV
Sbjct: 254 CDYILGGELNGSSSTKEALLEKFKFAVSKGFDPDTDLVKLGIVNQTTMLKGETEDIGKLV 313
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRKFGVENVNEHFISFNTICDATQE QD MYK+VE +D +LVV
Sbjct: 314 ERTMMRKFGVENVNEHFISFNTICDATQEIQDTMYKLVERDMDPMLVVGGWNSSNTSHLQ 373
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+R IPSYWID+E+RIGPGN+IAYKLMHGELVEKEN+LP+G ITIGITSGASTPDK
Sbjct: 374 EIAEERRIPSYWIDTEQRIGPGNRIAYKLMHGELVEKENFLPQGPITIGITSGASTPDKV 433
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF++KREEALQLA
Sbjct: 434 VEDVLIKVFDLKREEALQLA 453
>gi|113170997|gb|ABI30631.1| 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase [Catharanthus
roseus]
Length = 462
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/380 (81%), Positives = 349/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EY SDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E++W+
Sbjct: 83 MNREYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTERLWL 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLEEM VQ IP+E+GKKQFDVV+KGDVV+LPAFGA V+EM+T+++KNV
Sbjct: 143 TNEIIHNPTVNQRLEEMKVQEIPIEDGKKQFDVVDKGDVVILPAFGAGVDEMLTVSDKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV KVW VEKHKKG+YTS+IHGKY HEET+ATASFAGKYIIVKNMKEA YV
Sbjct: 203 QIVDTTCPWVVKVWNVVEKHKKGEYTSVIHGKYGHEETIATASFAGKYIIVKNMKEATYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C YILGG+L+GSSST+EAF+EKFK AVS+GFDPD DL+KVGIANQTTMLKGETEEIGKL+
Sbjct: 263 CGYILGGQLDGSSSTREAFMEKFKNAVSEGFDPDEDLIKVGIANQTTMLKGETEEIGKLI 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GV+NVN+HF+SFNT CDATQERQDAMYK+V+E +DL+LVV
Sbjct: 323 ERTMMRKYGVQNVNDHFMSFNTFCDATQERQDAMYKLVDEPLDLMLVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSEKRIGPGNKI+YKLMHGELVEKEN+LP+G ITIG+TSGASTPDK
Sbjct: 383 EIAEERGIPSYWIDSEKRIGPGNKISYKLMHGELVEKENFLPEGPITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 443 VEDVLVKVFDIKREEALQLA 462
>gi|325557690|gb|ADZ29096.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea
batatas]
Length = 461
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/380 (82%), Positives = 345/380 (90%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLK+NG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E IW+
Sbjct: 82 MNREYTSDIIKKLKDNGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTENIWL 141
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
T EIIHNPTVNKRLE+M V+NIPV EG K FDVVNKGD VVLPAFGA V+EM+TL+ KNV
Sbjct: 142 TPEIIHNPTVNKRLEDMDVKNIPVNEGNKIFDVVNKGDGVVLPAFGAGVDEMLTLSEKNV 201
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 202 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 261
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GS STKEAFLEKFK AVSKGFDPD DL KVGIANQTTMLKGETEEIGKLV
Sbjct: 262 CDYILGGQLDGSRSTKEAFLEKFKCAVSKGFDPDSDLTKVGIANQTTMLKGETEEIGKLV 321
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEE++DL+LV+
Sbjct: 322 ERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEQLDLMLVIGGWNSSNTSHLQ 381
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LPKG I IG+TSGASTPDK
Sbjct: 382 EIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPKGPIKIGVTSGASTPDKV 441
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED+L KVF+IKREEALQ++
Sbjct: 442 VEDILVKVFDIKREEALQIS 461
>gi|124054083|gb|ABM89226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Picrorhiza
kurrooa]
Length = 462
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/380 (81%), Positives = 348/380 (91%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+++EYTSDIIKKLK+NG+EYTWGN+ VKLAESYGFCWGVERAVQIAYEARKQFP E IWI
Sbjct: 83 ISKEYTSDIIKKLKDNGYEYTWGNITVKLAESYGFCWGVERAVQIAYEARKQFPTENIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLE+M V+NIP++ G+KQFDV+NKGDVVVLPAFGAAV+EM+TL+ KNV
Sbjct: 143 TNEIIHNPTVNQRLEDMDVKNIPLDNGQKQFDVINKGDVVVLPAFGAAVDEMLTLSEKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW SVEKHKKG++TSIIHGKYSHEET+ATASFAGKYI+VKNM EA YV
Sbjct: 203 QIVDTTCPWVSKVWNSVEKHKKGEHTSIIHGKYSHEETMATASFAGKYIVVKNMAEATYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILGG+L+GSSSTKEAFLEKFK A+SKGFDPD DLVKVGIANQTTMLKGETE IGKL
Sbjct: 263 RDYILGGKLDGSSSTKEAFLEKFKYALSKGFDPDTDLVKVGIANQTTMLKGETEAIGKLA 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+V+EKVDLI+VV
Sbjct: 323 ERTMMQKYGVENVNNHFMSFNTICDATQERQDAMYKLVDEKVDLIIVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYW+DS+ RIGPGNKI+ KLMHGELVEKENWLP+G ITIG+TSGASTPDKA
Sbjct: 383 EIAEDRGIPSYWVDSDVRIGPGNKISCKLMHGELVEKENWLPEGPITIGVTSGASTPDKA 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL K+F+IKREE LQLA
Sbjct: 443 VEDVLTKIFDIKREELLQLA 462
>gi|402770459|gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camellia sinensis]
Length = 459
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/380 (84%), Positives = 351/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIK LK+NG EYTWGN+ VKLAESYGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 80 MNREYTSDIIKTLKDNGNEYTWGNITVKLAESYGFCWGVERAVQIAYEARKQFPQEKIWI 139
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM VQNIP+++GKKQFDVV+K VVVLPAFGAAV+EM+ LN+KNV
Sbjct: 140 TNEIIHNPTVNKRLEEMDVQNIPIKDGKKQFDVVDKDHVVVLPAFGAAVDEMLVLNDKNV 199
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 200 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 259
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSSTKEAFLEKFK AVSKGFDPD DLVKVGIANQTTMLKGETEEIGKL
Sbjct: 260 CDYILGGELDGSSSTKEAFLEKFKFAVSKGFDPDSDLVKVGIANQTTMLKGETEEIGKLA 319
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRKFGVEN+NEHFISFNTICDATQERQDAMYK+VEE++DL+LVV
Sbjct: 320 ERTMMRKFGVENLNEHFISFNTICDATQERQDAMYKLVEEQLDLMLVVGGWNSSNTSHLQ 379
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E+RGIPSYWIDSE+RIGPGNKI++KLMHGELVEKEN+LP+G ITIG+TSGAST DK
Sbjct: 380 EISEERGIPSYWIDSEQRIGPGNKISHKLMHGELVEKENFLPEGPITIGVTSGASTLDKV 439
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 440 VEDVLIKVFDIKREEALQLA 459
>gi|10716963|gb|AAG21984.1|AF270978_1 LYTB-like protein precursor [Adonis aestivalis var. palaestina]
Length = 464
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/380 (82%), Positives = 341/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EYTSD+IKKLKENG EY+WG V VKLAESYGFCWGVERAVQIAYEARKQFP+EKIWI
Sbjct: 85 MNSEYTSDVIKKLKENGNEYSWGPVTVKLAESYGFCWGVERAVQIAYEARKQFPDEKIWI 144
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+ IPV +GKK FDVV KGDVV+LPAFGAAV EM+TL+ KNV
Sbjct: 145 TNEIIHNPTVNKRLEEMEVKEIPVGDGKKHFDVVAKGDVVILPAFGAAVSEMLTLSEKNV 204
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW SVEKHKKG+YTSIIHGKYSHEET+ATASFAGKYIIVKNM EA YV
Sbjct: 205 QIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEETIATASFAGKYIIVKNMDEAMYV 264
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGELNGSSS K+A LEKFK A+S+GFDPD DL+K GIANQTTMLKGETE+IGKL+
Sbjct: 265 CDYILGGELNGSSSDKQALLEKFKYAISEGFDPDTDLIKTGIANQTTMLKGETEDIGKLL 324
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVEN+N+HFISFNTICDATQERQDAM+K+VEEKVDLILVV
Sbjct: 325 EKTMMRKYGVENINDHFISFNTICDATQERQDAMFKLVEEKVDLILVVGGWNSSNTSHLQ 384
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYWIDSE RIGPGNKI++KL HGELVE ENWLP+G +TIG+TSGASTPDKA
Sbjct: 385 EISELRGIPSYWIDSETRIGPGNKISHKLNHGELVETENWLPEGPVTIGVTSGASTPDKA 444
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKRE+ LQLA
Sbjct: 445 VEDALVKVFDIKREQLLQLA 464
>gi|405789874|gb|AFS28680.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Olea europaea]
Length = 371
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/364 (84%), Positives = 339/364 (93%), Gaps = 12/364 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP EKIWI
Sbjct: 8 MNREYTSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTEKIWI 67
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL+EM V+N+PV++GKK FDVVNKGDVVVLPAFGAAV+EM+ LN+KNV
Sbjct: 68 TNEIIHNPTVNQRLDEMEVKNLPVKDGKKFFDVVNKGDVVVLPAFGAAVDEMLVLNDKNV 127
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVWT+VEKHKKG+Y SIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 128 QIVDTTCPWVSKVWTTVEKHKKGEYASIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 187
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSSTKEAFLEKFK AVS+GFDPD DLVKVGIANQTTMLKGETEEIGKLV
Sbjct: 188 CDYILGGELDGSSSTKEAFLEKFKYAVSEGFDPDTDLVKVGIANQTTMLKGETEEIGKLV 247
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+++MRK+GVEN+N HFISFNTICDATQERQDAMYK+V+E++DL+LVV
Sbjct: 248 ERSLMRKYGVENINNHFISFNTICDATQERQDAMYKLVDEQMDLMLVVGGWNSSNTSHLQ 307
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYWIDSEKRIGPGN+I+YKLMHGELVEKENWLP+G +TIG+TSGASTPDK
Sbjct: 308 EIAEDRGIPSYWIDSEKRIGPGNRISYKLMHGELVEKENWLPEGPVTIGVTSGASTPDKV 367
Query: 349 VEDV 352
VEDV
Sbjct: 368 VEDV 371
>gi|115455133|ref|NP_001051167.1| Os03g0731900 [Oryza sativa Japonica Group]
gi|75254572|sp|Q6AVG6.1|ISPH_ORYSJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic; Flags: Precursor
gi|50540738|gb|AAT77894.1| putative LytB protein [Oryza sativa Japonica Group]
gi|108710907|gb|ABF98702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative,
expressed [Oryza sativa Japonica Group]
gi|113549638|dbj|BAF13081.1| Os03g0731900 [Oryza sativa Japonica Group]
gi|215694051|dbj|BAG89250.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768321|dbj|BAH00550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 459
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/380 (82%), Positives = 339/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD+IK LKENG ++TWG V VKLAE+YGFCWGVERAVQIAYEARKQFP+++IW+
Sbjct: 80 MSQEYTSDVIKTLKENGNQHTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDRIWL 139
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPAFGAAVEEM TLN K V
Sbjct: 140 TNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPAFGAAVEEMYTLNEKKV 199
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGDYTSIIHGKYSHEETVATASFAG YIIVKN+ EA YV
Sbjct: 200 QIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASFAGTYIIVKNIAEASYV 259
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIANQTTMLKGETEEIGKLV
Sbjct: 260 CDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 319
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVENVN+HFI+FNTICDATQERQDAMY++V+EKVDLILVV
Sbjct: 320 EKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDLILVVGGWNSSNTSHLQ 379
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 380 EIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 439
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L+KVFEIKR+E LQ A
Sbjct: 440 VEDALQKVFEIKRQEVLQAA 459
>gi|218193698|gb|EEC76125.1| hypothetical protein OsI_13396 [Oryza sativa Indica Group]
Length = 459
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/380 (81%), Positives = 339/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD+IK LKENG ++TWG V VKLAE+YGFCWGVERAVQIAYEARKQFP+++IW+
Sbjct: 80 MSQEYTSDVIKTLKENGNQHTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDRIWL 139
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPAFGAAVEEM TLN K V
Sbjct: 140 TNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPAFGAAVEEMYTLNEKKV 199
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGDYTSIIHGKYSHEETVATASFAG YIIVKN+ EA YV
Sbjct: 200 QIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASFAGTYIIVKNIAEASYV 259
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIANQTTMLKGETEEIGKLV
Sbjct: 260 CDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 319
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVENVN+HFI+FNTICDATQERQDAMY++V+EKVDLILV+
Sbjct: 320 EKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDLILVIGGWNSSNTSHLQ 379
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 380 EIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 439
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L+KVFEIKR+E LQ A
Sbjct: 440 VEDALQKVFEIKRQEVLQAA 459
>gi|306029974|gb|ADM83430.1| 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase [Nicotiana
benthamiana]
Length = 461
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/381 (82%), Positives = 353/381 (92%), Gaps = 13/381 (3%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
+NQEY +SDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E++W
Sbjct: 81 LNQEYQSSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTERLW 140
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPAFGAAV+EM+ L++KN
Sbjct: 141 ITNEIIHNPTVNKRLEEMEVKNIPIEEGKKNFDVVDKDDVVVLPAFGAAVDEMLVLSDKN 200
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM EA Y
Sbjct: 201 VQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATY 260
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIANQTTMLKGETEEIGKL
Sbjct: 261 VCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIANQTTMLKGETEEIGKL 320
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
VE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V+EK+DL+LVV
Sbjct: 321 VERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDEKLDLMLVVGGWNSSNTSHL 380
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G IT+G+TSGASTPDK
Sbjct: 381 QEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPEGPITVGVTSGASTPDK 440
Query: 348 AVEDVLKKVFEIKREEALQLA 368
AVEDVL KVF IKREEALQLA
Sbjct: 441 AVEDVLIKVFNIKREEALQLA 461
>gi|256032164|gb|AAD55762.2| chloroplast 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase
[Nicotiana tabacum]
Length = 462
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/382 (82%), Positives = 353/382 (92%), Gaps = 14/382 (3%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
+NQEY +SDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E++W
Sbjct: 81 LNQEYQSSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTERLW 140
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPAFGAAV+EM+ L++KN
Sbjct: 141 ITNEIIHNPTVNKRLEEMMVKNIPIEEGKKNFDVVDKDDVVVLPAFGAAVDEMLVLSDKN 200
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM EA Y
Sbjct: 201 VQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATY 260
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIANQTTMLKGETE+IGKL
Sbjct: 261 VCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIANQTTMLKGETEDIGKL 320
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
VE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V++K+DL+LVV
Sbjct: 321 VERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDQKLDLMLVVGGGWNSSNTSH 380
Query: 289 --EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G IT+G+TSGASTPD
Sbjct: 381 LQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPEGPITVGVTSGASTPD 440
Query: 347 KAVEDVLKKVFEIKREEALQLA 368
KAVEDVL KVF IKREEALQLA
Sbjct: 441 KAVEDVLIKVFNIKREEALQLA 462
>gi|350535845|ref|NP_001234728.1| ISPH protein [Solanum lycopersicum]
gi|262176919|gb|ACY27516.1| ISPH protein [Solanum lycopersicum]
Length = 461
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/380 (82%), Positives = 352/380 (92%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLKEN FEYTWGNV VKLAESYGFCWGVERAVQIAYEARKQFP E+IWI
Sbjct: 82 MNREYTSDIIKKLKENEFEYTWGNVTVKLAESYGFCWGVERAVQIAYEARKQFPTERIWI 141
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M V+NIP+EEGKK FDVV+K DVVVLPAFGAAV+EM+ L++KNV
Sbjct: 142 TNEIIHNPTVNKRLEDMDVKNIPLEEGKKNFDVVDKDDVVVLPAFGAAVDEMLVLSDKNV 201
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW +VEKHKKG+YTSIIHGKY+HEETVATASFAGKYIIVKNM EA YV
Sbjct: 202 QIVDTTCPWVTKVWNTVEKHKKGEYTSIIHGKYAHEETVATASFAGKYIIVKNMAEATYV 261
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKEAF++KFK AVS+GFDPDVDLVK GIANQTTMLKGETE+IGKLV
Sbjct: 262 CDYILGGKLDGSSSTKEAFMQKFKYAVSEGFDPDVDLVKAGIANQTTMLKGETEDIGKLV 321
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+VE+K+DL+LV+
Sbjct: 322 ERTMMQKYGVENVNNHFVSFNTICDATQERQDAMYKLVEQKLDLMLVIGGWNSSNTSHLQ 381
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LP+G IT+G+TSGASTPDK
Sbjct: 382 EIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPEGPITVGVTSGASTPDKV 441
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF+IKREEALQLA
Sbjct: 442 VEDVLIKVFDIKREEALQLA 461
>gi|289157416|gb|ADC84348.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Artemisia
annua]
Length = 455
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/379 (80%), Positives = 344/379 (90%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEY SDIIK LKEN +EYTWGNV VKLAE++GFCWGVERAVQIAYEARKQFP++KIWI
Sbjct: 76 MSQEYFSDIIKTLKENNYEYTWGNVTVKLAEAFGFCWGVERAVQIAYEARKQFPDDKIWI 135
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TN+IIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPAFGAAV+EM L+NK V
Sbjct: 136 TNQIIHNPTVNKRLEEMEVTDIPIDGGEKQFDVVDKGDVVILPAFGAAVDEMRILSNKEV 195
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW VEKHKKGDYTS+IHGK++HEETVATASFAGK+I+VKN+ EA YV
Sbjct: 196 QIVDTTCPWVTKVWNVVEKHKKGDYTSVIHGKHNHEETVATASFAGKFIVVKNIDEATYV 255
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKEAF+EKFK AVS+GFDPD DLVK GIANQTTMLKGETEEIGKL+
Sbjct: 256 CDYILGGKLNGSSSTKEAFMEKFKSAVSEGFDPDKDLVKAGIANQTTMLKGETEEIGKLL 315
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+V++KVDL+LV+
Sbjct: 316 ERTMMQKYGVENVNNHFLSFNTICDATQERQDAMYKLVDDKVDLMLVIGGFNSSNTSHLQ 375
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+R IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG ITIG+TSGASTPDK
Sbjct: 376 EIAEERKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKGPITIGVTSGASTPDKV 435
Query: 349 VEDVLKKVFEIKREEALQL 367
VED L KVFEIKREEALQL
Sbjct: 436 VEDALLKVFEIKREEALQL 454
>gi|164452988|gb|ABY57296.1| IPP/DMAPP synthase [Artemisia annua]
Length = 455
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/379 (79%), Positives = 344/379 (90%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEY SDIIK LKEN +EYTWGNV VKLAE++GFCWGVERAVQIAYEARKQFP++KIWI
Sbjct: 76 MSQEYFSDIIKTLKENNYEYTWGNVTVKLAEAFGFCWGVERAVQIAYEARKQFPDDKIWI 135
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TN+IIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPAFGAAV+EM L++K V
Sbjct: 136 TNQIIHNPTVNKRLEEMEVTDIPIDGGEKQFDVVDKGDVVILPAFGAAVDEMRILSDKEV 195
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW VEKHKKGDYTS+IHGK++HEETVATASFAGK+I+VKNM EA YV
Sbjct: 196 QIVDTTCPWVTKVWNVVEKHKKGDYTSVIHGKHNHEETVATASFAGKFIVVKNMDEATYV 255
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+LNGSSSTKEAF+EKFK AVS+GFDPD DLVK GIANQTTMLKGETEEIGKL+
Sbjct: 256 CDYILGGKLNGSSSTKEAFMEKFKYAVSEGFDPDKDLVKAGIANQTTMLKGETEEIGKLL 315
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+GVE+VN HF+SFNTICDATQERQDAMYK+V++KVDL+LV+
Sbjct: 316 ERTMMQKYGVEDVNNHFLSFNTICDATQERQDAMYKLVDDKVDLMLVIGGFNSSNTSHLQ 375
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE+R IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG ITIG+TSGASTPDK
Sbjct: 376 EIAEERKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKGPITIGVTSGASTPDKV 435
Query: 349 VEDVLKKVFEIKREEALQL 367
VED L KVFEIKREEALQL
Sbjct: 436 VEDALLKVFEIKREEALQL 454
>gi|405789872|gb|AFS28679.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Olea europaea]
Length = 371
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/364 (83%), Positives = 336/364 (92%), Gaps = 12/364 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP EKIWI
Sbjct: 8 MNREYTSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTEKIWI 67
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL+EM V+N+PV++GKK FDVVNKGDVVVLPAFGAAV+EM+ LN+KNV
Sbjct: 68 TNEIIHNPTVNQRLDEMEVKNLPVKDGKKFFDVVNKGDVVVLPAFGAAVDEMLVLNDKNV 127
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVWT+VEKHKKG+Y SIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 128 QIVDTTCPWVSKVWTTVEKHKKGEYASIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 187
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGGEL+GSSS KEAFLEKFK AVS+GFDPD DLVKVGIANQTTMLKGETEEI KLV
Sbjct: 188 CDYILGGELDGSSSXKEAFLEKFKYAVSEGFDPDTDLVKVGIANQTTMLKGETEEIXKLV 247
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+++MRK+GVEN+N HFISFNTICDATQERQDAMYK+V+E++DL+LVV
Sbjct: 248 ERSLMRKYGVENINNHFISFNTICDATQERQDAMYKLVDEQMDLMLVVGGWNSSNTSHLQ 307
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYWIDSEKRIGPGN+I+YKLMHGELVEKENWLP+G +TIG+T GASTPDK
Sbjct: 308 EIAEDRGIPSYWIDSEKRIGPGNRISYKLMHGELVEKENWLPEGPVTIGVTYGASTPDKV 367
Query: 349 VEDV 352
VEDV
Sbjct: 368 VEDV 371
>gi|326494910|dbj|BAJ85550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/380 (81%), Positives = 337/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD+IK LK+NG EYTWG V VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IWI
Sbjct: 85 MSQEYTSDVIKTLKDNGNEYTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWI 144
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNK+LE+M V++IPV G K FDV+ +GDVVVLPAFGAAV+EM TLN KNV
Sbjct: 145 TNEIIHNPTVNKKLEDMGVKDIPVNAGIKDFDVIEQGDVVVLPAFGAAVDEMYTLNQKNV 204
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASFAGKYIIVKNM EA YV
Sbjct: 205 QIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMVEATYV 264
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSS+T+E FLEKFKKAVS GFDPDVDL KVGIANQTTMLKGETEEIGKLV
Sbjct: 265 CDYILGGQLDGSSATREEFLEKFKKAVSPGFDPDVDLEKVGIANQTTMLKGETEEIGKLV 324
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRKFGVEN NEHF++FNTICDATQERQDAMY +V+EKVDLILV+
Sbjct: 325 EKTMMRKFGVENANEHFVAFNTICDATQERQDAMYHLVKEKVDLILVIGGWNSSNTSHLQ 384
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGN+IAYKL HGEL+E ENWLP+G ITIG+TSGASTPDK
Sbjct: 385 EIGELSGIPSYWIDSEQRIGPGNRIAYKLNHGELIEAENWLPEGPITIGVTSGASTPDKV 444
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVFEIKR+E LQ+A
Sbjct: 445 VEDTLHKVFEIKRQEVLQVA 464
>gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate reductase [Nicotiana
langsdorffii x Nicotiana sanderae]
Length = 461
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 312/381 (81%), Positives = 351/381 (92%), Gaps = 13/381 (3%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
++QEY +SDIIKKLKENG+EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP E++W
Sbjct: 81 LSQEYQSSDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPTERLW 140
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPAFGAAV+EM+ L++KN
Sbjct: 141 ITNEIIHNPTVNKRLEEMDVKNIPIEEGKKNFDVVDKDDVVVLPAFGAAVDEMLVLSDKN 200
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM EA Y
Sbjct: 201 VQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATY 260
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIANQTTMLKGETEEIGK
Sbjct: 261 VCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIANQTTMLKGETEEIGKS 320
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
VE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V++K+DL+LVV
Sbjct: 321 VERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDQKLDLMLVVGGWNSSNTSHL 380
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G IT+G+TSGASTPDK
Sbjct: 381 QEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPEGPITVGVTSGASTPDK 440
Query: 348 AVEDVLKKVFEIKREEALQLA 368
VEDVL KVF IKREEALQLA
Sbjct: 441 VVEDVLIKVFNIKREEALQLA 461
>gi|224077800|ref|XP_002305413.1| predicted protein [Populus trichocarpa]
gi|222848377|gb|EEE85924.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 309/380 (81%), Positives = 339/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDII+ LKENG +YTWGNV VKLAE+YGFCWGVERAVQIAYEARKQF +EKIWI
Sbjct: 81 MNREYTSDIIEMLKENGNQYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFRDEKIWI 140
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+N+PVEEGKK+F+VVN GDVV+LPAFGAAV+EM TL+NKN+
Sbjct: 141 TNEIIHNPTVNKRLEEMEVENLPVEEGKKRFEVVNGGDVVILPAFGAAVDEMFTLSNKNI 200
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEK KKGDYTSIIHGKY+HEETVATASFAGKYI+VKNMKEA YV
Sbjct: 201 QIVDTTCPWVSKVWNAVEKQKKGDYTSIIHGKYAHEETVATASFAGKYIVVKNMKEAMYV 260
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDY+LGG LNGSSST+E FLEKFKKAVSKGFDPD LVKVGIANQTTMLKGETEEIGKLV
Sbjct: 261 CDYVLGGGLNGSSSTREEFLEKFKKAVSKGFDPDSYLVKVGIANQTTMLKGETEEIGKLV 320
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN+N+HFISFNTICDATQ RQDAMY +VEEK+DL+LVV
Sbjct: 321 ERTMMRKYGVENINDHFISFNTICDATQVRQDAMYNLVEEKLDLMLVVGGWNSSNTSHLQ 380
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYWIDSE+RIGPGN+IAYKL HGEL EKENWLP+G ITIG+TSGASTPDK
Sbjct: 381 EIAELRGIPSYWIDSEQRIGPGNRIAYKLNHGELAEKENWLPEGPITIGVTSGASTPDKV 440
Query: 349 VEDVLKKVFEIKREEALQLA 368
V + L KV I EE LQLA
Sbjct: 441 VGEALVKVLGISGEEGLQLA 460
>gi|357116851|ref|XP_003560190.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Brachypodium distachyon]
Length = 465
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/380 (80%), Positives = 338/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QE+TSD+IK LK+NG EYTWG V VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 86 MSQEFTSDVIKTLKDNGNEYTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWL 145
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M V++IP+ G K FDV+ +GDVVVLPAFGAAVEEM TLN KNV
Sbjct: 146 TNEIIHNPTVNKRLEDMGVKDIPINAGIKDFDVIEQGDVVVLPAFGAAVEEMYTLNEKNV 205
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASFAGKYIIVKNM EA YV
Sbjct: 206 QIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMVEAMYV 265
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSST+E FLEKFKKAVS GFDPDVDL KVGIANQTTMLKGETEEIGKLV
Sbjct: 266 CDYILGGQLDGSSSTREEFLEKFKKAVSPGFDPDVDLEKVGIANQTTMLKGETEEIGKLV 325
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRKFGVEN NEHF++FNTICDATQERQDAMY++V++KVDLILV+
Sbjct: 326 EKTMMRKFGVENANEHFVAFNTICDATQERQDAMYQLVKDKVDLILVIGGWNSSNTSHLQ 385
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGN+I+YKL HGEL+E ENWLP+G ITIG+TSGASTPDK
Sbjct: 386 EIGELSGIPSYWIDSEQRIGPGNRISYKLNHGELIETENWLPEGPITIGVTSGASTPDKV 445
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVFEIKR+E LQ+A
Sbjct: 446 VEDALHKVFEIKRQEILQVA 465
>gi|125587813|gb|EAZ28477.1| hypothetical protein OsJ_12459 [Oryza sativa Japonica Group]
Length = 599
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/372 (81%), Positives = 331/372 (88%), Gaps = 12/372 (3%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++K LKENG ++TWG V VKLAE+YGFCWGVERAVQIAYEARKQFP+++IW+TNEIIHNP
Sbjct: 228 VLKTLKENGNQHTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDRIWLTNEIIHNP 287
Query: 69 TVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCP 128
TVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPAFGAAVEEM TLN K VQIVDTTCP
Sbjct: 288 TVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPAFGAAVEEMYTLNEKKVQIVDTTCP 347
Query: 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE 188
WVSKVW VEKHKKGDYTSIIHGKYSHEETVATASFAG YIIVKN+ EA YVCDYILGG+
Sbjct: 348 WVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASFAGTYIIVKNIAEASYVCDYILGGQ 407
Query: 189 LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF 248
L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR+F
Sbjct: 408 LDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRRF 467
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI 296
GVENVN+HFI+FNTICDATQERQDAMY++V+EKVDLILVV EI E GI
Sbjct: 468 GVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDLILVVGGWNSSNTSHLQEIGELSGI 527
Query: 297 PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
PSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G ITIG+TSGASTPDK VED L+KV
Sbjct: 528 PSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKVVEDALQKV 587
Query: 357 FEIKREEALQLA 368
FEIKR+E LQ A
Sbjct: 588 FEIKRQEVLQAA 599
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 103/134 (76%), Gaps = 2/134 (1%)
Query: 1 MNQEYTSDIIKKLKENGFEYTW--GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKI 58
+N EYTS++I +++ NG EY G V++ LAE++GFC GV+ AV++AY+AR +FP+ ++
Sbjct: 97 INLEYTSELISEMERNGGEYVTMDGLVRLILAEAHGFCLGVDNAVRLAYDARVKFPDRRL 156
Query: 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PAFG V+EMVTLN K
Sbjct: 157 WLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPAFGFTVDEMVTLNRK 216
Query: 119 NVQIVDTTCPWVSK 132
NV IVDTTCP V K
Sbjct: 217 NVHIVDTTCPLVLK 230
>gi|242033077|ref|XP_002463933.1| hypothetical protein SORBIDRAFT_01g009140 [Sorghum bicolor]
gi|241917787|gb|EER90931.1| hypothetical protein SORBIDRAFT_01g009140 [Sorghum bicolor]
Length = 464
Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/380 (80%), Positives = 336/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD+IK LKENG +YTWG V VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 85 MSQEYTSDVIKTLKENGNQYTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWL 144
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRL+EM V IPV+ G K F+VV +GDVVVLPAFGAAVEEM TLN K V
Sbjct: 145 TNEIIHNPTVNKRLDEMGVDIIPVDAGIKDFNVVEQGDVVVLPAFGAAVEEMYTLNEKKV 204
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 205 QIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 264
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDVDL +GIANQTTMLKGETEEIGKLV
Sbjct: 265 CDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVDLDMLGIANQTTMLKGETEEIGKLV 324
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDLILV+
Sbjct: 325 EKTMMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDLILVIGGWNSSNTSHLQ 384
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGN I+YKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 385 EIGELSGIPSYWIDSEQRIGPGNMISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 444
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L+KVFEIKR+E LQ+A
Sbjct: 445 VEDALQKVFEIKRQEILQVA 464
>gi|18418433|ref|NP_567965.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arabidopsis
thaliana]
gi|75332071|sp|Q94B35.1|ISPH_ARATH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic; AltName: Full=Protein CHLOROPLAST
BIOGENESIS 6; Flags: Precursor
gi|14596179|gb|AAK68817.1| putative protein [Arabidopsis thaliana]
gi|20148251|gb|AAM10016.1| putative protein [Arabidopsis thaliana]
gi|27368105|gb|AAN87171.1| ISPH [Arabidopsis thaliana]
gi|332660962|gb|AEE86362.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arabidopsis
thaliana]
Length = 466
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/380 (78%), Positives = 340/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDI++ LK NG+ Y+WG+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WI
Sbjct: 87 MNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPAFGA V+EM LN+K V
Sbjct: 147 TNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPAFGAGVDEMYVLNDKKV 206
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW +VEKHKKG+YTS+IHGKY+HEET+ATASFAGKYIIVKNMKEA YV
Sbjct: 207 QIVDTTCPWVTKVWNTVEKHKKGEYTSVIHGKYNHEETIATASFAGKYIIVKNMKEANYV 266
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIANQTTMLKGETEEIG+L+
Sbjct: 267 CDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGETEEIGRLL 326
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL+LVV
Sbjct: 327 ETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDLMLVVGGWNSSNTSHLQ 386
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSGASTPDK
Sbjct: 387 EISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSGASTPDKV 446
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREE LQLA
Sbjct: 447 VEDALVKVFDIKREELLQLA 466
>gi|293333839|ref|NP_001169300.1| uncharacterized protein LOC100383164 [Zea mays]
gi|224028507|gb|ACN33329.1| unknown [Zea mays]
gi|289470758|gb|ADC96733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Zea mays]
gi|414872616|tpg|DAA51173.1| TPA: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Zea mays]
Length = 462
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/380 (80%), Positives = 336/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTS++IK LKENG +YTWG V VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 83 MSQEYTSNVIKTLKENGNQYTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWL 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRL+EM V+ IPV+ G K F+VV +GDVVVLPAFGAAVEEM TLN K V
Sbjct: 143 TNEIIHNPTVNKRLDEMGVEIIPVDAGIKDFNVVEQGDVVVLPAFGAAVEEMYTLNEKKV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 203 QIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDV L VGIANQTTMLKGETEEIGKL+
Sbjct: 263 CDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVHLDMVGIANQTTMLKGETEEIGKLI 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDLILVV
Sbjct: 323 EKTMMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDLILVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RIGPGN+I+YKL HGELVEK NWLP+G ITIG+TSGASTPDK
Sbjct: 383 EIGELSGIPSYWIDSEQRIGPGNRISYKLNHGELVEKNNWLPEGPITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L+KVFEIKR+E LQ+A
Sbjct: 443 VEDALQKVFEIKRQEILQVA 462
>gi|297798476|ref|XP_002867122.1| hypothetical protein ARALYDRAFT_491231 [Arabidopsis lyrata subsp.
lyrata]
gi|297312958|gb|EFH43381.1| hypothetical protein ARALYDRAFT_491231 [Arabidopsis lyrata subsp.
lyrata]
Length = 466
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 339/380 (89%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDI++ LK NG+ Y+WG+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WI
Sbjct: 87 MNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRL +M V+ IPVE+ KKQFDVV K DVV+LPAFGA V+EM LN+K V
Sbjct: 147 TNEIIHNPTVNKRLADMDVKIIPVEDSKKQFDVVEKDDVVILPAFGAGVDEMYVLNDKKV 206
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW +VEKHKKGDYTS+IHGKY+HEET+ATASFAGKYIIVKNMKEA YV
Sbjct: 207 QIVDTTCPWVTKVWNTVEKHKKGDYTSVIHGKYNHEETIATASFAGKYIIVKNMKEANYV 266
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+ +GSSSTKE F+EKFK AVSKGFDPD DLVKVGIANQTTMLKGETEEIGKL+
Sbjct: 267 CDYILGGQYDGSSSTKEEFMEKFKYAVSKGFDPDHDLVKVGIANQTTMLKGETEEIGKLL 326
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL+LV+
Sbjct: 327 ERTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDLMLVIGGWNSSNTSHLQ 386
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYWIDSEKRIGPGNKIA KL +GELVEKEN+LPKG ITIG+TSGASTPDK
Sbjct: 387 EIAEARGIPSYWIDSEKRIGPGNKIASKLHYGELVEKENFLPKGPITIGVTSGASTPDKV 446
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREE LQLA
Sbjct: 447 VEDALVKVFDIKREELLQLA 466
>gi|217069180|gb|ACJ83115.1| hydroxymethylbutenyl diphosphate reductase [Oncidium hybrid
cultivar]
gi|217069182|gb|ACJ83116.1| hydroxymethylbutenyl diphosphate reductase [Oncidium hybrid
cultivar]
Length = 463
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/381 (79%), Positives = 340/381 (89%), Gaps = 13/381 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++EYTSD+IKKLKENG+EY+WGNV VKLAE++GFCWGVERAVQIAYEARKQFPEE+IWI
Sbjct: 83 MDREYTSDVIKKLKENGYEYSWGNVTVKLAEAFGFCWGVERAVQIAYEARKQFPEERIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+NIP+E GKK DVV+K DVV+LPAFGAAV+EM TL+ K V
Sbjct: 143 TNEIIHNPTVNKRLEEMDVKNIPIENGKKLLDVVDKHDVVILPAFGAAVDEMYTLSQKKV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK+GDYTSIIHGKYSHEET+AT+SFA KYI+VKN++EA YV
Sbjct: 203 QIVDTTCPWVSKVWNTVEKHKQGDYTSIIHGKYSHEETIATSSFAAKYIVVKNIEEAMYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVK+GIANQTTMLK ETE+IGKLV
Sbjct: 263 CDYILGGQLDGSSSTKEDFLEKFKFAVSVGFDPDVDLVKLGIANQTTMLKTETEDIGKLV 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK GVEN+NEHF SFNTICDATQERQDAM K+VE+K+DLILVV
Sbjct: 323 EKTMMRKHGVENINEHFKSFNTICDATQERQDAMNKLVEDKLDLILVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWID+E RIGPGNKI+YKL+HGELVEKEN+LP G ITIG+TSGASTPDK
Sbjct: 383 EIAEMNGIPSYWIDNENRIGPGNKISYKLLHGELVEKENFLPSGPITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKR-EEALQLA 368
VED L KVF+IKR EE LQ+A
Sbjct: 443 VEDALIKVFDIKRKEEVLQMA 463
>gi|82492446|gb|ABB78090.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 3
[Ginkgo biloba]
Length = 474
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/380 (78%), Positives = 337/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD++K LKEN +EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 95 MDQEYTSDVVKTLKENNYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWM 154
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKR+EEM VQ IPV+E K+FDVV+KGDVV+LPAFGAAV EM L+ KNV
Sbjct: 155 TNEIIHNPTVNKRIEEMKVQYIPVDEEGKRFDVVDKGDVVILPAFGAAVHEMQYLSEKNV 214
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +V KHK+GDYTSIIHGKY+HEETVATASFAG YIIVK + EA YV
Sbjct: 215 QIVDTTCPWVSKVWNTVVKHKQGDYTSIIHGKYAHEETVATASFAGTYIIVKTIDEAAYV 274
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G+LNGSS TK FL+KFK AVSKGFDPDV LVKVGIANQTTMLKGETE+IGKLV
Sbjct: 275 CDYILDGKLNGSSGTKAEFLQKFKNAVSKGFDPDVALVKVGIANQTTMLKGETEDIGKLV 334
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM KFGVEN+N+HFISFNTICDATQERQDAM+++V++K+DLILV+
Sbjct: 335 EKTMMHKFGVENINDHFISFNTICDATQERQDAMHQLVKDKLDLILVIGGWNSSNTSHLQ 394
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWIDS++RIGPGN IAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 395 EIAELNGIPSYWIDSKERIGPGNMIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 454
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVLK+VF+IK+EE LQ+A
Sbjct: 455 VEDVLKRVFQIKQEETLQVA 474
>gi|262411021|gb|ACY66876.1| P10Sh086H20 [Saccharum hybrid cultivar R570]
Length = 467
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 304/380 (80%), Positives = 335/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD+IK LKENG +YTWG V VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 88 MSQEYTSDVIKTLKENGNQYTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWL 147
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRL+EM V+ IPV+ G K F+VV +GDVVVLPAFGAAVEEM TLN K V
Sbjct: 148 TNEIIHNPTVNKRLDEMGVEIIPVDAGIKDFNVVEQGDVVVLPAFGAAVEEMYTLNEKKV 207
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASFAGKYIIVKNM EA YV
Sbjct: 208 QIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASFAGKYIIVKNMAEATYV 267
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDVDL VGIANQTTMLKGETEEIGKLV
Sbjct: 268 CDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVDLDMVGIANQTTMLKGETEEIGKLV 327
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKT+M+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDLILV+
Sbjct: 328 EKTIMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDLILVIGGWNSSNTSHLQ 387
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI E GIPSYWIDSE+RI PGN I+YKL HGELVEK NWLP+G ITIG+TSGASTPDK
Sbjct: 388 EIGELSGIPSYWIDSEQRIEPGNMISYKLNHGELVEKVNWLPEGPITIGVTSGASTPDKV 447
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L+KVFEIKR+E LQ+A
Sbjct: 448 VEDALQKVFEIKRQEILQVA 467
>gi|85813153|gb|ABC84344.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ginkgo
biloba]
Length = 474
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/380 (78%), Positives = 336/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD++K LKEN +EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 95 MDQEYTSDVVKTLKENNYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWM 154
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKR+EEM VQ IPV+E K+FDVV+KGDVV+LPAFGAAV EM L+ KNV
Sbjct: 155 TNEIIHNPTVNKRIEEMKVQYIPVDEEGKRFDVVDKGDVVILPAFGAAVHEMQYLSEKNV 214
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK+GDYTSIIHGKY+HEETVATASFAG YIIVK + EA YV
Sbjct: 215 QIVDTTCPWVSKVWNTVEKHKQGDYTSIIHGKYAHEETVATASFAGTYIIVKTIDEAAYV 274
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G+LNGSS TK FL+KFK AVSKGFDP V LVKVGIANQTTMLKGETE+IGKLV
Sbjct: 275 CDYILDGKLNGSSGTKAEFLQKFKNAVSKGFDPHVALVKVGIANQTTMLKGETEDIGKLV 334
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM KFGVEN+N+HFISFNTICDATQERQDAM+++V++K+DLILV+
Sbjct: 335 EKTMMHKFGVENINDHFISFNTICDATQERQDAMHQLVKDKLDLILVIGGWNSSNTSHLQ 394
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWIDSE+RIGPGN IAYKL HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 395 EIAELNGIPSYWIDSEERIGPGNMIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKV 454
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVLK+VF+IK+EE L +A
Sbjct: 455 VEDVLKRVFQIKQEETLPVA 474
>gi|81076565|gb|ABB55395.1| LYTB-like protein precursor-like [Solanum tuberosum]
Length = 462
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 307/381 (80%), Positives = 345/381 (90%), Gaps = 13/381 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQ-FPEEKIW 59
MN+EYTSDIIKKLKENGFEYTWGNV VKLAESYGFCWGVERAVQIAYEARK F + W
Sbjct: 82 MNREYTSDIIKKLKENGFEYTWGNVTVKLAESYGFCWGVERAVQIAYEARKTVFQQRGFW 141
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVN+RLE+M V+ P+EEGKK FDVV+K DVVVLPAFGAAV+EM+ L++KN
Sbjct: 142 ITNEIIHNPTVNRRLEDMDVKKNPLEEGKKNFDVVDKDDVVVLPAFGAAVDEMLVLSDKN 201
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW +VEKHKKG YTSIIHGKY+HEETVATASFAGKYIIVKNM EA Y
Sbjct: 202 VQIVDTTCPWVTKVWNTVEKHKKGAYTSIIHGKYAHEETVATASFAGKYIIVKNMAEATY 261
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSSSTKEAF++KFK AVS+GFDPDVDLVK GIANQTTMLKGET +IGKL
Sbjct: 262 VCDYILGGKLDGSSSTKEAFMQKFKYAVSEGFDPDVDLVKAGIANQTTMLKGETADIGKL 321
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
VE+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+VE+K+DL+LV+
Sbjct: 322 VERTMMQKYGVENVNNHFVSFNTICDATQERQDAMYKLVEQKLDLMLVIGGWNSSNTSHL 381
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LP+G ITIG+TSGASTPDK
Sbjct: 382 QEIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPEGPITIGVTSGASTPDK 441
Query: 348 AVEDVLKKVFEIKREEALQLA 368
VEDVL K+F+IKREEALQLA
Sbjct: 442 VVEDVLIKLFDIKREEALQLA 462
>gi|374639363|gb|AEZ55670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Salvia
miltiorrhiza]
Length = 462
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 297/380 (78%), Positives = 336/380 (88%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++E+TSDIIKKLKENG EYTWGNV VKLAESYGFCWGVERA+QIA+EAR+QFP + +W+
Sbjct: 83 MSEEFTSDIIKKLKENGNEYTWGNVTVKLAESYGFCWGVERAIQIAFEARRQFPSDNMWL 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNPTVNK LE+M VQ IPV EGKK+F+VV++GDVVVLPAFGAAV+EM L+ KNV
Sbjct: 143 TNEMIHNPTVNKMLEDMEVQTIPVNEGKKEFEVVSEGDVVVLPAFGAAVDEMRILSEKNV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +V+KHKK DYTSIIHGKY+HEETVATASFA KYIIVKN+KEA YV
Sbjct: 203 QIVDTTCPWVSKVWNTVDKHKKKDYTSIIHGKYNHEETVATASFARKYIIVKNIKEATYV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG L+GSSST+EAFLEKFK AVSKGFDPD DL KVGIANQTTMLK ETEEIG+L+
Sbjct: 263 CDYILGGGLDGSSSTREAFLEKFKYAVSKGFDPDKDLEKVGIANQTTMLKSETEEIGQLI 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN HF+SFNTICDATQERQDAMYK+VE+KVDLILVV
Sbjct: 323 ERTMMRKYGVENTTNHFMSFNTICDATQERQDAMYKLVEDKVDLILVVGGFNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RGIPSYW+DSEKRIGPGNKI++KL+HGELVEK N+LP G ITIG+TSGASTPD
Sbjct: 383 EIAEFRGIPSYWVDSEKRIGPGNKISHKLLHGELVEKVNFLPDGPITIGVTSGASTPDNV 442
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED+LKKVF +KR+E LQ A
Sbjct: 443 VEDILKKVFALKRDEVLQTA 462
>gi|312281865|dbj|BAJ33798.1| unnamed protein product [Thellungiella halophila]
Length = 466
Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust.
Identities = 305/380 (80%), Positives = 342/380 (90%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDI++ LK NG+ Y+WG+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WI
Sbjct: 87 MNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V+ IPVE+ KKQFDVV+K DVV+LPAFGA V+EM LN+K V
Sbjct: 147 TNEIIHNPTVNKRLEEMDVKIIPVEDSKKQFDVVDKDDVVILPAFGAGVDEMYVLNDKKV 206
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWV+KVW VEKHKKG+YTSIIHGKY+HEET+ATASFAGKYIIVKNMKEA YV
Sbjct: 207 QIVDTTCPWVTKVWNMVEKHKKGEYTSIIHGKYNHEETIATASFAGKYIIVKNMKEANYV 266
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSSTKE F+EKFK AVSKGFDPD DL+KVGIANQTTMLKGETEEIGKL+
Sbjct: 267 CDYILGGQLDGSSSTKEEFMEKFKYAVSKGFDPDKDLIKVGIANQTTMLKGETEEIGKLI 326
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y++VEEK+DL+LVV
Sbjct: 327 ERTMMRKYGVENVNGHFISFNTICDATQERQDAIYELVEEKIDLMLVVGGWNSSNTCHLQ 386
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSGASTPDK
Sbjct: 387 EISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSGASTPDKV 446
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED L KVF+IKREE LQLA
Sbjct: 447 VEDALVKVFDIKREELLQLA 466
>gi|183206805|gb|ACC54561.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
type 2 [Pinus densiflora]
Length = 487
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 297/380 (78%), Positives = 330/380 (86%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD++K LKEN E+TWGNV VKLA+SYGFCWGVERAVQIAYEARKQFP E+IWI
Sbjct: 108 MDQEYTSDLVKTLKENNNEFTWGNVTVKLAKSYGFCWGVERAVQIAYEARKQFPSERIWI 167
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLEEM V +IP+ K+FDVVNKGDVV+LPAFGA+V EM L+ KNV
Sbjct: 168 TNEIIHNPTVNERLEEMDVHSIPIGNEGKRFDVVNKGDVVILPAFGASVHEMQLLSEKNV 227
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASFAG YIIVKN+ EA YV
Sbjct: 228 QIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASFAGTYIIVKNITEARYV 287
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL GEL+GSS TKE FL+KFK AVSKGFDPDVDLVK+GIANQTTMLKGETEEIGKL
Sbjct: 288 CDYILNGELDGSSGTKEEFLKKFKNAVSKGFDPDVDLVKLGIANQTTMLKGETEEIGKLA 347
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D ILVV
Sbjct: 348 EKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDFILVVGGWNSSNTSHLQ 407
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE IPSYWID E+RIGPGNKI +KL HGELVEK++WLP+G ITIGITSGASTPDK
Sbjct: 408 EIAELNDIPSYWIDDEQRIGPGNKITFKLNHGELVEKDHWLPEGPITIGITSGASTPDKV 467
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED LKK+FEIKREE LQ A
Sbjct: 468 VEDALKKIFEIKREEVLQAA 487
>gi|126697262|gb|ABO26588.1| type 2 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase
[Pinus taeda]
Length = 487
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 297/380 (78%), Positives = 331/380 (87%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD++K LKEN E+TWGNV VKLA+SYGFCWGVERAVQIAYEARKQFP E+IWI
Sbjct: 108 MDQEYTSDLVKTLKENNNEFTWGNVTVKLAKSYGFCWGVERAVQIAYEARKQFPVERIWI 167
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLEEM V +IP+ K+FDVVNKGDVV+LPAFGA+V EM L+ KNV
Sbjct: 168 TNEIIHNPTVNERLEEMDVHSIPIGNEGKRFDVVNKGDVVILPAFGASVHEMQLLSEKNV 227
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASFAG YIIVKN+ EA YV
Sbjct: 228 QIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASFAGTYIIVKNITEARYV 287
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL GEL+GSS TKE FL+KFK AVSKGFDPDVDLVK+GIANQTTMLKGETEEIGKL
Sbjct: 288 CDYILNGELDGSSGTKEEFLKKFKNAVSKGFDPDVDLVKLGIANQTTMLKGETEEIGKLA 347
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D ILVV
Sbjct: 348 EKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDFILVVGGWNSSNTSHLQ 407
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE IPSYWID+E+RIGPGNKI +KL HGELVEK++WLP+G ITIGITSGASTPDK
Sbjct: 408 EIAELNDIPSYWIDNEQRIGPGNKITFKLNHGELVEKDHWLPEGPITIGITSGASTPDKV 467
Query: 349 VEDVLKKVFEIKREEALQLA 368
VED LKK+FEIKREE LQ A
Sbjct: 468 VEDALKKIFEIKREEVLQAA 487
>gi|82492444|gb|ABB78089.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 2
[Ginkgo biloba]
Length = 482
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/380 (78%), Positives = 330/380 (86%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
++ EYTSD++K LKEN EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFPEE+IW+
Sbjct: 103 IDSEYTSDVVKTLKENNNEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPEERIWM 162
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VNKRLEEM VQ IP +QFD V GDVV+LPAFGAAV EM L+ KNV
Sbjct: 163 TNEIIHNPAVNKRLEEMKVQYIPSGNEGEQFDAVEIGDVVILPAFGAAVHEMQILSEKNV 222
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEETVATASFAG YIIVKN+ EA YV
Sbjct: 223 QIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVATASFAGTYIIVKNIAEATYV 282
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL GEL+ SS TKE FLEKFK AVSKGF+PDVDLVK+GIANQTTMLKGETE+IGKLV
Sbjct: 283 CDYILNGELDASSGTKEEFLEKFKNAVSKGFNPDVDLVKLGIANQTTMLKGETEDIGKLV 342
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVEN+NEHFISFNTICDATQERQDAM K+V+EK+DLILVV
Sbjct: 343 EKTMMRRFGVENINEHFISFNTICDATQERQDAMDKLVKEKLDLILVVGGWNSSNTSHLQ 402
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GI SYW+D +RIGPGNKIAYKL HGELVE+ENWLP+G ITIG+TSGASTPDKA
Sbjct: 403 EIAELNGISSYWVDGVQRIGPGNKIAYKLNHGELVEEENWLPEGPITIGVTSGASTPDKA 462
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL+KVFEIK+EE LQ+A
Sbjct: 463 VEDVLRKVFEIKQEEVLQIA 482
>gi|224284450|gb|ACN39959.1| unknown [Picea sitchensis]
Length = 485
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/379 (77%), Positives = 332/379 (87%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QEYTSD++K LKEN E+TWG+V VKLA+SYGFCWGVERAVQIAYEARKQFP E+IWI
Sbjct: 106 MDQEYTSDLVKTLKENNNEFTWGDVTVKLAKSYGFCWGVERAVQIAYEARKQFPVERIWI 165
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RLEEM VQ+IPV K+F VV+KGDVV+LPAFGA+V EM L+ KNV
Sbjct: 166 TNEIIHNPTVNERLEEMDVQSIPVGNEGKRFGVVDKGDVVILPAFGASVHEMQLLSEKNV 225
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASFAG YIIVKN+ EA YV
Sbjct: 226 QIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASFAGTYIIVKNITEARYV 285
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL GE +GSS TKE FL+KF+ AVSKGFDPDVDLVK+GIANQTTMLKGETEEIGKL
Sbjct: 286 CDYILNGEFDGSSGTKEEFLKKFENAVSKGFDPDVDLVKLGIANQTTMLKGETEEIGKLA 345
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D ILVV
Sbjct: 346 EKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDFILVVGGWNSSNTSHLQ 405
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWID+E+RIGPGNKI++KL HGELVEK+NWLP G ITIG+TSGASTPDK
Sbjct: 406 EIAELNGIPSYWIDNEQRIGPGNKISFKLNHGELVEKDNWLPSGPITIGVTSGASTPDKV 465
Query: 349 VEDVLKKVFEIKREEALQL 367
VED LK++FEIKREEALQ+
Sbjct: 466 VEDALKRIFEIKREEALQV 484
>gi|402749273|gb|AFQ95412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salvia
miltiorrhiza]
Length = 463
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 342/380 (90%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QE+TSDIIKKLKENG++YTWGNV VKLAESYGFCWGVERAVQIAYEARKQFP E IW+
Sbjct: 84 MSQEFTSDIIKKLKENGYQYTWGNVTVKLAESYGFCWGVERAVQIAYEARKQFPTENIWL 143
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNPTVN+RLEEM V+ IP+ GKK+FDVV+KGDVVVLPAFGAAV+EM L++KNV
Sbjct: 144 TNEVIHNPTVNERLEEMNVKIIPLNNGKKEFDVVDKGDVVVLPAFGAAVDEMRILSDKNV 203
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASFAGK++IVKNM EA YV
Sbjct: 204 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASFAGKFVIVKNMTEATYV 263
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG L+GSSSTKEAFLEKFK A+SKGFDPD D KVGIANQTTMLKGETE+IGKLV
Sbjct: 264 CDYILGGGLDGSSSTKEAFLEKFKFAISKGFDPDKDFEKVGIANQTTMLKGETEDIGKLV 323
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN +HFISFNTICDATQERQDAMYK+V++ VDLILV+
Sbjct: 324 ERTMMRKYGVENATDHFISFNTICDATQERQDAMYKLVDDPVDLILVIGGWNSSNTSHLQ 383
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYW+D+EKRIGPGNKI++KLMHGELVEKENW+P+G +TIG+TSGASTPDK
Sbjct: 384 EISELRGIPSYWVDNEKRIGPGNKISHKLMHGELVEKENWMPEGPVTIGVTSGASTPDKV 443
Query: 349 VEDVLKKVFEIKREEALQLA 368
V+DVL+KVFE+K+ E LQ A
Sbjct: 444 VQDVLEKVFEMKQAEVLQSA 463
>gi|374639361|gb|AEZ55669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Salvia
miltiorrhiza]
Length = 463
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 342/380 (90%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+QE+TSDIIKKLKENG++YTWGNV VKLAESYGFCWGVERAVQIAYEARKQFP E IW+
Sbjct: 84 MSQEFTSDIIKKLKENGYQYTWGNVTVKLAESYGFCWGVERAVQIAYEARKQFPTENIWL 143
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNPTVN+RLEEM V+ IP+ GKK+FDVV+KGDVVVLPAFGAAV+EM L++KNV
Sbjct: 144 TNEVIHNPTVNERLEEMNVKIIPLNNGKKEFDVVDKGDVVVLPAFGAAVDEMRILSDKNV 203
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASFAGK++IVKNM EA YV
Sbjct: 204 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASFAGKFVIVKNMTEATYV 263
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG L+GSSSTKEAFLEKFK A+SKGFDPD D KVGIANQTTMLKGETE+IGKLV
Sbjct: 264 CDYILGGGLDGSSSTKEAFLEKFKFAISKGFDPDKDFEKVGIANQTTMLKGETEDIGKLV 323
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+GVEN +HFISFNTICDATQERQDAMYK+V++ VDLILV+
Sbjct: 324 ERTMMRKYGVENATDHFISFNTICDATQERQDAMYKLVDDPVDLILVIGGWNSSNTSHLQ 383
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+E RGIPSYW+D+EKRIGPGNKI++KLMHGELVEKENW+P+G +TIG+TSGASTPDK
Sbjct: 384 EISELRGIPSYWVDNEKRIGPGNKISHKLMHGELVEKENWMPEGPVTIGVTSGASTPDKV 443
Query: 349 VEDVLKKVFEIKREEALQLA 368
V+DVL+KVFE+K+ E LQ A
Sbjct: 444 VQDVLEKVFEMKQAEVLQSA 463
>gi|393008683|gb|AFN02125.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Huperzia
carinata]
Length = 478
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/378 (76%), Positives = 332/378 (87%), Gaps = 12/378 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M +EYTSD++K L+EN FEYTWG+V VKLAESYGFCWGVERAVQIAYEARKQFP + IWI
Sbjct: 96 MAKEYTSDVVKTLRENNFEYTWGDVTVKLAESYGFCWGVERAVQIAYEARKQFPTDNIWI 155
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V+ IPVE+ K FDVV+KGDVV+LPAFGA+V+EM L+ K V
Sbjct: 156 TNEIIHNPSVNQRIDEMEVKFIPVEKEGKNFDVVSKGDVVILPAFGASVQEMQILDEKKV 215
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKK YTS+IHGKYSHEETVATASFAG YIIVKNM+EA Y+
Sbjct: 216 QIVDTTCPWVSKVWNTVEKHKKATYTSVIHGKYSHEETVATASFAGAYIIVKNMQEASYL 275
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDY+LGG+L+GSSSTKE LEKFK A SKGFDPD DLVKVGIANQTTMLKGETE IGKL+
Sbjct: 276 CDYVLGGQLDGSSSTKEDLLEKFKYATSKGFDPDRDLVKVGIANQTTMLKGETEAIGKLL 335
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVENVN+HF+SFNTICDATQERQDA++K+V+E++DLILVV
Sbjct: 336 EKTMMQKYGVENVNDHFMSFNTICDATQERQDAIHKLVKEELDLILVVGGWNSSNTSHLQ 395
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWID+EKRIGPGNKIA+KL HGELVEKE+WLP+G +TIG+TSGASTPDK
Sbjct: 396 EIAEINGIPSYWIDTEKRIGPGNKIAFKLNHGELVEKEDWLPQGPVTIGVTSGASTPDKV 455
Query: 349 VEDVLKKVFEIKREEALQ 366
VEDVL VF++K EEAL+
Sbjct: 456 VEDVLNTVFQLKSEEALK 473
>gi|126697260|gb|ABO26587.1| type 1 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase
[Pinus taeda]
Length = 485
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/379 (75%), Positives = 331/379 (87%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++EYTSDIIK LKEN EYTWGNV VKLAES+GFCWGVERAVQIAYEARKQFP++K+WI
Sbjct: 106 MDKEYTSDIIKTLKENNNEYTWGNVTVKLAESFGFCWGVERAVQIAYEARKQFPDQKLWI 165
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPAFGAA+ EM L+ K V
Sbjct: 166 TNEIIHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNNDDVVILPAFGAALSEMQILDEKGV 225
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SFAGKYIIVK++KEA YV
Sbjct: 226 KIVDTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSFAGKYIIVKDIKEATYV 285
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDY+L G+L+GSSSTKE FL+KF+KA+S+GFDPD DLVKVGIANQTTMLKGETEEIGKL+
Sbjct: 286 CDYVLAGKLDGSSSTKEEFLKKFEKAISRGFDPDCDLVKVGIANQTTMLKGETEEIGKLL 345
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVE +NEHF+SFNTICDATQERQDAMY +V+EK+DLILVV
Sbjct: 346 EKTMMQKYGVEFINEHFMSFNTICDATQERQDAMYNLVKEKLDLILVVGGWNSSNTSHLQ 405
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G + IGITSGASTPDK
Sbjct: 406 EIAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTGPLKIGITSGASTPDKI 465
Query: 349 VEDVLKKVFEIKREEALQL 367
+ED LK VF++K EEALQ+
Sbjct: 466 LEDTLKVVFKMKDEEALQM 484
>gi|449502429|ref|XP_004161637.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 465
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/379 (75%), Positives = 325/379 (85%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN E+TS+I+ L ENG+++TWG V VKLA +YGFCWGVERAVQ AYEARKQ+P E IWI
Sbjct: 83 MNSEFTSEIVNTLNENGYQFTWGKVTVKLAGAYGFCWGVERAVQFAYEARKQYPSETIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V NIP+EEG K+FDVVN GDVV+LPAFGAAV+E++ LN+K V
Sbjct: 143 TNEIIHNPTVNKRLEEMGVHNIPLEEGNKRFDVVNPGDVVILPAFGAAVDEILVLNDKKV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +V KHKKG+YTSIIHGKY HEET+ATASFAG+YIIVK+M EA V
Sbjct: 203 KIVDTTCPWVSKVWNAVGKHKKGEYTSIIHGKYRHEETIATASFAGRYIIVKDMAEAACV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG E NGS STKE FL+KFK AVSKGFDPD+DL+K+GIANQTTMLKGETEEIGKL+
Sbjct: 263 SDYILGVEHNGSVSTKEEFLKKFKSAVSKGFDPDIDLMKIGIANQTTMLKGETEEIGKLM 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVEN+NEHFISFNTIC+ATQ RQDAMY++V+E VDL+LVV
Sbjct: 323 EKTMMRKYGVENINEHFISFNTICNATQVRQDAMYELVKEDVDLMLVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RG+PSYWIDSE+RIGPGN I+YKL HGEL KENWLP G ITIG+TSGASTPDK
Sbjct: 383 EIAEARGVPSYWIDSEQRIGPGNSISYKLAHGELANKENWLPDGHITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQL 367
VEDVLKKVF+IK + QL
Sbjct: 443 VEDVLKKVFDIKGDGNAQL 461
>gi|449455318|ref|XP_004145400.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
gi|449471527|ref|XP_004153335.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 465
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/379 (75%), Positives = 325/379 (85%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN E+TS+I+ L ENG+++TWG V VKLA +YGFCWGVERAVQ AYEARKQ+P E IWI
Sbjct: 83 MNSEFTSEIVNTLNENGYQFTWGKVTVKLAGAYGFCWGVERAVQFAYEARKQYPSETIWI 142
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLEEM V NIP+EEG K+FDVVN GDVV+LPAFGAAV+E++ LN+K V
Sbjct: 143 TNEIIHNPTVNKRLEEMGVHNIPLEEGNKRFDVVNPGDVVILPAFGAAVDEILVLNDKKV 202
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +V KHKKG+YTSIIHGKY HEET+ATASFAG+YIIVK+M EA V
Sbjct: 203 KIVDTTCPWVSKVWNAVGKHKKGEYTSIIHGKYRHEETIATASFAGRYIIVKDMAEAACV 262
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG E NGS STKE FL+KFK AVSKGFDPD+DL+K+GIANQTTMLKGETEEIGKL+
Sbjct: 263 SDYILGVEHNGSISTKEEFLKKFKSAVSKGFDPDIDLMKIGIANQTTMLKGETEEIGKLM 322
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVEN+NEHFISFNTIC+ATQ RQDAMY++V+E VDL+LVV
Sbjct: 323 EKTMMRKYGVENINEHFISFNTICNATQVRQDAMYELVKEDVDLMLVVGGWNSSNTSHLQ 382
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE RG+PSYWIDSE+RIGPGN I+YKL HGEL KENWLP G ITIG+TSGASTPDK
Sbjct: 383 EIAEARGVPSYWIDSEQRIGPGNSISYKLAHGELANKENWLPDGHITIGVTSGASTPDKV 442
Query: 349 VEDVLKKVFEIKREEALQL 367
VEDVLKKVF+IK + QL
Sbjct: 443 VEDVLKKVFDIKGDGNAQL 461
>gi|82492442|gb|ABB78088.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 1
[Ginkgo biloba]
Length = 487
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/378 (75%), Positives = 331/378 (87%), Gaps = 12/378 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++EYTSDIIKKLKEN EY WG+V V+LA+S+GFCWGVERAVQIAYEARKQFP++K+W+
Sbjct: 108 MDKEYTSDIIKKLKENNNEYAWGDVTVRLAQSFGFCWGVERAVQIAYEARKQFPDQKLWV 167
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL++M +++IPV E K FDVVN DVV+LPAFGAA++EM L+ K V
Sbjct: 168 TNEIIHNPTVNQRLKDMKIEDIPVREEGKVFDVVNSEDVVILPAFGAALQEMQILDEKKV 227
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKK YTS+IHGK HEET AT+SFAGKYIIVK++KEA YV
Sbjct: 228 QIVDTTCPWVSKVWNTVEKHKKESYTSVIHGKQGHEETTATSSFAGKYIIVKDIKEATYV 287
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSSS+KE FL+KFK AVS+GFDPD DLVKVGIANQTTMLKGETEEIGKL+
Sbjct: 288 CDYILGGKLDGSSSSKEEFLKKFKMAVSRGFDPDRDLVKVGIANQTTMLKGETEEIGKLL 347
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVENVNEHF+SFNTICDATQERQDAMY +V+EK+DLILVV
Sbjct: 348 EKTMMQKYGVENVNEHFMSFNTICDATQERQDAMYDLVKEKLDLILVVGGWNSSNTSHLQ 407
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYWIDSEKRIGPGN+IAYKL +GELVEKENWLP G I IGITSGASTPDK
Sbjct: 408 EIAEHSGIPSYWIDSEKRIGPGNRIAYKLSYGELVEKENWLPPGPIKIGITSGASTPDKI 467
Query: 349 VEDVLKKVFEIKREEALQ 366
+EDVL+ VF++K E+ALQ
Sbjct: 468 LEDVLELVFKLKHEDALQ 485
>gi|58761369|gb|AAW82381.1| chloroplast 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase
[Arabidopsis thaliana]
Length = 468
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/382 (75%), Positives = 335/382 (87%), Gaps = 14/382 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDI++ LK NG+ Y+WG+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WI
Sbjct: 87 MNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPAFGA V+EM LN+K
Sbjct: 147 TNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPAFGAGVDEMYVLNDKKH 206
Query: 121 QI-VDTTCPWVS-KVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 178
++ + + +V+ KVW +VEKHKKG+YTS+IHGKY+HEET+ATASFAGKYIIVKNMKEA
Sbjct: 207 RLLISSFLTFVTLKVWNTVEKHKKGEYTSVIHGKYNHEETIATASFAGKYIIVKNMKEAN 266
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIANQTTMLKGETEEIG+
Sbjct: 267 YVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGETEEIGR 326
Query: 239 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV---------- 288
L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL+LVV
Sbjct: 327 LLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDLMLVVGGWNSSNTSH 386
Query: 289 --EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSGASTPD
Sbjct: 387 LQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSGASTPD 446
Query: 347 KAVEDVLKKVFEIKREEALQLA 368
K VED L KVF+IKREE LQLA
Sbjct: 447 KVVEDALVKVFDIKREELLQLA 468
>gi|224285113|gb|ACN40284.1| unknown [Picea sitchensis]
Length = 485
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/378 (75%), Positives = 331/378 (87%), Gaps = 12/378 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++EYTSDIIK LKEN EYTWGNV VKLAES+GFCWGVERAVQIAYEARKQFP++K+WI
Sbjct: 106 MDKEYTSDIIKTLKENNNEYTWGNVTVKLAESFGFCWGVERAVQIAYEARKQFPDQKLWI 165
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPAFGAA+ EM L+ K+V
Sbjct: 166 TNEIIHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNSDDVVILPAFGAALSEMQILDEKSV 225
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SFAGKYIIVK+++EA YV
Sbjct: 226 KIVDTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSFAGKYIIVKDIREAIYV 285
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G+L+GSS TK+ FL+KF+KA+S+GFDPD DLVKVGIANQTTMLKGETEEIGKL+
Sbjct: 286 CDYILAGKLDGSSGTKDEFLKKFEKAISRGFDPDCDLVKVGIANQTTMLKGETEEIGKLL 345
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVE +N+HF+SFNTICDATQERQDAMY +V+EK+DLILVV
Sbjct: 346 EKTMMQKYGVEIINDHFMSFNTICDATQERQDAMYNLVKEKLDLILVVGGWNSSNTSHLQ 405
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G + IGITSGASTPDK
Sbjct: 406 EIAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTGPLKIGITSGASTPDKI 465
Query: 349 VEDVLKKVFEIKREEALQ 366
+EDVLK VF++K EEALQ
Sbjct: 466 LEDVLKVVFKMKDEEALQ 483
>gi|156068994|gb|ABU44490.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Taxus x
media]
Length = 474
Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/380 (78%), Positives = 332/380 (87%), Gaps = 12/380 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++E+ S+++K LK N EYTWG+V VKLAE+YGFCWGVERAVQIAYEA++QFP+ KIW+
Sbjct: 95 MDEEFKSNMVKTLKANNNEYTWGDVTVKLAEAYGFCWGVERAVQIAYEAKRQFPDRKIWL 154
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTV+++ EEMA+Q IPVE KQ DVV +GDVVVLPAFGA+V EM L+ KNV
Sbjct: 155 TNEIIHNPTVSQKFEEMAIQYIPVESEVKQMDVVGEGDVVVLPAFGASVHEMQALSEKNV 214
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHK G YTSIIHGKYSHEETVATASFAGKYIIVKN+KEA YV
Sbjct: 215 QIVDTTCPWVSKVWNTVEKHKTGSYTSIIHGKYSHEETVATASFAGKYIIVKNIKEATYV 274
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL GEL+GSS TKE FLEKFK A+SKGFDPDVDL+K+GIANQTTMLKGETEEIGKL
Sbjct: 275 CDYILNGELDGSSGTKEEFLEKFKYAISKGFDPDVDLLKMGIANQTTMLKGETEEIGKLE 334
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+GVENVN HF SFNTICDATQERQDAM K+V EKVDL+LVV
Sbjct: 335 EKTMMRKYGVENVNNHFTSFNTICDATQERQDAMDKLVTEKVDLMLVVGGWNSSNTSHLQ 394
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE GIPSYW+DSE+RIGPGNKIA+KL HGELVEK+NWLP+G ITIGITSGASTPDK
Sbjct: 395 EIAELNGIPSYWVDSEQRIGPGNKIAFKLNHGELVEKDNWLPEGPITIGITSGASTPDKV 454
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL+KVFEIKREEALQ+A
Sbjct: 455 VEDVLRKVFEIKREEALQVA 474
>gi|183206803|gb|ACC54560.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
type 1 [Pinus densiflora]
Length = 485
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/379 (74%), Positives = 327/379 (86%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M++EYTSDIIK LKEN EYTWGNV VKLAES+GFCWGVERAVQIAYEARKQFP++K+WI
Sbjct: 106 MDKEYTSDIIKTLKENNNEYTWGNVTVKLAESFGFCWGVERAVQIAYEARKQFPDQKLWI 165
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEI+HNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPAFGAA+ EM L+ K V
Sbjct: 166 TNEIMHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNNDDVVILPAFGAALSEMQILDEKGV 225
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+I DTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SFAGKYIIVK++KEA YV
Sbjct: 226 KIADTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSFAGKYIIVKDIKEATYV 285
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G+L+GSSSTKE FL+KF+KA+S+GFDPD DLVKVGIANQTTMLKGETEEIGKL+
Sbjct: 286 CDYILAGKLDGSSSTKEEFLKKFEKAISRGFDPDCDLVKVGIANQTTMLKGETEEIGKLL 345
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVE +NEHF+ FNTICDATQERQDAMY +V+EK+DLILVV
Sbjct: 346 EKTMMQKYGVEFINEHFMCFNTICDATQERQDAMYNLVKEKLDLILVVGGWNSSNTSHLQ 405
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE G P+YWIDSEKRIGPGN+IAYKL HGELV KENWLP G + IGITSGASTPDK
Sbjct: 406 EIAEQNGTPTYWIDSEKRIGPGNRIAYKLSHGELVGKENWLPTGPLKIGITSGASTPDKI 465
Query: 349 VEDVLKKVFEIKREEALQL 367
+ED LK VF++K EEALQ+
Sbjct: 466 LEDTLKVVFKMKDEEALQM 484
>gi|222424827|dbj|BAH20366.1| AT4G34350 [Arabidopsis thaliana]
Length = 358
Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/358 (79%), Positives = 321/358 (89%), Gaps = 12/358 (3%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WITNEIIHNPTVNKRLE+M V+ I
Sbjct: 1 GDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKII 60
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
PVE+ KKQFDVV K DVV+LPAFGA V+EM LN+K VQIVDTTCPWV+KVW +VEKHKK
Sbjct: 61 PVEDSKKQFDVVEKDDVVILPAFGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNTVEKHKK 120
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
G+YTS+IHGKY+HEET+ATASFAGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EK
Sbjct: 121 GEYTSVIHGKYNHEETIATASFAGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEK 180
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
FK A+SKGFDPD DLVKVGIANQTTMLKGETEEIG+L+E TMMRK+GVENV+ HFISFNT
Sbjct: 181 FKYAISKGFDPDNDLVKVGIANQTTMLKGETEEIGRLLETTMMRKYGVENVSGHFISFNT 240
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
ICDATQERQDA+Y++VEEK+DL+LVV EI+E RGIPSYWIDSEKRIGPG
Sbjct: 241 ICDATQERQDAIYELVEEKIDLMLVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPG 300
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
NKIAYKL +GELVEKEN+LPKG ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 301 NKIAYKLHYGELVEKENFLPKGPITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 358
>gi|168011356|ref|XP_001758369.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690404|gb|EDQ76771.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 277/378 (73%), Positives = 327/378 (86%), Gaps = 12/378 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ EYTS+++K LKEN FEYTWGNV VKLA SYGFCWGVERAVQIAYEARKQFPE+K+W+
Sbjct: 103 MSVEYTSNLVKTLKENNFEYTWGNVTVKLANSYGFCWGVERAVQIAYEARKQFPEQKLWL 162
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+++ +M + + V E K F VV++GDVV+LPAFGA+V+EM L++K V
Sbjct: 163 TNEIIHNPTVNQKMTDMGISELSVTENGKDFSVVDQGDVVILPAFGASVQEMQILDDKKV 222
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG YTS+IHGKY+HEETVATASFAGKYII KN+KEA Y+
Sbjct: 223 QIVDTTCPWVSKVWNTVEKHKKGTYTSVIHGKYAHEETVATASFAGKYIIAKNIKEATYI 282
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSS TKE FLEKFK A+SKGFDPD DL KVGIANQTTMLKGETEEIGKL+
Sbjct: 283 CDYILGGKLDGSSGTKEDFLEKFKYAISKGFDPDTDLEKVGIANQTTMLKGETEEIGKLL 342
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+GVENV HF+SFNTICDATQERQDAM+K+VE+KVDLILVV
Sbjct: 343 EKTMMQKYGVENVTNHFMSFNTICDATQERQDAMFKLVEDKVDLILVVGGWNSSNTSHLQ 402
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE +G+PSYWID+E+R+ G +IA+KL HGE VEK++WLP+G IT+GITSGASTPDK
Sbjct: 403 EIAELKGVPSYWIDTEERMLSGKRIAFKLNHGEYVEKDDWLPEGPITVGITSGASTPDKV 462
Query: 349 VEDVLKKVFEIKREEALQ 366
VEDVL+++F+ KREE LQ
Sbjct: 463 VEDVLQRLFQFKREEVLQ 480
>gi|302767946|ref|XP_002967393.1| hypothetical protein SELMODRAFT_270627 [Selaginella moellendorffii]
gi|300165384|gb|EFJ31992.1| hypothetical protein SELMODRAFT_270627 [Selaginella moellendorffii]
Length = 468
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/378 (74%), Positives = 324/378 (85%), Gaps = 13/378 (3%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
++QEY TSD++K LKEN + YTWG+V VKLA SYGFCWGVERAVQIAYEARKQFP++ IW
Sbjct: 90 LDQEYNTSDMLKSLKENDYSYTWGDVTVKLANSYGFCWGVERAVQIAYEARKQFPDQHIW 149
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PAFGA V+EM L K
Sbjct: 150 ITNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPAFGATVQEMQLLAEKK 209
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASFAGKYIIVKNMKEA Y
Sbjct: 210 VQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASFAGKYIIVKNMKEATY 269
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSS TKE LEKFK A SKGFDPD DLV+VGIANQTTMLKGETE+IGKL
Sbjct: 270 VCDYILGGKLDGSSGTKEELLEKFKYATSKGFDPDEDLVRVGIANQTTMLKGETEDIGKL 329
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
+++TMM+K+GVEN N+HF+SFNTICDATQERQDAM+ +V+EK+DL++VV
Sbjct: 330 LQRTMMQKYGVENTNDHFMSFNTICDATQERQDAMFTLVKEKLDLLIVVGGWNSSNTSHL 389
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EI E IPSYWID+E+RIGPGNKIAY+L HGELVEKENWLP G +TIGITSGASTPDK
Sbjct: 390 QEIGEINNIPSYWIDTEERIGPGNKIAYRLNHGELVEKENWLPTGSVTIGITSGASTPDK 449
Query: 348 AVEDVLKKVFEIKREEAL 365
VEDVLK+VF++K++EAL
Sbjct: 450 VVEDVLKQVFQLKKQEAL 467
>gi|302753790|ref|XP_002960319.1| hypothetical protein SELMODRAFT_163924 [Selaginella moellendorffii]
gi|300171258|gb|EFJ37858.1| hypothetical protein SELMODRAFT_163924 [Selaginella moellendorffii]
Length = 468
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/378 (74%), Positives = 324/378 (85%), Gaps = 13/378 (3%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
++QEY TSD++K LKEN + YTWG+V VKLA SYGFCWGVERAVQIAYEARKQFP++ IW
Sbjct: 90 LDQEYNTSDMLKSLKENDYSYTWGDVTVKLANSYGFCWGVERAVQIAYEARKQFPDQHIW 149
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PAFGA V+EM L K
Sbjct: 150 ITNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPAFGATVQEMQLLAEKK 209
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASFAGKYIIVKNMKEA Y
Sbjct: 210 VQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASFAGKYIIVKNMKEATY 269
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSS TKE LEKFK A SKGFDPD DLV+VGIANQTTMLKGETE+IGKL
Sbjct: 270 VCDYILGGKLDGSSGTKEELLEKFKYATSKGFDPDEDLVRVGIANQTTMLKGETEDIGKL 329
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
+++TMM+K+GVEN N+HF+SFNTICDATQERQDAM+ +V+EK+DL++VV
Sbjct: 330 LQRTMMQKYGVENTNDHFMSFNTICDATQERQDAMFTLVKEKLDLLIVVGGWNSSNTSHL 389
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EI E IPSYWID+E+RIGPGNKIAY+L HGELVEKENWLP G +TIGITSGASTPDK
Sbjct: 390 QEIGEINNIPSYWIDTEERIGPGNKIAYRLNHGELVEKENWLPTGPVTIGITSGASTPDK 449
Query: 348 AVEDVLKKVFEIKREEAL 365
VEDVLK+VF++K++EAL
Sbjct: 450 VVEDVLKQVFQLKKQEAL 467
>gi|168048552|ref|XP_001776730.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671879|gb|EDQ58424.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 271/379 (71%), Positives = 321/379 (84%), Gaps = 12/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ EYTSD++K LKEN FEYTWGNV VKLA S+GFCWGVERAVQIAYEARKQFPE+++W+
Sbjct: 96 MDVEYTSDLVKTLKENNFEYTWGNVTVKLANSFGFCWGVERAVQIAYEARKQFPEQQLWL 155
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVN+R+ +M ++ + V E K F V KGDVV+LPAFGA+++EM L+ K V
Sbjct: 156 TNEIIHNPTVNQRMTDMEIKELSVTENGKDFSPVEKGDVVILPAFGASLQEMQILDEKKV 215
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKH+K YTS+IHGKY+HEETVATASFAGKYII KN+KEA Y+
Sbjct: 216 QIVDTTCPWVSKVWNTVEKHRKNIYTSVIHGKYAHEETVATASFAGKYIIAKNIKEATYI 275
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILGG+L+GSS TKE FLEKFK A+SK FDPD DL KVGIANQTTMLKGETEEIGKL+
Sbjct: 276 CDYILGGKLDGSSGTKEEFLEKFKYAISKAFDPDRDLEKVGIANQTTMLKGETEEIGKLL 335
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+GVEN +HF+SFNTICDATQERQDAMYK+V++KVDL+LVV
Sbjct: 336 ERTMMQKYGVENATDHFMSFNTICDATQERQDAMYKLVDDKVDLVLVVGGWNSSNTSHLQ 395
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAE + IPSYWID+ +R+ G +IA+KL HGE VEK+NWLP+G IT+GITSGASTPDK
Sbjct: 396 EIAELKSIPSYWIDTPERMLSGKRIAFKLNHGEYVEKDNWLPEGPITVGITSGASTPDKV 455
Query: 349 VEDVLKKVFEIKREEALQL 367
VEDVLK++F+ KREE L L
Sbjct: 456 VEDVLKRLFQFKREEVLAL 474
>gi|4455180|emb|CAB36712.1| putative protein [Arabidopsis thaliana]
gi|7270385|emb|CAB80152.1| putative protein [Arabidopsis thaliana]
Length = 452
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/382 (72%), Positives = 320/382 (83%), Gaps = 30/382 (7%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN+EYTSDI++ LK NG+ Y+WG+V VKLA++YGFCWGVERAVQIAYEARKQFPEE++WI
Sbjct: 87 MNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYEARKQFPEERLWI 146
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPAFGA V+EM LN+K
Sbjct: 147 TNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPAFGAGVDEMYVLNDKKH 206
Query: 121 QI-VDTTCPWVS-KVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 178
++ + + +V+ KVW +VEKHKKG+YTS+IHGKY+HEET+ATASFAGKYIIVKNMKEA
Sbjct: 207 RLLISSFLTFVTLKVWNTVEKHKKGEYTSVIHGKYNHEETIATASFAGKYIIVKNMKEAN 266
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIANQTTMLKGETEEIG+
Sbjct: 267 YVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGETEEIGR 326
Query: 239 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV---------- 288
L+E TMMRK+GVEN ERQDA+Y++VEEK+DL+LVV
Sbjct: 327 LLETTMMRKYGVEN----------------ERQDAIYELVEEKIDLMLVVGGWNSSNTSH 370
Query: 289 --EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSGASTPD
Sbjct: 371 LQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSGASTPD 430
Query: 347 KAVEDVLKKVFEIKREEALQLA 368
K VED L KVF+IKREE LQLA
Sbjct: 431 KVVEDALVKVFDIKREELLQLA 452
>gi|411119812|ref|ZP_11392188.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoriales cyanobacterium JSC-12]
gi|410709968|gb|EKQ67479.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoriales cyanobacterium JSC-12]
Length = 402
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/372 (63%), Positives = 294/372 (79%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY S +I++++EN + T G+V ++LAE++GFCWGVERAV +AYE R FP E+IWI
Sbjct: 31 MQAEYQSSLIQQIRENHYTLTRGDVTIRLAEAFGFCWGVERAVAMAYETRTHFPNERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM VQ IPVE+G K F VV+KGDVV+LPAFGA+V+EM LN
Sbjct: 91 TNEIIHNPSVNQRLREMNVQFIPVEQGIKNFSVVDKGDVVILPAFGASVQEMQYLNENGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK YTSIIHGKY+HEET+AT+SFAG Y+IV NM+EAEYV
Sbjct: 151 TIVDTTCPWVSKVWNTVEKHKKTQYTSIIHGKYNHEETIATSSFAGTYLIVLNMQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G + AF+ KF +A S+GFDPD DL ++GIANQTTMLKGETE+IGKL+
Sbjct: 211 ANYILSG------GDRNAFMAKFNRACSQGFDPDRDLERIGIANQTTMLKGETEQIGKLL 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TMM+K+G + +N+HF+SFNTICDATQERQDAM+ +V+EK+DL++V+
Sbjct: 265 EHTMMKKYGPDQLNQHFLSFNTICDATQERQDAMFDLVQEKLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA DRGIPSY IDS RI PGN++ +K +H +L NWLP+G ITIG+TSGASTPDK
Sbjct: 325 EIAIDRGIPSYHIDSAARIKPGNQVEHKPLHRDLEVTNNWLPEGPITIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDVL+K+FE+K
Sbjct: 385 VEDVLEKIFELK 396
>gi|297601630|ref|NP_001051168.2| Os03g0732000 [Oryza sativa Japonica Group]
gi|255674867|dbj|BAF13082.2| Os03g0732000 [Oryza sativa Japonica Group]
Length = 482
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/379 (64%), Positives = 304/379 (80%), Gaps = 16/379 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTW--GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKI 58
+N EYTS++I +++ NG EY G V++ LAE++GFC GV+ AV++AY+AR +FP+ ++
Sbjct: 97 INLEYTSELISEMERNGGEYVTMDGLVRLILAEAHGFCLGVDNAVRLAYDARVKFPDRRL 156
Query: 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PAFG V+EMVTLN K
Sbjct: 157 WLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPAFGFTVDEMVTLNRK 216
Query: 119 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 178
NV IVDTTCP V KV E+H KG+YT+IIHGKY+HEETVATASFA KYIIVK++ EA+
Sbjct: 217 NVHIVDTTCPLVLKVVHMTERHIKGNYTTIIHGKYAHEETVATASFADKYIIVKDITEAK 276
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVCDYIL G+L+GSSSTKE FL+KF+ AVS GFDPD+DL +VG+ NQTTMLKGET+EIG
Sbjct: 277 YVCDYILEGQLDGSSSTKEKFLKKFRYAVSPGFDPDIDLERVGVVNQTTMLKGETKEIGI 336
Query: 239 LVEKTMMRKFGVE--NVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
L+E+TMM K+G++ N EHF+ TIC+ATQERQDAMYK+VE++VDLILVV
Sbjct: 337 LIEQTMMSKYGLDQNNKQEHFVRVGTICNATQERQDAMYKLVEKEVDLILVVGGWNSSNT 396
Query: 289 ----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 344
EI E GIPSYW+D E+RIGPGNKI+YK +GELVEK+ WLP G ITIG+TSGAST
Sbjct: 397 SHLQEIGELSGIPSYWVDGEQRIGPGNKISYKQKNGELVEKDKWLPHGAITIGVTSGAST 456
Query: 345 PDKAVEDVLKKVFEIKREE 363
PDK VEDVL+KVFEIKR+E
Sbjct: 457 PDKVVEDVLQKVFEIKRQE 475
>gi|125545617|gb|EAY91756.1| hypothetical protein OsI_13397 [Oryza sativa Indica Group]
Length = 482
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/379 (64%), Positives = 302/379 (79%), Gaps = 16/379 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTW--GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKI 58
+N EYTS++I ++ NG EY G V++ LAE++GFC GV+ AV++AY+AR +FP+ ++
Sbjct: 97 INLEYTSELISGMERNGGEYVTMDGLVRLILAEAHGFCLGVDNAVRLAYDARVKFPDRRL 156
Query: 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PAFG V+EMVTLN K
Sbjct: 157 WLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPAFGFTVDEMVTLNRK 216
Query: 119 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 178
NV IVDTTCP V KV E+H KG+YT+IIHGKY+HEETVATASFA KYIIVK++ EA+
Sbjct: 217 NVHIVDTTCPLVLKVVHMTERHIKGNYTTIIHGKYAHEETVATASFADKYIIVKDITEAK 276
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVCDYIL G+L+GSSSTKE FL+KF+ AVS GFDPD+DL +VG+ NQTTMLKGET+EIG
Sbjct: 277 YVCDYILEGQLDGSSSTKEKFLKKFRDAVSPGFDPDIDLERVGVVNQTTMLKGETKEIGI 336
Query: 239 LVEKTMMRKFGVEN--VNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
L+E+TMM K+G++ EHF+ TIC+ATQERQDAMYK+VE++VDLILVV
Sbjct: 337 LIEQTMMSKYGLDQNKKQEHFVRVGTICNATQERQDAMYKLVEKEVDLILVVGGWNSSNT 396
Query: 289 ----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 344
EI E GIPSYW+D E+RIGPGNKI+YK +GELVEK+ WLP G ITIG+TSGAST
Sbjct: 397 SHLQEIGELSGIPSYWVDGEQRIGPGNKISYKQKNGELVEKDKWLPHGAITIGVTSGAST 456
Query: 345 PDKAVEDVLKKVFEIKREE 363
PDK VEDVL+KVFEIKR+E
Sbjct: 457 PDKVVEDVLQKVFEIKRQE 475
>gi|428208436|ref|YP_007092789.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chroococcidiopsis thermalis PCC 7203]
gi|428010357|gb|AFY88920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chroococcidiopsis thermalis PCC 7203]
Length = 402
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 225/372 (60%), Positives = 291/372 (78%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++++++++NG+ G+V ++LAE++GFCWGVERAV +AYE R+ FP ++IWI
Sbjct: 36 LQSEYQSNLVQQIRDNGYTLQQGDVTIRLAEAFGFCWGVERAVAMAYETRQHFPTQRIWI 95
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V IPV G K F VV GDV +LPAFGA+V+EM L KN
Sbjct: 96 TNEIIHNPSVNQRLQEMQVGFIPVIAGVKDFSVVESGDVAILPAFGASVQEMQLLQEKNC 155
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWV+KVW +VEKHKK +YTSIIHGKY+HEET+AT+SFA KY++V NM +AEYV
Sbjct: 156 KIVDTTCPWVAKVWNTVEKHKKSEYTSIIHGKYNHEETIATSSFANKYLVVLNMAQAEYV 215
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G ++ F+ KF +A S GF+PD DL KVGIANQTTMLK ETE+IGKL
Sbjct: 216 CNYILNG------GNRDEFMAKFSRACSAGFNPDTDLEKVGIANQTTMLKSETEQIGKLF 269
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+G + +N+HFISFNTICDATQERQDAM+++VEEK+DL++V+
Sbjct: 270 ERTMMRKYGPDTLNQHFISFNTICDATQERQDAMFQLVEEKLDLMVVIGGFNSSNTTHLQ 329
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + IPSY IDS RIG N+I ++L+ GE+V ENWLP G+IT+GITSGASTPDK
Sbjct: 330 EIAIEHQIPSYHIDSANRIGTANQIEHRLLSGEIVATENWLPSGKITVGITSGASTPDKV 389
Query: 349 VEDVLKKVFEIK 360
V DV++K+F +K
Sbjct: 390 VADVVEKIFALK 401
>gi|428770960|ref|YP_007162750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
aponinum PCC 10605]
gi|428685239|gb|AFZ54706.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
aponinum PCC 10605]
Length = 398
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/372 (63%), Positives = 289/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+NQEY S++I+ +++N ++ T GNV ++LAE++GFCWGVERAV +AYE R FP EKIWI
Sbjct: 31 LNQEYQSNLIQTIRQNNYQITQGNVTIRLAEAFGFCWGVERAVAMAYETRTHFPTEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VNKRL EM V IPV+ G K F VVN +VV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNKRLREMNVDFIPVDNGVKDFSVVNPKEVVILPAFGASVSEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK +YTSIIHGKY HEETVAT+SFAG Y++V NMKEA+YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKKEYTSIIHGKYKHEETVATSSFAGTYLVVLNMKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G K FL KFK A S+GFDPDVDLV+VGIANQTTMLK ETE IGKL
Sbjct: 211 CNYILNG------GDKLEFLNKFKNAYSEGFDPDVDLVRVGIANQTTMLKSETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+ +N+HF+SFNTICDATQERQDAM +VEEK+DL++V+
Sbjct: 265 EQTMIKKYNPAELNQHFMSFNTICDATQERQDAMLDLVEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + IPSY IDS RI GN+I YK + +L +ENWLP+G+IT+GITSGASTPDK
Sbjct: 325 EIAIENQIPSYHIDSCDRILEGNRIEYKPLDKDLEIQENWLPEGKITVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV++K+F +K
Sbjct: 385 VEDVIEKIFALK 396
>gi|56751440|ref|YP_172141.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 6301]
gi|81298884|ref|YP_399092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 7942]
gi|71152197|sp|Q5N249.1|ISPH_SYNP6 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123557655|sp|Q31S64.1|ISPH_SYNE7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|56686399|dbj|BAD79621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 6301]
gi|81167765|gb|ABB56105.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus
elongatus PCC 7942]
Length = 398
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 219/373 (58%), Positives = 293/373 (78%), Gaps = 18/373 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Y SD+I+ L++NG+ G + ++LAE++GFCWGVERAV IAYE R+ FP+E+IWI
Sbjct: 31 LESAYQSDLIQSLRQNGYRLQRGEITIRLAEAFGFCWGVERAVAIAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L EM+V+ IP E G+K F VV++GDVV+LPAFGA+V+EM L+ K
Sbjct: 91 TNEIIHNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHK+G +TSIIHGKY+HEETVAT+SFA Y++V N+++A+YV
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G ++ F+ +F KA S GFDPD DL ++GIANQTTMLK ETE IGKL
Sbjct: 211 CDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+
Sbjct: 265 ERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK
Sbjct: 325 EIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIKR 361
VEDV++++F+++R
Sbjct: 385 VEDVIERLFDLQR 397
>gi|220907762|ref|YP_002483073.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 7425]
gi|254806902|sp|B8HWD3.1|ISPH_CYAP4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|219864373|gb|ACL44712.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7425]
Length = 405
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/370 (62%), Positives = 289/370 (78%), Gaps = 19/370 (5%)
Query: 4 EYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNE 63
EY S +I++++ENG + G V ++LAE++GFCWGVERAV +AYE R+ FP E+IWITNE
Sbjct: 34 EYQSSLIQQIRENGNRFQRGEVTIQLAEAFGFCWGVERAVALAYETRQHFPTERIWITNE 93
Query: 64 IIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI 122
IIHNP+VN+ L EM V+ IPV E+G+K F VV DVV+LPAFGA+V+EM LN+K +I
Sbjct: 94 IIHNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILPAFGASVQEMQLLNDKGCKI 153
Query: 123 VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCD 182
+DTTCPWVSKVW SVEKHKKG YTSIIHGKY HEET+AT+S+A Y+IV ++KEAEYVC+
Sbjct: 154 MDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYQHEETIATSSYAATYLIVLDLKEAEYVCN 213
Query: 183 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 242
YIL G +E FL KF+ A S FDPD DLV+VGIANQTTMLKGETE+IGKL E+
Sbjct: 214 YILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIANQTTMLKGETEQIGKLFER 267
Query: 243 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EI 290
T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE +DL++V+ EI
Sbjct: 268 TLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEI 327
Query: 291 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 350
+ +R IPSY IDS RIGPGN++ +K +H L KENWLP+G I +GITSGASTPDK V
Sbjct: 328 SIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVS 387
Query: 351 DVLKKVFEIK 360
DVL+K+F +K
Sbjct: 388 DVLEKIFALK 397
>gi|434394564|ref|YP_007129511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeocapsa sp.
PCC 7428]
gi|428266405|gb|AFZ32351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeocapsa sp.
PCC 7428]
Length = 407
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 290/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++++++++N + G+V + LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 LQSEYQSNLVQEIRDNNYTLQRGDVTIYLAKAFGFCWGVERAVAMAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I VE+GKK F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLREMQVGFISVEDGKKDFSVVESGDVVILPAFGASVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY+HEET+AT+SFAGKY+IV N+ +AEYV
Sbjct: 151 TIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYNHEETLATSSFAGKYLIVLNLAQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FL KF +A S GFDPD DL +VGIANQTTMLK ETE+IGKL
Sbjct: 211 ANYILNG------GDKNEFLAKFGRACSAGFDPDRDLERVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +N+HF SFNTICDATQERQDAM+++VEEK+DL++V+
Sbjct: 265 EHTMLKKYGPTELNDHFQSFNTICDATQERQDAMFELVEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS RIGPGN++ ++ + GEL ENWLP+G I IGITSGASTPDK
Sbjct: 325 EIAVEREIPSYHIDSADRIGPGNRVEHRQLSGELAVAENWLPEGAIAIGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V D+++K+F+IK
Sbjct: 385 VADIVQKIFDIK 396
>gi|416384738|ref|ZP_11684681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crocosphaera
watsonii WH 0003]
gi|357264993|gb|EHJ13809.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crocosphaera
watsonii WH 0003]
Length = 402
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/377 (62%), Positives = 294/377 (77%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I++++EN +++ GNV +KLAES+GFCWGVERAV +AYE R+ FP+EKIWI
Sbjct: 31 MNTEYQSSLIQQIRENNYQWQEGNVTIKLAESFGFCWGVERAVAMAYETRQHFPQEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G K F VVN GDVV+LPAFGA+V EM LN++N
Sbjct: 91 TNEIIHNPSVNQRLLEMNVGFIQVINGSKDFSVVNTGDVVILPAFGASVTEMKLLNDRNC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW+SVE+HKK +YTSIIHGKY HEETVAT+SFAG Y++V N+KEA+YV
Sbjct: 151 VIVDTTCPWVSKVWSSVERHKKKEYTSIIHGKYRHEETVATSSFAGTYLVVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYI+ G KE FL+KFK A S+GFDPD DLVK+G+ANQTTMLK ETE+IGKL
Sbjct: 211 CDYIVHG------GDKEEFLDKFKNAHSEGFDPDKDLVKLGVANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE V+L++V+
Sbjct: 265 ESTLLKKYGPTQLNQHFMSFNTICDATQERQDAMLNLVEEDVNLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+ +RGIPSY IDS++RI GNKI +K + + +ENWLP+GQI +G+TSGASTPDK
Sbjct: 325 EISIERGIPSYHIDSDQRILQGNKIEHKPLEKVIETQENWLPEGQIIVGVTSGASTPDKI 384
Query: 349 VEDVLKKVFEIKREEAL 365
VE V++++FE K L
Sbjct: 385 VEAVIERIFEEKNAMVL 401
>gi|126660191|ref|ZP_01731309.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
CCY0110]
gi|126618556|gb|EAZ89307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
CCY0110]
Length = 402
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/377 (63%), Positives = 290/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+K++EN +++ G+V +KLAE++GFCWGVERAV +AYE R+ FP+EKIWI
Sbjct: 31 MNTEYQSSLIQKIRENNYQWQEGDVTIKLAEAFGFCWGVERAVAMAYETRQHFPQEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLLEMNVGFIEVVNGNKNFSVVETGDVVILPAFGASVTEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY HEETVAT+SFAG Y++V N KEA+YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYRHEETVATSSFAGTYLVVLNFKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G K+ FLEKFK A S+GF+PD DL+++GIANQTTMLK ETE+IGKL
Sbjct: 211 CDYILNG------GNKDEFLEKFKNAHSEGFEPDKDLMRLGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +NEHF+SFNTICDATQERQDAM +V+E VDL++V+
Sbjct: 265 ETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVKEDVDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+ ++GI SY IDSEKRI PGNKI +K + E+ KENWLP G+I +G+TSGASTPDK
Sbjct: 325 EISIEKGIDSYHIDSEKRILPGNKIEHKPLEKEIKTKENWLPDGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VE V+K +FE K+ L
Sbjct: 385 VEAVIKCIFEEKKANIL 401
>gi|428300713|ref|YP_007139019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 6303]
gi|428237257|gb|AFZ03047.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 6303]
Length = 402
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 287/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY SD+I++++ + GNV ++LA+++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LQSEYQSDLIQEIRHQNYTLKRGNVTIRLAQAFGFCWGVERAVAMAYETRKHFPTEQIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM VQ IP+ G K F VV GDVV+LPAFGA+V+EM LN KN
Sbjct: 91 TNEIIHNPSVNQRLREMHVQFIPMVAGNKDFSVVGSGDVVILPAFGASVQEMQILNEKNC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKKG YTSIIHGKY+HEET+AT+SFAGKY+IV NMK+AEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKGAYTSIIHGKYAHEETIATSSFAGKYLIVLNMKQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K F+ KF + S GFDPD+DL +VGIANQTTMLKGETEEIGKL
Sbjct: 211 ANYILNG------GDKNEFMAKFSNSFSSGFDPDIDLERVGIANQTTMLKGETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G +N+N+HF SFNTICDATQERQDAM+++VEEK DL++V+
Sbjct: 265 ERTMIKKYGPQNLNQHFQSFNTICDATQERQDAMFELVEEKADLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R +PSY ID +RI + I ++ ++GELV E WLP G+I +GITSGASTPDK
Sbjct: 325 EIAVERQLPSYHIDCVERIKSRDAIEHQQLNGELVITEKWLPDGEIIVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV+ ++F +K
Sbjct: 385 VEDVINRIFALK 396
>gi|428215092|ref|YP_007088236.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoria acuminata PCC 6304]
gi|428003473|gb|AFY84316.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoria acuminata PCC 6304]
Length = 401
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/372 (62%), Positives = 286/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN Y S +I++++EN + T G V ++LA+++GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 31 MNSVYQSPLIQQIRENNYTLTRGEVTIRLAQAFGFCWGVERAVAIAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ ++EM V+ IPV+EGKK F+VV GDVV+LPAFGA V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHIQEMNVEFIPVDEGKKDFEVVQAGDVVILPAFGATVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKKG+YTSIIHGKY HEET+AT+SFAG Y+IV NM EAEYV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKGNYTSIIHGKYKHEETLATSSFAGTYLIVLNMAEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K F+ KF KAVS GFDPD DL +VGIANQTTMLK ETE++GKL
Sbjct: 211 ANYILKG------GDKAEFMAKFSKAVSSGFDPDRDLEQVGIANQTTMLKSETEQMGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF++FNTICDATQERQDAM +VE++VD I+V+
Sbjct: 265 ERTMMKKYGPAALNQHFLAFNTICDATQERQDAMLDLVEDEVDAIVVIGGYNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA DRGIPSY IDS RI PGN+I +K ++ EL ENWLP G + IG+TSGASTPDK
Sbjct: 325 QIAIDRGIPSYHIDSASRILPGNRIEHKPLYQELEIAENWLPPGPLVIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+ ++K+F K
Sbjct: 385 VEEAIEKIFASK 396
>gi|307153041|ref|YP_003888425.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7822]
gi|306983269|gb|ADN15150.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7822]
Length = 401
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/372 (62%), Positives = 287/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I +++ N + T G+V ++LAE++GFCWGVERAV ++YE R+ FP ++IW+
Sbjct: 31 MNSEYQSSLITEIRNNNYRITRGDVTIRLAEAFGFCWGVERAVAMSYETRQHFPSQRIWL 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNP+VN+RL EM V+ IPV EG+K F VV DVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEVIHNPSVNQRLREMKVEFIPVIEGQKDFSVVEGNDVVILPAFGASVSEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWV+KVW SVEKHKK YTSIIHGKY HEETVAT+SFAG Y+IV NM++AEYV
Sbjct: 151 TIVDTTCPWVAKVWNSVEKHKKRSYTSIIHGKYKHEETVATSSFAGTYLIVLNMEQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G K+ FL KFKKA S GFDPDVDL ++GIANQTTMLK ETEEIGKL
Sbjct: 211 CNYILNG------GDKQEFLAKFKKAYSAGFDPDVDLERIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++KFG +NEHF+SFNTICDATQERQDAM+ +V+E++DL++VV
Sbjct: 265 ERTMLKKFGPTVLNEHFMSFNTICDATQERQDAMFDLVKEELDLMVVVGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI + GI SY IDS RIGPGN+I +K + +L KENWLP G++ IG+TSGASTPD
Sbjct: 325 EIPINEGIVSYHIDSASRIGPGNRIEHKPLLKDLEVKENWLPDGKVVIGVTSGASTPDIV 384
Query: 349 VEDVLKKVFEIK 360
VE VL+K+FEIK
Sbjct: 385 VEQVLEKIFEIK 396
>gi|300864234|ref|ZP_07109117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
sp. PCC 6506]
gi|300337771|emb|CBN54263.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
sp. PCC 6506]
Length = 397
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 290/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M Y S +I++++EN + G+V ++LA+++GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 31 MQSAYQSSLIQQIRENNYTLQRGDVTIRLAQAFGFCWGVERAVAIAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V+ IPVE+ +K F VV++GDVV+LPAFGA+V+EM TLN+K
Sbjct: 91 TNEIIHNPSVNQHLVDMQVEFIPVEKSEKDFSVVDRGDVVILPAFGASVQEMQTLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK TSIIHGKY+HEETVAT+SFAGKY+IV N++EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKKVCTSIIHGKYNHEETVATSSFAGKYLIVLNLREAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G +E FL KF KA S GFDPD DL +VGIANQTTMLK ETE+IGKL
Sbjct: 211 CNYILNG------GDREEFLAKFSKACSAGFDPDRDLEQVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRK+G + +NEHF SFNTICDATQERQDAM+ +VEEK+DL+LV+
Sbjct: 265 EKTMMRKYGPDKLNEHFQSFNTICDATQERQDAMFSLVEEKLDLMLVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E+A +R +PSY ID+ +RI N+I +K + +L +NWLP G+I +G+TSGASTPDK
Sbjct: 325 EMAVERKLPSYHIDAAERILANNRIEHKPLGSDLAIADNWLPTGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED +K++FE+K
Sbjct: 385 VEDAIKRIFEMK 396
>gi|427728356|ref|YP_007074593.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Nostoc
sp. PCC 7524]
gi|427364275|gb|AFY46996.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Nostoc
sp. PCC 7524]
Length = 402
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 292/372 (78%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LQSEYQSNLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN R++EM V IPV+ GKK F VV DVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNHRMQEMQVGFIPVDGGKKDFSVVGNKDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV
Sbjct: 151 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 ADYILHG------GDREEFLQKFAKACSAGFDPDQDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V++K+DL++V+
Sbjct: 265 ERTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVKDKLDLMIVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+I+++RG+PSY IDS +RI I ++ + G+LV ENWLP+G+I +G+TSGASTPDK
Sbjct: 325 QISQERGLPSYHIDSVERIKSRTSIEHRQLTGDLVISENWLPEGEIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED+++K+F +K
Sbjct: 385 VEDIIEKIFTLK 396
>gi|428200976|ref|YP_007079565.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pleurocapsa sp. PCC 7327]
gi|427978408|gb|AFY76008.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pleurocapsa sp. PCC 7327]
Length = 402
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S++I++++ N + G V ++LAE++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 LNTEYQSNLIQEIRHNNYRLQRGEVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V I V +GKK F V GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLQEMEVGFISVVDGKKDFSAVESGDVVILPAFGASVAEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY+HEET+AT+SFAG Y++V N+++A YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKRDYTSIIHGKYNHEETIATSSFAGTYLVVLNLEQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G +E FL KFK A S+GFDPD DL ++GIANQTTMLK ETE+IGKL
Sbjct: 211 CDYILNG------GNREEFLTKFKNAYSEGFDPDRDLEQIGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G ++ HF+SFNTICDATQERQDAM+ +VEE + L+LV+
Sbjct: 265 ERTMLKKYGPTELDRHFMSFNTICDATQERQDAMFNLVEENLTLMLVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +RGIPSY IDS RIGPGN+I +K + +L ENWLP G I +G+TSGASTPDK
Sbjct: 325 EIAIERGIPSYHIDSAARIGPGNRIEHKPLGKDLEVTENWLPDGSIVVGVTSGASTPDKI 384
Query: 349 VEDVLKKVFEIK 360
VE+ ++K+FE+K
Sbjct: 385 VEEAIEKIFELK 396
>gi|428313091|ref|YP_007124068.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Microcoleus sp. PCC 7113]
gi|428254703|gb|AFZ20662.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Microcoleus sp. PCC 7113]
Length = 401
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/372 (60%), Positives = 288/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I++++ N + G V + LAE++GFCWGVERAV +AYEAR+ FP E+IW+
Sbjct: 31 LQSEYQSNLIQEIRSNNYRLQRGEVTILLAEAFGFCWGVERAVAMAYEARQHFPTERIWM 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V IPV+ GKK F VV+ GDVV+LPAFGA+V+EM LN+KN
Sbjct: 91 TNEIIHNPSVNQRLQEMEVGFIPVQGGKKDFSVVDSGDVVILPAFGASVQEMQLLNDKNC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY++V N+KEAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKKDYTSIIHGKYKHEETVATSSFAGKYLVVLNLKEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G ++ F+ KF +A S GFDPD DL ++GIANQTTMLK ETE+IGKL
Sbjct: 211 ADYILHG------GNRDEFMTKFSRACSSGFDPDRDLEQIGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G ++N HF SFNTICDATQERQDAM +VE+K+DL++V+
Sbjct: 265 ERTMMKKYGPTDLNNHFHSFNTICDATQERQDAMLGLVEQKLDLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +RGIPSY IDS RIG N++ +K + +L +NWLP G+I +G+TSGASTPDK
Sbjct: 325 QIAIERGIPSYHIDSAARIGSENQVEHKPLGRDLEMTQNWLPAGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED ++K+F +K
Sbjct: 385 VEDAIEKIFALK 396
>gi|434402704|ref|YP_007145589.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cylindrospermum stagnale PCC 7417]
gi|428256959|gb|AFZ22909.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cylindrospermum stagnale PCC 7417]
Length = 402
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/372 (61%), Positives = 288/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY SD+I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 LQSEYQSDLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V+ IPV+ KK F VV GDVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNQRMQEMEVEFIPVDAHKKDFSVVTTGDVVILPAFGASVQEMQILHDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY+IV N+ EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKVDYTSIIHGKYKHEETVATSSFAGKYLIVLNLSEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E FL KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 ANYILNG------GNREEFLAKFPKACSAGFDPDQDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF SFNTICDATQERQDA+ +V++ +DL++V+
Sbjct: 265 ERTMMQKYGPTELNQHFQSFNTICDATQERQDAILDLVQQNLDLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA DRGIPSY ID +RI GN I ++ + G+LV ENWLP G IT+GITSGASTPDK
Sbjct: 325 QIAFDRGIPSYHIDVVERIKSGNAIEHRQLKGDLVITENWLPAGNITVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV++K+F +K
Sbjct: 385 VEDVIEKIFVLK 396
>gi|427713930|ref|YP_007062554.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 6312]
gi|427378059|gb|AFY62011.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 6312]
Length = 411
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/372 (61%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+ ++ NG+ + G V ++LAE++GFCWGVERAV +AYE R+ FP ++IWI
Sbjct: 31 LQGEYQSNLIQSIRNNGYVWQEGEVTIRLAEAFGFCWGVERAVALAYETRQHFPTQRIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL +MAV+ IPV K F V GDVV+LPAFGA+V+EM LN +
Sbjct: 91 TNEIIHNPSVNQRLRDMAVEFIPVVPDGKDFSEVGPGDVVILPAFGASVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKKG YTSIIHGKY+HEETVAT+SFAG Y+I+ NM EAEYV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYNHEETVATSSFAGTYLILLNMDEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G + FL KF+ A S GFDPD DLV++GIANQTTMLKGETE++GKL
Sbjct: 211 CDYILNG------GDRVEFLAKFQNAYSLGFDPDRDLVRLGIANQTTMLKGETEQMGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E T++RK+G + +N HF+SFNTICDATQERQDAM+K+VEE +DLI+V+
Sbjct: 265 EHTLIRKYGPDQINHHFLSFNTICDATQERQDAMFKLVEEPLDLIVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + IPSY ID+ +RIGPGN++ +K + +L ENWLP G +TIGITSGASTPDK
Sbjct: 325 EIAVEWNIPSYHIDAAERIGPGNRVEHKPLKQDLEVTENWLPPGPLTIGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V DVL+++F K
Sbjct: 385 VADVLERIFSFK 396
>gi|354568737|ref|ZP_08987899.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella sp.
JSC-11]
gi|353539542|gb|EHC09026.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella sp.
JSC-11]
Length = 402
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 287/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ N + T G+V ++LAE++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LQSEYQSQLIQQIRNNNYTLTRGDVTIRLAEAFGFCWGVERAVAMAYETRKHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R+ EM V+ IPV GKK F +V GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQRMREMNVEFIPVTAGKKDFAIVETGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY HEET+AT+SFAGKY+IV N+KEAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKREYTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E FL KF KA S GFDPD DL +GIANQTTMLK ETE+IGKL
Sbjct: 211 ANYILHG------GNREEFLAKFSKACSAGFDPDKDLEMIGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TMM+K+G N+N+HF SFNTICDATQERQDAM ++VE+++DL++V+
Sbjct: 265 EHTMMQKYGPANLNDHFQSFNTICDATQERQDAMLELVEKQLDLMIVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +RGI SY IDS RI N+I ++L++G L NWLP G+I IG+TSGASTPDK
Sbjct: 325 QIAFERGISSYHIDSVDRILSENRIEHRLLNGNLEITNNWLPDGEIVIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV++K+FE+K
Sbjct: 385 VEDVIEKIFELK 396
>gi|298490498|ref|YP_003720675.1| hydroxymethylbutenyl pyrophosphate reductase ['Nostoc azollae'
0708]
gi|298232416|gb|ADI63552.1| hydroxymethylbutenyl pyrophosphate reductase ['Nostoc azollae'
0708]
Length = 398
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 291/372 (78%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + GNV ++LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 LQSEYQSNLIQEIRDRNYILQRGNVTIRLAQAFGFCWGVERAVAMAYETRQHFPKERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM VQ IPVE KK F ++++GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQRMQEMQVQFIPVEANKKDFSLIDQGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEETVAT+SFAGKY+IV N++EAEYV
Sbjct: 151 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G+ +E FL KF KA S GFDP+ DL +VGIANQTTMLKGETE+I KL
Sbjct: 211 INYILNGD------KREEFLAKFAKACSAGFDPEKDLERVGIANQTTMLKGETEKIAKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+G +N+HF SFNTICDATQERQDAM ++VE +DL++V+
Sbjct: 265 EKTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVENNLDLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA R IPSY ID+ +RI GN I ++ + GEL+ ENWLP +I +GITSGASTPDK
Sbjct: 325 QIAFGRNIPSYHIDAVERIKSGNAIEHRQLTGELITTENWLPPREIVVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED+++++F +K
Sbjct: 385 VEDIIERIFTLK 396
>gi|67921533|ref|ZP_00515051.1| LytB protein [Crocosphaera watsonii WH 8501]
gi|67856645|gb|EAM51886.1| LytB protein [Crocosphaera watsonii WH 8501]
Length = 402
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/372 (62%), Positives = 291/372 (78%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I++++EN +++ GNV +KLAES+GFCWGVERAV +AYE + FP+EKIWI
Sbjct: 31 MNTEYQSSLIQQIRENNYQWQEGNVTIKLAESFGFCWGVERAVAMAYETGQHFPQEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G K F VVN GDVV+LPAFGA+V EM LN++N
Sbjct: 91 TNEIIHNPSVNQRLLEMNVGFIQVINGSKDFSVVNTGDVVILPAFGASVTEMKLLNDRNC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW+SVE+HKK +YTSIIHGKY HEETVAT+SFAG Y++V N+KEA+YV
Sbjct: 151 VIVDTTCPWVSKVWSSVERHKKKEYTSIIHGKYRHEETVATSSFAGTYLVVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYI+ G KE FL+KFK A S+GFDPD DLVK+G+ANQTTMLK ETE+IGKL
Sbjct: 211 CDYIVHG------GDKEEFLDKFKNAHSEGFDPDKDLVKLGVANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE VDL++V+
Sbjct: 265 ESTLLKKYGPTQLNQHFMSFNTICDATQERQDAMLNLVEEDVDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+ +RGI SY IDS++RI GNKI +K + + +ENWLP+GQI +G+TSGASTPDK
Sbjct: 325 EISIERGILSYHIDSDQRILQGNKIEHKPLEKVIETQENWLPEGQILVGVTSGASTPDKI 384
Query: 349 VEDVLKKVFEIK 360
VE V++++FE K
Sbjct: 385 VEAVIERIFEEK 396
>gi|359458726|ref|ZP_09247289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
sp. CCMEE 5410]
Length = 415
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/379 (59%), Positives = 293/379 (77%), Gaps = 15/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ NG+ G+V + LAE++GFCWGVERA+ +AYE R+QFP+E+IWI
Sbjct: 31 LQSEYNSKLIQQIRNNGYRLQQGDVTIHLAEAFGFCWGVERAIALAYETRRQFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP+VNK L +M V+ IPV+ +G+K F VV + DVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNKNLRDMKVEFIPVQPDGQKDFTVVGQNDVVILPAFGASVQEMQLLHDKG 150
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
I+DTTCPWVSKVWTSVEKHKKG YTSIIHGKY HEET+AT+SFAG Y+I+ N++EAEY
Sbjct: 151 CTIMDTTCPWVSKVWTSVEKHKKGAYTSIIHGKYKHEETIATSSFAGTYLILLNLEEAEY 210
Query: 180 VCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 237
V DYIL G+ + A F+ KF A S GFDP+ DL +VGIANQTTMLKGETE+IG
Sbjct: 211 VADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIG 270
Query: 238 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV--------- 288
KL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E +DL++V+
Sbjct: 271 KLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTT 330
Query: 289 ---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
EI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWLPKG + IG+TSGASTP
Sbjct: 331 HLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPKGPLAIGVTSGASTP 390
Query: 346 DKAVEDVLKKVFEIKREEA 364
DK V D+++K+F IK A
Sbjct: 391 DKVVSDIVEKIFSIKSASA 409
>gi|75909159|ref|YP_323455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
variabilis ATCC 29413]
gi|123609130|sp|Q3M8X6.1|ISPH_ANAVT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|75702884|gb|ABA22560.1| LytB protein [Anabaena variabilis ATCC 29413]
Length = 402
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/377 (59%), Positives = 290/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ K
Sbjct: 91 TNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 ADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+
Sbjct: 265 EHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK
Sbjct: 325 QISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VEDV++K+F +K A+
Sbjct: 385 VEDVIEKIFALKATTAV 401
>gi|17228480|ref|NP_485028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7120]
gi|20138568|sp|P58674.1|ISPH_ANASP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|17130331|dbj|BAB72942.1| all0985 [Nostoc sp. PCC 7120]
Length = 402
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/377 (59%), Positives = 290/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ K
Sbjct: 91 TNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 ADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+
Sbjct: 265 EHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK
Sbjct: 325 QISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VEDV++K+F +K A+
Sbjct: 385 VEDVIEKIFALKATAAV 401
>gi|428226838|ref|YP_007110935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Geitlerinema
sp. PCC 7407]
gi|427986739|gb|AFY67883.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Geitlerinema
sp. PCC 7407]
Length = 402
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 288/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++N ++ G V ++LAE++GFCWGVERAV +AYE R+ FP E++WI
Sbjct: 31 LQSEYQSNLIQEIRDNHYQLQRGEVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN RL EM V IPVE+G+K F +V GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNNRLREMEVGFIPVEQGQKDFSIVAPGDVVILPAFGASVQEMQVLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK YTSIIHGKY+HEET+AT+SFAGKY++V NM EA+YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKVQYTSIIHGKYNHEETIATSSFAGKYLVVLNMAEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
YIL G ++AF+ KF K+ S GFDPD DL +VGIANQTTMLK ETE++GKL
Sbjct: 211 THYILHG------GDRDAFMTKFAKSCSAGFDPDRDLERVGIANQTTMLKSETEQVGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G EN+NEHF SFNTICDATQERQDAM ++VEEK+DL++V+
Sbjct: 265 ERTMMQKYGPENLNEHFQSFNTICDATQERQDAMLQLVEEKLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RIGPGN++ +K + +L WLP+G I +G+TSGASTPDK
Sbjct: 325 EIAVERHIPSYHIDSAERIGPGNQVEHKPLERDLEIATPWLPEGPIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V +V++K+F +K
Sbjct: 385 VSEVIEKIFALK 396
>gi|158338063|ref|YP_001519239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
marina MBIC11017]
gi|189045802|sp|B0C4N8.1|ISPH_ACAM1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|158308304|gb|ABW29921.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
marina MBIC11017]
Length = 415
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/379 (58%), Positives = 292/379 (77%), Gaps = 15/379 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ NG+ G+V + LAE++GFCWGVERA+ +AYE R+QFP+E+IWI
Sbjct: 31 LQSEYNSKLIQQIRNNGYRLQQGDVTIHLAEAFGFCWGVERAIALAYETRRQFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP+VNK L +M V+ IPV+ +G+K F VV + DVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNKNLRDMKVEFIPVQPDGQKDFTVVGQNDVVILPAFGASVQEMQLLHDKG 150
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
I+DTTCPWVSKVWTSVEKHKKG YTSIIHGKY HEET+AT+SFAG Y+++ N++EAEY
Sbjct: 151 CTIMDTTCPWVSKVWTSVEKHKKGSYTSIIHGKYKHEETIATSSFAGTYLVLLNLEEAEY 210
Query: 180 VCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 237
V DYIL G+ + A F+ KF A S GFDP+ DL +VGIANQTTMLKGETE+IG
Sbjct: 211 VADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIG 270
Query: 238 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV--------- 288
KL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E +DL++V+
Sbjct: 271 KLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTT 330
Query: 289 ---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
EI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWLP G + IG+TSGASTP
Sbjct: 331 HLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTP 390
Query: 346 DKAVEDVLKKVFEIKREEA 364
DK V D+++K+F IK A
Sbjct: 391 DKVVSDIVEKIFSIKSASA 409
>gi|282895457|ref|ZP_06303594.1| LytB protein [Raphidiopsis brookii D9]
gi|281199490|gb|EFA74353.1| LytB protein [Raphidiopsis brookii D9]
Length = 415
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/372 (60%), Positives = 289/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ + + GN ++LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 49 LQSEYESSLIQEIRNSNYTIKKGNTTIRLAQAFGFCWGVERAVAMAYETRQHFPKERIWI 108
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V IPV KK F VV +GDVV+LPAFGA+V+EM L++K+
Sbjct: 109 TNEIIHNPSVNQRMQEMGVGFIPVTANKKDFSVVEQGDVVILPAFGASVQEMQILHDKSC 168
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG++TSIIHGKY HEETVAT+SFAGKY+IV N+KEAEYV
Sbjct: 169 QIVDTTCPWVSKVWNTVEKHKKGEFTSIIHGKYKHEETVATSSFAGKYLIVLNLKEAEYV 228
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E FL KF KA S GFDPD DL KVGIANQTTMLKGETE+IGK+
Sbjct: 229 SNYILHG------GDREEFLTKFAKACSAGFDPDKDLEKVGIANQTTMLKGETEQIGKIF 282
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMM+K+G+ +N HF SFNTICDATQERQDAM ++VE+K+DLI+V+
Sbjct: 283 EKTMMQKYGILALNNHFQSFNTICDATQERQDAMLELVEDKLDLIIVIGGFNSSNTTQLQ 342
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +R IPSY IDS RI P N I ++ ++GE+ +NWLP G+ +G+TSGASTPDK
Sbjct: 343 QIAINRNIPSYHIDSVDRIKPSNAIEHRQLNGEIAITKNWLPIGETIVGVTSGASTPDKV 402
Query: 349 VEDVLKKVFEIK 360
VED+++K+F +K
Sbjct: 403 VEDIIEKIFSLK 414
>gi|440681832|ref|YP_007156627.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
cylindrica PCC 7122]
gi|428678951|gb|AFZ57717.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
cylindrica PCC 7122]
Length = 410
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 288/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + GNV ++LA+++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 42 LQSEYQSNLIQQIRDRNYTLQRGNVTIRLAQAFGFCWGVERAVAMAYETRQHFPTERIWI 101
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R+++M V+ IPVE KK F +V+ GDVV+LPAFGA+++EM LN+K
Sbjct: 102 TNEIIHNPSVNQRMQDMEVKFIPVEANKKDFSIVDTGDVVILPAFGASIQEMQILNDKGC 161
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEETVAT+SFAGKY+IV N++EAEYV
Sbjct: 162 QIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAEYV 221
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL KF KA S GFDPD DL +VGIANQTTMLK +TE+IGK+
Sbjct: 222 TDYILNG------GNREEFLAKFAKACSAGFDPDKDLERVGIANQTTMLKDDTEKIGKMF 275
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+ +N+HF +FNTICDATQERQDAM ++VE+ +DL++V+
Sbjct: 276 ERTMMQKYSPTELNQHFQNFNTICDATQERQDAMLELVEQNLDLMVVIGGFNSSNTTQLQ 335
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA DR IPSY ID +RI N I ++ + G+LV ENWLP G+I +GITSGASTPDK
Sbjct: 336 QIAFDRTIPSYHIDCVERIQSTNAIEHRQLTGDLVITENWLPAGEIVVGITSGASTPDKV 395
Query: 349 VEDVLKKVFEIK 360
VED+++K+F +K
Sbjct: 396 VEDIIEKIFALK 407
>gi|334117044|ref|ZP_08491136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcoleus
vaginatus FGP-2]
gi|333461864|gb|EGK90469.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcoleus
vaginatus FGP-2]
Length = 401
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 282/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M Y S +I+++++N + G V ++LA+++GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 31 MQTAYQSSLIQQIRDNNYRLERGAVTIRLAQAFGFCWGVERAVAIAYETRQHFPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V I VE+G+K F VV+ GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLRDMEVGFISVEKGQKDFSVVDSGDVVILPAFGASVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK +YTSIIHG+Y HEETVAT+SFA KY+IV N +EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKRNYTSIIHGQYKHEETVATSSFADKYLIVLNFQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G ++ F+ KF KA S GFDPDVDL VGIANQTTMLK ETE IGKL
Sbjct: 211 SNYILHG------GDRDEFIAKFSKAYSAGFDPDVDLESVGIANQTTMLKTETENIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTMMRKFG EN+NEHF SFNTICDATQERQDAM +VEEK+DL+LV+
Sbjct: 265 EKTMMRKFGPENLNEHFQSFNTICDATQERQDAMLSLVEEKLDLMLVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA D+ +PSY ID +RI PGN+I +K + G+LV E WLP G+I +G+TSGASTPDK
Sbjct: 325 EIAIDKTVPSYHIDCAERILPGNRIEHKPLGGDLVVTEGWLPDGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED + ++ +K
Sbjct: 385 VEDAIDRILAMK 396
>gi|434398820|ref|YP_007132824.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Stanieria
cyanosphaera PCC 7437]
gi|428269917|gb|AFZ35858.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Stanieria
cyanosphaera PCC 7437]
Length = 402
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 290/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S++I+ ++ N ++ T G+V ++LAE++GFCWGVERAV +AYE R+ FP ++IWI
Sbjct: 31 LNSEYQSNLIQTIRNNSYQLTKGDVTIRLAEAFGFCWGVERAVAMAYETRQHFPTQRIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V +G K F VV GDVV+LPAFGA+V EM LN++
Sbjct: 91 TNEIIHNPSVNQRLREMKVGFIDVIDGNKDFSVVQSGDVVILPAFGASVTEMQLLNDRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY+HEET+AT+SFA KY++V N+++AEYV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKRDYTSIIHGKYNHEETIATSSFADKYLVVLNLQQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E FL KFK A S+GFDPD+DLV++GIANQTTMLK ETE+IGKL
Sbjct: 211 VNYILYG------GDREEFLTKFKNAYSEGFDPDLDLVRIGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G +NEHF+SFNTICDATQERQDAM +V+E + L++V+
Sbjct: 265 EQTMLKKYGPIELNEHFMSFNTICDATQERQDAMLNLVKEDLALMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + GIPSY IDS RIG GN+I +K + +L KENWLP+G+ITIG+TSGASTPDK
Sbjct: 325 EIAIEHGIPSYHIDSVARIGEGNRIEHKPLGKDLEIKENWLPEGKITIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V DV++K+F++K
Sbjct: 385 VADVIEKIFDLK 396
>gi|428319099|ref|YP_007116981.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
nigro-viridis PCC 7112]
gi|428242779|gb|AFZ08565.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
nigro-viridis PCC 7112]
Length = 401
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 281/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M Y S +I+++++N + G V ++LA+++GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 31 MQTAYQSSLIQQIRDNNYRLERGAVTIRLAQAFGFCWGVERAVAIAYETRQHFPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V IPVE+G+K F VV+ GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLRDMEVGFIPVEKGQKDFSVVDSGDVVILPAFGASVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHG+Y HEETVAT+SFA KY+IV N +EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKKDYTSIIHGQYKHEETVATSSFADKYLIVLNWQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G ++ FL KF KA S GFDPD DL VGIANQTTMLK ETE IGKL
Sbjct: 211 SNYILHG------GDRDEFLAKFSKAYSAGFDPDRDLEMVGIANQTTMLKTETENIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRKFG EN++EHF SFNTICDATQERQDAM +V+EK+DL+LV+
Sbjct: 265 ERTMMRKFGPENLSEHFQSFNTICDATQERQDAMLSLVDEKLDLMLVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA D+ +PSY ID +RI PGN+I +K + +LV E WLP GQI +G+TSGASTPDK
Sbjct: 325 EIAIDKTVPSYHIDCAERILPGNRIEHKPLGADLVVTEGWLPDGQIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED + ++F K
Sbjct: 385 VEDAIDRIFATK 396
>gi|332708720|ref|ZP_08428692.1| IPP and DMAPP forming E-4-hydroxy-3-methyl-but-2-enyl pyrophosphate
reductase [Moorea producens 3L]
gi|332352574|gb|EGJ32142.1| IPP and DMAPP forming E-4-hydroxy-3-methyl-but-2-enyl pyrophosphate
reductase [Moorea producens 3L]
Length = 402
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/372 (59%), Positives = 287/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ N + G+V ++LAE++GFCWGVERAV +AYE R FP E+IWI
Sbjct: 31 LESEYQSSLIEQIRANNYRLQQGDVTIRLAEAFGFCWGVERAVAMAYETRTHFPNEQIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM+V I VE+GKK F VV GDVV+LPAFGA+V+EM L+ K+
Sbjct: 91 TNEIIHNPSVNQRLREMSVGFIAVEDGKKDFSVVGAGDVVILPAFGASVQEMQLLHEKDC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY HEETVAT+SFAGKY++V N++EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKKEYTSIIHGKYKHEETVATSSFAGKYLVVLNLQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YI+ G ++ FL+KFK A+S GFDP+ DL ++GIANQTTMLK ETE++GKL
Sbjct: 211 ANYIING------GNRDEFLDKFKNAISAGFDPERDLERIGIANQTTMLKTETEQMGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G N+N+HF SFNTICDATQERQDAM ++VEEK+DL++V+
Sbjct: 265 ERTMMKKYGTSNLNDHFQSFNTICDATQERQDAMLELVEEKLDLMIVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R +PSY IDS RI ++I +K +H E+ NWLP G I +G+TSGASTPDK
Sbjct: 325 EIAIERQLPSYHIDSVNRIISADEIEHKPLHQEVEVARNWLPSGSIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV+ K+FE+K
Sbjct: 385 VEDVINKIFELK 396
>gi|443323129|ref|ZP_21052139.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Gloeocapsa sp. PCC 73106]
gi|442787184|gb|ELR96907.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Gloeocapsa sp. PCC 73106]
Length = 397
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 289/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+NQEY S +I+++++ F T GNV + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 LNQEYQSSLIQEIRDRNFSLTRGNVTILLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V+ I V+ G+K F VV GDVV+LPAFGA++ EM TLN+K
Sbjct: 91 TNEIIHNPSVNQRLKEMQVKFIEVKAGEKDFSVVESGDVVILPAFGASIAEMQTLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWV+KVW SVEKHKK DYTSIIHGKY+HEET+AT+SFA KY+IV N++EAEYV
Sbjct: 151 TIVDTTCPWVAKVWNSVEKHKKKDYTSIIHGKYNHEETIATSSFADKYLIVLNLEEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FL F +A S GFDPD DLV++GIANQTTMLK ETE+IGKL
Sbjct: 211 ANYILKG------GVKSEFLAHFAQACSDGFDPDKDLVRIGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E T+++K+G +NEHF+SFNTICDATQERQDAM+++V+ ++ L++V+
Sbjct: 265 EHTILKKYGPIKLNEHFMSFNTICDATQERQDAMFELVKTELSLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA+ +GIPSY IDS RIGPGN++ +K + EL ENWL +G+I +GITSGASTPDK
Sbjct: 325 EIAQAKGIPSYHIDSSDRIGPGNRVEHKPLGKELEITENWLKEGEIVVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V DV++K+F +K
Sbjct: 385 VADVIEKIFNLK 396
>gi|414076773|ref|YP_006996091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena sp.
90]
gi|413970189|gb|AFW94278.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena sp.
90]
Length = 402
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/377 (59%), Positives = 288/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ E+ S++I++++ + + G+V ++LA+++GFCWGVERAV +AYE R+ FP E IWI
Sbjct: 31 LQSEFQSNLIQEIRNSNYTLNRGDVTIQLAQAFGFCWGVERAVAMAYETRQHFPTEHIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VNKR++EM V+ IPV + K F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNKRMQEMQVEFIPVIDQVKDFSVVGSGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY HEETVAT+SFAGKY+IV N++EAEYV
Sbjct: 151 QIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G ++ FL KF KA S GFDPD DL +VGIANQTTMLK ETE+IGK++
Sbjct: 211 INYILNG------GNRQEFLAKFAKACSAGFDPDQDLERVGIANQTTMLKDETEKIGKML 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF +FNTICDATQERQDAM ++VEEKVDL++V+
Sbjct: 265 ERTMMQKYGPAELNQHFQNFNTICDATQERQDAMLELVEEKVDLMIVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA DR IPSY ID +RI N I ++ + GEL ENWLP G+I +G+TSGASTPD+
Sbjct: 325 QIAFDRDIPSYHIDCVERIQSINNIEHRQLTGELAITENWLPVGKIKVGVTSGASTPDQV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VED+++K+F +K L
Sbjct: 385 VEDIIEKIFALKATATL 401
>gi|282900359|ref|ZP_06308309.1| LytB protein [Cylindrospermopsis raciborskii CS-505]
gi|281194672|gb|EFA69619.1| LytB protein [Cylindrospermopsis raciborskii CS-505]
Length = 401
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/369 (60%), Positives = 286/369 (77%), Gaps = 18/369 (4%)
Query: 4 EYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNE 63
EY S +I++++ + + GN ++LA+++GFCWGVERAV +AYE R+ FP E+IWITNE
Sbjct: 34 EYESSLIQEIRNSNYTIKKGNTTIRLAQAFGFCWGVERAVAMAYETRQHFPTERIWITNE 93
Query: 64 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 123
IIHNP+VN+R++EM V IPV KK F VV +GDVV+LPAFGA+V+EM L++K QIV
Sbjct: 94 IIHNPSVNQRMQEMGVGFIPVTANKKDFSVVEQGDVVILPAFGASVQEMQILHDKGCQIV 153
Query: 124 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 183
DTTCPWVSKVW +VEKHKKG++TSIIHGKY HEETVAT+SFAGKY+IV N++EAEYV +Y
Sbjct: 154 DTTCPWVSKVWNTVEKHKKGEFTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAEYVSNY 213
Query: 184 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 243
IL G +E FL +F KA S GFDPD DL KVGIANQTTMLKGETE+IGK+ EKT
Sbjct: 214 ILHG------GNREEFLTRFAKAYSAGFDPDKDLEKVGIANQTTMLKGETEQIGKIFEKT 267
Query: 244 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIA 291
MM+K+G +N+HF SFNTICDATQERQDAM ++VE ++DLI+V+ +IA
Sbjct: 268 MMQKYGTLALNDHFQSFNTICDATQERQDAMLELVEHELDLIIVIGGFNSSNTTQLQQIA 327
Query: 292 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 351
+R IPSY IDS +RI P N I ++ ++GE+ +NWLP G+ +G+TSGASTPDK VED
Sbjct: 328 INRNIPSYHIDSVERIKPSNAIEHRQLNGEIATTKNWLPIGETIVGVTSGASTPDKVVED 387
Query: 352 VLKKVFEIK 360
+++K+F +K
Sbjct: 388 IIEKIFTLK 396
>gi|427706395|ref|YP_007048772.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7107]
gi|427358900|gb|AFY41622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7107]
Length = 397
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/372 (59%), Positives = 287/372 (77%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 LQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPREQIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R+++M V+ IP+E GKK F VV DVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNQRMQDMEVKFIPLETGKKDFSVVETNDVVILPAFGASVQEMQILHDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY+IV N+KEA YV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLKEAHYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 TDYILNG------GNREEFLQKFAKACSAGFDPDQDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V+ +DL++V+
Sbjct: 265 ERTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVQHDLDLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA ++GIPSY ID+ +RI I ++ ++GEL ENWLP G+I +GITSGASTPDK
Sbjct: 325 QIAFEKGIPSYHIDAVERIKSAQAIEHRQLNGELAIAENWLPAGKIVVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED+++++F +K
Sbjct: 385 VEDIIEEIFTLK 396
>gi|427737354|ref|YP_007056898.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Rivularia sp. PCC 7116]
gi|427372395|gb|AFY56351.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Rivularia sp. PCC 7116]
Length = 402
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/377 (60%), Positives = 288/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S +I+++++N + T G+V ++LAE++GFCWGVERAV +AYE RK FP E+IWI
Sbjct: 31 LNSEYQSGLIQEIRDNNYSLTRGDVTIRLAEAFGFCWGVERAVAMAYETRKHFPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V I ++ +K F VV GDVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNQRLKEMQVGFISLKADEKDFSVVGSGDVVILPAFGASVQEMQLLSDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK + TSIIHGKY HEET+AT+SFAGKY+IV N++EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKVECTSIIHGKYKHEETIATSSFAGKYLIVLNLQEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
YIL G +E FL KF KA S GFDPD DL KVGIANQTTMLKGETE+IGKL
Sbjct: 211 TSYILNG------GNREEFLAKFSKACSSGFDPDTDLKKVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N HF SFNTICDATQERQDAM ++VEEK+D ++V+
Sbjct: 265 ERTMMKKYGPTELNNHFQSFNTICDATQERQDAMLELVEEKLDFMIVIGGFNSSNTAHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA ++ IPSY +DS +RI N I ++ + G + ENWLP G+I +GITSGASTPDK
Sbjct: 325 EIAVEKKIPSYHVDSVERILSENNIEHRQLDGNIEISENWLPDGEIIVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VEDV+KK+FE+K+ A+
Sbjct: 385 VEDVIKKIFELKKAVAV 401
>gi|390441907|ref|ZP_10229935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis sp.
T1-4]
gi|389834805|emb|CCI34061.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis sp.
T1-4]
Length = 402
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M +Y SD+I+K++ N + G+V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNQYQSDLIQKIRANNYRLQRGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA++ EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRAMAVGFIPVENGQKDFSVVESGDVVILPAFGASISEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKKDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E V L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPVSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I IG+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIAIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|443316023|ref|ZP_21045486.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 6406]
gi|442784370|gb|ELR94247.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 6406]
Length = 406
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/375 (58%), Positives = 288/375 (76%), Gaps = 21/375 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY S +I+K++++ + +T G V ++LA+++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 MQTEYNSSLIQKIRDHNYVFTQGQVTIRLAKAFGFCWGVERAVAMAYETRQHFPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN+RL EM V I + +G+K F V GDVV+LPAFGA+V+EM LN++
Sbjct: 91 TNEIIHNPGVNQRLREMDVHFIELVDGQKDFSGVGPGDVVILPAFGASVQEMQFLNDRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGKY+HEETVAT+SFA Y++V N++EA+YV
Sbjct: 151 TIVDTTCPWVSKVWNTVEKHKKKAHTSIIHGKYAHEETVATSSFAQTYLVVLNLEEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYI+ G +E FL KF+ A S+GFDPD DL ++GIANQTTMLKGETE IGKL
Sbjct: 211 ADYIMQG------GDREEFLTKFRHAHSEGFDPDRDLERIGIANQTTMLKGETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK---VDLILVV--------- 288
E+TM++K+G + +N+HF++FNTICDATQERQDAM+++V+E VDL+LV+
Sbjct: 265 ERTMLQKYGPQALNDHFLAFNTICDATQERQDAMFELVDEADKTVDLMLVIGGYNSSNTT 324
Query: 289 ---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
EIA DR IPSY ID +RIGPGN+I +K +HG+L ENWLP G IT+G+TSGASTP
Sbjct: 325 HLQEIAIDRTIPSYHIDGPERIGPGNRIEHKPLHGDLTVTENWLPPGPITVGVTSGASTP 384
Query: 346 DKAVEDVLKKVFEIK 360
D+AVE + ++FE+K
Sbjct: 385 DRAVEVAIARIFELK 399
>gi|425458947|ref|ZP_18838433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9808]
gi|389823434|emb|CCI28327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9808]
Length = 402
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGEVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVSFIPVENGQKDFSVVESGDVVILPAFGASVSEMKILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSAHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|145349772|ref|XP_001419302.1| isopentenyl diphosphate synthase, putative chloroplast precursor;
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(ISPH) (LYTB) [Ostreococcus lucimarinus CCE9901]
gi|144579533|gb|ABO97595.1| isopentenyl diphosphate synthase, putative chloroplast precursor;
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(ISPH) (LYTB) [Ostreococcus lucimarinus CCE9901]
Length = 380
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 272/366 (74%), Gaps = 19/366 (5%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++ K+KENG Y + KLA++YGFCWGVERAVQ+AYEARKQFPE K+WITNEIIHNP
Sbjct: 13 LVAKMKENGLSYVEDGITFKLADAYGFCWGVERAVQMAYEARKQFPEAKLWITNEIIHNP 72
Query: 69 TVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCP 128
TVN RL EM V + K F V +G+VV+LPAFGA+V EM L +K IVDTTCP
Sbjct: 73 TVNDRLSEMGVNFVEETSDGKDFSGVKRGEVVILPAFGASVHEMKFLADKGANIVDTTCP 132
Query: 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE 188
WVSKVW +V+ HK+ D+TSIIHGKYSHEETVATASFA Y+IVK+M+EA YV DYIL G
Sbjct: 133 WVSKVWNAVDTHKRKDFTSIIHGKYSHEETVATASFATTYLIVKDMREANYVRDYILKG- 191
Query: 189 LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF 248
K F+EKFK A+S+GFDPD DL VGIANQTTMLKGETE IGKL + TMM KF
Sbjct: 192 -----GDKAEFMEKFKNAMSQGFDPDEDLDGVGIANQTTMLKGETEAIGKLFQSTMMEKF 246
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI 296
GVENV++HF+ +TICDATQERQDAMYK+V+ K D++LVV EI+ED+ I
Sbjct: 247 GVENVDQHFVVMDTICDATQERQDAMYKLVDAKPDIMLVVGGLNSSNTQHLQEISEDKAI 306
Query: 297 PSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKK 355
PSYW+D+ R+ N I++KL HGELV + WLP G + IGITSGASTPDK VEDV+
Sbjct: 307 PSYWVDTADRLNADTNSISHKLAHGELVTTDGWLPAGDVVIGITSGASTPDKVVEDVMDV 366
Query: 356 VFEIKR 361
VF KR
Sbjct: 367 VFATKR 372
>gi|425452921|ref|ZP_18832736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 7941]
gi|389765106|emb|CCI08959.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 7941]
Length = 402
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGEVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMKILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|428774031|ref|YP_007165819.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
stanieri PCC 7202]
gi|428688310|gb|AFZ48170.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
stanieri PCC 7202]
Length = 399
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/372 (61%), Positives = 280/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S +IK ++EN ++ T G V ++LAE++GFCWGVERAV +AYE R FP EKIWI
Sbjct: 31 LNSEYESSLIKTIRENNYQITKGEVTIRLAEAFGFCWGVERAVAMAYETRTHFPTEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V IPV +G K F VV+ G+VV+LPAFGA+V+EM LNNK
Sbjct: 91 TNEIIHNPSVNERLREMNVGFIPVIDGDKDFSVVDSGEVVILPAFGASVQEMELLNNKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK YTSIIHGKY+HEET+AT+SFA Y++V NM +A YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKRSYTSIIHGKYNHEETIATSSFANTYLVVLNMDQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G KE FL FK A S+GFDPD DL +VGIANQTTMLK ETEEIG+L
Sbjct: 211 SDYILHG------GDKEEFLNIFKNAHSQGFDPDKDLERVGIANQTTMLKTETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
++TM++K+G +NEHF+SFNTICDATQERQDAM +V+EK+DL++V+
Sbjct: 265 QQTMLKKYGPTELNEHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA D IPSY IDS RI N I YK + +L K WLPKG+IT+G+TSGASTPDK
Sbjct: 325 EIAIDYNIPSYHIDSASRIDDNNNIEYKPLKKDLEIKSGWLPKGKITVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VED+++K+F +K
Sbjct: 385 VEDIIEKIFALK 396
>gi|425454255|ref|ZP_18834001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9807]
gi|389805126|emb|CCI15289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9807]
Length = 402
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I+K++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 MTNEYQSDLIQKIRENNYRLERGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD +L +GIANQTTMLK ETE IGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRNLDYIGIANQTTMLKSETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|443668765|ref|ZP_21134257.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa DIANCHI905]
gi|159029347|emb|CAO90213.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330727|gb|ELS45422.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa DIANCHI905]
Length = 402
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I+K++EN + G V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQKIRENNYRLERGEVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETE IGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|172036023|ref|YP_001802524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
ATCC 51142]
gi|354552830|ref|ZP_08972137.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. ATCC
51472]
gi|226741030|sp|B1WTZ2.1|ISPH_CYAA5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|171697477|gb|ACB50458.1| putative LytB protein [Cyanothece sp. ATCC 51142]
gi|353554660|gb|EHC24049.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. ATCC
51472]
Length = 402
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/377 (62%), Positives = 292/377 (77%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+K++EN +++ G+V +KLAE++GFCWGVERAV +AYE R+ FP+EKIWI
Sbjct: 31 MNTEYQSSLIQKIRENNYQWQEGDVTIKLAEAFGFCWGVERAVAMAYETRQHFPQEKIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLLEMNVGFIEVINGSKDFSVVEAGDVVILPAFGASVTEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY HEETVAT+SFAG Y++V N+KEA+YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYKHEETVATSSFAGTYLVVLNLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G K+ FLEKFK A S+GFDPD DL+++GIANQTTMLK ETE+IGKL
Sbjct: 211 CDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +NEHF+SFNTICDATQERQDAM +VEE+VD+++V+
Sbjct: 265 ETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+ ++GI SY IDS+KRI PGNKI +K + ++ KENWLP G+I +G+TSGASTPDK
Sbjct: 325 EISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VE V++++FE K L
Sbjct: 385 VEAVIERIFEEKNAGVL 401
>gi|425440299|ref|ZP_18820604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9717]
gi|389719297|emb|CCH96842.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9717]
Length = 402
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVSFIPVENGQKDFSVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLDQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F K
Sbjct: 385 VEEVIEKIFAFK 396
>gi|425469468|ref|ZP_18848403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9701]
gi|389880812|emb|CCI38540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9701]
Length = 402
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I+K++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 MTNEYQSDLIQKIRENNYRLERGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFSVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+ FDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQDFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F K
Sbjct: 385 VEEVIEKIFAFK 396
>gi|308806748|ref|XP_003080685.1| putative LytB protein (ISS) [Ostreococcus tauri]
gi|116059146|emb|CAL54853.1| putative LytB protein (ISS) [Ostreococcus tauri]
Length = 456
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/367 (61%), Positives = 274/367 (74%), Gaps = 19/367 (5%)
Query: 7 SDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIH 66
S ++ K+K+ GF Y + KLA++YGFCWGVERAVQ+AYEARKQFPE K+WITNEIIH
Sbjct: 87 SGLVAKMKDEGFAYVKDGITFKLADAYGFCWGVERAVQMAYEARKQFPESKLWITNEIIH 146
Query: 67 NPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTT 126
NPTVN+RL +M V I E K F V G+VV+LPAFGA+V EM L ++ IVDTT
Sbjct: 147 NPTVNERLSDMGVNFIEESENGKDFSGVQSGEVVILPAFGASVHEMKFLADRGANIVDTT 206
Query: 127 CPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG 186
CPWVSKVW +V+ HK+ ++TSIIHGKYSHEETVATASFA Y+IVK+M EAEYV DYI+
Sbjct: 207 CPWVSKVWNAVDTHKRKEFTSIIHGKYSHEETVATASFATTYLIVKDMTEAEYVRDYIMN 266
Query: 187 GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 246
G K F+EKFK A+S+GFDPD DL VGIANQTTMLKGETE IGKL ++TMM
Sbjct: 267 G------GDKAEFMEKFKNAMSEGFDPDEDLNGVGIANQTTMLKGETEAIGKLFQQTMME 320
Query: 247 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDR 294
KFGVEN ++HF+ +TICDATQERQDAMYK+V++K D++LVV EIAED+
Sbjct: 321 KFGVENADQHFVVMDTICDATQERQDAMYKLVDDKPDIMLVVGGFNSSNTSHLQEIAEDK 380
Query: 295 GIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
IPSYW+D+ +R+ P N I +KL HGELV + WLP + IGITSGASTPDK VEDV+
Sbjct: 381 SIPSYWVDTAERLDPSKNSITHKLAHGELVTTDAWLPASDVVIGITSGASTPDKVVEDVI 440
Query: 354 KKVFEIK 360
VF K
Sbjct: 441 DVVFATK 447
>gi|209402463|gb|ACI45954.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Mantoniella squamata]
Length = 456
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/364 (60%), Positives = 278/364 (76%), Gaps = 18/364 (4%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++ K++E+GF Y G+V +KLA++YGFCWGVERAVQ+AYEARKQ+P E +WITNEIIHNP
Sbjct: 89 LVAKMRESGFSYVQGDVTLKLADAYGFCWGVERAVQMAYEARKQYPTENLWITNEIIHNP 148
Query: 69 TVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCP 128
TVNK+L +M V+ I + K F V G+VV+LPAFGA+V EM L +K V IVDTTCP
Sbjct: 149 TVNKKLADMGVKFIEETKDGKDFSGVQNGEVVILPAFGASVHEMKLLADKGVSIVDTTCP 208
Query: 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE 188
WVSKVW +V+ HK+ ++SIIHGK++HEETVATASFAG Y++VK+MKEA+YVCDYIL G
Sbjct: 209 WVSKVWNAVDSHKRKQFSSIIHGKWAHEETVATASFAGTYLVVKDMKEAQYVCDYILNG- 267
Query: 189 LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF 248
+E FL KFK A S GFDPD DL VGIANQTTMLKGET++IGKL+E+TMM K
Sbjct: 268 -----GDREEFLAKFKNAYSAGFDPDTDLEGVGIANQTTMLKGETDQIGKLLERTMMEKH 322
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI 296
GV N+ +H++ +TICDATQERQDAMYK+VE K D++LVV EI+ED I
Sbjct: 323 GVANLADHYMVMDTICDATQERQDAMYKLVEAKPDIMLVVGGFNSSNTQHLQEISEDNSI 382
Query: 297 PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
PS+W+D+ R+ N I ++L HGELVE ++WLP+G + IG+TSGASTPDK VE+V+ +
Sbjct: 383 PSFWVDTPARLSTDNTILHRLAHGELVETKDWLPEGPVVIGVTSGASTPDKVVEEVIDVI 442
Query: 357 FEIK 360
F K
Sbjct: 443 FATK 446
>gi|425444881|ref|ZP_18824922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9443]
gi|389735275|emb|CCI01193.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9443]
Length = 402
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD +L +GIANQTTMLK ETE IGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRNLDYIGIANQTTMLKSETEAIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|22298585|ref|NP_681832.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermosynechococcus elongatus BP-1]
gi|50401049|sp|Q8DK29.1|ISPH_THEEB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|22294765|dbj|BAC08594.1| tlr1041 [Thermosynechococcus elongatus BP-1]
Length = 402
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/372 (61%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I++++ NG+ + G+V ++LAE++GFCWGVERAV +AYE R FP E+IWI
Sbjct: 31 LQGEYQSSLIQQIRANGYRWQQGDVTIRLAEAFGFCWGVERAVALAYETRTHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL +MAV+ IPV G K F V GDVV+LPAFGA+V+EM LN +
Sbjct: 91 TNEIIHNPSVNERLRQMAVEFIPVVNGVKDFSGVRPGDVVILPAFGASVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SFAG Y+IV N++EA YV
Sbjct: 151 TIVDTTCPWVSKVWHSVEKHKKVSFTSIIHGKYNHEETIATSSFAGTYLIVLNLEEARYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G + AF+ KF KA S GFDPD DLV+VGIANQTTMLKGETE+IGKL
Sbjct: 211 CDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G + +NEHF+SFNTICDATQERQDAM +V+E +DL++V+
Sbjct: 265 ERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + GIPSY IDS RIGPGN+I +K +H ENWLP ITIGITSGASTPDK
Sbjct: 325 EIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+VL K+F ++
Sbjct: 385 VEEVLNKIFALR 396
>gi|428776515|ref|YP_007168302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothece sp.
PCC 7418]
gi|428690794|gb|AFZ44088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothece sp.
PCC 7418]
Length = 404
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/372 (61%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S +I++++EN + GNV ++LAE++GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 33 LNSEYQSPLIQEIRENNYRLQKGNVTIRLAEAFGFCWGVERAVAIAYETRQHFPNERIWI 92
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V IPV EG+K F VV+KGDVV+LPAFGA+V EM LN+
Sbjct: 93 TNEIIHNPSVNQHLRDMNVGFIPVNEGEKDFSVVDKGDVVILPAFGASVNEMQLLNDLGC 152
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SFA KY++V N++EA+YV
Sbjct: 153 TIVDTTCPWVSKVWNSVEKHKKRSYTSIIHGKYHHEETVATSSFAEKYLVVLNLEEAQYV 212
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G KE F++KF +A S GFDPDVDL KVGIANQTTMLK ETE+IGKL
Sbjct: 213 ADYILRG------GDKEEFMKKFDQASSPGFDPDVDLEKVGIANQTTMLKSETEQIGKLF 266
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G N HF+SFNTICDATQERQDAM+ +V+E + +++V+
Sbjct: 267 ERTMLEKYGPTEFNNHFMSFNTICDATQERQDAMFDLVKEDLSVLVVIGGFNSSNTTHLQ 326
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI + GIPSY ID+ RI GNKI +K + +L ENWLP+G+IT+GITSGASTPD+A
Sbjct: 327 EIGIEHGIPSYHIDAGNRILEGNKIEHKPLGKDLEIAENWLPEGEITVGITSGASTPDQA 386
Query: 349 VEDVLKKVFEIK 360
VE+V++K+ E K
Sbjct: 387 VEEVIQKILEAK 398
>gi|166364360|ref|YP_001656633.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa NIES-843]
gi|189045811|sp|B0JVA7.1|ISPH_MICAN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166086733|dbj|BAG01441.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa NIES-843]
Length = 402
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E+IWI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLQRGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLDQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDA++++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAIFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F K
Sbjct: 385 VEEVIEKIFAFK 396
>gi|440755905|ref|ZP_20935106.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa TAIHU98]
gi|440173127|gb|ELP52585.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa TAIHU98]
Length = 402
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/372 (59%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGEVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IP+E G+K F VV GDVV+LPAFGA+ EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPMENGQKDFTVVESGDVVILPAFGASASEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLE+FK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEEFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIKRAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|428308076|ref|YP_007144901.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crinalium
epipsammum PCC 9333]
gi|428249611|gb|AFZ15391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crinalium
epipsammum PCC 9333]
Length = 402
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/372 (59%), Positives = 285/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I++++EN G V ++LA+++GFCWGVERAV +AYE R+ FP E IW+
Sbjct: 31 LKSEYQSNLIQQIRENNNTLQRGEVTIQLAQAFGFCWGVERAVAMAYETRQHFPNEDIWV 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNP+VN+RLEEM ++ +PV+ G K F VVN GDVV+LPAFGA V+EM LN+K
Sbjct: 91 TNELIHNPSVNQRLEEMLIRYVPVDAGNKDFSVVNSGDVVILPAFGATVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+I+DTTCPWVSKVW +VEKHKK +YTSIIHGKY HEETVAT+SFAG Y+IV NM EAEYV
Sbjct: 151 KIIDTTCPWVSKVWNTVEKHKKKNYTSIIHGKYKHEETVATSSFAGTYLIVFNMAEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G ++ F+ KF KA S GF+PD DL +VGIANQTTMLK ETE+IGKL
Sbjct: 211 CNYILNG------GNRDEFMSKFSKACSVGFNPDTDLERVGIANQTTMLKTETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TMM+K+ + +NEHF +FNTICDATQERQDAM+++V+E +DL++V+
Sbjct: 265 EHTMMKKYPPDELNEHFQNFNTICDATQERQDAMFELVKEDLDLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+I DR IPSY IDS RI P N+I +K + +L ENWLP+G++ +GITSGASTPDK
Sbjct: 325 QIPIDRNIPSYHIDSAVRIHPENRIEHKPIGKDLEVVENWLPEGKVVVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+FE+K
Sbjct: 385 VEEVIEKIFELK 396
>gi|427718525|ref|YP_007066519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 7507]
gi|427350961|gb|AFY33685.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 7507]
Length = 406
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP ++IWI
Sbjct: 31 LQSEYQSNLIQEIRDRNYVLQQGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPSDRIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN+RL EM V+ IP + K F VV DVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPAVNQRLREMQVEFIPDDGKIKDFSVVESADVVILPAFGASVQEMQLLHDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY+IV N++EAEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLEEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E F+ KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL
Sbjct: 211 SNYILNG------GNREEFIAKFAKAYSAGFDPDRDLERVGIANQTTMLKGETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+G + +N+HF SFNTICDATQERQDAM+++VEEK+DL++V+
Sbjct: 265 ERTMMRKYGPDELNQHFQSFNTICDATQERQDAMFELVEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI RGIPSY ID +RI I ++ + GEL +NWLP G+I +G+TSGASTPDK
Sbjct: 325 EIPIQRGIPSYHIDCVERIKSAQAIEHRQLDGELAIAQNWLPDGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VEDV++K+F +K
Sbjct: 385 VEDVIEKIFALK 396
>gi|425434947|ref|ZP_18815411.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9432]
gi|389675424|emb|CCH95481.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9432]
Length = 402
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 284/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGEVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMKILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A V
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANDV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLE+FK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEEFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|427725955|ref|YP_007073232.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptolyngbya
sp. PCC 7376]
gi|427357675|gb|AFY40398.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptolyngbya
sp. PCC 7376]
Length = 403
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/377 (58%), Positives = 283/377 (75%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+++++N + T G+ + LAE++GFCWGVERAV +AYE RK FP EKIW+
Sbjct: 31 MNSEYQSGLIQEIRDNNYSLTRGDATIYLAEAFGFCWGVERAVAMAYETRKHFPTEKIWV 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN RL +M V I V G+K F V +GDVV+LPAFGA V+EM LNN+
Sbjct: 91 TNEIIHNPSVNNRLRDMNVHFIDVINGEKDFSGVTQGDVVILPAFGATVQEMELLNNRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWTSVEKHKK DYTS+IHGKY HEETVAT+SFAGKY+++ N+ EA YV
Sbjct: 151 TIVDTTCPWVSKVWTSVEKHKKQDYTSLIHGKYKHEETVATSSFAGKYLVLLNLDEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G ++AFL+KFK A S+GFDP++DL +VG+ANQTTMLK ETE++GKL
Sbjct: 211 RDYILNG------GDRQAFLDKFKNAYSEGFDPEIDLERVGVANQTTMLKSETEQMGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 EQTMLEKFGPTELNQHFMSFNTICDATQERQDAMFDLVKEDLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA D IPSY IDS R+ N+I +K + ++ ++NWLP G++ IGITSGASTPDK
Sbjct: 325 EIAVDYKIPSYHIDSGDRLLADNRIEHKPLGEDITTQDNWLPSGKLKIGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VEDV+ +F K E A+
Sbjct: 385 VEDVIAHIFTEKAEPAV 401
>gi|218441820|ref|YP_002380149.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 7424]
gi|226722802|sp|B7KEG3.1|ISPH_CYAP7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|218174548|gb|ACK73281.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7424]
Length = 402
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/377 (59%), Positives = 284/377 (75%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I++++ N + T G+V ++LAE++GFCWGVERAV ++YE R+ FP ++IW+
Sbjct: 31 MNSEYQSSLIQEIRNNNYRLTQGDVTIRLAEAFGFCWGVERAVAMSYETRQHFPNQRIWL 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IHNP+VN+RL +M V+ IPV E +K F VV + DVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEVIHNPSVNQRLRDMKVEFIPVIEDQKDFSVVERDDVVILPAFGASVTEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWV+KVW SVEKHKK +YTSIIHGKY HEETVAT+SFAG Y++V NM++A+YV
Sbjct: 151 TIVDTTCPWVAKVWNSVEKHKKRNYTSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G K+ FL KFKKA S+GFDPD DL +VGIANQTTMLK ETEEIGKL
Sbjct: 211 CNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G ++N HF+SFNTICDATQERQDAM +V+EK+DL++V+
Sbjct: 265 EHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI+ GI SY IDS RI N I +K + +L KENWLP G+I +G+TSGASTPD
Sbjct: 325 EISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VE VL+K+F IK A+
Sbjct: 385 VEQVLQKIFAIKSAVAM 401
>gi|427418924|ref|ZP_18909107.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 7375]
gi|425761637|gb|EKV02490.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 7375]
Length = 418
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/378 (58%), Positives = 288/378 (76%), Gaps = 22/378 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ EY SD+I+ ++ G+ YT G+V +KLA+ +GFCWGVER++ +AYEAR+ FP ++IWI
Sbjct: 32 MDDEYQSDLIQTIRNQGYTYTQGDVTIKLAKDFGFCWGVERSIAMAYEARQHFPNQRIWI 91
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN+RL+EM VQ I V +G K F V +GDVV+LPAFGA+V+EM LN ++
Sbjct: 92 TNEIIHNPGVNERLQEMNVQFIQVIDGTKDFSGVEQGDVVILPAFGASVDEMKLLNERDC 151
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWTSVEKHKK +TSIIHGKY HEETVAT SFA Y++V N+ EA+YV
Sbjct: 152 TIVDTTCPWVSKVWTSVEKHKKQAFTSIIHGKYQHEETVATKSFANTYLVVLNLDEAQYV 211
Query: 181 CDYILGGELNGSSSTKEA------FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 234
+YI LNG +S +E FL+KF A S+GFDPD DL VG+ANQTTMLKGETE
Sbjct: 212 ANYI----LNGGNSPEERLRKRTEFLDKFANAYSQGFDPDQDLDAVGVANQTTMLKGETE 267
Query: 235 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------ 288
+IGKL+E+TM++K+G + +NEHF SFNTICDATQERQDAM+++V+ +DL++V+
Sbjct: 268 QIGKLLERTMLKKYGPQAINEHFSSFNTICDATQERQDAMFELVDMDMDLMVVIGGFNSS 327
Query: 289 ------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 342
EIA +R IPSY ID +R+GPGN+I ++ +H + WLP G+I IGITSGA
Sbjct: 328 NTTHLQEIAIERDIPSYHIDGPQRLGPGNQIEHQPLHKTPTVSKEWLPTGKIVIGITSGA 387
Query: 343 STPDKAVEDVLKKVFEIK 360
STPDK+V V++++F++K
Sbjct: 388 STPDKSVAQVIQRIFQLK 405
>gi|186683473|ref|YP_001866669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc
punctiforme PCC 73102]
gi|238691254|sp|B2IZV5.1|ISPH_NOSP7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|186465925|gb|ACC81726.1| hydroxymethylbutenyl pyrophosphate reductase [Nostoc punctiforme
PCC 73102]
Length = 402
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/377 (58%), Positives = 288/377 (76%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E IWI
Sbjct: 31 LQSEYQSNLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEHIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM V+ IP+E K F VV GDVV+LPAFGA+V+EM L++K
Sbjct: 91 TNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPAFGASVQEMQILHDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY+IV N++EA+YV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYI+ G +E FL KF KA S GFDPD DL +VGIANQTTMLK ETE+IGKL
Sbjct: 211 ADYIING------GNREEFLTKFAKACSAGFDPDRDLERVGIANQTTMLKDETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+ +N+HF SFNTICDATQERQDAM ++VE ++L++V+
Sbjct: 265 ERTMLQKYSPIELNQHFQSFNTICDATQERQDAMLELVEHNLNLMVVIGGFNSSNTTQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +R IPSY ID+ +RI G+ I ++ ++G+L+ ENWLP G+I +GITSGASTPDK
Sbjct: 325 QIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDGEIVVGITSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VEDV++K+F +K AL
Sbjct: 385 VEDVIEKIFAVKATAAL 401
>gi|428780085|ref|YP_007171871.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Dactylococcopsis salina PCC
8305]
gi|428694364|gb|AFZ50514.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Dactylococcopsis salina PCC
8305]
Length = 404
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/369 (61%), Positives = 282/369 (76%), Gaps = 18/369 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++N + GNV ++LAE++GFCWGVERAV IAYE R+ FP+E+IWI
Sbjct: 33 LQSEYQSNLIQEIRDNNYRLKKGNVTIRLAEAFGFCWGVERAVAIAYETRQHFPKERIWI 92
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V IPVE G+K F VV++GDVV+LPAFGA+V EM LN+
Sbjct: 93 TNEIIHNPSVNQHLRDMNVGFIPVENGEKDFSVVDEGDVVILPAFGASVTEMQLLNDLGC 152
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SFA KY++V N++EA+YV
Sbjct: 153 TIVDTTCPWVSKVWNSVEKHKKKSYTSIIHGKYHHEETVATSSFAEKYLVVLNLEEAQYV 212
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G KEAFLEKF +A S GFDPDVDL KVGIANQTTMLK ETE+IGKL
Sbjct: 213 ANYILHG------GDKEAFLEKFYQAYSPGFDPDVDLDKVGIANQTTMLKSETEQIGKLF 266
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G NEHF+SFNTICDATQERQDAM +V+E + L++V+
Sbjct: 267 ERTMLEKYGPTEFNEHFMSFNTICDATQERQDAMLNLVKEDLSLLVVIGGFNSSNTTHLQ 326
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI + GIPSY ID RI GNKI +K + +L ENWLP+G+IT+GITSGASTPD+A
Sbjct: 327 EIGIEYGIPSYHIDGGSRIFEGNKIEHKPLGKDLETMENWLPEGEITVGITSGASTPDQA 386
Query: 349 VEDVLKKVF 357
VEDV++K+
Sbjct: 387 VEDVIEKIL 395
>gi|302767256|ref|XP_002967048.1| hypothetical protein SELMODRAFT_408398 [Selaginella moellendorffii]
gi|300165039|gb|EFJ31647.1| hypothetical protein SELMODRAFT_408398 [Selaginella moellendorffii]
Length = 373
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/366 (63%), Positives = 276/366 (75%), Gaps = 43/366 (11%)
Query: 1 MNQEY-TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
++QEY TSD++K LKEN YTWG+ KQFP++ IW
Sbjct: 49 LDQEYNTSDMLKSLKENS--YTWGD--------------------------KQFPDQHIW 80
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
+TNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PAFGA V+EM L K
Sbjct: 81 LTNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPAFGATVQEMQLLAEKK 140
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASFAGKYIIVKNMKEA Y
Sbjct: 141 VQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASFAGKYIIVKNMKEATY 200
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+ +GS+ TKE LEK K A SKGFDPD DLV+VGIANQTTMLKGETE+IGKL
Sbjct: 201 VCDYILGGKFDGSNGTKEELLEKSKYATSKGFDPDDDLVRVGIANQTTMLKGETEDIGKL 260
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSY 299
+++TMM+K+GVEN N+HF+S NTICDATQ+ + E IPSY
Sbjct: 261 LQRTMMQKYGVENTNDHFMSVNTICDATQQH--------------VAPPRDGEINNIPSY 306
Query: 300 WIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WID+E+RIGPGNKIAY+L HGELVEKENW P G +TIGITSGASTPDK VE+VLK+VF++
Sbjct: 307 WIDTEERIGPGNKIAYRLNHGELVEKENWFPTGPVTIGITSGASTPDKVVENVLKQVFQL 366
Query: 360 KREEAL 365
K++EAL
Sbjct: 367 KKQEAL 372
>gi|425463495|ref|ZP_18842826.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9809]
gi|389831876|emb|CCI24997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9809]
Length = 402
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/372 (59%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I++++EN + G+V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQEIRENNYRLERGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS + I PGN+I +K + +L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAECILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F K
Sbjct: 385 VEEVIEKIFAFK 396
>gi|119512490|ref|ZP_01631570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nodularia
spumigena CCY9414]
gi|119462840|gb|EAW43797.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nodularia
spumigena CCY9414]
Length = 402
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/372 (58%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I+++++ + + G+V ++LA+++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 LQSEYQSSLIQEIRDRNYIWEQGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+R++EM + IPVE G K F VV GDVV+LPAFGA+V+EM L+N+
Sbjct: 91 TNEIIHNPSVNQRMQEMNIGFIPVEAGNKDFSVVETGDVVILPAFGASVQEMQILHNQGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK YTSIIHGKY HEET+AT+SFAGKY+IV N++EA YV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKIAYTSIIHGKYKHEETIATSSFAGKYLIVLNLQEAHYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G ++ FL+KF KA S GFDPD DL +VGIANQTTMLK ETE+IGKL
Sbjct: 211 ADYILNG------GDRQEFLQKFAKACSAGFDPDQDLQRVGIANQTTMLKDETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V+ +DL+LV+
Sbjct: 265 ERTMMQKYGTIELNQHFQSFNTICDATQERQDAMLELVQHDLDLMLVIGGFNSSNTAQLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +R IPSY ID +RI + I ++ ++GEL +NWLP G+I +G+TSGASTPDK
Sbjct: 325 QIAAEREIPSYHIDCVERIKSADAIEHRQLNGELAIAQNWLPNGKIVVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
V DV++K+F +K
Sbjct: 385 VADVMEKIFALK 396
>gi|422302296|ref|ZP_16389659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9806]
gi|389788521|emb|CCI15768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9806]
Length = 402
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/372 (59%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I+K++EN + +V + LA+++GFCWGVERAV +AYE R+ FP+E++WI
Sbjct: 31 MTNEYQSDLIQKIRENNYRLERSDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLRSMAVGFIPVENGQKDFSVVESGDVVILPAFGASVSEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A V
Sbjct: 151 MIVDTTCPWVSKVWNSVEKHKKSAHTSIIHGKYNHEETIATSSFAGTYLIVLNLAQANDV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G K FLEKFK A S+GFDPD DL +GIANQTTMLK ETEEIGKL
Sbjct: 211 ANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L++V+
Sbjct: 265 EHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G+I +G+TSGASTPDK
Sbjct: 325 EIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEGKIIVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIK 360
VE+V++K+F +K
Sbjct: 385 VEEVIEKIFALK 396
>gi|428220520|ref|YP_007104690.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 7502]
gi|427993860|gb|AFY72555.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 7502]
Length = 402
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/373 (60%), Positives = 282/373 (75%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+++ +++ + YT G+V + LA+S+GFCWGVERA+ IAYEARKQFP E+IWI
Sbjct: 35 MKTEYYSDLVQTIRDANYVYTQGDVTIYLAQSFGFCWGVERAIAIAYEARKQFPTERIWI 94
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP VN+RL+EM VQ I + +G K F VV GDVV+LPAFGA+++E LN
Sbjct: 95 TNEIIHNPAVNQRLKEMQVQFIEADAKGNKDFSVVKTGDVVILPAFGASIQETQLLNEIG 154
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
IVDTTCPWVSKVW VEKHKK D+TSI+HGKYSHEET+AT S+A +Y++V NM+EAEY
Sbjct: 155 CTIVDTTCPWVSKVWNRVEKHKKADFTSIVHGKYSHEETIATISYAKRYLVVLNMEEAEY 214
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V +Y+ LNG T+ FL KF KAVS GFDPD+ L +VGIANQTTMLKGETE IGKL
Sbjct: 215 VSNYM----LNGGDRTE--FLTKFSKAVSTGFDPDLHLQRVGIANQTTMLKGETEAIGKL 268
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
EKT+M K+GVEN+N+HF+S+NTICDATQERQDAM ++VEE +DL++V+
Sbjct: 269 FEKTVMVKYGVENLNQHFLSYNTICDATQERQDAMLEIVEEPLDLMIVIGGYNSSNTTHL 328
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +G+PSY +DS RI N I +K + L + NWLP+G++ IGITSGASTPDK
Sbjct: 329 QEIAIAKGLPSYHVDSSDRIISANTIEHKPLGEPLTQSPNWLPQGKVKIGITSGASTPDK 388
Query: 348 AVEDVLKKVFEIK 360
V DV+ K+F +K
Sbjct: 389 VVADVISKIFSLK 401
>gi|170077142|ref|YP_001733780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7002]
gi|238692815|sp|B1XPG7.1|ISPH_SYNP2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|169884811|gb|ACA98524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7002]
Length = 403
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/376 (59%), Positives = 283/376 (75%), Gaps = 18/376 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY S +I+++++N +E T G+V + LAE++GFCWGVERAV +AYE RK FP EKIW+
Sbjct: 31 MTSEYQSSLIQEIRDNNYELTRGDVTIYLAEAFGFCWGVERAVAMAYETRKHFPTEKIWV 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN RL+EM V I V +G K F V GDVV+LPAFGA V+EM LN++
Sbjct: 91 TNEIIHNPSVNNRLKEMNVHFIEVVDGDKDFSGVANGDVVILPAFGATVQEMQLLNDRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK +YTSIIHGKY HEETVAT+SFAG Y+++ N++EAEYV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKKNYTSIIHGKYKHEETVATSSFAGTYLVLLNLEEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G ++ FL+KFK A S+GFDPD DL +VG+ANQTTMLK ETE++GKL
Sbjct: 211 RNYILHG------GDRQTFLDKFKNAYSEGFDPDKDLDRVGVANQTTMLKSETEQMGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +VE+ +DL++V+
Sbjct: 265 EQTMLEKFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +R IPSY IDS R+ N IA+K + GE+ + +WLP G++ IG+TSGASTPDK
Sbjct: 325 EIAVERNIPSYHIDSGDRLLGNNVIAHKPLDGEITTQTHWLPAGKLKIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEA 364
VEDV+ K+F K + A
Sbjct: 385 VEDVIAKIFAEKAQPA 400
>gi|376002538|ref|ZP_09780365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira sp.
PCC 8005]
gi|375329109|emb|CCE16118.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira sp.
PCC 8005]
Length = 402
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 280/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ Y S +I+++++N + T GNV ++LAE++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 MDSAYQSSLIQQIRQNNYILTQGNVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLRDMNVEFIPVNDSHKDFSVVGSGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SFA KY+++ N++EAEYV
Sbjct: 151 KIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSFADKYLVLLNLEEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL KF A S FDPD DL VGIANQTTMLK ETE+IGKL
Sbjct: 211 ADYILNG------GNREEFLAKFANAYSANFDPDRDLESVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL++V+
Sbjct: 265 ERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E+A +RGIPSY IDS RI GN+I +K ++ +L WLP+G+I +G+TSGASTPD+
Sbjct: 325 EMAIERGIPSYHIDSSDRILEGNQIQHKPLNKDLEMATKWLPEGEIIVGVTSGASTPDRV 384
Query: 349 VEDVLKKVFEIK 360
VE+ ++K+F K
Sbjct: 385 VEEAIQKIFAQK 396
>gi|443311976|ref|ZP_21041598.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechocystis sp. PCC 7509]
gi|442778051|gb|ELR88322.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechocystis sp. PCC 7509]
Length = 398
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/372 (59%), Positives = 282/372 (75%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++++ +++N + T G+V ++LAES+GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 LKTEYQSNLVQLIRDNNYTLTRGDVTIRLAESFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM VQ I V G K F VVN GDVV+LPAFGA+V+EM LN+
Sbjct: 91 TNEIIHNPSVNQRLREMQVQFIEVTNGNKDFSVVNSGDVVILPAFGASVQEMQLLNDLGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEET+AT+SFAGKY+IV N+++AEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYNHEETIATSSFAGKYLIVLNLEQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G G F+ KF +A S+GF+PD DL ++GIANQTTMLK ETE IGKL
Sbjct: 211 ANYILNGGDAGE------FMTKFSRAHSEGFNPDEDLKQIGIANQTTMLKSETELIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMMRK+ + EHF +FNTICDATQERQDAM+++VEEK+DL++V+
Sbjct: 265 ERTMMRKYSPSQLTEHFQTFNTICDATQERQDAMFQLVEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +RGI SY ID +RI N I ++L+ G L +WLPKG ITIG+TSGASTPD
Sbjct: 325 EIAIERGIASYHIDCAERIDT-NGIEHRLLDGNLQLTPHWLPKGAITIGVTSGASTPDIV 383
Query: 349 VEDVLKKVFEIK 360
V D ++K+F +K
Sbjct: 384 VADTVEKIFALK 395
>gi|409992818|ref|ZP_11275987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis str. Paraca]
gi|291568478|dbj|BAI90750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis NIES-39]
gi|409936318|gb|EKN77813.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis str. Paraca]
Length = 402
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 279/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ Y S +I+++++N + T GNV ++LAE++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 MDNAYQSSLIQQIRQNNYILTQGNVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLRDMNVEFIPVNDSDKDFSVVGSGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SFA KY+++ N+ EAEYV
Sbjct: 151 KIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSFADKYLVLLNLAEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL +F A S FDPD DL VGIANQTTMLK ETE+IGKL
Sbjct: 211 ADYILTG------GNREEFLARFANAYSANFDPDRDLESVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL++V+
Sbjct: 265 ERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E+A +RGIPSY IDS RI GNKI +K ++ +L WLP+G+I +G+TSGASTPD+
Sbjct: 325 EMAIERGIPSYHIDSSDRILEGNKIEHKPLNKDLEISAQWLPEGEIIVGVTSGASTPDRV 384
Query: 349 VEDVLKKVFEIK 360
VE+ ++K+F K
Sbjct: 385 VEEAIQKIFAHK 396
>gi|443477268|ref|ZP_21067127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
biceps PCC 7429]
gi|443017634|gb|ELS32032.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
biceps PCC 7429]
Length = 402
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/373 (58%), Positives = 285/373 (76%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M +Y SD+I+ ++++ + YT G+V + LA+S+GFCWGVERAV +AYE R QFP E+IWI
Sbjct: 35 MRSQYHSDLIQTIRDHNYVYTQGDVTIYLAKSFGFCWGVERAVAMAYETRTQFPTERIWI 94
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP+VN +L+EM VQ +PV + G K F V +GDVV+LPAFGA+V+E L++
Sbjct: 95 TNEIIHNPSVNAKLKEMEVQFVPVNDSGVKDFSGVGQGDVVILPAFGASVQETQLLDSLG 154
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
+IVDTTCPWVSKVW VEKHKK D+TSI+HGKY+HEET+AT+S+A +Y++V NMKEAEY
Sbjct: 155 SKIVDTTCPWVSKVWNRVEKHKKADFTSIVHGKYNHEETIATSSYAKRYLVVLNMKEAEY 214
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V +YIL G ++ FL KF KA+S GFDPD DL +VG+ANQTTMLKGETE IGKL
Sbjct: 215 VTNYILKG------GDRQEFLSKFSKAISAGFDPDRDLERVGVANQTTMLKGETEAIGKL 268
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
EKTMM+K+GVENVNEHF++FNTICDATQERQDAM+++VEE +DL++V+
Sbjct: 269 FEKTMMQKYGVENVNEHFLAFNTICDATQERQDAMFEIVEEDLDLMIVIGGYNSSNTTHL 328
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +R +PSY ID RI I +K + + + NWLP G+I+IG+TSGASTPD+
Sbjct: 329 QEIAIERNLPSYHIDDVHRILSAEAIEHKPLGKAIEQAVNWLPTGKISIGVTSGASTPDR 388
Query: 348 AVEDVLKKVFEIK 360
VEDV+ ++F +K
Sbjct: 389 VVEDVINRIFTLK 401
>gi|209524760|ref|ZP_03273307.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira maxima
CS-328]
gi|423067765|ref|ZP_17056555.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira platensis
C1]
gi|209494904|gb|EDZ95212.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira maxima
CS-328]
gi|406710731|gb|EKD05935.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira platensis
C1]
Length = 402
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 279/372 (75%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ Y S +I+++++N + T GNV ++LAE++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 MDSAYQSSLIQQIRQNNYILTQGNVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLRDMNVEFIPVNDSHKDFSVVGSGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SFA KY+++ N++EAEYV
Sbjct: 151 KIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSFADKYLVLLNLEEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G +E FL KF A S FDPD DL VGIANQTTMLK ETE+IGKL
Sbjct: 211 ADYILNG------GNREEFLAKFANAYSANFDPDRDLESVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL++V+
Sbjct: 265 ERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E+A +RGIPSY IDS RI GN I +K ++ +L WLP+G+I +G+TSGASTPD+
Sbjct: 325 EMAIERGIPSYHIDSSDRILEGNTIQHKPLNKDLEMATKWLPEGEIIVGVTSGASTPDRV 384
Query: 349 VEDVLKKVFEIK 360
VE+ ++K+F K
Sbjct: 385 VEEAIQKIFAQK 396
>gi|434388777|ref|YP_007099388.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Chamaesiphon minutus PCC 6605]
gi|428019767|gb|AFY95861.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Chamaesiphon minutus PCC 6605]
Length = 415
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/377 (58%), Positives = 282/377 (74%), Gaps = 20/377 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S++I+++++ + T G+V +KLA+S+GFCWGVERAV IAYE R+ FP E+IWI
Sbjct: 31 LESEYQSNLIQEIRDRNYTLTRGDVTIKLAKSFGFCWGVERAVAIAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I VE G K FD++++GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLREMNVNFIQVENGVKNFDLIDRGDVVILPAFGASVQEMQLLNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW ++EKHKK DYTSIIHG+Y HEETVAT+SFA KY++V NM EA YV
Sbjct: 151 TIVDTTCPWVSKVWNTIEKHKKVDYTSIIHGQYKHEETVATSSFANKYLVVLNMAEANYV 210
Query: 181 CDYILGGELNGSS-----STKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 235
DYIL NG+S + FL KF A S GFDPD+DL KVGIANQTTMLK ETE
Sbjct: 211 ADYILN---NGNSPQEKLQRRNEFLAKFSNACSAGFDPDLDLEKVGIANQTTMLKTETEA 267
Query: 236 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------- 288
IGKL E+TMM+K+ +N+HF SFNTICDATQERQDAM+++V+EK+DL++V+
Sbjct: 268 IGKLFERTMMKKYSTAELNDHFQSFNTICDATQERQDAMFELVDEKLDLMVVIGGYNSSN 327
Query: 289 -----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 343
EI+ + IPSY IDS+ RI N+I +K + EL +NWLP G IT+G+TSGAS
Sbjct: 328 TTHLQEISIEHQIPSYHIDSDVRILADNQIEHKPLFKELEITKNWLPDGPITVGVTSGAS 387
Query: 344 TPDKAVEDVLKKVFEIK 360
TPDK VE ++++F K
Sbjct: 388 TPDKVVEAAIERIFATK 404
>gi|428218816|ref|YP_007103281.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
sp. PCC 7367]
gi|427990598|gb|AFY70853.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
sp. PCC 7367]
Length = 414
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/373 (58%), Positives = 281/373 (75%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY SD+I+ ++E+ + Y+ G+V + LA+S+GFCWGVERAV +AYE R QFP E+IWI
Sbjct: 43 MKTEYNSDLIQTIREHNYVYSEGDVTIYLAKSFGFCWGVERAVAMAYETRSQFPTERIWI 102
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP+VN RL+EMAV IPV E+G K F + +GDVV+LPAFGA+V+E+ L
Sbjct: 103 TNEIIHNPSVNARLKEMAVLFIPVDEQGNKDFTGIQQGDVVILPAFGASVQEIQYLEQVG 162
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
IVDTTCPWVSKVW VEKHKK D+TSIIHGKY HEET+AT+S+A +Y++V NM EAEY
Sbjct: 163 CTIVDTTCPWVSKVWNRVEKHKKSDFTSIIHGKYKHEETIATSSYAKRYLVVLNMAEAEY 222
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V DYIL G ++ FL KF +A S GFDPD DL +GIANQTTMLKGETE+IGKL
Sbjct: 223 VADYILNG------GDRQEFLAKFSQATSAGFDPDRDLQHIGIANQTTMLKGETEDIGKL 276
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
E+TMM+K+GV+N+N+HF+++NTICDATQERQDAM+++VEE +DL++VV
Sbjct: 277 FERTMMQKYGVDNLNQHFLAYNTICDATQERQDAMFEIVEEALDLMVVVGGYNSSNTTHL 336
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +R +PSY IDS +RI I +K + E+++ WLP G+I +GITSGASTPDK
Sbjct: 337 QEIAIERDLPSYHIDSAERILSAQTIEHKPLGKEIIQTHEWLPAGKIRVGITSGASTPDK 396
Query: 348 AVEDVLKKVFEIK 360
V D ++++F K
Sbjct: 397 VVSDAIERIFAFK 409
>gi|148243418|ref|YP_001228575.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RCC307]
gi|166218350|sp|A5GWG3.1|ISPH_SYNR3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|147851728|emb|CAK29222.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RCC307]
Length = 406
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/380 (56%), Positives = 286/380 (75%), Gaps = 20/380 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I+ ++ENG+E G V ++LAE++GFCWGVERAV IAYE R+ +P E+IWI
Sbjct: 31 LEQAYQSELIQSIRENGYELREGRVTIRLAEAFGFCWGVERAVAIAYETRRHYPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V IPVEEG K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNAHLVEMNVLFIPVEEGVKDFSGVESGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVE+HKK +TS+IHGK HEET+AT+SFAG Y++V +++EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNSVERHKKNSFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILG NG+ +EAFL++F A S GFDPD DL ++G+ANQTTMLK ETE+IG+L
Sbjct: 211 CDYILG---NGN---REAFLKRFAGATSPGFDPDRDLSRIGVANQTTMLKSETEDIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+T++R++G ++N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTLLRRYGPTDLNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGIPS ID+ +RIGPGN + +K + +L E +LP+G + IGITSGASTPD+
Sbjct: 325 EIAVSRGIPSVHIDAPERIGPGNAVEHKPLGQDLERLEPFLPEGDLRIGITSGASTPDRV 384
Query: 349 VEDVLKKVFEIKREEALQLA 368
VE V+ ++ ++ EA Q+A
Sbjct: 385 VEGVIDRLLQLA--EAGQIA 402
>gi|254430488|ref|ZP_05044191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobium sp.
PCC 7001]
gi|197624941|gb|EDY37500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobium sp.
PCC 7001]
Length = 408
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/375 (57%), Positives = 284/375 (75%), Gaps = 16/375 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y SD++ KL+ENG+ G + V+LAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEQAYQSDLVAKLRENGYALQRGRLTVRLAEAFGFCWGVERAVAMAYETRRHYPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M VQ IPV+EG K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLRDMDVQFIPVDEGVKDFSDVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHAFTSIIHGKVKHEETLATSSFAGTYLVVLDLAEAQLV 210
Query: 181 CDYILGG----ELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
CDY+L G + ++ +EAF+ +F KA S GFDPD DL++VG+ANQTTMLK ETEEI
Sbjct: 211 CDYVLLGARDVDAATRTAAREAFMARFAKACSPGFDPDRDLIRVGVANQTTMLKSETEEI 270
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
G+LVE+TM++++G +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 271 GRLVERTMLQRYGPTELNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNT 330
Query: 289 ----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 344
EIA RGI S+ ID+ +RIGPGN+I +K + GEL +E +LP G I +GITSGAST
Sbjct: 331 THLQEIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGELQLEEPFLPAGPIRVGITSGAST 390
Query: 345 PDKAVEDVLKKVFEI 359
PD+ VE V++++ ++
Sbjct: 391 PDRIVEAVIERLIDL 405
>gi|412991558|emb|CCO16403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bathycoccus
prasinos]
Length = 471
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/373 (60%), Positives = 282/373 (75%), Gaps = 18/373 (4%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++ ++KE F + G V VKLA+SYGFCWGVERAVQ+ YEARKQ+P EK+WITNEIIHNP
Sbjct: 103 LVAQMKEKNFVHVEGEVTVKLADSYGFCWGVERAVQMCYEARKQYPTEKMWITNEIIHNP 162
Query: 69 TVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCP 128
TVN RL EM V I + G K F+ V G+VVVLPAFGA++ EM L K V IVDTTCP
Sbjct: 163 TVNMRLSEMGVNFIEEKGGVKNFEPVQSGEVVVLPAFGASIHEMKLLAEKGVSIVDTTCP 222
Query: 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE 188
WVSKVW +V+ H + ++TSIIHGKY+HEETVATASFA Y++VK+MKEA +VCDYIL G
Sbjct: 223 WVSKVWNAVDTHARKEFTSIIHGKYAHEETVATASFAKTYLVVKDMKEASWVCDYILNG- 281
Query: 189 LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF 248
++TKE F+EKFK A S GFDP+ DL VG+ANQTTMLKGETE IGKL E+TMM K
Sbjct: 282 ----TATKEEFMEKFKNAHSDGFDPEKDLDAVGVANQTTMLKGETEAIGKLFERTMMEKH 337
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI 296
GV+N+ EH++ +TICDATQERQDA+YK+V+EK D++++V EI+ED I
Sbjct: 338 GVQNLGEHYLVTDTICDATQERQDAIYKLVDEKPDIMMIVGGFNSSNTSHLQEISEDANI 397
Query: 297 PSYWIDSEKRIGP-GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKK 355
S+W+D+ RI NKI+++ HGE+ E ENWLP+G++T+GITSGASTPDK VEDVL+
Sbjct: 398 TSFWVDTADRIDTENNKISWRTSHGEMRETENWLPEGKLTVGITSGASTPDKVVEDVLEA 457
Query: 356 VFEIKREEALQLA 368
+F K + A +A
Sbjct: 458 IFASKAKTAAGVA 470
>gi|119486460|ref|ZP_01620518.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lyngbya sp. PCC
8106]
gi|119456362|gb|EAW37493.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lyngbya sp. PCC
8106]
Length = 402
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M Y S +I++++EN + GNV ++LAE++GFCWGVERAV +AYE R+ FP E+IWI
Sbjct: 31 MQSAYQSSLIQQIRENNYTLERGNVTIRLAEAFGFCWGVERAVAMAYETRQHFPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L +M V+ IPV +G+K F + GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQHLLDMKVEFIPVIDGEKDFSGIGIGDVVILPAFGASVQEMQILNDKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SFA KY++V N+ +AEYV
Sbjct: 151 KIVDTTCPWVSKVWNTVEKHKKKSYTSIIHGKYKHEETVATSSFADKYLVVLNLAQAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G ++ F KFK A S+GFDPD DL VGIANQTTMLK ETE+IGKL
Sbjct: 211 CNYILNG------GNRQEFFAKFKHAHSEGFDPDKDLECVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+T+M+K+G + + EHF SFNTICDATQERQDAM +VEEK+DL++V+
Sbjct: 265 ERTVMQKYGPDQLTEHFQSFNTICDATQERQDAMLGLVEEKLDLMIVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E++ +RGI SY IDS +RI G+ I +K + ++ ENWLP+G+I +GITSGASTPDKA
Sbjct: 325 EMSIERGISSYHIDSPERIISGDCIEHKPLEKDIEIAENWLPEGKIVVGITSGASTPDKA 384
Query: 349 VEDVLKKVFEIK 360
VEDV+ K+FE+K
Sbjct: 385 VEDVIDKIFELK 396
>gi|8928192|sp|Q55643.2|ISPH_SYNY3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|1256595|gb|AAB72119.1| LytB [Synechocystis sp. PCC 6803]
gi|407961260|dbj|BAM54500.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Bacillus
subtilis BEST7613]
Length = 379
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/377 (58%), Positives = 282/377 (74%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WI
Sbjct: 4 MNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWI 63
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+VEEM LN++
Sbjct: 64 TNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASVEEMQLLNDREC 123
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK ++TSIIHGKY+HEET+AT+SFAG Y+IV NM EA+ V
Sbjct: 124 TIVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSFAGTYLIVLNMAEAQKV 183
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G ++ FL+ F A S GFDPD DLV++G+ANQTTMLK ETE IGKL
Sbjct: 184 CDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVANQTTMLKSETEMIGKLF 237
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L++V+
Sbjct: 238 EKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQ 297
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + GIPS IDS RIGPGN++ +K + +L E WLP G+IT+G+TSGASTPDK
Sbjct: 298 EIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKV 357
Query: 349 VEDVLKKVFEIKREEAL 365
VE+V+KK+ IK + +
Sbjct: 358 VEEVMKKILAIKEAQPV 374
>gi|16331361|ref|NP_442089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechocystis
sp. PCC 6803]
gi|383323102|ref|YP_005383955.1| hypothetical protein SYNGTI_2193 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326271|ref|YP_005387124.1| hypothetical protein SYNPCCP_2192 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492155|ref|YP_005409831.1| hypothetical protein SYNPCCN_2192 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437423|ref|YP_005652147.1| hypothetical protein SYNGTS_2194 [Synechocystis sp. PCC 6803]
gi|451815514|ref|YP_007451966.1| hypothetical protein MYO_122140 [Synechocystis sp. PCC 6803]
gi|1001532|dbj|BAA10159.1| slr0348 [Synechocystis sp. PCC 6803]
gi|339274455|dbj|BAK50942.1| hypothetical protein SYNGTS_2194 [Synechocystis sp. PCC 6803]
gi|359272421|dbj|BAL29940.1| hypothetical protein SYNGTI_2193 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275591|dbj|BAL33109.1| hypothetical protein SYNPCCN_2192 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278761|dbj|BAL36278.1| hypothetical protein SYNPCCP_2192 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781483|gb|AGF52452.1| hypothetical protein MYO_122140 [Synechocystis sp. PCC 6803]
Length = 406
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/377 (58%), Positives = 282/377 (74%), Gaps = 18/377 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WI
Sbjct: 31 MNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+VEEM LN++
Sbjct: 91 TNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASVEEMQLLNDREC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK ++TSIIHGKY+HEET+AT+SFAG Y+IV NM EA+ V
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSFAGTYLIVLNMAEAQKV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G ++ FL+ F A S GFDPD DLV++G+ANQTTMLK ETE IGKL
Sbjct: 211 CDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVANQTTMLKSETEMIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L++V+
Sbjct: 265 EKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + GIPS IDS RIGPGN++ +K + +L E WLP G+IT+G+TSGASTPDK
Sbjct: 325 EIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKREEAL 365
VE+V+KK+ IK + +
Sbjct: 385 VEEVMKKILAIKEAQPV 401
>gi|218247399|ref|YP_002372770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 8801]
gi|257061267|ref|YP_003139155.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 8802]
gi|226722803|sp|B7K4V8.1|ISPH_CYAP8 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|218167877|gb|ACK66614.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
8801]
gi|256591433|gb|ACV02320.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
8802]
Length = 403
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/375 (58%), Positives = 281/375 (74%), Gaps = 18/375 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+++++N +++ GNV + LA+++GFCWGVERAV +AYE R+ FP+E IWI
Sbjct: 31 MNTEYQSSLIQQIRQNNYQWKQGNVTIHLAQAFGFCWGVERAVAMAYETRQHFPKESIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNE+IH+P+VN+RLE+M ++ I V G+K F + GDVV+LPAFGA+V EM LN++
Sbjct: 91 TNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQIKSGDVVILPAFGASVSEMQLLNDRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SFAG Y++V N+++A YV
Sbjct: 151 TIVDTTCPWVSKVWNSVEKHKKRHYTSIIHGKYRHEETVATSSFAGTYLVVLNLEQATYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYIL G KE FL KFK A S+GFDPD DL KVGIANQTTMLK ETE+IGKL
Sbjct: 211 CDYILKG------GNKEEFLAKFKNAYSEGFDPDTDLEKVGIANQTTMLKSETEQIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM++K+G +N+HF+SFNTICDATQERQDAM ++V+EK+DL++V+
Sbjct: 265 EGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EI +GI SY ID+ RI P N I +K + +L KENWLP+G I +GITSGASTPD
Sbjct: 325 EIPIYQGITSYHIDNATRIKPNNCIEHKPLGKDLEIKENWLPEGSIVVGITSGASTPDII 384
Query: 349 VEDVLKKVFEIKREE 363
VE V++K+F K E
Sbjct: 385 VEAVIEKIFSAKELE 399
>gi|194476978|ref|YP_002049157.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Paulinella
chromatophora]
gi|171191985|gb|ACB42947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Paulinella
chromatophora]
Length = 402
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/373 (57%), Positives = 281/373 (75%), Gaps = 16/373 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I ++ENG+ G ++V+LAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEQAYQSELIGSIRENGYGLKNGRLQVRLAEAFGFCWGVERAVAMAYETRRHYPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V IPV+EG K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLHEMNVLFIPVKEGVKDFSEVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SFA Y++V +++EA V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHEFTSIIHGKVKHEETLATSSFADTYLVVLDLEEARLV 210
Query: 181 CDYIL-GGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
CDYIL GEL G+ EAF+ +F KA S GFDPD DL++VG+ANQTTMLK ETEEIG+L
Sbjct: 211 CDYILDSGELKGN---HEAFMLRFAKACSPGFDPDHDLLRVGVANQTTMLKRETEEIGRL 267
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
E+TM+++FG +NEHF+SFNTICDATQERQDAM+ +VEE +DL++V+
Sbjct: 268 FEQTMLQRFGPAALNEHFLSFNTICDATQERQDAMFALVEEPLDLLVVIGGYNSSNTTHL 327
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RG+ ++ ID+ +RIGPGN+I +K + EL ++N+LP G + +GITSGASTPD+
Sbjct: 328 QEIAVSRGLRAFHIDTPERIGPGNRITHKPLGEELTVEDNFLPDGLLRVGITSGASTPDR 387
Query: 348 AVEDVLKKVFEIK 360
VEDV+ ++ +
Sbjct: 388 VVEDVIHRLIALS 400
>gi|255078788|ref|XP_002502974.1| predicted protein [Micromonas sp. RCC299]
gi|226518240|gb|ACO64232.1| predicted protein [Micromonas sp. RCC299]
Length = 380
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/369 (59%), Positives = 280/369 (75%), Gaps = 19/369 (5%)
Query: 7 SDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIH 66
S ++ K++E+G + G+V KLAE+YGFCWGVERAVQ+AYEA+KQFP+ +WITNEIIH
Sbjct: 11 SGLVAKMRESGNVHVDGDVTFKLAEAYGFCWGVERAVQMAYEAKKQFPDANLWITNEIIH 70
Query: 67 NPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTT 126
NPTVN RL EM VQ I K F +G+VV+LPAFGA+V EM LN+K V IVDTT
Sbjct: 71 NPTVNDRLGEMGVQFIEETAEGKDFSGCKEGEVVILPAFGASVHEMKLLNDKGVNIVDTT 130
Query: 127 CPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG 186
CPWVSKVW +V+ H + ++TSIIHGK++HEET+ATASFA Y++VK+MKEA+YVCDY+L
Sbjct: 131 CPWVSKVWNAVDAHTRKEFTSIIHGKWAHEETIATASFAKTYLVVKDMKEAQYVCDYVLD 190
Query: 187 GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 246
G +E FL KFK A S+GFDPD DL +GIANQTTMLKGETE IGKL+EKTMM+
Sbjct: 191 G------GDREEFLAKFKNAYSEGFDPDTDLGALGIANQTTMLKGETEAIGKLLEKTMMQ 244
Query: 247 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDR 294
K GV+ +N+H++ +TICDATQERQDAMYK+V++K D++LVV EI+ED
Sbjct: 245 KHGVDKLNDHYMVMDTICDATQERQDAMYKLVDDKPDMMLVVGGFNSSNTSHLQEISEDA 304
Query: 295 GIPSYWIDSEKRI-GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
IPS+W+D+ R+ N I ++L HGELVE ++WLP G++TIG+TSGASTPDK VEDV+
Sbjct: 305 SIPSFWVDTHARLDADTNTITHRLAHGELVETKDWLPAGKVTIGVTSGASTPDKVVEDVI 364
Query: 354 KKVFEIKRE 362
+ K++
Sbjct: 365 DVIMATKKK 373
>gi|254423787|ref|ZP_05037505.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7335]
gi|196191276|gb|EDX86240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7335]
Length = 406
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/373 (59%), Positives = 280/373 (75%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M EY S++I+K++ NG G V + LAES+GFCWGVERAV +AYEAR FPE+++WI
Sbjct: 32 MRSEYESNLIQKIRANGNLLVDGEVTIHLAESFGFCWGVERAVAMAYEARAHFPEQRLWI 91
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN++L+ M V I V+ G K F V +GDVV+LPAFGA+V+EM L++K
Sbjct: 92 TNEIIHNPEVNQQLKAMDVHFIEVKTGTKDFSGVGRGDVVILPAFGASVQEMKLLHDKGC 151
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGKY HEETVAT SFAG Y++V N+ EAEYV
Sbjct: 152 TIVDTTCPWVSKVWNTVEKHKKKAFTSIIHGKYKHEETVATTSFAGTYLVVLNLAEAEYV 211
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G +E FL KF A S+GFDPD DL VGIANQTTMLKGETE+IGKL
Sbjct: 212 ANYILEG------GDREDFLTKFTNAHSEGFDPDRDLDAVGIANQTTMLKGETEQIGKLF 265
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G N HF SFNTICDATQERQDAM+ +VE +DL++V+
Sbjct: 266 ERTMLKKYGPVEFNHHFHSFNTICDATQERQDAMFSLVEADIDLMVVIGGFNSSNTTHLQ 325
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPKGQITIGITSGASTPDK 347
EIA +R +PS+ IDS +R+GPGN+I +K +H EL + +WLP G+I++G+TSGASTPDK
Sbjct: 326 EIAVERSLPSFHIDSAERVGPGNRIEHKPLHSDELSVELDWLPAGKISVGVTSGASTPDK 385
Query: 348 AVEDVLKKVFEIK 360
AV++V++K+F IK
Sbjct: 386 AVQEVIEKIFAIK 398
>gi|443328031|ref|ZP_21056635.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Xenococcus sp. PCC 7305]
gi|442792340|gb|ELS01823.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Xenococcus sp. PCC 7305]
Length = 398
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/373 (59%), Positives = 276/373 (73%), Gaps = 18/373 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+N EY S++I+ +++N + GNV ++LAE++GFCWGVERAV +AYE R+ FP E IWI
Sbjct: 32 LNAEYQSNLIQTIRDNNYRLQRGNVTIRLAEAFGFCWGVERAVAMAYETRQHFPTETIWI 91
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL+EM V IPV +G K F VV+ G+VV+LPAFGA+V EM LN+K
Sbjct: 92 TNEIIHNPSVNERLKEMNVGFIPVIDGVKDFSVVSSGEVVILPAFGASVTEMQLLNDKGC 151
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW SVEKHKK D TSIIHGKY HEETVAT+SFAG Y++V N+++A YV
Sbjct: 152 TIVDTTCPWVSKVWNSVEKHKKRDCTSIIHGKYKHEETVATSSFAGTYLVVLNLEQANYV 211
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYIL G K FL KF A S+GFDPD DL KVG+ANQTTMLK ETE+IGKL
Sbjct: 212 ADYILNG------GDKTEFLAKFVHAHSEGFDPDRDLEKVGVANQTTMLKSETEQIGKLF 265
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++K+G +N HF+SFNTICDATQERQDAM +VEE + L+LV+
Sbjct: 266 EQTMLKKYGPLELNNHFMSFNTICDATQERQDAMLDLVEEDLSLMLVIGGFNSSNTTHLQ 325
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA + SY IDS RI P N I +K + ++ +ENWLP G+IT+G+TSGASTPDK
Sbjct: 326 EIAIAKNFTSYHIDSSDRIKPDNTIEHKPLEKDIEVQENWLPSGKITVGVTSGASTPDKV 385
Query: 349 VEDVLKKVFEIKR 361
V D ++K+F +KR
Sbjct: 386 VADAIEKIFALKR 398
>gi|307108197|gb|EFN56438.1| hypothetical protein CHLNCDRAFT_59658 [Chlorella variabilis]
Length = 505
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/374 (58%), Positives = 288/374 (77%), Gaps = 25/374 (6%)
Query: 6 TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEII 65
T+ ++ +++E G+ + G+V VKLAE+YGFCWGVERAVQ+AYEAR+ +P +++ ITNEII
Sbjct: 115 TAGLVAQMREQGYAWRQGDVNVKLAEAYGFCWGVERAVQMAYEARRAYPGQRLHITNEII 174
Query: 66 HNPTVNKRLEEMAVQNIP-VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
HNP+VN+RL+EM VQ I +G K F V +G+VV+LPAFGA+V+EM LN++NVQIVD
Sbjct: 175 HNPSVNQRLKEMDVQFIDEGADGGKDFSGVKEGEVVILPAFGASVQEMRLLNDRNVQIVD 234
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYI 184
TTCPWVSKVW +V+ + +TSIIHGK++HEET+ATASFAG Y+IVK++KEA+YVCDYI
Sbjct: 235 TTCPWVSKVWNAVDNQARKGHTSIIHGKWAHEETIATASFAGTYLIVKDLKEAQYVCDYI 294
Query: 185 LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTM 244
+ G + FL KF+ A+S GFDP+ DL ++G+ANQTTMLKGETE IGKL+EKT
Sbjct: 295 MHG------GDRAEFLAKFENAMSAGFDPEQDLQRIGMANQTTMLKGETEAIGKLLEKTQ 348
Query: 245 MRKFGVENVNEHFISFNTICDATQERQDAMYKMV-----EEKVDLILVV----------- 288
++K+G +++ F+ +TICDATQERQDA+YK+V E +D++LVV
Sbjct: 349 LQKYGPGELSQRFMIMDTICDATQERQDAVYKLVGQQSTPEGIDMMLVVGGFNSSNTSHL 408
Query: 289 -EIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EI E +GIPS+W+DS RI G NK+ +KL HGELVE ENWLP+G IT+G+TSGASTPD
Sbjct: 409 QEIGEMKGIPSFWVDSAARIDVGANKVTHKLAHGELVETENWLPEGPITLGVTSGASTPD 468
Query: 347 KAVEDVLKKVFEIK 360
KAVEDVL +VF IK
Sbjct: 469 KAVEDVLDRVFRIK 482
>gi|303278956|ref|XP_003058771.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459931|gb|EEH57226.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 523
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 279/374 (74%), Gaps = 20/374 (5%)
Query: 2 NQEYTSDIIKKLKENGFEYTWG--NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
N T ++ K++E+G Y V +KLA++YGFCWGVERAVQ+AYEARKQ+P+ K+W
Sbjct: 147 NPNSTDGLVAKMRESGNSYVDAETGVTLKLADAYGFCWGVERAVQMAYEARKQYPDAKLW 206
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
ITNEIIHNPTVNKRL +M V I + K F V G+VV+LPAFGA+V EM L K
Sbjct: 207 ITNEIIHNPTVNKRLGDMGVNFIEETKDGKDFSGVGNGEVVILPAFGASVHEMKLLAEKG 266
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
IVDTTCPWVSKVW +V+ H + ++TSIIHGK++HEETVATASFAG Y+++K+MKEA Y
Sbjct: 267 ASIVDTTCPWVSKVWNAVDAHTRKEFTSIIHGKWAHEETVATASFAGTYLVIKDMKEATY 326
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
+CDYIL G KE F+ KF A S+GFDPDVDL +GIANQTTMLKGET+ IGKL
Sbjct: 327 LCDYILNG------GDKEEFMAKFVNAHSEGFDPDVDLDGLGIANQTTMLKGETQAIGKL 380
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
+E+TMM K GV N+ +H++ +TICDATQERQDAMY++VE+K D++LVV
Sbjct: 381 LERTMMEKHGVANLADHYMVMDTICDATQERQDAMYQLVEDKPDMMLVVGGYNSSNTQHL 440
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EI+ED +PS+W+D+ +R+ N IA++L HGELVE ++WLP+G + IG+TSGASTPDK
Sbjct: 441 QEISEDASVPSFWVDTPERLDEDNVIAHRLAHGELVETKDWLPEGDVVIGVTSGASTPDK 500
Query: 348 AVEDVLKKVFEIKR 361
VEDV+ +F+ KR
Sbjct: 501 VVEDVVDMIFKTKR 514
>gi|317968619|ref|ZP_07970009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CB0205]
Length = 406
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/373 (57%), Positives = 276/373 (73%), Gaps = 14/373 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I ++ENG+E G ++VKLAE++GFCWGVERAV +AYE RK +P E+IWI
Sbjct: 31 LEQAYQSNLIASIRENGYELKHGRLQVKLAEAFGFCWGVERAVAMAYETRKHYPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V I VE G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVLFIDVENGVKDFSKVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK D TSIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHDITSIIHGKVKHEETLATSSFAGTYLVVLDLAEAQLV 210
Query: 181 CDYILG--GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
CDYIL G + S+ ++AF+E+F A S GFDPD DL +VG+ANQTTMLK ETEEIG+
Sbjct: 211 CDYILASSGGASPSAEQRQAFMERFSNACSPGFDPDRDLARVGVANQTTMLKSETEEIGR 270
Query: 239 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV---------- 288
L E+TM+++FG +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 271 LFERTMLKRFGPAELNDHFLAFNTICDATQERQDAMFALVDEPLDLMVVIGGYNSSNTTH 330
Query: 289 --EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EIA RGI S+ ID+ +RIGP N+I +K + EL E +LP G + +GITSGASTPD
Sbjct: 331 LQEIAITRGIRSFHIDTPERIGPSNRIEHKPLGTELEVVEPFLPSGPLRVGITSGASTPD 390
Query: 347 KAVEDVLKKVFEI 359
+ VEDV+ ++ +
Sbjct: 391 RVVEDVISRLMAL 403
>gi|284929156|ref|YP_003421678.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[cyanobacterium UCYN-A]
gi|284809615|gb|ADB95320.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[cyanobacterium UCYN-A]
Length = 400
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/373 (58%), Positives = 282/373 (75%), Gaps = 18/373 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN EY S +I+K++ N + + G++ + LAE++GFCWGVERAV +AYE R+ F +++IWI
Sbjct: 31 MNTEYQSSLIQKIRNNNYRWQQGDITIHLAEAFGFCWGVERAVAMAYETRQHFADKQIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL EM V I + K F VV +GDVV+LPAFGA+V EM LN+
Sbjct: 91 TNEIIHNPSVNQRLLEMNVGFIKIVGENKDFSVVKQGDVVILPAFGASVTEMQFLNSIGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW SVEKHKK D+TSIIHGKY HEETVAT+SFAG Y++V N++EA YV
Sbjct: 151 TIIDTTCPWVSKVWNSVEKHKKRDHTSIIHGKYKHEETVATSSFAGTYLVVLNLEEAAYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDY+L G K+ FLEKF+ A S+ FDPD DL+K+GIANQTTMLK ETE+IGK+
Sbjct: 211 CDYMLNG------GNKKLFLEKFQNACSEDFDPDKDLIKLGIANQTTMLKSETEQIGKMF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE + L++V+
Sbjct: 265 EMTILKKYGPIELNKHFMSFNTICDATQERQDAMLNLVEENISLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA ++GIPSY IDSEKRI GN+I +K + +LV ++NWLP + IG+TSGASTPDK
Sbjct: 325 EIAIEKGIPSYHIDSEKRILLGNRIEHKPLTQDLVVQDNWLPNTPLVIGVTSGASTPDKV 384
Query: 349 VEDVLKKVFEIKR 361
VE V+K++F+ K+
Sbjct: 385 VEAVVKRIFQAKK 397
>gi|318042747|ref|ZP_07974703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CB0101]
Length = 398
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/371 (56%), Positives = 276/371 (74%), Gaps = 18/371 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I L+ENG++ G + VKLAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEQAYQSNLIASLRENGYQLQHGRLSVKLAEAFGFCWGVERAVAMAYETRRHYPTERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V IPV+ G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMNVLFIPVDGGVKDFSNVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK TSIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHAITSIIHGKVKHEETLATSSFAGTYLVVLDLAEAQLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILG +++F+ +F KA S GFDPD DL +VG+ANQTTMLK ETEEIG++
Sbjct: 211 CDYILG------KGDRDSFMARFAKACSPGFDPDRDLSRVGVANQTTMLKSETEEIGRMF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+++FG +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLQRFGPVELNDHFVAFNTICDATQERQDAMFALVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIGPGN+I +K + G+L E +LP+G + +GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGDLEVVEPFLPEGTLRVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEI 359
VEDV+ ++ ++
Sbjct: 385 VEDVISRLIDL 395
>gi|87125110|ref|ZP_01080957.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
RS9917]
gi|86167430|gb|EAQ68690.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
RS9917]
Length = 398
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 275/372 (73%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++N + T G + V+LAE++GFCWGVERAV +AYE R+ +P E++WI
Sbjct: 31 LEQAYQSGLIGSIRDNDYRLTQGRLTVRLAEAFGFCWGVERAVAMAYETRRHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V+ IPV++G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVRFIPVDQGVKDFSDVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA V
Sbjct: 151 HIVDTTCPWVSKVWTTVEKHKKHAFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEARLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +EAF+ +F +A S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 SDYILG------QGDREAFMARFARACSPGFDPDRDLERLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPTRLNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RI P N I +K + G+LV + ++LP G +T+GITSGASTPD+A
Sbjct: 325 EIAISRGIRSFHIDTPERIDPDNSIEHKPLGGDLVHETDFLPPGPVTVGITSGASTPDRA 384
Query: 349 VEDVLKKVFEIK 360
VE V++++ +
Sbjct: 385 VEQVIQRLIALS 396
>gi|87301960|ref|ZP_01084794.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 5701]
gi|87283528|gb|EAQ75483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 5701]
Length = 398
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 274/371 (73%), Gaps = 18/371 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I ++ENG+E G + V+LAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEQAYQSELIATIRENGYELRQGRLTVRLAEAFGFCWGVERAVAMAYETRRHYPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V I VEEG K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNAHLRDMNVLFIRVEEGVKDFSEVGVGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK ++SIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHAFSSIIHGKVKHEETLATSSFAGTYLVVLDLAEAQMV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
CDYILG +EAF+ F KA S GFDPD DL +VG+ANQTTMLK ETEEIG++
Sbjct: 211 CDYILG------KGDREAFISHFAKASSPGFDPDRDLARVGVANQTTMLKSETEEIGRMF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++++G +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLQRYGPAELNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIGPGN+I + + G+L +LP+G + +GITSGASTPD+
Sbjct: 325 EIAISRGIRSFHIDTPERIGPGNRIEHMPLGGDLEVLAPFLPEGPLRVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEI 359
VEDV++ + E+
Sbjct: 385 VEDVIRHLMEL 395
>gi|452824046|gb|EME31052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Galdieria
sulphuraria]
Length = 485
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 278/374 (74%), Gaps = 19/374 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
MN E++S ++++ K E G V VKLA+SYGFCWGVERAV +A E RK FP++KIWI
Sbjct: 113 MNSEFSSTLLQEAKAGNNEIRSGQVTVKLADSYGFCWGVERAVAMALETRKHFPKQKIWI 172
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN RL E+ VQ +P ++ + F V+ DVV+LPAFGA + EM L+N
Sbjct: 173 TNEIIHNPKVNARLAELNVQFVPHKDFVRDFSAVSSEDVVILPAFGATLSEMEYLSNLGC 232
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW SV+KHK+ + TS+IHGK++HEET+ATASF+ KYIIV N+++A+YV
Sbjct: 233 QIVDTTCPWVSKVWNSVDKHKRANCTSVIHGKWNHEETIATASFSEKYIIVLNIEQAQYV 292
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C YIL G K F+ KFK A+S GFDPD DL VGIANQTTMLK ET I KL
Sbjct: 293 CKYILYG------GDKNEFISKFKYAISSGFDPDTDLEAVGIANQTTMLKNETNAIAKLF 346
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++KFG + +++HFI+FNTICDATQERQDAM ++E+ +DL+LVV
Sbjct: 347 EETMLKKFGPQELSKHFIAFNTICDATQERQDAMLHLIEQPLDLVLVVGGFNSSNTSHLQ 406
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPKGQITIGITSGASTPDK 347
EIAE +GIPSY+ID +RIGP N+I ++ EL+EKEN+L +G +T+G+TSGASTPDK
Sbjct: 407 EIAERKGIPSYYIDGPERIGPQNRIVFRSSSSQELIEKENFLKQGPVTVGVTSGASTPDK 466
Query: 348 AVEDVLKKVFEIKR 361
VEDVL++VF I +
Sbjct: 467 IVEDVLERVFMIHK 480
>gi|88808029|ref|ZP_01123540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7805]
gi|88788068|gb|EAR19224.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7805]
Length = 399
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/374 (55%), Positives = 276/374 (73%), Gaps = 18/374 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG++ G ++V+LA+ +GFCWGVERAV +AYE RK +P E++WI
Sbjct: 31 LEQAYQSSLIGSIRDNGYQLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPGERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQIV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +++F+ +F KA S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG------EGDRDSFMARFSKACSPGFDPDQDLKRLGVANQTTMLKRETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +RGI S+ ID+ +RI N I +K + EL+ ++N+LP G +T+GITSGASTPD+
Sbjct: 325 EIAINRGIRSFHIDTPERISADNSIEHKPLGQELIREQNFLPGGTVTVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEIKRE 362
VE V++++ + E
Sbjct: 385 VEHVIQQLISLSEE 398
>gi|148238632|ref|YP_001224019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7803]
gi|166218349|sp|A5GIF7.1|ISPH_SYNPW RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|147847171|emb|CAK22722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7803]
Length = 399
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/374 (55%), Positives = 275/374 (73%), Gaps = 18/374 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG+ G ++V+LA+ +GFCWGVERAV +AYE RK +P E++WI
Sbjct: 31 LEQAYQSSLIGSIRDNGYRLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQIV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG NG +++F+ +F KA S GFDPD DL K+G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG---NGD---RDSFMARFSKACSPGFDPDQDLEKLGVANQTTMLKRETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA +RGI S+ ID+ +RI N I +K + EL+ + +LP G +T+GITSGASTPD+
Sbjct: 325 EIAINRGIRSFHIDTPERISADNSIEHKPLGQELIRELEFLPSGTVTVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEIKRE 362
VE V++++ + E
Sbjct: 385 VEHVIQRLISLSEE 398
>gi|427703322|ref|YP_007046544.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cyanobium gracile PCC 6307]
gi|427346490|gb|AFY29203.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cyanobium gracile PCC 6307]
Length = 402
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/374 (55%), Positives = 277/374 (74%), Gaps = 14/374 (3%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I L+ENG G +K++LAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEQAYQSNLIASLRENGHVLQRGRLKIRLAEAFGFCWGVERAVAMAYETRRHYPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ IPV++ K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNAHLRQMDVRFIPVDDDVKDFSEVGTGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V ++ EA V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHAFTSIIHGKVKHEETLATSSFAGTYLVVLDLAEARMV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
D+IL E ++ +EAF+ F A S GFDPD DLV+VG+ANQTTMLK ETEEIG+L
Sbjct: 211 SDFIL--ERGQGATDREAFMRHFANACSPGFDPDRDLVRVGVANQTTMLKSETEEIGRLF 268
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++++G ++EHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 269 ERTMLQRYGPAELDEHFLAFNTICDATQERQDAMFALVDEPLDLMVVIGGYNSSNTTHLQ 328
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIGPGN+I +K + GEL + +LP+G + +GITSGASTPD+
Sbjct: 329 EIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGELEILKPFLPEGPVRVGITSGASTPDRV 388
Query: 349 VEDVLKKVFEIKRE 362
VEDV++++ + E
Sbjct: 389 VEDVIERLVGLSEE 402
>gi|113953201|ref|YP_729527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9311]
gi|122945839|sp|Q0IDE5.1|ISPH_SYNS3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|113880552|gb|ABI45510.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9311]
Length = 398
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 272/372 (73%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG+ T G +KV+LAE++GFCWGVERAV +AYE R+ +P+E+IWI
Sbjct: 31 LEQAYQSSLIGSIRDNGYSLTHGRLKVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V I VE G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVATGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA V
Sbjct: 151 HIVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEARLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +E+F+E+F KA S GFDPD DL +G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG------KGNRESFMERFSKACSPGFDPDRDLEHLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G ++NEHF++FNTICDATQERQDAM+ +V+E VDL++V+
Sbjct: 265 ERTMLSKYGPTDLNEHFLAFNTICDATQERQDAMFSLVDETVDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RI N I +K + EL +E +LP G +T+GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIHTDNSIEHKPLGEELTVEELFLPSGPVTVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEIK 360
VE V++++ +
Sbjct: 385 VEHVIQRLIALS 396
>gi|78211798|ref|YP_380577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9605]
gi|123578913|sp|Q3AN10.1|ISPH_SYNSC RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78196257|gb|ABB34022.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
CC9605]
Length = 399
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/373 (55%), Positives = 278/373 (74%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG+ G + V+LAE++GFCWGVERAV +AYE RK +P E++WI
Sbjct: 31 LEQAYQSGLIGTIRDNGYRLEHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA+YV
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG NG +E F+++F KA S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG---NGD---REDFIKRFAKACSPGFDPDRDLERLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPTQLNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ +RI G N I +K + +L + ++LP+G + +GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIDVGSNSIEHKPLAADLCREGDFLPEGPVRVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEIK 360
AVE+V++K+ ++
Sbjct: 385 AVEEVIEKLMQLS 397
>gi|260435874|ref|ZP_05789844.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8109]
gi|260413748|gb|EEX07044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8109]
Length = 399
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/373 (55%), Positives = 278/373 (74%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG+ G + V+LAE++GFCWGVERAV +AYE RK +P E++WI
Sbjct: 31 LEQAYQSGLIGTIRDNGYRLDHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA+YV
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG NG ++ F+++F KA S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG---NGD---RDDFIQRFAKACSPGFDPDRDLERLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPTQLNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ +RI G N I +K + EL + ++LP+G + +GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIDVGTNSIEHKPLAAELCCEGDFLPEGPVRVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEIK 360
AVE+V++K+ ++
Sbjct: 385 AVEEVIEKLMQLS 397
>gi|33864788|ref|NP_896347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8102]
gi|50400950|sp|Q7U9K4.1|ISPH_SYNPX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33632311|emb|CAE06767.1| LytB protein homolog [Synechococcus sp. WH 8102]
Length = 399
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/370 (55%), Positives = 273/370 (73%), Gaps = 19/370 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG++ + G + V+LAE++GFCWGVERAV +AYE RK +P E++WI
Sbjct: 31 LEQAYQSGLIGTIRDNGYKLSHGRLTVRLAEAFGFCWGVERAVAMAYETRKHYPAERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWT+VEKHKK TSIIHGK HEET+AT+SFAG Y++V +M+EA+ V
Sbjct: 151 HIVDTTCPWVSKVWTTVEKHKKHTITSIIHGKVKHEETLATSSFAGTYLVVLDMEEAQIV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG ++AF+++F A S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG------KGDRDAFMQRFSAACSPGFDPDRDLSRLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPAELNDHFVAFNTICDATQERQDAMFSLVDEPLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRI-GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ R+ N I +K ++ L + N+LP G +T+GITSGASTPD+
Sbjct: 325 EIALSRGIRSFHIDTPDRLDAQANAIEHKPLNENLRLESNFLPAGPVTVGITSGASTPDR 384
Query: 348 AVEDVLKKVF 357
AVE+V++K+
Sbjct: 385 AVEEVIEKLM 394
>gi|116075604|ref|ZP_01472863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RS9916]
gi|116066919|gb|EAU72674.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RS9916]
Length = 398
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/368 (55%), Positives = 272/368 (73%), Gaps = 18/368 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++N + T G + V+LAE++GFCWGVERAV +AYE RK +P+E+IWI
Sbjct: 31 LEQAYQSGLIGSIRDNDYRLTHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPDERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V+ I V++G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVEFIAVDQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWT+VEKHKK TSIIHGK HEET+AT+SFAG Y++V ++KEA+ V
Sbjct: 151 HIVDTTCPWVSKVWTTVEKHKKQTVTSIIHGKVKHEETLATSSFAGTYLVVLDLKEAQMV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG NG +E F+ KF A S+GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG---NGD---RETFMTKFAHACSQGFDPDRDLERLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPTALNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIG N I +K + +L+ + ++LP G + +GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIGADNSIEHKPLGQDLIREADFLPAGPVNVGITSGASTPDRV 384
Query: 349 VEDVLKKV 356
VE V++++
Sbjct: 385 VEHVIQRL 392
>gi|113477878|ref|YP_723939.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Trichodesmium
erythraeum IMS101]
gi|122964410|sp|Q10WA8.1|ISPH_TRIEI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110168926|gb|ABG53466.1| hydroxymethylbutenyl pyrophosphate reductase [Trichodesmium
erythraeum IMS101]
Length = 401
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/372 (55%), Positives = 277/372 (74%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M Y S++I++++EN + G V +KLA+++GFCWGVER+V +AYE R+ FP ++IWI
Sbjct: 31 MQSAYKSNLIQQIRENNYTLQRGEVTIKLAKTFGFCWGVERSVAMAYETRQHFPNQQIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
+ E+IHNP+VN+ +++M ++ IPV +G+K F V DVV+LPAFGA+V+EM L +KN
Sbjct: 91 SYELIHNPSVNQDMKDMEIKFIPVIDGQKDFSVAGNNDVVILPAFGASVQEMQILKDKNC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW S+EKHKK +TSIIHGKYSH ET+AT+SFA KY+IV NM +A+YV
Sbjct: 151 QIVDTTCPWVSKVWNSIEKHKKKKFTSIIHGKYSHAETIATSSFADKYLIVLNMTQAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
C+YIL G ++ FL KFK+A S+GFDPD+DL +VGIANQTTMLK ETEEIGKL
Sbjct: 211 CNYILNG------GNRDEFLAKFKQAYSEGFDPDLDLEQVGIANQTTMLKTETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+ + +N H+ +FNTICDATQERQDA+ + EK+DL++V+
Sbjct: 265 ERTMMKKYRPDQLNAHYQNFNTICDATQERQDAIAGLFNEKLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
E+A + GIPSY ID +RI NKI +K + E+ E WLP+G + +G+TSGASTPD+A
Sbjct: 325 EMAIENGIPSYHIDGAQRILSRNKIEHKPLGREVKISEGWLPEGPVVVGLTSGASTPDQA 384
Query: 349 VEDVLKKVFEIK 360
VED + K+ +K
Sbjct: 385 VEDTINKIVAMK 396
>gi|159902832|ref|YP_001550176.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9211]
gi|238687191|sp|A9BDN6.1|ISPH_PROM4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|159888008|gb|ABX08222.1| LytB-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 404
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/378 (53%), Positives = 281/378 (74%), Gaps = 19/378 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y S++I +++NG+ + G ++VKLAE++GFCWGVERAV +AYE R+ +P+E IWI
Sbjct: 31 LEKAYQSNLIGSIRDNGYLFEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPKESIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V+EM L+ +
Sbjct: 91 TNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPAFGATVQEMKLLHERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SFAG Y++V +++EA+YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHEFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG +E FL++F KA S+GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ANYILG------KGDREEFLKRFSKASSQGFDPDRDLQRLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM+RK+G + EHF++FNTICDAT+ERQDAM+ +V+E +DL++V+
Sbjct: 265 EKTMLRKYGPAELTEHFLAFNTICDATEERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ +RIG N I +K + +L+ ++N+LP+G I++GITSGASTPD+
Sbjct: 325 EIAISRGIRSFHIDTPERIGDQENTITHKPLGDDLITEKNFLPEGNISVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEIKREEAL 365
VE V+ K+ + E+A
Sbjct: 385 VVEHVIHKLINLSEEKAF 402
>gi|123967823|ref|YP_001008681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. AS9601]
gi|166217477|sp|A2BP63.1|ISPH_PROMS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123197933|gb|ABM69574.1| LytB [Prochlorococcus marinus str. AS9601]
Length = 398
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 275/372 (73%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWI
Sbjct: 31 LEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SFAGKY++V +++EA YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG + F+ KF KA S GFDPD DL +VG+ANQTTMLK ETEEIGK+
Sbjct: 211 SEYILG------KGNRNEFMNKFSKAFSNGFDPDKDLDRVGVANQTTMLKSETEEIGKVF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 ERTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA + I S+ ID+ +RI N I +K + EL K+N+LP G+I +GITSGASTPDK
Sbjct: 325 EIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKKNFLPSGKINVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEI 359
V DV++K+ +I
Sbjct: 385 VVADVIEKLIDI 396
>gi|126695625|ref|YP_001090511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9301]
gi|166217473|sp|A3PAY5.1|ISPH_PROM0 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|126542668|gb|ABO16910.1| LytB-like protein [Prochlorococcus marinus str. MIT 9301]
Length = 398
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 274/372 (73%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWI
Sbjct: 31 LEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SFAGKY++V +++EA YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG + F+ KF KA S GFDPD DL +VG+ANQTTMLK ETEEIGK+
Sbjct: 211 SEYILG------RGNRNEFMNKFAKACSNGFDPDKDLERVGVANQTTMLKSETEEIGKVF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 ERTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA + I S+ ID+ +RI N I +K + EL K N+LP G+I +GITSGASTPDK
Sbjct: 325 EIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKNNFLPSGKINVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEI 359
V DV++K+ +I
Sbjct: 385 VVADVIEKLIDI 396
>gi|78183857|ref|YP_376291.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9902]
gi|123582192|sp|Q3B080.1|ISPH_SYNS9 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78168151|gb|ABB25248.1| LytB protein [Synechococcus sp. CC9902]
Length = 399
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/373 (54%), Positives = 273/373 (73%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG++ T G + V LAE++GFCWGVERAV +AYE R+ +P E++WI
Sbjct: 31 LEQAYQSGLIGTIRDNGYKLTHGRLNVHLAEAFGFCWGVERAVAMAYETRRHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V IPVEEG K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVLFIPVEEGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEET+AT+SFAG Y++V +++EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQIV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +EAF+++F KA S+GFDPD DL ++G+ANQTTMLK ETEEIG++
Sbjct: 211 VDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVANQTTMLKSETEEIGRMF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G ++NEHF+++NTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPADLNEHFLAYNTICDATQERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ RI N I +K + +L + +LP G +T+GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPDRIDETTNSIEHKPLSEDLKRDQVFLPAGPVTVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEIK 360
AVE V++K+ +
Sbjct: 385 AVEAVIEKLMRLS 397
>gi|449016877|dbj|BAM80279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanidioschyzon
merolae strain 10D]
Length = 463
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/381 (54%), Positives = 278/381 (72%), Gaps = 28/381 (7%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M E++S+++K L+E+ + + V LA++YGFCWGVERAV +A+EAR+QF +++IWI
Sbjct: 79 MVGEFSSELLKALRESAYTLERDGLTVLLAKAYGFCWGVERAVALAFEARRQFADKRIWI 138
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV---EEGKKQFDV--VNKGDVVVLPAFGAAVEEMVTL 115
TNEIIHNP VN RL+EM + +P E G + D+ + DVV+LPAFGA ++EM L
Sbjct: 139 TNEIIHNPKVNTRLKEMGIFFVPEHVDERGMRHKDLSGIEPSDVVILPAFGATLDEMTYL 198
Query: 116 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 175
+ QIVDTTCPWVSKVW +++KH++ TSIIHGK++HEET+ATASFA Y+IVK+++
Sbjct: 199 DRLGCQIVDTTCPWVSKVWNALDKHQRARCTSIIHGKWNHEETIATASFAETYLIVKDLE 258
Query: 176 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 235
EAEYVC+YIL G KEAFL +F+ A+S GFDP+ DL VGIANQTTM+K ET
Sbjct: 259 EAEYVCNYILHG------GDKEAFLNRFQNAMSAGFDPERDLNAVGIANQTTMMKNETAA 312
Query: 236 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILV-------- 287
IGKL EKTMMRKFG +++HF++FNTICDATQERQDAM ++VE+ +DLILV
Sbjct: 313 IGKLFEKTMMRKFGPTELSKHFVAFNTICDATQERQDAMLELVEQDLDLILVVGGFNSSN 372
Query: 288 ----VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK-----GQITIGI 338
VEIA RGIP Y +D+ +RIGPGN+I Y+ +HG++ E WLPK G + +G+
Sbjct: 373 TSHLVEIAHQRGIPVYHVDTAERIGPGNRIEYRDVHGQIQRAEYWLPKTGKHGGHVRLGV 432
Query: 339 TSGASTPDKAVEDVLKKVFEI 359
TSGASTPD+ VE+ L ++F I
Sbjct: 433 TSGASTPDRYVEECLDRIFLI 453
>gi|91070606|gb|ABE11505.1| LytB protein-like [uncultured Prochlorococcus marinus clone
HOT0M-8G12]
Length = 398
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 273/372 (73%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I +++NGF +T G + VKLA+++GFCWGVERAV +AYE R+ +P E IWI
Sbjct: 31 LEEAYQSDLISSIRDNGFNFTKGRLNVKLAQAFGFCWGVERAVAMAYETRRHYPNENIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SFAGKY++V +++EA YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG + F+ KF KA S GFDPD DL +VG+ANQTTMLK ETEEIGK+
Sbjct: 211 SEYILG------KGNRNKFMNKFAKACSDGFDPDKDLDRVGVANQTTMLKSETEEIGKVF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 EKTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA + I S+ ID+ +RI N I +K + +L K N+LP G+I +GITSGASTPDK
Sbjct: 325 EIAITKNITSFHIDTPERISVEDNSILHKPLGSDLELKNNFLPSGKINVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEI 359
V DV++K+ I
Sbjct: 385 VVADVIEKLINI 396
>gi|116071531|ref|ZP_01468799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. BL107]
gi|116065154|gb|EAU70912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. BL107]
Length = 399
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 273/372 (73%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG++ T G + V LAE++GFCWGVERAV +AYE R+ +P E++WI
Sbjct: 31 LEQAYQSGLIGTIRDNGYKLTHGRLNVHLAEAFGFCWGVERAVAMAYETRRHYPSERLWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V IPVE+G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVLFIPVEKGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEET+AT+SFAG Y++V +++EA+ V
Sbjct: 151 HIVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQIV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +EAF+++F KA S+GFDPD DL ++G+ANQTTMLK ETEEIG++
Sbjct: 211 VDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVANQTTMLKSETEEIGRMF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G ++NEHF+++NTICDATQERQDAM+ +V+E +DL++V+
Sbjct: 265 ERTMLSKYGPTDLNEHFLAYNTICDATQERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA RGI S+ ID+ RI N I +K + +L + +LP G +T+GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPDRIDETINSIEHKPLSEDLKRDQVFLPAGPVTVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEI 359
AVE V++K+ +
Sbjct: 385 AVEAVIEKLMRL 396
>gi|302831463|ref|XP_002947297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast
precursor [Volvox carteri f. nagariensis]
gi|300267704|gb|EFJ51887.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast
precursor [Volvox carteri f. nagariensis]
Length = 472
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 274/369 (74%), Gaps = 21/369 (5%)
Query: 6 TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEII 65
T+ ++ +++ +G + G V VKLA++YG+CWGVERAV++AYEAR+ P++K+++TNEII
Sbjct: 88 TNGLVAQMRNDGNIWKQGTVTVKLAKAYGYCWGVERAVRMAYEARQAHPDKKLFVTNEII 147
Query: 66 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDT 125
HNP VNKRL+EM ++ I E K + + GDVV+ PAFGA V+E+ +K VQ+VDT
Sbjct: 148 HNPEVNKRLKEMNIEIIEDEGDGKDYSQIGNGDVVIFPAFGATVKELSDFRDKGVQMVDT 207
Query: 126 TCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYIL 185
TCPWV+KVW SV+ H + YTS+IHGKYSHEET+ATASFA Y+IVK++KEA+YVCDYIL
Sbjct: 208 TCPWVAKVWNSVDTHTRKQYTSVIHGKYSHEETIATASFASNYVIVKDLKEAQYVCDYIL 267
Query: 186 GGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMM 245
G KE FL KF KAVSKGFDPD L +VG+ANQTTMLKGETE+IGK++E TMM
Sbjct: 268 HG------GNKEEFLAKFSKAVSKGFDPDTMLDRVGLANQTTMLKGETEQIGKMLEATMM 321
Query: 246 RKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVDLILVV------------EIAE 292
+K+G +N HF+ TICDATQERQDA+Y MV + +VD ++VV EIAE
Sbjct: 322 QKYGPAELNNHFLLMETICDATQERQDALYDMVADPEVDFLIVVGGFNSSNTSHLQEIAE 381
Query: 293 DRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQ-ITIGITSGASTPDKAVE 350
+G+PS+W+DS RI N + +KL HGEL E WL G+ +TIGITSGASTPD+AVE
Sbjct: 382 HKGLPSFWVDSAARIDVEKNTVLHKLAHGELRETVGWLTPGKPVTIGITSGASTPDRAVE 441
Query: 351 DVLKKVFEI 359
+VL KVF+I
Sbjct: 442 EVLAKVFKI 450
>gi|33864121|ref|NP_895681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9313]
gi|50400960|sp|Q7V4T7.1|ISPH_PROMM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33635705|emb|CAE22029.1| LytB protein homolog [Prochlorococcus marinus str. MIT 9313]
Length = 398
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/371 (53%), Positives = 271/371 (73%), Gaps = 18/371 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L EM V I E G K F VN GDVV+LPAFGA V+EM L+ +
Sbjct: 91 TNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPAFGATVQEMELLHERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSFAGTYLVVLDLDEAQLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG + AF+++F KA S FDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG------QGDRAAFMKRFAKACSANFDPDQDLQRLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+RK+G +N+HF+SFNTICDAT+ERQ AM+ +V+E +DL++V+
Sbjct: 265 ERTMLRKYGPIELNKHFLSFNTICDATEERQQAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIG N I +K + +L + N+LP G +++GITSGASTPD+
Sbjct: 325 EIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAGSVSVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEI 359
VE V++K+ ++
Sbjct: 385 VEHVIQKLIDL 395
>gi|254525505|ref|ZP_05137557.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9202]
gi|221536929|gb|EEE39382.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9202]
Length = 398
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 269/372 (72%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I ++EN F + G +K+KLA+S+GFCWGVERAV +AYE R+ +P+E IW+
Sbjct: 31 LGESYQSDLIASIRENNFSFQKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPDETIWM 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNNHLSKMNVKIISAKNGVKDFSPVSLGDVVILPAFGATVQEMQLLHEKEC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SFAG Y++V ++ EA+YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSFAGNYLVVFDLAEAKYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYI G K+ F++KF KA S GFDPD+ L ++G+ANQTTMLK ETEEIGKL
Sbjct: 211 SDYIEG------KGDKKEFMKKFSKAFSNGFDPDIHLERIGVANQTTMLKSETEEIGKLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G N+N+HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 ENTMLRKYGPANINDHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA I S+ ID RI N I +K + ELV KEN+LP G I +GITSGASTPDK
Sbjct: 325 EIAITNKIESFHIDISDRISVENNSIFHKPLESELVLKENFLPDGDINVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEI 359
V DV++K+ +I
Sbjct: 385 VVADVIEKLIDI 396
>gi|299471160|emb|CBN79017.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast
precursor [Ectocarpus siliculosus]
Length = 454
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 278/378 (73%), Gaps = 19/378 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M+ E+TSDII + KEN T G+ KLAE YGFCWGVERAV +A++ARK FP++ + I
Sbjct: 80 MSDEFTSDIISEFKENKGSITRGDTTFKLAEYYGFCWGVERAVAMAFQARKHFPDKTMHI 139
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNE+IHNP VN++L+EM V +PV ++G K + ++ GDVV+LPAFGA++EEM TL+ KN
Sbjct: 140 TNELIHNPGVNEKLDEMGVNFVPVSDKGGKDLETIDDGDVVILPAFGASLEEMQTLDEKN 199
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
VQ+VDTTCPWVSKVW +V+KH K +TS+IHGK++HEETVATASF KY++VKNM EAEY
Sbjct: 200 VQVVDTTCPWVSKVWNTVDKHTKAQFTSVIHGKWAHEETVATASFCDKYLVVKNMAEAEY 259
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V YI G K F+EKFK A+S+GFDPDVDLVKVG+ANQTTM K ET +IGKL
Sbjct: 260 VAAYIANG-----GGDKAEFMEKFKNAMSEGFDPDVDLVKVGLANQTTMYKRETRDIGKL 314
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
EKT+M K+G V EH+++F+TICDATQERQDA+ ++VEE++DL+LVV
Sbjct: 315 FEKTLMEKYGPAEVGEHWMAFDTICDATQERQDAILELVEEEIDLMLVVGGWDSSNTQHL 374
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPKGQITIGITSGASTPD 346
EI+ ++GIP++W++ + P IA+ H E + EN+LP G+I IG+TSGASTPD
Sbjct: 375 AEISANKGIPTFWVNKANCVKPDGSIAHVDPHSMEELRTENFLPAGEIVIGVTSGASTPD 434
Query: 347 KAVEDVLKKVFEIKREEA 364
+E ++ + +K+ A
Sbjct: 435 AYMEQAVENISMLKKLAA 452
>gi|33860822|ref|NP_892383.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|50400958|sp|Q7V329.1|ISPH_PROMP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33633764|emb|CAE18723.1| LytB protein homolog [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 398
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/374 (54%), Positives = 272/374 (72%), Gaps = 19/374 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I ++ N F Y G + +KLA+++GFCWGVERAV +AYE R+ +P+E IWI
Sbjct: 31 LEEAYQSDLITSIRNNSFTYKKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPDENIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPAFGATVQEMKLLHEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SFA KY++V N++EA YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKFKHEETLATSSFADKYLVVLNLEEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG K FL KF +A S GFDPD DL +VG+ANQTTMLK ETEEIGK+
Sbjct: 211 SEYILG------RGNKNHFLNKFAQAFSNGFDPDKDLDRVGVANQTTMLKSETEEIGKVF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM+ KFG E +N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 EKTMLHKFGPEKLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA ++ I S+ ID+ +RI N I +K + E+V K+N++P G+I +GITSGASTPDK
Sbjct: 325 EIAINKNISSFHIDTPERISVKENSILHKPLKSEMVLKKNFIPDGEIKVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEIKR 361
V DV++K+ I +
Sbjct: 385 IVADVIEKLIAITK 398
>gi|33239748|ref|NP_874690.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|50400964|sp|Q7VDS2.1|ISPH_PROMA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33237273|gb|AAP99342.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 405
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/372 (54%), Positives = 274/372 (73%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWI
Sbjct: 31 LEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V EM L+ +
Sbjct: 91 TNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATVHEMKLLHERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +++SIIHGK HEET+AT+SFAG Y++V ++KEA+YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHEFSSIIHGKVKHEETLATSSFAGTYLVVLDLKEAQYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG ++ FL +F +A S+GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 SDYILG------KGNRDDFLRRFSRASSQGFDPDRDLKRLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM+RK+G +NEHF++FNTICDAT+ERQDAM+ +V+E +DL++V+
Sbjct: 265 EKTMLRKYGPAELNEHFLAFNTICDATEERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +GI S+ ID+ +RIG N I +K + +L + N+LP+G+I +GITSGASTPD+
Sbjct: 325 EIALAKGIRSFHIDTPERIGEIENTITHKPLGDDLRVESNFLPEGKINVGITSGASTPDR 384
Query: 348 AVEDVLKKVFEI 359
VE V++K+ +
Sbjct: 385 IVEHVIQKLINL 396
>gi|78778651|ref|YP_396763.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9312]
gi|123554687|sp|Q31CR8.1|ISPH_PROM9 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78712150|gb|ABB49327.1| hydroxymethylbutenyl pyrophosphate reductase [Prochlorococcus
marinus str. MIT 9312]
Length = 398
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/369 (55%), Positives = 270/369 (73%), Gaps = 19/369 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I +++NGF Y G + +KLA+++GFCWGVERAV +AYE R+ +P E IWI
Sbjct: 31 LEEAYQSDLISSIRDNGFTYNKGRLNIKLAKAFGFCWGVERAVAMAYETRRHYPNENIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SFAGKY++V +++EA Y+
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYI 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG + F+ KF KA S GFDPD DL +VG+ANQTTMLK ETEEIGK+
Sbjct: 211 SEYILG------RGNRNEFMNKFAKACSDGFDPDKDLDRVGVANQTTMLKSETEEIGKVF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 265 EKTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA + I S+ ID+ +RI N I +K + +L K N+LP G I +GITSGASTPDK
Sbjct: 325 EIAITKNITSFHIDTPERISVEENSILHKPLGLDLELKNNFLPSGNINVGITSGASTPDK 384
Query: 348 AVEDVLKKV 356
V DV++K+
Sbjct: 385 VVADVIEKL 393
>gi|157412625|ref|YP_001483491.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9215]
gi|157387200|gb|ABV49905.1| hydroxymethylbutenyl pyrophosphate reductase [Prochlorococcus
marinus str. MIT 9215]
Length = 417
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 268/372 (72%), Gaps = 19/372 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I ++EN F + G +K+KLA+S+GFCWGVERAV +AYE R+ +P E IW+
Sbjct: 50 LGESYQSDLIASIRENNFSFQKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPNETIWM 109
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V+ I + G K F V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 110 TNEIIHNPSVNNHLSKMNVKIISAKNGVKDFSPVSLGDVVILPAFGATVQEMQLLHEKEC 169
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SFAG Y++V ++ EA+YV
Sbjct: 170 HIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSFAGNYLVVFDLAEAKYV 229
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYI G K+ F++KF KA S GFDPD+ L ++G+ANQTTMLK ETEEIGKL
Sbjct: 230 SDYIEG------KGDKKEFMKKFSKAFSNGFDPDIHLERIGVANQTTMLKSETEEIGKLF 283
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E TM+RK+G N+N+HF++FNTICDAT+ERQDAM+ +V+E +D+++V+
Sbjct: 284 ENTMLRKYGPANINDHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQ 343
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA I S+ ID RI N I +K + ELV KEN+LP G I +GITSGASTPDK
Sbjct: 344 EIAITNKIESFHIDISDRISVEDNSIFHKPLESELVLKENFLPDGDINVGITSGASTPDK 403
Query: 348 AVEDVLKKVFEI 359
V DV++K+ +I
Sbjct: 404 VVADVIEKLIDI 415
>gi|209402479|gb|ACI45962.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Pyropia yezoensis]
Length = 386
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/377 (54%), Positives = 266/377 (70%), Gaps = 19/377 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M E+TSD+I +L+ + G V VKLA++YGFCWGVERAV +AYE R+QFP E+IWI
Sbjct: 8 MTTEFTSDLIAELRAAAYTVVRGGVTVKLAKAYGFCWGVERAVAMAYETRRQFPGERIWI 67
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN RL EM V +P E K V GDVV+LPAFGA +EEM L
Sbjct: 68 TNEIIHNPSVNTRLREMGVLFVPQEGMVKDLSGVAAGDVVILPAFGATLEEMQFLTETGC 127
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QIVDTTCPWVSKVW +++KHK+ TS+IHGK++HEET+ATASFA KY++V NM EA+YV
Sbjct: 128 QIVDTTCPWVSKVWGTLDKHKRVACTSVIHGKWAHEETIATASFADKYLVVANMAEAQYV 187
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILGG ++ FL KF A+S GFDPD DL VG+ANQTTMLK ET IGKL
Sbjct: 188 ADYILGG------GDRDEFLAKFSNAMSAGFDPDTDLSAVGVANQTTMLKSETAAIGKLF 241
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE-KVDLILVV----------- 288
EKTM+ ++G ++ F++++TICDATQERQDAM ++++ VDL++V+
Sbjct: 242 EKTMLVRYGPSDLTTRFVAYDTICDATQERQDAMIELLDAGDVDLVVVIGGFNSSNTSHL 301
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
E+AE G+ SYW+DS + + P N+I Y+ G+ + +LP G +TIG+TSGASTPDK
Sbjct: 302 QEMAEHAGVTSYWVDSAECVAPENRIRYRSSDGQEHVVDGFLPTGPVTIGVTSGASTPDK 361
Query: 348 AVEDVLKKVFEIKREEA 364
VEDVL+++F I + A
Sbjct: 362 VVEDVLERLFMIHKLSA 378
>gi|72383466|ref|YP_292821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. NATL2A]
gi|124025055|ref|YP_001014171.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. NATL1A]
gi|123620427|sp|Q46HB0.1|ISPH_PROMT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166217474|sp|A2C096.1|ISPH_PROM1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|72003316|gb|AAZ59118.1| LytB protein [Prochlorococcus marinus str. NATL2A]
gi|123960123|gb|ABM74906.1| LytB [Prochlorococcus marinus str. NATL1A]
Length = 401
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/373 (56%), Positives = 273/373 (73%), Gaps = 20/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWI
Sbjct: 31 LAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L +M V I E+G K F VV GDVV+LPAFGA V++M L+++
Sbjct: 91 TNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFGATVQDMKLLHDRGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT+SFAG Y+++ +++EA YV
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATSSFAGTYLVLFDLEEANYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG +E FL++F KA S GFDPD DL KVG+ANQTTMLK ETEEIG+L
Sbjct: 211 SDYILG------KGNREDFLKRFSKASSAGFDPDKDLQKVGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM+++FG +NEHF++ NTICDAT+ERQ AM+ +V+E +DL++V+
Sbjct: 265 EKTMLQRFGPAQLNEHFLAINTICDATEERQGAMFSLVDEPLDLMVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAY-KLMHGELVEKENWLPKGQITIGITSGASTPD 346
EIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L G I++GITSGASTPD
Sbjct: 325 EIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQNGNISVGITSGASTPD 384
Query: 347 KAVEDVLKKVFEI 359
+ VEDV+ K+ +I
Sbjct: 385 RVVEDVIHKLMKI 397
>gi|124024171|ref|YP_001018478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9303]
gi|166217475|sp|A2CCK3.1|ISPH_PROM3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123964457|gb|ABM79213.1| LytB [Prochlorococcus marinus str. MIT 9303]
Length = 398
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/371 (53%), Positives = 270/371 (72%), Gaps = 18/371 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWI
Sbjct: 31 LEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+ L EM V I E G K F V+ GDVV+LPAFGA V+EM L+ +
Sbjct: 91 TNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPAFGATVQEMELLHERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SFAG Y++V ++ EA+ V
Sbjct: 151 HIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSFAGTYLVVLDLDEAQLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
DYILG + AF+++F KA S FDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 ADYILG------QGDRAAFMKRFAKACSANFDPDQDLQRLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+RK+G +N+HF+SFNTICDAT+ERQ AM+ +V+E +DL++V+
Sbjct: 265 ERTMLRKYGPIELNKHFLSFNTICDATEERQQAMFSLVDEPLDLLVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RIG N I +K + +L + N+LP G + +GITSGASTPD+
Sbjct: 325 EIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAGSVNVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEI 359
VE V++K+ ++
Sbjct: 385 VEHVIQKLIDL 395
>gi|352095111|ref|ZP_08956214.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8016]
gi|351679122|gb|EHA62264.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8016]
Length = 398
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/372 (55%), Positives = 274/372 (73%), Gaps = 18/372 (4%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S +I +++NG+ T G ++V+LAE++GFCWGVERAV +AYE R+ +P+E+IWI
Sbjct: 31 LEQAYQSSLIGSIRDNGYRLTHGRLQVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWI 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L EM V I VE G K F V GDVV+LPAFGA V+EM LN +
Sbjct: 91 TNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVASGDVVILPAFGATVQEMQLLNERGC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SFAG Y++V +++EA V
Sbjct: 151 HIVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEARLV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YILG NG +EAF+++F A S GFDPD DL ++G+ANQTTMLK ETEEIG+L
Sbjct: 211 AEYILG---NGD---REAFMKRFSNASSPGFDPDRDLERLGVANQTTMLKSETEEIGRLF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E VDL++V+
Sbjct: 265 ERTMLSKYGPTELNEHFLAFNTICDATQERQDAMFSLVDETVDLMVVIGGYNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIA RGI S+ ID+ +RI N I +K + EL +E +LP+G +T+GITSGASTPD+
Sbjct: 325 EIAVSRGIRSFHIDTPERIHSDNSIEHKPLGEELTLEELFLPEGPVTVGITSGASTPDRV 384
Query: 349 VEDVLKKVFEIK 360
VE V++++ +
Sbjct: 385 VEHVIQRLIALS 396
>gi|123965532|ref|YP_001010613.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9515]
gi|166217476|sp|A2BUP5.1|ISPH_PROM5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123199898|gb|ABM71506.1| LytB [Prochlorococcus marinus str. MIT 9515]
Length = 398
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/374 (54%), Positives = 265/374 (70%), Gaps = 19/374 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ + Y SD+I ++EN F + G +K+KLA+S+GFCWGVERAV +AYE R+ +P E IW+
Sbjct: 31 LGESYQSDLIASIRENNFSFEKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPNEDIWM 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN L M V+ I + G K F V+ GDVV+LPAFGA V+EM L+ K
Sbjct: 91 TNEIIHNPSVNNHLSRMNVKIISAKNGIKDFSSVSTGDVVILPAFGATVQEMQLLHEKKC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
QI+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SFAG Y++V ++ EAEYV
Sbjct: 151 QIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSFAGNYLVVFDLDEAEYV 210
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YI G K F+ KF KA S GFDPDV L ++G+ANQTTMLK ETEEIGK
Sbjct: 211 SNYIQG------HGDKNKFMNKFAKACSDGFDPDVHLERIGVANQTTMLKSETEEIGKFF 264
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
EKTM+ K+G N+N+HF++FNTICDAT+ERQDAM+ +V E +D+++V+
Sbjct: 265 EKTMLMKYGPANINDHFLAFNTICDATEERQDAMFSLVNEDLDILVVIGGFNSSNTTHLQ 324
Query: 289 EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA I S+ ID RI N I +K + EL+ K+N++P G+I +GITSGASTPDK
Sbjct: 325 EIAISNNIESFHIDISDRISVENNSICHKPLESELILKKNFIPDGKIKVGITSGASTPDK 384
Query: 348 AVEDVLKKVFEIKR 361
V DV++K+ I +
Sbjct: 385 IVADVIEKLIAITQ 398
>gi|223045771|gb|ACM79143.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dunaliella
salina]
Length = 474
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/368 (55%), Positives = 274/368 (74%), Gaps = 23/368 (6%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++ +++E G + G+V VKLA++YG+CWGVERAV++AYEAR+ FP I +TNEIIHNP
Sbjct: 94 LVAQMREEGNFWKQGDVTVKLAKAYGYCWGVERAVRMAYEARRAFPGRSIHVTNEIIHNP 153
Query: 69 TVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTT 126
VN+RL EM V NI E+ +K + ++ GDVV+ PAFG +M +K V IVDTT
Sbjct: 154 EVNRRLREMDV-NIVKEDPQKGKDYSKIDNGDVVIFPAFGVGAPDMKYFRDKGVNIVDTT 212
Query: 127 CPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG 186
CPWV+KVW SV+ + K TSIIHGKYSHEETVATASFA Y+I+K++ EA+YVCDYIL
Sbjct: 213 CPWVAKVWNSVDTYAKKKCTSIIHGKYSHEETVATASFAEDYLIIKDLNEAQYVCDYILK 272
Query: 187 GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 246
G +E F++KF KAVSKGFDPDV L +VG+ANQTTMLKGET+ IGK++E+TMM
Sbjct: 273 G------GDREEFMKKFSKAVSKGFDPDVHLNRVGLANQTTMLKGETQAIGKMLERTMME 326
Query: 247 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEK-VDLILVV------------EIAED 293
KFG +N+ +HF+ +TICDATQERQDA+Y++ ++ +D++LVV EI +
Sbjct: 327 KFGPQNLQDHFMVMDTICDATQERQDALYEITDDPTIDMMLVVGGFNSSNTSHLQEIPHN 386
Query: 294 RGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
+G+P++W+D+ RI N IA+KL +GEL ENWLP+G ITIG+TSGASTPD+AVE+V
Sbjct: 387 KGLPAFWVDTADRIDMASNSIAHKLHYGELKVTENWLPEGPITIGVTSGASTPDRAVEEV 446
Query: 353 LKKVFEIK 360
L++VF +K
Sbjct: 447 LERVFRMK 454
>gi|389650110|gb|AFK94154.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dunaliella
salina]
Length = 474
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/368 (55%), Positives = 274/368 (74%), Gaps = 23/368 (6%)
Query: 9 IIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
++ +++E G + G+V VKLA++YG+CWGVERAV++AYEAR+ FP I +TNEIIHNP
Sbjct: 94 LVAQMREEGNFWKQGDVTVKLAKAYGYCWGVERAVRMAYEARRAFPGRSIHVTNEIIHNP 153
Query: 69 TVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTT 126
VN+RL EM V NI E+ +K + ++ GDVV+ PAFG +M +K V IVDTT
Sbjct: 154 EVNRRLREMDV-NIVKEDPQKGKDYSKIDNGDVVIFPAFGVGAPDMKYFRDKGVNIVDTT 212
Query: 127 CPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG 186
CPWV+KVW SV+ + K TSIIHGKYSHEETVATASFA Y+I+K++ EA+YVCDYIL
Sbjct: 213 CPWVAKVWNSVDTYAKKKCTSIIHGKYSHEETVATASFAEDYLIIKDLNEAQYVCDYILK 272
Query: 187 GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 246
G +E F++KF KAVSKGFDPDV L +VG+ANQTTMLKGET+ IGK++E+TMM
Sbjct: 273 G------GDREEFMKKFSKAVSKGFDPDVHLNRVGLANQTTMLKGETQAIGKMLERTMME 326
Query: 247 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEK-VDLILVV------------EIAED 293
KFG +N+ +HF+ +TICDATQERQDA+Y++ ++ +D++LVV EI +
Sbjct: 327 KFGPQNLQDHFMVMDTICDATQERQDALYEITDDPTIDMMLVVGGFNSSNTSHLQEIPHN 386
Query: 294 RGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
+G+P++W+D+ RI N IA+KL +GEL ENWLP+G ITIG+TSGASTPD+AVE+V
Sbjct: 387 KGLPAFWVDTADRIDMANNSIAHKLHYGELKVTENWLPEGPITIGVTSGASTPDRAVEEV 446
Query: 353 LKKVFEIK 360
L++VF +K
Sbjct: 447 LERVFRMK 454
>gi|159486551|ref|XP_001701302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chlamydomonas
reinhardtii]
gi|158271785|gb|EDO97597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chlamydomonas
reinhardtii]
Length = 465
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/369 (55%), Positives = 273/369 (73%), Gaps = 21/369 (5%)
Query: 6 TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEII 65
TS ++ +++ + G+V VKLA++YG+CWGVERAV++AYEAR P++K+++TNEII
Sbjct: 80 TSGLVAQMRTQNNLWKEGDVTVKLAKAYGYCWGVERAVRMAYEARLAHPDKKVFVTNEII 139
Query: 66 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDT 125
HNP VN RL+EM ++ + E K + ++ GDVV+ PAFGA V+E+ K VQ+VDT
Sbjct: 140 HNPEVNSRLKEMNIEIVEDEGKGKDYSMIGGGDVVIFPAFGATVQELTDFKEKGVQMVDT 199
Query: 126 TCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYIL 185
TCPWV+KVW SV+ H + YTS+IHGKYSHEET+ATASFA YIIVK++KEA+YVCDYIL
Sbjct: 200 TCPWVAKVWNSVDTHTRKQYTSVIHGKYSHEETIATASFASNYIIVKDLKEAQYVCDYIL 259
Query: 186 GGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMM 245
G +E FL+KF KAVS GFDP+ L +VG+ANQTTMLKGETE+IGK++EKTM+
Sbjct: 260 QG------GNREEFLQKFSKAVSAGFDPETMLDRVGLANQTTMLKGETEQIGKMLEKTML 313
Query: 246 RKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVDLILVV------------EIAE 292
K+G +N+HF+ TICDATQERQDA+Y+MV + ++D+++VV EIAE
Sbjct: 314 TKYGPAKLNDHFLLMETICDATQERQDALYEMVADPEIDMMIVVGGFNSSNTSHLQEIAE 373
Query: 293 DRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQ-ITIGITSGASTPDKAVE 350
+G+ S+W+DS RI N I +KL HGEL E WL G+ +TIGITSGASTPD+AVE
Sbjct: 374 HKGLASFWVDSAARIDVEKNVILHKLAHGELKETTGWLNPGKPVTIGITSGASTPDRAVE 433
Query: 351 DVLKKVFEI 359
+VL KVF+I
Sbjct: 434 EVLHKVFKI 442
>gi|37522868|ref|NP_926245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeobacter
violaceus PCC 7421]
gi|50400939|sp|Q7NG74.1|ISPH_GLOVI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|35213870|dbj|BAC91240.1| glr3299 [Gloeobacter violaceus PCC 7421]
Length = 417
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/377 (51%), Positives = 268/377 (71%), Gaps = 23/377 (6%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I +++ NG+ G V V+LAE++GFCWGV++AV +AYE + F ++WI
Sbjct: 21 LKAEYESSLIHEIRANGYTLRRGGVTVRLAEAFGFCWGVDKAVSMAYETHRMFAGRQLWI 80
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVVVLPAFGAAVEEMVTLN 116
TNEIIHNP VN+ L M ++ + +E K F+ V++ DVV+LPAFGA+ +EM L+
Sbjct: 81 TNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVVILPAFGASTQEMQILD 140
Query: 117 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 176
KN IVDTTCPWVS VW V K+ + ++TSIIHGKY HEETVATAS A +Y++V N++E
Sbjct: 141 EKNCVIVDTTCPWVSAVWNRVGKYDRAEFTSIIHGKYQHEETVATASRARRYLVVLNLEE 200
Query: 177 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
A+ VCDYIL G + AFL F A +GFDPD DLV+VGIANQTTMLKGETE I
Sbjct: 201 AQQVCDYILHG------GDRRAFLAHFGMAACEGFDPDRDLVRVGIANQTTMLKGETERI 254
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
GKL E+TMMR++G N+ +HF+S +TICDATQERQDAM+K+VEE +DL++V+
Sbjct: 255 GKLFERTMMRRYGPANLADHFMSHDTICDATQERQDAMFKLVEEPLDLLVVIGGYNSSNT 314
Query: 289 ----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE-LVEKENWLPKGQITIGITSGAS 343
EIA +RG+PS+ ID R+ I ++ +H + LV +NWLP G++T+G+T+GAS
Sbjct: 315 THLQEIAVERGLPSFHIDGADRLVSAQFIEHRDLHSKSLVRTKNWLPAGEVTVGVTAGAS 374
Query: 344 TPDKAVEDVLKKVFEIK 360
TPD+ V +V+ ++FE+K
Sbjct: 375 TPDRVVAEVIARIFELK 391
>gi|86610071|ref|YP_478833.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86558613|gb|ABD03570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 419
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/375 (49%), Positives = 267/375 (71%), Gaps = 19/375 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Y S ++++++ + Y G++ + LA ++GFCWGVERAV+ AYEAR++FP+ ++WI
Sbjct: 45 LQTTYKSPLVEQIRAQSYRYQRGDITIHLARAFGFCWGVERAVEYAYEARRRFPDRQLWI 104
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP VN+ L+EM ++ + +GKK F + DVV+ PAFGA+ EM ++
Sbjct: 105 TNEIIHNPLVNQHLKEMGIRFVEKGPDGKKDFSQIRPQDVVIWPAFGASASEMAFFRSQG 164
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
+IVDTTCPWVS+VW V+KH+ +TS+IHGKY+HEETVAT+SFA KY++V N++EAE+
Sbjct: 165 NEIVDTTCPWVSRVWNQVDKHRAAQFTSVIHGKYNHEETVATSSFAEKYLVVLNLEEAEW 224
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V YIL G G ++ F +F KA S GFDPD DL ++GIANQTTML+GET I KL
Sbjct: 225 VARYILQG---GDAA---EFRRRFGKATSPGFDPDRDLERIGIANQTTMLEGETRAIAKL 278
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
E TM+RK+G + ++ HF+SFNTIC+ATQERQDAM++++E+ +D+++V+
Sbjct: 279 FETTMLRKYGPQELDNHFMSFNTICNATQERQDAMFELLEQPLDVVVVIGGFNSSNTTHL 338
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +G+PS+ ID I P N+I +K +H + E WLP G + IGITSGASTPD+
Sbjct: 339 QEIALAKGLPSFHIDGPDCIQPNNRIRHKPLHQDPTVTEGWLPDGPVQIGITSGASTPDR 398
Query: 348 AVEDVLKKVFEIKRE 362
VE+V++++F ++ E
Sbjct: 399 VVEEVIQRIFALREE 413
>gi|86605836|ref|YP_474599.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-3-3Ab]
gi|86554378|gb|ABC99336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-3-3Ab]
Length = 426
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/375 (49%), Positives = 269/375 (71%), Gaps = 19/375 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Y S ++++++ + Y G++ + LA+++GFCWGVERAV+ AYEAR++FP+ +IWI
Sbjct: 45 LQTTYKSPLVEQIRAQSYCYRQGDITIHLAKAFGFCWGVERAVEYAYEARRRFPDRQIWI 104
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNEIIHNP VN+ L+EM ++ + +GKK F + DVV+ PAFGA+V EM ++
Sbjct: 105 TNEIIHNPLVNRHLQEMGIRFVEKGPDGKKDFSQIRPEDVVIWPAFGASVSEMEFFRSQG 164
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
+IVDTTCPWVS+VW V+KH+ +TS+IHGKY+HEETVAT+SFA KY++V N++EAE+
Sbjct: 165 NEIVDTTCPWVSRVWNQVDKHRAAQFTSVIHGKYNHEETVATSSFAQKYLVVLNLEEAEW 224
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V YIL G G ++ F +F KA S GFDPD DL ++GIANQTTML+GET I KL
Sbjct: 225 VARYILHG---GDAA---EFRRRFGKATSPGFDPDRDLERIGIANQTTMLEGETRAIAKL 278
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
E TM+RK+G + +++HF+SFNTIC+ATQERQDAM++++E +D+++V+
Sbjct: 279 FETTMLRKYGPQELDKHFMSFNTICNATQERQDAMFELLERPLDVVVVIGGFNSSNTTHL 338
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EIA +G+PSY ID I P N+I +K +H + + E WLP G + IGITSGASTPD+
Sbjct: 339 QEIALAKGLPSYHIDGPDCIQPPNRIRHKPLHQDPIVTEGWLPDGPVQIGITSGASTPDR 398
Query: 348 AVEDVLKKVFEIKRE 362
VE+V+ ++F ++ +
Sbjct: 399 VVEEVILRIFALREQ 413
>gi|126742448|gb|ABO27197.1| plastid 4-hydroxy-3-methylbut-2-enyl disphosphate reductase
[Mesostigma viride]
Length = 314
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/314 (62%), Positives = 245/314 (78%), Gaps = 14/314 (4%)
Query: 41 RAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDV 99
RAVQ+AYE RK FP +KIWITNEIIHNPTVN+ L +M + IPV ++G+K F VV +V
Sbjct: 1 RAVQMAYETRKHFPTQKIWITNEIIHNPTVNQTLRDMEIGFIPVRDDGEKDFSVVANDNV 60
Query: 100 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 159
VVLPAFGA+V+EM L+NK V IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY+HEETV
Sbjct: 61 VVLPAFGASVQEMQLLSNKGVNIVDTTCPWVSKVWNTVEKHKKTEYTSIIHGKYAHEETV 120
Query: 160 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 219
ATASFAG Y+I+K+MKEAEY CDY+LGG+LNG S +KE FL+KF KA+S+GFDPD L
Sbjct: 121 ATASFAGTYLIIKDMKEAEYACDYLLGGKLNGKSGSKEDFLKKFSKAISRGFDPDKHLDF 180
Query: 220 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 279
VG+ANQTTMLKG+TE IGKL E ++M KFG ++ EHF++FNTICDATQERQDAM+++VE
Sbjct: 181 VGMANQTTMLKGDTEMIGKLFETSLMSKFGPQSAAEHFMAFNTICDATQERQDAMFELVE 240
Query: 280 EKVDLILVV------------EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKE 326
+ +D++LVV EIAE+R S+W+DS RI N+I + L +GELV +
Sbjct: 241 KPLDMMLVVGGYNSSNTSHLQEIAEERKHNSFWVDSADRIDVDKNEIQHLLHYGELVTTK 300
Query: 327 NWLPKGQITIGITS 340
WL G I +G+TS
Sbjct: 301 GWLKPGPIRVGVTS 314
>gi|384248977|gb|EIE22460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coccomyxa
subellipsoidea C-169]
Length = 438
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 273/375 (72%), Gaps = 30/375 (8%)
Query: 6 TSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEII 65
++ ++ +++ NG + G VKLA++YG+CWGVERAVQ+AYEARKQ+P K+ +TNEII
Sbjct: 50 STGLVARMRANGNLWQEG---VKLAKAYGYCWGVERAVQMAYEARKQYPNSKLHVTNEII 106
Query: 66 HNPTVNKRLEEMAVQNIPVEEGK-KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
HNP VN+RL+EM V NI + GK K F + DVV+LPAFGA+ +EM L++K VQIVD
Sbjct: 107 HNPAVNQRLKEMEV-NIIEDVGKGKDFSGIKGEDVVILPAFGASWQEMKMLSDKGVQIVD 165
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYI 184
TTCPWV+KVW++V+ + +TSIIHGKYSHEET+ATASFA Y+IV+++ E +YV DYI
Sbjct: 166 TTCPWVAKVWSAVDNQARKQHTSIIHGKYSHEETIATASFATTYLIVRDIPETQYVVDYI 225
Query: 185 LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTM 244
L G +E FL KF A+S+GFDPD DL+++G+ANQTTML+ ET IGK++EKTM
Sbjct: 226 LNG------GDREEFLAKFSNAMSEGFDPDRDLLRIGLANQTTMLRDETLTIGKMLEKTM 279
Query: 245 MRKFGVENVNEHFISFNTICDATQERQDAMYKMVE------EKVDLILVV---------- 288
M+K+G + +H++ +TICDATQERQDA+ ++V+ E+VD +LVV
Sbjct: 280 MQKYGPAELKDHYMVLDTICDATQERQDAVTELVQKQSDPAERVDFMLVVGGFNSSNTSH 339
Query: 289 --EIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
EI E G+PS+W++S + NKI +KL HGELVE + WL G IT+G+TSGASTP
Sbjct: 340 LQEIPEMAGVPSFWVNSAACVDVEHNKITHKLAHGELVETQPWLRDGPITVGVTSGASTP 399
Query: 346 DKAVEDVLKKVFEIK 360
D+AVE+VL K+F IK
Sbjct: 400 DRAVEEVLDKLFRIK 414
>gi|254416811|ref|ZP_05030560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176357|gb|EDX71372.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coleofasciculus
chthonoplastes PCC 7420]
Length = 393
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/372 (51%), Positives = 254/372 (68%), Gaps = 27/372 (7%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ EY S +I+++++N + GNV + LAE++GFCWGVERAV +AYE R+ FP E+IW+
Sbjct: 31 LQSEYQSSLIQEIRDNNYRLKRGNVTIHLAEAFGFCWGVERAVAMAYETRQHFPTERIWM 90
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP+VN+RL++M V +PVE+G K F VV GDVV+LPAFGA+V+EM LN+K
Sbjct: 91 TNEIIHNPSVNQRLQKMNVNFVPVEDGTKDFTVVGAGDVVILPAFGASVQEMQLLNDKKC 150
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKV AEY+
Sbjct: 151 KIVDTTCPWVSKVXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXAEYI 201
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G ++ F+ KF +A S+GFDPD DL +GIANQTTMLK ETE+IGKL
Sbjct: 202 ANYILNG------GNRDEFMAKFSRATSEGFDPDRDLEHIGIANQTTMLKSETEQIGKLF 255
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------ 288
E+TMM+K+G +N+HF SFNTICDATQERQDAM ++VEE++DL++V+
Sbjct: 256 ERTMMKKYGPVQLNQHFQSFNTICDATQERQDAMLELVEERLDLMVVIGGFNSSNTTQLQ 315
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
+IA +R IPSY IDS +RIGPGN+I +K++H ++ ENWLP+G+I +G+TSGASTPDK
Sbjct: 316 QIAIERKIPSYHIDSAERIGPGNRIDHKVLHQDMTVTENWLPEGEIVVGVTSGASTPDKV 375
Query: 349 VEDVLKKVFEIK 360
VED ++K+FE+K
Sbjct: 376 VEDAIEKIFELK 387
>gi|428178370|gb|EKX47246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia
theta CCMP2712]
Length = 435
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/373 (53%), Positives = 263/373 (70%), Gaps = 19/373 (5%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M +E+TSD++K+LKEN NV +KLAESYGFCWGVERAV +AYEAR + ++KI I
Sbjct: 60 MVEEFTSDMVKELKENNNVIERNNVVIKLAESYGFCWGVERAVAMAYEARSFYKDDKIHI 119
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
TNEIIHNP VN RL++M +PV G K F V +GDVVVLPAFGA++EEM L++K
Sbjct: 120 TNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPAFGASLEEMQLLDSKGC 179
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 180
+IVDTTCPWVSKVW +V+ H++ D TS+IHGK++HEE++ATAS A YII+K+M+EA+YV
Sbjct: 180 RIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMADTYIIIKDMEEAKYV 239
Query: 181 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 240
+YIL G KE F+ KFK A S GFDPD DL KVGIANQTTM K ET I KL
Sbjct: 240 TNYILNG------GNKEEFMAKFKNACSSGFDPDRDLKKVGIANQTTMYKEETAAIAKLF 293
Query: 241 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVDLILVV----------- 288
E+TM++KFG ENVN HF++ +TICDATQERQDA+ ++ ++ VD L+V
Sbjct: 294 ERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFYLIVGGWDSSNTGHL 353
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EI G Y ID RI I ++ G + +++LPKG++T+G+TSGASTPD+
Sbjct: 354 LEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPKGKVTVGVTSGASTPDR 413
Query: 348 AVEDVLKKVFEIK 360
+++ +++V +K
Sbjct: 414 YLQESVERVLMLK 426
>gi|224002076|ref|XP_002290710.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974132|gb|EED92462.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 462
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/384 (51%), Positives = 261/384 (67%), Gaps = 31/384 (8%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M ++ S ++ +LK N F VKV LA+ +GFCWGVER++ +AYEA + FP + + I
Sbjct: 81 MEDQFKSSLVDELKTNDFVIEKDGVKVYLAKDFGFCWGVERSIALAYEAVEHFPGKTVHI 140
Query: 61 TNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNE+IHNP VN +L +M VQ I + EGKK F + +GDVV+LPAFGA+ EEM +NNKN
Sbjct: 141 TNELIHNPEVNDKLHDMNVQFIEKLGEGKKDFSKIGEGDVVILPAFGASFEEMTLMNNKN 200
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
V++VDTTCPWVSKVW +V++H++ TS+IHGKY HEETVAT SF YI VK++KEAE
Sbjct: 201 VEVVDTTCPWVSKVWNTVDQHQRKGLTSVIHGKYGHEETVATVSFCEDYICVKDIKEAEM 260
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V DYI+ G KE FL+ F+KAVSKGFDPD L KVG+ANQTTM K ET IG+L
Sbjct: 261 VADYIING------GDKEKFLKYFEKAVSKGFDPDTMLDKVGLANQTTMYKKETRAIGQL 314
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK----VDLILVV------- 288
++K MM+KFG N +H++ F+TICDATQERQDA+ +VE +D ILVV
Sbjct: 315 MQKAMMKKFGPVNAKDHYLEFDTICDATQERQDAISDLVENSDELGLDFILVVGGWDSSN 374
Query: 289 -----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK------ENWLPKGQITIG 337
EI E G+ S+ I+ + IG N I ++ + GE+V + EN ++ +G
Sbjct: 375 TAHLLEIPEKAGVRSFHINKSECIGADNTITHRTVDGEIVTEKFIEDIEN--KDKKLVMG 432
Query: 338 ITSGASTPDKAVEDVLKKVFEIKR 361
+TSGASTPDKAV+D L ++F +K+
Sbjct: 433 VTSGASTPDKAVQDSLDQIFMLKK 456
>gi|171363683|dbj|BAG14390.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Perkinsus
marinus]
Length = 575
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/426 (47%), Positives = 273/426 (64%), Gaps = 74/426 (17%)
Query: 1 MNQEYTSDIIKKLKEN-GFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
+ + + S ++++++ + + T GN+ KLAE++GFCWGVERAV IAYE+ +++P++ IW
Sbjct: 149 LREVHNSTLVEEIQSSPDYTLTVGNITFKLAEAHGFCWGVERAVAIAYESSRRYPDKTIW 208
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEG-KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
+TNE+IHNPTVN+ LEE+ ++ IP + G +K F VV+ GDVV+LPAFGAAV+EM+ L K
Sbjct: 209 MTNEVIHNPTVNRNLEELGIRYIPRDAGNQKDFSVVSAGDVVILPAFGAAVKEMMELKRK 268
Query: 119 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 178
V IVDTTCPWVSKVW+SVE+HKKG+YTSIIHGK HEET+AT+SFA KY+I+KN+K+AE
Sbjct: 269 GVTIVDTTCPWVSKVWSSVERHKKGEYTSIIHGKSKHEETIATSSFADKYLILKNLKDAE 328
Query: 179 YVCDYILGGELNGSSSTKEA----FLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGET 233
YVC ++L S KE F EKF S GFDP DL KVG+ANQTTMLKGET
Sbjct: 329 YVCKFLL-------SKNKERLVDDFFEKFPADRHSVGFDPLKDLEKVGVANQTTMLKGET 381
Query: 234 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE------------- 280
I KL EKT+++ +G E +NEHF++FNTICDATQ+RQDA+YK+V E
Sbjct: 382 ALIAKLFEKTILQLYGPEGLNEHFVAFNTICDATQDRQDALYKLVGEKYEQPQSDMLEEL 441
Query: 281 -----------------KVDLILVV------------EIAEDRG----IPSYWIDSEKRI 307
K+D++LVV EI+ + G ++ ID RI
Sbjct: 442 GVDTPKTTDPQVTPTATKLDMMLVVGGFNSSNTEHLQEISVEAGGVKDHRAFHIDGPARI 501
Query: 308 GP-GNKIAYKLM----------HGELVEKENWLPKG--QITIGITSGASTPDKAVEDVLK 354
N I +K + HG L ++LP ITIG+TSGASTPD +E L+
Sbjct: 502 DELRNTITHKPVETPPIEAARNHG-LAVTHDFLPGDGEHITIGVTSGASTPDDVLEQSLQ 560
Query: 355 KVFEIK 360
K+ K
Sbjct: 561 KLLRTK 566
>gi|219115643|ref|XP_002178617.1| hydroxymethylbutenyl diphosphate reductase [Phaeodactylum
tricornutum CCAP 1055/1]
gi|209402471|gb|ACI45958.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Phaeodactylum tricornutum]
gi|217410352|gb|EEC50282.1| hydroxymethylbutenyl diphosphate reductase [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 458
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/379 (49%), Positives = 253/379 (66%), Gaps = 24/379 (6%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
M ++ S I+ L+ + F VKV LA+ +GFCWGVER++ +AYEA + FP+ K+ I
Sbjct: 79 MEDQFQSPIVNSLRTSNFVMDRDGVKVYLAKDFGFCWGVERSIALAYEAAEHFPDRKLHI 138
Query: 61 TNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
TNE+IHNP VN+ L+ VQ I + +G K F V GDVV+LPAFGA+ EEM + KN
Sbjct: 139 TNELIHNPEVNENLKAKNVQFIEKLGDGTKNFASVQDGDVVILPAFGASFEEMDYFDKKN 198
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 179
V+IVDTTCPWVSKVW +V+KH+K TS+IHGKY+HEETVAT SF +I VKN KEAE
Sbjct: 199 VEIVDTTCPWVSKVWNTVDKHQKQGLTSVIHGKYAHEETVATTSFCEDFICVKNFKEAEM 258
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
V +YIL G K+AF++ F+ AVS+GFDPD L KVG+ANQTTM K ET IG+L
Sbjct: 259 VANYILNG------GDKDAFMKHFENAVSEGFDPDKHLEKVGLANQTTMYKKETRAIGQL 312
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE----EKVDLILVV------- 288
+KTMM+KFG EH++ F+TICDATQERQDA++ MVE + +D ILV+
Sbjct: 313 FQKTMMKKFGPVKSKEHYMEFDTICDATQERQDAIHDMVESAQKDGLDFILVIGGWDSSN 372
Query: 289 -----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG-QITIGITSGA 342
EI GI ++ I+ + IG N I ++ + GE+V + ++ +G+TSGA
Sbjct: 373 TAHLLEIPVHAGIRAFHINRAECIGADNTITHRTVDGEIVTTQLLEDMDKEVVMGVTSGA 432
Query: 343 STPDKAVEDVLKKVFEIKR 361
STPD AV+D L ++F +K+
Sbjct: 433 STPDAAVQDSLSQIFLLKK 451
>gi|15281777|gb|AAK94426.1|AF398145_1 LYTB-like protein 1 [Brassica rapa subsp. pekinensis]
Length = 221
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/221 (81%), Positives = 198/221 (89%), Gaps = 12/221 (5%)
Query: 160 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 219
ATASFAGKYIIVKNMKEA YVCDYILGGEL+GSSSTKE F+EKFK AVSKGFDPD DL+K
Sbjct: 1 ATASFAGKYIIVKNMKEANYVCDYILGGELDGSSSTKEEFMEKFKYAVSKGFDPDSDLIK 60
Query: 220 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 279
VGIANQTTMLKGETEEIGKL+E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y++VE
Sbjct: 61 VGIANQTTMLKGETEEIGKLIERTMMRKYGVENVNGHFISFNTICDATQERQDAIYELVE 120
Query: 280 EKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
EK+DL+LVV EI+E RGIPSYWIDSE+RIGPGNKIAYKL +GELVEKEN
Sbjct: 121 EKIDLMLVVGGWNSSNTSHLQEISEVRGIPSYWIDSEQRIGPGNKIAYKLHYGELVEKEN 180
Query: 328 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
+LPKG ITIG+TSGASTPDK VEDVL KVF+IKREE LQLA
Sbjct: 181 FLPKGPITIGVTSGASTPDKVVEDVLVKVFDIKREELLQLA 221
>gi|15281779|gb|AAK94427.1|AF398146_1 LYTB-like protein 2 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 199/223 (89%), Gaps = 12/223 (5%)
Query: 156 EETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDV 215
E+T+ATASFAGKYIIVKNMKEA YVCDYILGGEL+GSSSTKE F+EKFK AVSKGFDPD
Sbjct: 1 EDTIATASFAGKYIIVKNMKEANYVCDYILGGELDGSSSTKEEFMEKFKYAVSKGFDPDS 60
Query: 216 DLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMY 275
DL+KVGIANQTTMLKGETEEIGKL+E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y
Sbjct: 61 DLIKVGIANQTTMLKGETEEIGKLIERTMMRKYGVENVNGHFISFNTICDATQERQDAIY 120
Query: 276 KMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
++VEEK+DL+LVV EI+E RGIPSYWIDSE+RIGPGNKIAYKL +GELV
Sbjct: 121 ELVEEKIDLMLVVGGWNSSNTSHLQEISEVRGIPSYWIDSEQRIGPGNKIAYKLHYGELV 180
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
EKEN+LPKG ITIG+TSGASTPDK VEDVL KVF+IKRE+ L
Sbjct: 181 EKENFLPKGPITIGVTSGASTPDKVVEDVLVKVFDIKREKLLH 223
>gi|50540736|gb|AAT77892.1| putative LytB protein [Oryza sativa Japonica Group]
gi|108710908|gb|ABF98703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative,
expressed [Oryza sativa Japonica Group]
gi|222632340|gb|EEE64472.1| hypothetical protein OsJ_19322 [Oryza sativa Japonica Group]
Length = 249
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 200/240 (83%), Gaps = 14/240 (5%)
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE 197
E+H KG+YT+IIHGKY+HEETVATASFA KYIIVK++ EA+YVCDYIL G+L+GSSSTKE
Sbjct: 3 ERHIKGNYTTIIHGKYAHEETVATASFADKYIIVKDITEAKYVCDYILEGQLDGSSSTKE 62
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE--NVNE 255
FL+KF+ AVS GFDPD+DL +VG+ NQTTMLKGET+EIG L+E+TMM K+G++ N E
Sbjct: 63 KFLKKFRYAVSPGFDPDIDLERVGVVNQTTMLKGETKEIGILIEQTMMSKYGLDQNNKQE 122
Query: 256 HFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
HF+ TIC+ATQERQDAMYK+VE++VDLILVV EI E GIPSYW+D
Sbjct: 123 HFVRVGTICNATQERQDAMYKLVEKEVDLILVVGGWNSSNTSHLQEIGELSGIPSYWVDG 182
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
E+RIGPGNKI+YK +GELVEK+ WLP G ITIG+TSGASTPDK VEDVL+KVFEIKR+E
Sbjct: 183 EQRIGPGNKISYKQKNGELVEKDKWLPHGAITIGVTSGASTPDKVVEDVLQKVFEIKRQE 242
>gi|57335867|emb|CAH25335.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia
theta]
Length = 330
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/330 (51%), Positives = 228/330 (69%), Gaps = 19/330 (5%)
Query: 47 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 106
YEAR + ++KI ITNEIIHNP VN RL++M +PV G K F V +GDVVVLPAFG
Sbjct: 1 YEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPAFG 60
Query: 107 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 166
A++EEM L++K +IVDTTCPWVSKVW +V+ H++ D TS+IHGK++HEE++ATAS A
Sbjct: 61 ASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMAD 120
Query: 167 KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQT 226
YII+K+M+EA+YV +YIL G KE F+ KFK A S GFDPD DL KVGIANQT
Sbjct: 121 TYIIIKDMEEAKYVTNYILNG------GNKEEFMAKFKNACSSGFDPDRDLKKVGIANQT 174
Query: 227 TMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVDLI 285
TM K ET I KL E+TM++KFG ENVN HF++ +TICDATQERQDA+ ++ ++ VD
Sbjct: 175 TMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFY 234
Query: 286 LVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 333
L+V EI G Y ID RI I ++ G + +++LPKG+
Sbjct: 235 LIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPKGK 294
Query: 334 ITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+T+G+TSGASTPD+ +++ +++V +K E
Sbjct: 295 VTVGVTSGASTPDRYLQESVERVLMLKALE 324
>gi|323452308|gb|EGB08182.1| hypothetical protein AURANDRAFT_26431 [Aureococcus anophagefferens]
Length = 400
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 254/382 (66%), Gaps = 27/382 (7%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGN----VKVKLAESYGFCWGVERAVQIAYEARKQFPEE 56
M E S+++ K++E+ +E T G V LA+ YG CWG ER+++IA A ++F ++
Sbjct: 1 MLSEMKSEMLDKMRESNYEVTRGEGNGAVTFTLAKEYGMCWGAERSIEIALAATEKFGDK 60
Query: 57 KIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 115
++ ITNE++HNP VNK LE+ V I +G K+FD V +GDVV+LPAFGA + EM
Sbjct: 61 QLHITNELLHNPGVNKMLEDEGVSFIEKTGDGGKRFDDVKEGDVVILPAFGATLAEMQHF 120
Query: 116 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 175
++ V VDTTCPWV+KVW V+K + T+IIHGKY+HEE +ATAS Y++VKN+
Sbjct: 121 SDMGVTTVDTTCPWVTKVWNVVDKQVQRSMTTIIHGKYAHEEAIATASMCDDYLMVKNID 180
Query: 176 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 235
EAEYVC+Y+ LN + +E L KF KA+SKGFDPDV L K+GIANQTTM K ET+
Sbjct: 181 EAEYVCNYM----LNPTPEGREDLLHKFAKAMSKGFDPDVHLEKIGIANQTTMYKKETQA 236
Query: 236 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK----VDLILV---- 287
+G+L E+ +++K+ E + F++F+TIC ATQERQDA+++MV+++ +D ILV
Sbjct: 237 VGRLFEQVILKKYPDEAAD-RFVAFDTICSATQERQDAIHEMVDDESVKDLDFILVVGGF 295
Query: 288 --------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ-ITIGI 338
VEI + GIP + I+ I N ++++L+ GE+ +ENWLP + IG+
Sbjct: 296 DSSNTAHLVEIPYEAGIPVFHINEADCISETNAVSHRLVSGEMAVEENWLPTDRPARIGV 355
Query: 339 TSGASTPDKAVEDVLKKVFEIK 360
TSGASTPD V++ L+++ +K
Sbjct: 356 TSGASTPDAYVQEALERLVLLK 377
>gi|62321441|dbj|BAD94833.1| hypothetical protein [Arabidopsis thaliana]
Length = 207
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 181/207 (87%), Gaps = 12/207 (5%)
Query: 174 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 233
MKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIANQTTMLKGET
Sbjct: 1 MKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGET 60
Query: 234 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----- 288
EEIG+L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL+LVV
Sbjct: 61 EEIGRLLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDLMLVVGGWNS 120
Query: 289 -------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 341
EI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSG
Sbjct: 121 SNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSG 180
Query: 342 ASTPDKAVEDVLKKVFEIKREEALQLA 368
ASTPDK VED L KVF+IKREE LQLA
Sbjct: 181 ASTPDKVVEDALVKVFDIKREELLQLA 207
>gi|261036397|gb|ACX54449.1| LYTB-like protein 1 [Epipremnum aureum]
Length = 204
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 162/204 (79%), Positives = 177/204 (86%), Gaps = 12/204 (5%)
Query: 177 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
A YVCDYILGGEL+GSSSTKE FLEKFK A+S GFDPD DLVKVGIANQTTMLKGETEEI
Sbjct: 1 AMYVCDYILGGELDGSSSTKEDFLEKFKYAISAGFDPDTDLVKVGIANQTTMLKGETEEI 60
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
GKLVEKTMM+K+G++NVN HF+SFNTICDATQERQDAMY +V+EK+DL+LVV
Sbjct: 61 GKLVEKTMMQKYGIQNVNNHFMSFNTICDATQERQDAMYNLVKEKIDLMLVVGGWNSSNT 120
Query: 289 ----EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 344
EIAE GIPSYWIDSE RIGPGN+I+YKL HGELVEKENWLP G ITIGITSGAST
Sbjct: 121 SHLQEIAEVNGIPSYWIDSEHRIGPGNRISYKLNHGELVEKENWLPPGPITIGITSGAST 180
Query: 345 PDKAVEDVLKKVFEIKREEALQLA 368
PDK VEDVL KVF++KREEALQLA
Sbjct: 181 PDKVVEDVLVKVFKLKREEALQLA 204
>gi|384917079|ref|ZP_10017212.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum fumariolicum SolV]
gi|384525529|emb|CCG93085.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum fumariolicum SolV]
Length = 411
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/378 (43%), Positives = 244/378 (64%), Gaps = 29/378 (7%)
Query: 4 EYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNE 63
Y S +++ L+ G + G + VKLA+++GFC+GVERA+ +AY K FP ++I++ E
Sbjct: 30 HYRSPLVEYLRTTGRYLSGGGITVKLAKAFGFCYGVERAIDLAYATTKVFPTKRIYLLGE 89
Query: 64 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 123
IIHNP VN +L M ++ + +G+ D + DVV++PAFGA VE M + QIV
Sbjct: 90 IIHNPEVNDQLTAMGIKRLQAVQGRYSLDGLTADDVVIIPAFGAEVETMKRIQQIGCQIV 149
Query: 124 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA------GKYIIVKNMKEA 177
DTTC V VW V +++ TSIIHGK HEET ATAS A G+Y++V N++E
Sbjct: 150 DTTCGDVMTVWKRVRQYRNEGATSIIHGKAWHEETKATASRAIGEDGNGQYLVVYNLEET 209
Query: 178 EYVCDYI-LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
+YVC+YI GG+ K+ FL+KFK AVS GFDPD+ L VG+ANQTTM++GETEE+
Sbjct: 210 DYVCNYIRYGGD-------KQEFLQKFKGAVSPGFDPDIHLRHVGVANQTTMMRGETEEV 262
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE-EKVDLILVV------- 288
+ + K + ++G EN+++HF F+TIC ATQERQDA+ M++ EK+DL++VV
Sbjct: 263 QRRICKAIEDRYGKENLHKHFRFFDTICGATQERQDALLDMLDREKLDLLIVVGGYNSSN 322
Query: 289 -----EIAEDRGIPSYWI-DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 342
EI E R +P+Y+I ++EK I + L G V E WL +G+I +GIT+GA
Sbjct: 323 TSHLAEIGEGR-LPTYFIKNAEKLISSQQIRHWNLHEGREVITEGWLGEGEINVGITAGA 381
Query: 343 STPDKAVEDVLKKVFEIK 360
S P+ +E+ ++++FE++
Sbjct: 382 SCPNNLIEETIQRLFELR 399
>gi|375152238|gb|AFA36577.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Lolium perenne]
Length = 201
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 172/201 (85%), Gaps = 12/201 (5%)
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VCDYILGG+L+GSSST+E FLEKFK A+S FDPD+DL KVGIANQTTMLKGETEEIGKL
Sbjct: 1 VCDYILGGQLDGSSSTREEFLEKFKNAISPEFDPDLDLEKVGIANQTTMLKGETEEIGKL 60
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
VEKTM+RKFGVEN N+HF++FNTICDATQERQDAMY++V++KVDLILVV
Sbjct: 61 VEKTMLRKFGVENANDHFVAFNTICDATQERQDAMYQLVKDKVDLILVVGGWNSSNTSHL 120
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 347
EI E GIPSYWIDSE RIGPGN+I+YKL HGEL+E ENWLP+G ITIG+TSGASTPDK
Sbjct: 121 QEIGELSGIPSYWIDSEVRIGPGNRISYKLNHGELIEAENWLPQGPITIGVTSGASTPDK 180
Query: 348 AVEDVLKKVFEIKREEALQLA 368
VED L +VFEIKR+E LQ+A
Sbjct: 181 VVEDALHRVFEIKRQELLQVA 201
>gi|189220130|ref|YP_001940770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum infernorum V4]
gi|189186988|gb|ACD84173.1| 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Methylacidiphilum infernorum V4]
Length = 419
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 242/378 (64%), Gaps = 27/378 (7%)
Query: 3 QEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITN 62
+ Y S ++ LK G + G + VKLA+++GFC+GVERA+ +AY K FP ++I++
Sbjct: 29 KHYRSPLVDYLKTTGGSLSGGGITVKLAKAFGFCYGVERAIDLAYATTKVFPTKRIFLLG 88
Query: 63 EIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI 122
EIIHNP VN +L M ++ + EG D + DVV++PAFGA VE M + QI
Sbjct: 89 EIIHNPEVNDQLTAMGIKRLQAVEGGYFLDGLTADDVVIIPAFGAEVETMKRIQQIGCQI 148
Query: 123 VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA------GKYIIVKNMKE 176
VDTTC V VW V +++K TSIIHGK HEET ATAS A G Y++V N++E
Sbjct: 149 VDTTCGDVMTVWKRVRQYRKEGATSIIHGKAWHEETKATASRAIGEDGNGHYLVVYNLEE 208
Query: 177 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
+YVC+YI G K+ FLEKFK AVS GFDPDV L VG+ANQTTM++GETEE+
Sbjct: 209 TDYVCNYIRYG------GDKKEFLEKFKGAVSPGFDPDVHLCHVGVANQTTMMRGETEEV 262
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE-EKVDLILVV------- 288
+ + K + ++G EN++EHF F+TIC ATQERQDA+ M++ EK+DL++VV
Sbjct: 263 QRRICKAIEDRYGKENLHEHFRFFDTICGATQERQDALLDMLDKEKLDLLIVVGGYNSSN 322
Query: 289 -----EIAEDRGIPSYWI-DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 342
EI E R +P+Y+I ++EK I + L G+ V E WL +G+I +GIT+GA
Sbjct: 323 TSHLAEIGESR-LPTYFIKNAEKLISTRQIQHWDLHKGQEVITEGWLKEGEINVGITAGA 381
Query: 343 STPDKAVEDVLKKVFEIK 360
S P+ +E+ ++++FE++
Sbjct: 382 SCPNNLIEETIQRLFELR 399
>gi|223936626|ref|ZP_03628537.1| hydroxymethylbutenyl pyrophosphate reductase [bacterium Ellin514]
gi|223894790|gb|EEF61240.1| hydroxymethylbutenyl pyrophosphate reductase [bacterium Ellin514]
Length = 407
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 235/374 (62%), Gaps = 24/374 (6%)
Query: 4 EYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNE 63
Y S+++++++ NG + G + VKLA+ +GFC+GVERA+ +AY ARK FP + I+I E
Sbjct: 30 HYRSELVERIRANGNVVSAGGLTVKLAKEFGFCYGVERAIDLAYAARKVFPNQPIYILGE 89
Query: 64 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 123
IIHNP VN ++ M ++++ +E D + K D+V++PAFG V L K + V
Sbjct: 90 IIHNPEVNDQIRAMGIKSLSGKEKDADVDDLKKDDIVIIPAFGTEVATREKLQAKGCRFV 149
Query: 124 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS----FAGKYIIVKNMKEAEY 179
DTTC V VW V ++ TSIIHGK HEET AT+S G Y++V + E +Y
Sbjct: 150 DTTCGDVMSVWKRVRQYSNDRVTSIIHGKAWHEETKATSSQTTNRGGHYLVVFTLAETDY 209
Query: 180 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 239
VC++IL G +KE FL KFK A S+GFDPDV L +G+ANQTTML+GETEE+ +
Sbjct: 210 VCNFILKG------GSKEEFLNKFKGAYSEGFDPDVHLQAIGVANQTTMLRGETEEVQRR 263
Query: 240 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------- 288
+ M K+G + V +HF F+TIC ATQ+RQDA+ K++ ++L+LV+
Sbjct: 264 LRNAMTEKYGTDKVEQHFRFFDTICGATQDRQDALEKLLRVPINLLLVIGGYNSSNTSHL 323
Query: 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH-GELVEKENWLPKGQITIGITSGASTPD 346
E+ E + +P+Y+I + ++ I + H G+ VE +WLP G IT+GIT+GAS P+
Sbjct: 324 AEMGEAK-LPTYFIKNAAKMVSDKVIFHYNQHIGKEVETSDWLPSGNITVGITAGASCPN 382
Query: 347 KAVEDVLKKVFEIK 360
+ED ++++FE++
Sbjct: 383 NLIEDTIRRLFELR 396
>gi|196231723|ref|ZP_03130580.1| hydroxymethylbutenyl pyrophosphate reductase [Chthoniobacter flavus
Ellin428]
gi|196224195|gb|EDY18708.1| hydroxymethylbutenyl pyrophosphate reductase [Chthoniobacter flavus
Ellin428]
Length = 412
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 238/382 (62%), Gaps = 25/382 (6%)
Query: 4 EYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNE 63
Y S+I++KL+ G + V V+LA+ +GFC+GVERA+ +AY A K F + +++I E
Sbjct: 30 HYRSEIVEKLRAGGGTLSCDGVTVRLAKQFGFCYGVERAIDLAYAAAKVFQDRRLFILGE 89
Query: 64 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 123
IIHNP VN+++ + ++N+ ++ + + + DVV++PAFG V + + QIV
Sbjct: 90 IIHNPEVNEQIVALGIKNLLGKDKEAEVQDLRGDDVVIVPAFGTDVGTLARIKELGCQIV 149
Query: 124 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-----GKYIIVKNMKEAE 178
DTTC V VW V ++ D TSIIHGK SHEET ATAS A G Y++V + + +
Sbjct: 150 DTTCGDVMSVWKRVRQNASDDVTSIIHGKASHEETKATASRAVVSGKGHYLVVLTLADTD 209
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVC+YI G K AFLEKF+ A S+GFDPD L +VG+ANQTTM++GETEE+ +
Sbjct: 210 YVCNYIRHG------GDKAAFLEKFRGAFSEGFDPDRHLRRVGVANQTTMMRGETEEVQR 263
Query: 239 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV---------- 288
+E + + G E ++F F+TIC ATQERQDA+ +M++ ++DL+LV+
Sbjct: 264 RIEAAVRDRDGAEPAKQNFRFFDTICGATQERQDALKEMLDSRMDLLLVIGGYNSSNTSH 323
Query: 289 --EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPKGQITIGITSGASTP 345
E+ E + +P+Y+I + R+ +I + H + + ENWLP+ +TIG+T+GAS P
Sbjct: 324 LAEMGEAK-LPTYFIRNAGRLESRQRIVHFDQHAKQEIATENWLPERPVTIGLTAGASCP 382
Query: 346 DKAVEDVLKKVFEIKREEALQL 367
+ +E+ + +++E+ A QL
Sbjct: 383 NNLIEETILRIYELHGISAQQL 404
>gi|226228164|ref|YP_002762270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gemmatimonas
aurantiaca T-27]
gi|226091355|dbj|BAH39800.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gemmatimonas
aurantiaca T-27]
Length = 437
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 234/387 (60%), Gaps = 31/387 (8%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ +YT ++ L+E + G+ ++LA +GFC+GVERAV AY+ R++FPE +I++
Sbjct: 47 LAADYTGHLVDLLRERDYALEAGDTTIRLAREFGFCYGVERAVDYAYQTRRKFPERRIFL 106
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV--VNKGDVVVLPAFGAAVEEMVTLNNK 118
EIIHNP VN +L+EM V I + K FD V DVV+LPAFG +++ TL
Sbjct: 107 AGEIIHNPHVNAKLQEMGV--IFLSAKGKGFDYAPVEPKDVVILPAFGVTIQDFQTLREL 164
Query: 119 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-----FAGKYIIVKN 173
+VDTTC V VW VE + + +TS+IHGKY HEET ATAS G+Y++V++
Sbjct: 165 GCVVVDTTCGSVLNVWKRVEAYARDGFTSLIHGKYYHEETRATASQVEKYNGGQYLVVRD 224
Query: 174 MKEAEYVCDYI---LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 230
M EAE V DY+ G + ++EAFLE+F KA S GFDPDV L +VG+ANQTTML
Sbjct: 225 MAEAELVMDYLEDRAGVQPAREPLSREAFLERFAKAASDGFDPDVHLERVGVANQTTMLA 284
Query: 231 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVE- 289
E+ IG V ++M R +G + EHF +F+TIC ATQ+RQDA+ +++ + +DL++VV
Sbjct: 285 RESLAIGAAVGESMTRGYGEAHRAEHFRTFDTICSATQDRQDAVMELLRDPLDLMVVVGG 344
Query: 290 ------------IAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKE--NWLP-KGQ 333
AE +P+Y I I N++ Y+ + + E E +WLP G
Sbjct: 345 YNSSNTISLAALCAEQ--VPTYHIADPDEIDVAENRVRYRRIGAKHHEDEMSSWLPTTGP 402
Query: 334 ITIGITSGASTPDKAVEDVLKKVFEIK 360
+ IGIT+GASTP+ + + +VF I+
Sbjct: 403 LRIGITAGASTPNNKIGQAVARVFAIR 429
>gi|347755996|ref|YP_004863559.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Chloracidobacterium thermophilum B]
gi|347588513|gb|AEP13042.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Candidatus Chloracidobacterium
thermophilum B]
Length = 401
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 235/377 (62%), Gaps = 31/377 (8%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ ++ S +++++K +G + G + +LA+ +GFC+GV+ A+ +AYE +FP ++++
Sbjct: 34 IRNDFDSALVQRIKASGGTHQAGRLTFRLAQEFGFCYGVDHALDLAYETHVRFPNRRVYL 93
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
T EIIHNPTVN++L M + + D V D+V++PAFGA E+ L
Sbjct: 94 TGEIIHNPTVNEQLARMGYCFL------RPGDEVTADDIVLIPAFGAPTHELERLKRIGC 147
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-----GKYIIVKNMK 175
+VDTTC V VW VEK+ + +T+IIHGKY HEET AT S GK+++V++
Sbjct: 148 LLVDTTCGSVVHVWKRVEKYAREGFTAIIHGKYDHEETEATRSRTTLYPNGKFLVVRDRV 207
Query: 176 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 235
+A+ VCDYILG ++EAFL ++ + GFDPD DL +VG+ANQTTML E+ E
Sbjct: 208 QAQDVCDYILG------RGSREAFLARYAAVATPGFDPDRDLQRVGLANQTTMLSSESLE 261
Query: 236 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------- 288
I +++ + + +++G E V F SF+TIC ATQERQDA+ K++EE +DL++VV
Sbjct: 262 IAEMIRRAIEQRYGPEEVKTRFRSFDTICSATQERQDAILKLIEEPLDLVIVVGGYNSSN 321
Query: 289 -----EIAEDRGIPSYWIDSEKRIGPGNKIAYK-LMHGELVEKENWLPKGQITIGITSGA 342
EIA +R +P+Y I++ + + +I +K E +WLP+G +TIGIT+GA
Sbjct: 322 TEHLCEIAAER-LPTYHINAPECLVSAREIRHKPAFSKEETTSWDWLPEGPVTIGITAGA 380
Query: 343 STPDKAVEDVLKKVFEI 359
STP+K V D ++++ +
Sbjct: 381 STPNKVVGDCIERIVAL 397
>gi|171914430|ref|ZP_02929900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Verrucomicrobium spinosum DSM 4136]
Length = 430
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 236/378 (62%), Gaps = 30/378 (7%)
Query: 5 YTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEI 64
Y S +++ L++ G T GN ++LA +GFC+GVERA+ +AY AR+ F + ++++ EI
Sbjct: 39 YRSVLVENLRKAGGFMTVGNTTIRLARDFGFCYGVERAIDLAYAARRVFADRRVFLLGEI 98
Query: 65 IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
IHNP VN++L EM + +IP+ + + + DVV++PAFGA + M ++ + +VD
Sbjct: 99 IHNPEVNRQLTEMGIVSIPISQHLEAVSKLGPEDVVIVPAFGAETQLMNIISERGCLVVD 158
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA------GKYIIVKNMKEAE 178
TTC V VW V + K +TSIIHGK SHEET AT+S A G +++V + + +
Sbjct: 159 TTCGDVMSVWKRVRGYAKQGFTSIIHGKASHEETRATSSRAQGDDGKGNFVVVLTLGDVD 218
Query: 179 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
YVCDYI G +E FL++F+ A+S GFDPD L +VG+ANQTTMLK ETEE+ +
Sbjct: 219 YVCDYIRHG------GNREEFLKRFEGAMSPGFDPDQHLKRVGVANQTTMLKSETEELQR 272
Query: 239 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILV----------- 287
V++ ++ + G E ++F F+TIC ATQERQD++++M+ + +D++LV
Sbjct: 273 RVQQAVIDRDGPEPAQQNFQVFDTICGATQERQDSLFEMLRKPLDILLVVGGYNSSNTTH 332
Query: 288 -VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK----ENWLPKGQITIGITSGA 342
VEI E + +P+++I + + + +I + +H + EK E K I +GIT+GA
Sbjct: 333 LVEIGE-KELPTFFIRTAELLKSFTEIVHFDLHLK-AEKTSYSEKLASKEPIVVGITAGA 390
Query: 343 STPDKAVEDVLKKVFEIK 360
S P+ +ED + +VFE++
Sbjct: 391 SCPNNLIEDTILRVFELR 408
>gi|108805030|ref|YP_644967.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrobacter
xylanophilus DSM 9941]
gi|108766273|gb|ABG05155.1| hydroxymethylbutenyl pyrophosphate reductase [Rubrobacter
xylanophilus DSM 9941]
Length = 410
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 249/394 (63%), Gaps = 36/394 (9%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
++++Y S+I+ +++ G++ ++LA+ +GFC+GV+RAV A++ R++FP+ +I++
Sbjct: 21 LDRDYRSEIVDEIRRRNNVLEAGDLTLRLADEFGFCYGVDRAVDYAFQTREKFPDRRIFL 80
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVE-EGK--KQFDVVNKGDVVVLPAFGAAVEEMVTLNN 117
T ++IHN ++N RL EM ++ + +G+ ++F+ +++ DVV+LPAFGA VE + L
Sbjct: 81 TGDMIHNASMNARLREMGIEFLSQGFDGRPDERFEDLDEEDVVILPAFGAPVEWVGKLRE 140
Query: 118 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA------GKYIIV 171
+ IVDTTC V VW V ++ + +TSIIHGKY HEET ATAS GKY+IV
Sbjct: 141 RGCIIVDTTCGSVLSVWKRVARYAQKGFTSIIHGKYYHEETRATASQTRREGGNGKYLIV 200
Query: 172 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 231
+++KE Y+ D+I G +S E E+ +S GFDP+ DLV+VG+ANQTTML
Sbjct: 201 RDLKETGYLTDFI-----RGRTSAGE-LKERLGHGMSPGFDPERDLVRVGVANQTTMLMT 254
Query: 232 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVE-- 289
ET ++G+ + K M ++G EN+ EHF F+TIC ATQ+RQDA+ +++E +D++++V
Sbjct: 255 ETMKVGEEIRKAMEERYGRENLAEHFELFDTICSATQDRQDALMRLLEHPLDVVVIVGGY 314
Query: 290 ----------IAEDRGIPSYWIDSEKRIGPGNKIAYK-----LMHGELVEKENWLPKGQI 334
IA R SY I + + I G I +K L E VE+E WLP+G +
Sbjct: 315 NSSNTNNLAIIAAGRVPRSYHIANGECI-RGASIRHKPPGTPLDPREEVEEEGWLPEGPV 373
Query: 335 TIGITSGASTPDKAVEDVLKKVFE---IKREEAL 365
+G+T+GASTP+ + ++++ E I+ EEAL
Sbjct: 374 RVGLTAGASTPNSQIGLAVRRILEARGIRVEEAL 407
>gi|187736135|ref|YP_001878247.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Akkermansia
muciniphila ATCC BAA-835]
gi|187426187|gb|ACD05466.1| hydroxymethylbutenyl pyrophosphate reductase [Akkermansia
muciniphila ATCC BAA-835]
Length = 399
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 232/384 (60%), Gaps = 33/384 (8%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ Q Y S++I ++ G Y G+ + LA +GFC GV RA+ IAY AR+ FP+ +I++
Sbjct: 26 IQQHYQSELISHIRSAGNVYNLGHTEFFLAREFGFCNGVRRAIDIAYAARRVFPDRRIFL 85
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 120
+IIHNP VN++LEEM ++ +P ++ +D V DVV++PAFG M L K V
Sbjct: 86 IGDIIHNPEVNRQLEEMGIRKLPWKQLDSSYDRVAPDDVVIIPAFGVPTPFMDALEEKGV 145
Query: 121 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA------GKYIIVKNM 174
QIVDTTC V KVW V+ + TSIIHGK +HEET ATAS A GKY++V ++
Sbjct: 146 QIVDTTCGDVMKVWKRVKNYAAMGITSIIHGKATHEETSATASRALGERGRGKYLVVYDL 205
Query: 175 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 234
++A +CDYI+G +EAFL++F+ S GFDPD DL +VGIANQTTMLK ET+
Sbjct: 206 EDARILCDYIMG------RGDREAFLKRFEGCCSPGFDPDRDLEEVGIANQTTMLKTETQ 259
Query: 235 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILV------- 287
+ K+V+ ++++ G + ++F F+TIC ATQ+RQDA+Y++++ +D++ V
Sbjct: 260 TLQKMVKDAIVQRDGDD---DNFYVFDTICGATQDRQDALYELLKNPLDVMFVVGGYNSS 316
Query: 288 -----VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ-----ITIG 337
V+IA + +P+Y+I+S + I + V + P Q + +G
Sbjct: 317 NTTHLVDIAREH-VPTYFIESAECIKSIQYVDAFDTKTREVRRMTTEPVVQNLGKSLKVG 375
Query: 338 ITSGASTPDKAVEDVLKKVFEIKR 361
IT+GAS P +E + ++ ++++
Sbjct: 376 ITAGASCPANLIEATILRIADLRK 399
>gi|45737903|gb|AAS75818.1| isopentenyl/dimethylallyl diphosphate synthase [Nicotiana
benthamiana]
Length = 166
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 12/166 (7%)
Query: 171 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 230
VKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIANQTTMLK
Sbjct: 1 VKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIANQTTMLK 60
Query: 231 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-- 288
GETEEIGKLVE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V+EK+DL+LVV
Sbjct: 61 GETEEIGKLVERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDEKLDLMLVVGG 120
Query: 289 ----------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
EIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVE
Sbjct: 121 WNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVE 166
>gi|68271953|gb|AAY89245.1| putative penicillin tolerance protein [uncultured bacterium
BAC-L1N9]
Length = 402
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 215/382 (56%), Gaps = 33/382 (8%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI 60
+ +Y+S ++ L+ G+E G ++ +LA +GFC+GV+RAV+ AYE R +FP +++++
Sbjct: 20 LTSDYSSAVVDALRAGGYELRAGELRFRLAREFGFCYGVDRAVEYAYETRTKFPGKRVFL 79
Query: 61 TNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 119
EIIHNP VN +L M + + +G+ ++ DVV+LPAFG V + L
Sbjct: 80 VGEIIHNPHVNAKLAAMGIIELGQGPDGRFDLSMLTAEDVVILPAFGVTVADFERLRALG 139
Query: 120 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-----FAGKYIIVKNM 174
+VDTTC V VW VE + + +T++IHGKY HEET ATAS G++++V NM
Sbjct: 140 SVLVDTTCGSVLNVWKRVESYARDGFTALIHGKYYHEETRATASQVTKHAGGRFLVVLNM 199
Query: 175 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 234
EA VCD+I G S F A+S GFD DL ++G+ANQTTML GE+
Sbjct: 200 DEARLVCDFIEG------SGDAAQLAAHFSAAMSPGFDFTRDLERIGVANQTTMLSGESL 253
Query: 235 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------ 288
I + K+ +R+ G + V HF +F+TIC ATQERQDA+ +++E +DL++VV
Sbjct: 254 AIAHEIRKSFVRRHGEDTVAAHFRTFDTICSATQERQDAVIQLLENPMDLMIVVGGYNSS 313
Query: 289 ------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK-----ENWLPKGQITIG 337
+ DRG+ +Y I+ + + L H V+ WL TIG
Sbjct: 314 NTTHLAALCRDRGVTAYHIEDASAVDIETGM---LRHQPRVKAPEATVSGWLDNVH-TIG 369
Query: 338 ITSGASTPDKAVEDVLKKVFEI 359
IT+GASTP+ + + + ++ +
Sbjct: 370 ITAGASTPNNKIGETILRICAV 391
>gi|347755465|ref|YP_004863029.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Chloracidobacterium thermophilum B]
gi|347587983|gb|AEP12513.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Candidatus Chloracidobacterium
thermophilum B]
Length = 408
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 217/380 (57%), Gaps = 33/380 (8%)
Query: 3 QEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITN 62
+ S I++ +++ + G + + LA +GFC+GV+ A+++AYEAR++F + KI++
Sbjct: 31 HHFGSAIVEAIRQQDYTCRVGRLTLHLAREFGFCYGVDDALELAYEARRRFHDRKIYLAG 90
Query: 63 EIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI 122
EIIHNP VN +L + +Q + +G + DVV++PAFG E+ L +
Sbjct: 91 EIIHNPMVNGQLAAVGIQPL---DGLAH---LTPQDVVIIPAFGLPTPELSRLRQTGCTL 144
Query: 123 VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-----FAGKYIIVKNMKEA 177
+DTTC V VW VE++ + +T++IHGKY HEET AT S G+Y++V+++ EA
Sbjct: 145 IDTTCGSVVHVWKRVERYARDGFTTVIHGKYDHEETAATRSQVLAIPGGRYVVVRDLSEA 204
Query: 178 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 237
E + D I G + + + F + S GFDP DL K+G+ANQTTML E+ I
Sbjct: 205 ERLADVISGLQ------PVDMLHDFFARFASPGFDPRRDLEKIGLANQTTMLASESLAIA 258
Query: 238 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV--------- 288
+ + M ++G + V F SF+TIC ATQ RQDA+ +++ DL+LVV
Sbjct: 259 ERLRAAMTVRYGEDEVPFRFRSFDTICSATQVRQDAVAQLLAYGPDLMLVVGGYNSSNTG 318
Query: 289 ---EIAEDRGIPSYWIDSEKRIGPGNKIAYK--LMHGELVEKENWLPKGQITIGITSGAS 343
E+A P+Y I + +I +K GE VE +WLP G++TIG+TSGAS
Sbjct: 319 HLCEMAAAV-CPTYHITGADCLVSAERIRHKPAFQTGE-VESHHWLPAGKLTIGLTSGAS 376
Query: 344 TPDKAVEDVLKKVFEIKREE 363
TPD+ + +V+ ++ ++ E
Sbjct: 377 TPDRILGEVIVRLIDVAGES 396
>gi|268316278|ref|YP_003289997.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
DSM 4252]
gi|262333812|gb|ACY47609.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
DSM 4252]
Length = 411
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 225/387 (58%), Gaps = 41/387 (10%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II ++KE F T +G V+ KLA +GFC+GVE+AV+IAY A ++
Sbjct: 11 YRSPIISRVKEARRRQDPRKKDFSPTVLDFGPVRFKLARHFGFCYGVEQAVEIAYRALEE 70
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P +I++ +E+IHNP VN+ LE+ V+ + G++ FDV+ D+V++PAFG E
Sbjct: 71 NPGRRIFLLSEMIHNPHVNRDLEQRGVRFLRTTRGEQLIPFDVLRPDDIVIIPAFGTTPE 130
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK- 167
L + V + DTTCP+V KVW + + YT +IHGK HEET AT + A +
Sbjct: 131 IEAELAARGVDVRRYDTTCPFVEKVWKRSSQLGQRGYTIVIHGKRYHEETRATFARAARE 190
Query: 168 --YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++V++++EA + ++ GE + + F E+F S+GFDP+ DLV++G+ NQ
Sbjct: 191 APVVVVRDLEEAADLAR-VIRGEADAAF-----FYERFHDRYSEGFDPERDLVRIGVVNQ 244
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYKMVEEKVDL 284
TTML ET+ I +L+ + M+ ++G EN++EHF + +T+C AT E Q A +++ DL
Sbjct: 245 TTMLATETQAIAELLRQAMIDRYGPENLHEHFADTSDTLCYATHENQQATRALIDSGGDL 304
Query: 285 ILV------------VEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMHGELVEKENWLPK 331
LV VE+ +R +P+Y++ E+ + P Y L G + E ENWLP
Sbjct: 305 ALVVGGYNSSNTSHLVELCAER-MPTYFVKGPEELLSPARIRHYDLELGAVRETENWLPA 363
Query: 332 GQ-ITIGITSGASTPDKAVEDVLKKVF 357
+ + I +T+GAS PD +E VL++V
Sbjct: 364 HRPVEIVLTAGASCPDALLEAVLQRVL 390
>gi|345304007|ref|YP_004825909.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113240|gb|AEN74072.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
SG0.5JP17-172]
Length = 411
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 225/387 (58%), Gaps = 41/387 (10%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II ++KE F T +G V+ KLA +GFC+GVE+AV+IAY A ++
Sbjct: 11 YRSPIISRVKEARRRQDPRKKDFSPTVLDFGPVRFKLARHFGFCYGVEQAVEIAYRALEE 70
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P +I++ +E+IHNP VN+ LE+ V+ + G++ FDV+ D+V++PAFG E
Sbjct: 71 NPGRRIFLLSEMIHNPHVNRDLEQRGVRFLRTTRGEQLIPFDVLRPDDIVIIPAFGTTPE 130
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK- 167
L + V + DTTCP+V KVW + + YT +IHGK HEET AT + A +
Sbjct: 131 IEAELAARGVDVRRYDTTCPFVEKVWKRSSQLGQRGYTIVIHGKRYHEETRATFARAARE 190
Query: 168 --YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++V++++EA + ++ GE + + F E+F S+GFDP+ DLV++G+ NQ
Sbjct: 191 APVVVVRDLEEAADLAR-VIRGEADAAF-----FYERFHDRYSEGFDPERDLVRIGVVNQ 244
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYKMVEEKVDL 284
TTML ET+ I +L+ + M+ ++G EN++EHF + +T+C AT E Q A +++ DL
Sbjct: 245 TTMLATETQAIAELLRQAMIDRYGPENLHEHFADTSDTLCYATHENQQATRALIDSGGDL 304
Query: 285 ILV------------VEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMHGELVEKENWLPK 331
LV VE+ +R +P+Y++ E+ + P Y L G + E E+WLP
Sbjct: 305 ALVVGGYNSSNTSHLVELCAER-MPTYFVKGPEELLSPTRIRHYDLALGAVRETESWLPA 363
Query: 332 GQ-ITIGITSGASTPDKAVEDVLKKVF 357
+ + I +T+GAS PD +E VL++V
Sbjct: 364 HRPVEIVLTAGASCPDALLEAVLQRVL 390
>gi|385808992|ref|YP_005845388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ignavibacterium
album JCM 16511]
gi|383801040|gb|AFH48120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ignavibacterium
album JCM 16511]
Length = 407
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 213/357 (59%), Gaps = 29/357 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ LA +GFC+GVE A++IAY+ ++ P+++I++ +E+IHNP VN L+++ V+
Sbjct: 39 FGAVRFLLARHFGFCYGVENAIEIAYKTIEENPDKRIFLLSEMIHNPGVNLDLQKLGVKF 98
Query: 82 IPVEEGKKQFD--VVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSV 137
+ G D + K D+V++PAFG +E LN + +TTCP+V KVW
Sbjct: 99 LMDTAGNHLIDWSELTKDDIVIIPAFGTTLEIEQKLNELGIDPYRYNTTCPFVEKVWNRS 158
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSS 194
E+ K +YT IIHGK+ HEET AT S + +IV+++ EA+ + +IL
Sbjct: 159 EQLGKQNYTVIIHGKHYHEETRATFSHSKTNAPSVIVRDINEAKILASFIL------DEK 212
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN 254
E F + F S+ F+ DL +VG+ NQTTML ET+EI L++ TM++K+G EN+
Sbjct: 213 PSEEFYKIFAGKYSENFNVKKDLARVGVVNQTTMLATETQEIADLLKSTMVKKYGSENLK 272
Query: 255 EHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
+HF + +T+C AT + Q+A Y +++E D +V VE+ E++ +P+Y+I
Sbjct: 273 DHFADTRDTLCYATNDNQEATYALLKEPADFAIVVGGYNSSNTSHIVELCEEK-LPTYFI 331
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKEN-WLP-KGQITIGITSGASTPDKAVEDVLKKV 356
SE++I +I + +H + N ++P K ++ I +TSGAS PD VE VL+KV
Sbjct: 332 SSEEKIISSTQIKHFDIHSHQEKITNDFIPAKDKVDIILTSGASCPDAVVEAVLRKV 388
>gi|255037295|ref|YP_003087916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dyadobacter
fermentans DSM 18053]
gi|254950051|gb|ACT94751.1| hydroxymethylbutenyl pyrophosphate reductase [Dyadobacter
fermentans DSM 18053]
Length = 407
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 206/360 (57%), Gaps = 31/360 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ +A +GFC+GVE A+ IAY+A + P ++I++ +E+IHNP VN+ L E VQ
Sbjct: 39 FGPVQFLIARHFGFCYGVENAIDIAYKAIAENPGKRIFLLSEMIHNPDVNRDLVERGVQF 98
Query: 82 IPVEEGKKQF--DVVNKGDVVVLPAFGAAVEEMVTLN--NKNVQIVDTTCPWVSKVWTSV 137
I +G + D + D+V++PAFG VE L+ N + DTTCP+V KVW
Sbjct: 99 IMDTKGNQLIGWDQLTAEDIVIVPAFGTTVENQAKLSELGVNAYVYDTTCPFVEKVWNRA 158
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSS 194
+ + DYT ++HGK +HEET AT S + ++V+NMK+A+ + +Y+ G L
Sbjct: 159 AQIGEKDYTIVVHGKPNHEETRATFSHSKENAPTVVVENMKQAQILAEYMTGIRLAAQ-- 216
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--EN 252
F E FK S+GFDP+ DL ++G+ NQTTML +T+ I ++ M+R + + E
Sbjct: 217 ----FFEDFKNQYSEGFDPEKDLQRIGVVNQTTMLASDTQGIADYLKNVMIRHYSLRPEQ 272
Query: 253 VNEHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSY 299
V + F + +T+C AT + QDA Y ++ DL++V VE+ E R P+Y
Sbjct: 273 VEDRFANTRDTLCYATNDNQDATYALLTHDADLVVVAGGYNSSNTTHLVELCE-RKFPTY 331
Query: 300 WIDSEKRIGPGNKIAYKLMH-GELVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKVF 357
+I+S +I I + +H E V EN++P K + I +T GAS PD VE +L ++
Sbjct: 332 FIESVNKILDRQLIRHFDLHKKEEVVTENYIPDKTPVRIMLTCGASCPDAVVEGILVRLL 391
>gi|338211698|ref|YP_004655751.1| hydroxymethylbutenyl pyrophosphate reductase [Runella slithyformis
DSM 19594]
gi|336305517|gb|AEI48619.1| hydroxymethylbutenyl pyrophosphate reductase [Runella slithyformis
DSM 19594]
Length = 408
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 220/389 (56%), Gaps = 43/389 (11%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II LKE F T +G VK +A +GFC+GVE A++IAY+A +
Sbjct: 10 YRSRIITPLKELRRKNDKLKRDFTPTVLDFGTVKFLIARHFGFCYGVENAIEIAYKAIAE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P ++I++ +E+IHNP VN+ L E V+ + G++ ++ + D+V++PAFG VE
Sbjct: 70 NPGKRIFLLSEMIHNPDVNRDLLERGVRFLMETTGRQIIPWEELRPADIVIVPAFGTTVE 129
Query: 111 --EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--- 165
+TL + DTTCP+V KVW + + +YT ++HGK HEET AT S +
Sbjct: 130 IQNRLTLLGIDAYQYDTTCPFVEKVWNRASQIGQKNYTIVVHGKPLHEETRATFSHSKEN 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
I+VKNMK+ E + YI G TKE F E+F+ S GFDP+ DL ++G+ NQ
Sbjct: 190 APTIVVKNMKQTERLARYITG------EGTKEEFYEEFRGQYSVGFDPEQDLQRIGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAMYKMVEEKV 282
TTML +T+ I ++ M + + + + V E F + +T+C AT + QDA Y +++
Sbjct: 244 TTMLASDTQGIADYLKGVMAQHYQLSPQEVEERFANTRDTLCYATNDNQDATYALLQYDA 303
Query: 283 DLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE-KENWL 329
D +LV VE+ E + +P+Y+I+S+ +I + I + +H + E EN++
Sbjct: 304 DFVLVAGGYNSSNTSHIVELCEQK-LPTYFIESDTKILSNSLIKHYNLHTKKEEVTENFI 362
Query: 330 P-KGQITIGITSGASTPDKAVEDVLKKVF 357
P K Q+T+ +T GAS PD +E VL ++
Sbjct: 363 PEKEQVTVMLTCGASCPDAIIEGVLTRML 391
>gi|436833687|ref|YP_007318903.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrella aestuarina
BUZ 2]
gi|384065100|emb|CCG98310.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrella aestuarina
BUZ 2]
Length = 410
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 217/396 (54%), Gaps = 45/396 (11%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II LKE F T +G V+ ++A +GFC+GVE A++IAY+A +
Sbjct: 10 YRSTIITPLKEYRRKRDKLKRDFTPTTLDFGPVRFQIARHFGFCYGVENAIEIAYKAIAE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P ++I++ +E+IHNP VN L VQ + G++ F + DVV++PAFG +E
Sbjct: 70 NPGKRIFLLSEMIHNPDVNADLLSRGVQFLLDTSGRQLIPFTELTPADVVIIPAFGTTLE 129
Query: 111 EMVTLNN--KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF---A 165
L +V+ +TTCP+V KVW + K +YT ++HGK +HEET AT S +
Sbjct: 130 TQRELAQIGLDVETYNTTCPFVEKVWNKASQIGKKEYTIVVHGKPTHEETRATFSHSKES 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++VKNM +A+ + YI G + E F ++F S GFDP DL ++G+ NQ
Sbjct: 190 APTVVVKNMAQAQRLALYITG------ERSPEQFYDEFAGQYSAGFDPARDLRRIGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVE----NVNEHFI-SFNTICDATQERQDAMYKMVEE 280
TTML +T+ I ++ M+R++G+E +V EHF + +T+C AT + QDA Y ++
Sbjct: 244 TTMLASDTQGIADFLKLVMIRQYGLEEGSASVEEHFANTRDTLCYATNDNQDATYALLTY 303
Query: 281 KVDLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIA-YKLMHGELVEKEN 327
DL +V VE+ ++ +P+Y+I+S ++ I + L + + EN
Sbjct: 304 PADLAIVAGGYNSSNTSHIVELCAEK-LPTYFIESADKMLSDTLIRHFDLATKQEIVTEN 362
Query: 328 WLPKGQ-ITIGITSGASTPDKAVEDVLKKVFEIKRE 362
+LP + IT+ +T GAS PD VE +L ++ E
Sbjct: 363 YLPATRPITVLLTCGASCPDAVVEGILNRLLSFFPE 398
>gi|392968895|ref|ZP_10334311.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrisoma limi BUZ 3]
gi|387843257|emb|CCH56365.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrisoma limi BUZ 3]
Length = 409
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 219/388 (56%), Gaps = 43/388 (11%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II LKE F T +G ++ +A +GFC+GVE AV+IAY+A +
Sbjct: 10 YRSSIITPLKEFRRKRDKLKRDFTPTLLDFGPIRFYIARHFGFCYGVENAVEIAYKAIAE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P ++I++ +E+IHNP VN L+ V+ + G++ + + DVV++PAFG +E
Sbjct: 70 NPGKRIFLLSEMIHNPDVNADLQSRGVRFLMDTSGRQLTPWSELTPEDVVIIPAFGTTLE 129
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF---A 165
L + I DTTCP+V KVW + + Y+ ++HGK SHEET AT S +
Sbjct: 130 TQQQLAAIGLDIEKYDTTCPFVEKVWNKASQIGQKHYSVVVHGKPSHEETRATFSHSKES 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++VKNM +A+ + YI GEL +E F ++F S GFDPD DL ++G+ NQ
Sbjct: 190 APTVVVKNMAQAQRLAKYI-TGEL-----PREQFFDEFAGQYSDGFDPDRDLQRIGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAMYKMVEEKV 282
TTML +T+ I +++ M++K + + V+E F + +T+C AT + QDA Y ++
Sbjct: 244 TTMLASDTQGIADYLKQVMIQKHNLTPDQVDERFANTRDTLCYATNDNQDATYALLTYPA 303
Query: 283 DLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWL 329
D +V VE+ E++ +P+Y+I+SE++I I + +HG + V EN+L
Sbjct: 304 DFAVVAGGYNSSNTSHIVELCEEK-LPTYFIESEQKILSNTLIRHFDLHGKQEVVTENYL 362
Query: 330 PKGQ-ITIGITSGASTPDKAVEDVLKKV 356
P + +T+ +T GAS PD VE +L K+
Sbjct: 363 PANRPVTVLLTCGASCPDAVVEGILVKL 390
>gi|294878855|ref|XP_002768499.1| LytB protein, putative [Perkinsus marinus ATCC 50983]
gi|239871019|gb|EER01217.1| LytB protein, putative [Perkinsus marinus ATCC 50983]
Length = 202
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 138/169 (81%), Gaps = 2/169 (1%)
Query: 1 MNQEYTSDIIKKLKEN-GFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
+ + + S ++++++ + + T GN+ KLAE++GFCWGVERAV IAYE+R+++P++ IW
Sbjct: 34 LREVHNSTLVEEIQSSPDYTLTVGNITFKLAEAHGFCWGVERAVAIAYESRRRYPDKTIW 93
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPVEEG-KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
+TNE+IHNPTVN+ LEE+ ++ IP + G +K F VV+ GDVV+LPAFGAAV+EM+ L K
Sbjct: 94 MTNEVIHNPTVNRNLEELGIRYIPRDAGNQKDFSVVSAGDVVILPAFGAAVKEMMELKRK 153
Query: 119 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK 167
V IVDTTCPWVSKVW+SVE+HKKG+YTSIIHGK HEET+AT+SFA K
Sbjct: 154 GVTIVDTTCPWVSKVWSSVERHKKGEYTSIIHGKSKHEETIATSSFADK 202
>gi|441496624|ref|ZP_20978851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvivirga
imtechensis AK7]
gi|441439488|gb|ELR72803.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvivirga
imtechensis AK7]
Length = 417
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 215/360 (59%), Gaps = 29/360 (8%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E +G VK +A +GFC+GVE A++I+Y+A ++ P++++++ +++IHN VNK L+
Sbjct: 45 ELDFGPVKFYIARHFGFCYGVENAIEISYKALEENPDKRVFLLSQMIHNQEVNKDLQSRG 104
Query: 79 VQNIPVEEGKK--QFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVW 134
++ I +G + ++ + D+V++PAFG +EE++ VQ +TTCP+V KVW
Sbjct: 105 IEFIMDTDGTQFIPWNELKPEDIVIIPAFGTTLEIEEILKETGIEVQRYNTTCPFVEKVW 164
Query: 135 TSVEKHKKGDYTSIIHGKYSHEETVATASFAGK---YIIVKNMKEAEYVCDYILGGELNG 191
EK K +T IIHGK++HEET AT S + + +IVK+M EA+ +LG + G
Sbjct: 165 KRSEKLGKEHHTIIIHGKHNHEETRATFSHSSQTAPSVIVKDMAEAK-----MLGEAIKG 219
Query: 192 SSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE 251
+ S E F + F+ S+GFDPD K+G+ NQTTML ET+EI +++ ++ G
Sbjct: 220 NISKAE-FFKLFEGKYSQGFDPDKHFDKLGVVNQTTMLATETQEIADYIKQVIIEMHGEN 278
Query: 252 NVNEHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPS 298
+ HF + +T+C AT + QDA Y ++EE DL +V VE+ E R P+
Sbjct: 279 SYKHHFADTRDTLCYATNDNQDATYGLLEEDADLAIVVGGYNSSNTSHIVELCE-RKFPT 337
Query: 299 YWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKV 356
++I+SE+ I ++I + H + VE WLP K ++ I +TSGAS PD V+ V+ K+
Sbjct: 338 FFINSEREIISNDEIHHYDYHNKKKVETIGWLPAKPEVKIILTSGASCPDTLVDQVMLKI 397
>gi|83816455|ref|YP_445992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber DSM 13855]
gi|83757849|gb|ABC45962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber DSM 13855]
Length = 413
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 206/358 (57%), Gaps = 30/358 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ K+A +GFC+GVE+A++IAYEA ++ P+++I++ +E+IHNP VN+ L + +Q
Sbjct: 39 FGPVRFKIARHFGFCFGVEQAIEIAYEALEENPDKRIFLLSEMIHNPHVNEDLRDRGIQF 98
Query: 82 IPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSV 137
+ +G++ FD + DVV++PAFG +E L V + DTTCP+V KVW
Sbjct: 99 LRTTQGEQLIPFDELTPDDVVIIPAFGTTLEVEQKLEEIGVDTEAYDTTCPFVEKVWRKS 158
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSS 194
+ D++ ++HGK HEET AT S A G ++V++M+EAE + I G
Sbjct: 159 SQIGDDDHSIVVHGKRYHEETRATFSHAKEEGPVVVVRDMEEAEELAKVIRG------EK 212
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN 254
+ F + F+ S+ FDP+ DL K+G+ NQTTML ET I L+ M ++G +V
Sbjct: 213 DADFFYDYFEDKYSEDFDPERDLQKLGVVNQTTMLAEETAAIADLMRDAMRERYGEAHVE 272
Query: 255 EHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
E F + +T+C AT E Q+A ++E+ DL +V VE+ E+ +P+Y+I
Sbjct: 273 ERFADTSDTLCYATNENQNATQALIEDGADLGIVVGGYNSSNTSHLVELCEEH-MPTYFI 331
Query: 302 DSEKRIGPGNKIAYKLMHG-ELVEKENWLP--KGQITIGITSGASTPDKAVEDVLKKV 356
++I + +H E V ++W P + + +TSGAS PD +++V++K+
Sbjct: 332 RDASEFDAPSEIHHFDVHAKEEVATDDWFPAEDTPVDVLLTSGASCPDALLDEVVRKI 389
>gi|294507903|ref|YP_003571961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber M8]
gi|294344231|emb|CBH25009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber M8]
Length = 424
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 206/358 (57%), Gaps = 30/358 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ K+A +GFC+GVE+A++IAYEA ++ P+++I++ +E+IHNP VN+ L + +Q
Sbjct: 50 FGPVRFKIARHFGFCFGVEQAIEIAYEALEENPDKRIFLLSEMIHNPHVNEDLRDRGIQF 109
Query: 82 IPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSV 137
+ +G++ FD + DVV++PAFG +E L V + DTTCP+V KVW
Sbjct: 110 LRTTQGEQLIPFDELTPDDVVIIPAFGTTLEVEQKLEEIGVDTEAYDTTCPFVEKVWRKS 169
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSS 194
+ D++ ++HGK HEET AT S A G ++V++M+EAE + I G
Sbjct: 170 SQIGDDDHSIVVHGKRYHEETRATFSHAKEEGPVVVVRDMEEAEELAKVIRG------EK 223
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN 254
+ F + F+ S+ FDP+ DL K+G+ NQTTML ET I L+ M ++G +V
Sbjct: 224 DADFFYDYFEDKYSEDFDPERDLQKLGVVNQTTMLAEETAAIADLMRDAMRERYGEAHVE 283
Query: 255 EHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
E F + +T+C AT E Q+A ++E+ DL +V VE+ E+ +P+Y+I
Sbjct: 284 ERFADTSDTLCYATNENQNATQALIEDGADLGIVVGGYNSSNTSHLVELCEEH-MPTYFI 342
Query: 302 DSEKRIGPGNKIAYKLMHG-ELVEKENWLP--KGQITIGITSGASTPDKAVEDVLKKV 356
++I + +H E V ++W P + + +TSGAS PD +++V++K+
Sbjct: 343 RDASEFDAPSEIHHFDVHAKEEVATDDWFPAEDTPVDVLLTSGASCPDALLDEVVRKI 400
>gi|124004741|ref|ZP_01689585.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microscilla
marina ATCC 23134]
gi|123989864|gb|EAY29393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microscilla
marina ATCC 23134]
Length = 407
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 223/389 (57%), Gaps = 41/389 (10%)
Query: 5 YTSDIIKKLKE------------NGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II ++K+ + F +G+V+V + +GFC+GVE AV+IAY ++
Sbjct: 10 YRSPIIGQVKQIRKETDPRKQDFSPFGLDFGSVQVFVPRHFGFCYGVENAVEIAYRTVEE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P++++++ +E+IHNP VN L+ ++ I G++ ++ + D+V++PAFG +E
Sbjct: 70 NPDKRVFLLSEMIHNPLVNDDLQSRGIRFIMNTSGEQLIPWEEITAEDIVLIPAFGTTIE 129
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--- 165
L ++ DTTCP+V KVW + K + DYT IIHGK +HEET AT S +
Sbjct: 130 IEERLKKMGIETEKYDTTCPFVEKVWKTSAKLGQKDYTVIIHGKANHEETRATFSHSKSE 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
II++NM+EA+ L G + G S +E F F S+ FDP DL KVG+ NQ
Sbjct: 190 APAIIIQNMEEAQK-----LVGVIKGEVSPQE-FYTLFASRFSENFDPSRDLQKVGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYKMVEEKVDL 284
TTML ET++I +TM+ K+G + V +HF + +T+C AT + Q A Y ++E+ DL
Sbjct: 244 TTMLASETQDIADYFRQTMVDKYGKDQVKQHFADTRDTLCYATNDNQRATYGLLEQDADL 303
Query: 285 ILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN-WLP- 330
+V+ E+ E++ +P+Y+I+SE++I + I + H + + + ++P
Sbjct: 304 AIVIGGYNSSNTTHLAELCEEK-LPTYFINSERKIESKHTIQHFNFHTKQEQTTSPFIPD 362
Query: 331 KGQITIGITSGASTPDKAVEDVLKKVFEI 359
K ++ + +T+GAS PD V+ V++ + +
Sbjct: 363 KEKVRLLVTAGASCPDSLVDKVIQHLVSL 391
>gi|397690200|ref|YP_006527454.1| hydroxymethylbutenyl pyrophosphate reductase [Melioribacter roseus
P3M]
gi|395811692|gb|AFN74441.1| hydroxymethylbutenyl pyrophosphate reductase [Melioribacter roseus
P3M]
Length = 411
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 206/361 (57%), Gaps = 31/361 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+GN+ + +A +GFC+GVE A++IAY+ + P ++I++ +E+IHNP VN+ L+ V N
Sbjct: 39 FGNITLLIARHFGFCYGVENAIEIAYKTVRSNPGKRIFLLSEMIHNPHVNEDLKSNGV-N 97
Query: 82 IPVEEGKKQF---DVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTS 136
++ QF D + D+V++PAFG VE L +KN+ IV +TTCP+V KVW
Sbjct: 98 FIMDNHGNQFVPWDEITSDDIVIIPAFGTTVETENLLKSKNIDIVTYNTTCPFVEKVWNR 157
Query: 137 VEKHKKGDYTSIIHGKYSHEETVAT---ASFAGKYIIVKNMKEAEYVCDYILGGELNGSS 193
YT +IHGK+ HEET AT S +IV+++KEA + ++ILG +
Sbjct: 158 SAALGGKGYTIVIHGKHYHEETRATFSHTSLNSPSVIVRDLKEARILSEFILGYK----- 212
Query: 194 STKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENV 253
++ F F+ ++ F DL ++G+ NQTTML ETEEI L+++TM++K+G EN+
Sbjct: 213 -NEKEFYRFFEGKLTPHFKFPEDLERIGVVNQTTMLAEETEEIANLLKQTMLQKYGEENL 271
Query: 254 NEHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYW 300
E F + +T+C AT + Q A Y++ ++ D +V VEI + P+Y+
Sbjct: 272 KERFADTRDTLCYATNDNQSATYELTKQNADAAIVVGGYNSSNTSHLVEILSAK-FPTYF 330
Query: 301 IDSEKRIGPGNKIAY-KLMHGELVEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKVFE 358
I +I +I Y + + +N+LPK + I ITSGAS PD VE V++K+
Sbjct: 331 ISDPSKIISKEEILYFDIEQKKEATGKNFLPKDRPPVIAITSGASCPDSLVEAVIRKLLS 390
Query: 359 I 359
Sbjct: 391 F 391
>gi|294944831|ref|XP_002784452.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Perkinsus marinus ATCC 50983]
gi|239897486|gb|EER16248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Perkinsus marinus ATCC 50983]
Length = 429
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 167/265 (63%), Gaps = 45/265 (16%)
Query: 133 VWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGS 192
VW+SVE+HKKG+YTSIIHGK HEET+AT+SFA KY+I+KN+K+AEYVC ++L
Sbjct: 164 VWSSVERHKKGEYTSIIHGKSKHEETIATSSFADKYLILKNLKDAEYVCKFLL------- 216
Query: 193 SSTKEA----FLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRK 247
S KE F EKF S GFDP DL KVG+ANQTTMLKGET I KL EKT+++
Sbjct: 217 SKNKERLVNDFFEKFPADRHSVGFDPLKDLEKVGVANQTTMLKGETALIAKLFEKTVLQL 276
Query: 248 FGVENVNEHFISFNTICDATQERQDAMYKMVEE---KVDLILVV------------EIAE 292
+G E +NEHF++FNTICDATQ+RQDA+YK+V K+D++LVV EI+
Sbjct: 277 YGPEGLNEHFVAFNTICDATQDRQDALYKLVTPTATKLDMMLVVGGFNSSNTEHLQEISV 336
Query: 293 DRG----IPSYWIDSEKRIGP-GNKIAYKLM----------HGELVEKENWLPKG--QIT 335
+ G ++ ID RI N I +K + HG L ++LP IT
Sbjct: 337 EAGGVKDHRAFHIDGPARIDELRNTITHKPVETPPIEAARNHG-LAVTHDFLPGNGEHIT 395
Query: 336 IGITSGASTPDKAVEDVLKKVFEIK 360
IG+TSGASTPD +E L+K+ K
Sbjct: 396 IGVTSGASTPDDVLEQSLQKLLRTK 420
>gi|374586416|ref|ZP_09659508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptonema
illini DSM 21528]
gi|373875277|gb|EHQ07271.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptonema
illini DSM 21528]
Length = 434
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 204/354 (57%), Gaps = 29/354 (8%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++ K+A +GFC+GVE A++ AY A + ++I++ +E+IHNP VN+ L++ VQ +
Sbjct: 62 LRFKIARHFGFCYGVEHAIEKAYRAIDENEGKRIFLLSEMIHNPHVNEDLKQRGVQFLMK 121
Query: 85 EEGKKQFDVVN--KGDVVVLPAFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSVEKH 140
+G + + DVV++PAFG VE L ++ + Q DTTCP+V KVW +
Sbjct: 122 TDGTPLIPLTDLKPEDVVIIPAFGTTVEMFDLLQSRGIDTQTYDTTCPFVEKVWNRSSQL 181
Query: 141 KKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKE 197
+ YT IIHG++ HEET AT S A +++++M+EA + +YI + +
Sbjct: 182 GEKGYTVIIHGRFKHEETRATFSHALLNAPGMVIQDMEEAAVLAEYIC------NERPID 235
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
F + F S GF P+ DL ++G+ NQTTML ET I + ++ ++R+FG N+++HF
Sbjct: 236 RFFQDFPDRCSPGFRPEADLTRIGVVNQTTMLATETHAISEFLKSAIIRRFGDTNLSDHF 295
Query: 258 I-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSE 304
+ +T+C AT E Q A+ +M+ ++ DL L+ VE+ E++ +P+Y+I E
Sbjct: 296 ADTRDTLCYATSENQTALKEMLTDEGDLALIVGGYNSSNTSHLVELCEEK-MPTYYIKDE 354
Query: 305 KRIGPGNKIAY-KLMHGELVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKV 356
+ ++I + L G+ +W+P K +TI +++GAS PD V+ VL +
Sbjct: 355 FELISRDEIRHLDLKGGQAKISSSWMPAKESVTILLSAGASCPDALVDRVLNRT 408
>gi|327405912|ref|YP_004346750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fluviicola
taffensis DSM 16823]
gi|327321420|gb|AEA45912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fluviicola
taffensis DSM 16823]
Length = 414
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 204/363 (56%), Gaps = 30/363 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+GN ++ +A +GFC+GVE A++IAY A + ++I++ +++IHNPTVN+ L + ++
Sbjct: 50 FGNTQLYIARHFGFCYGVENAIEIAYRAVDENQGKRIFLLSQMIHNPTVNEDLTKHGIEF 109
Query: 82 IPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSV 137
I GK+ +D +N DVV++PAFG +E L ++ V +TTCP+V KVW
Sbjct: 110 IQDTAGKQLIPWDELNSNDVVIIPAFGTTLEIEQVLKDRGVSTEKYNTTCPFVEKVWNRA 169
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFAG---KYIIVKNMKEAEYVCDYILGGELNGSSS 194
EK ++T +IHGKY HEET AT S + +IVKNM+EA ++ I G +
Sbjct: 170 EKLGTENHTLVIHGKYDHEETRATFSHTALNSEAVIVKNMEEAGFLAKCITG------EA 223
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN 254
+KE F FK + F+P++ L K+G+ NQTTML ET+EI + +++ V+
Sbjct: 224 SKEEFYNFFKGKHTPSFNPEIHLSKIGVINQTTMLASETQEIAEFLKRVTEDFAQKTKVD 283
Query: 255 EHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
+ F + +T+C AT + Q A ++ E +D +V VE+ E + P+Y+I
Sbjct: 284 KTFADTRDTLCYATNDNQSATEALMNESLDFAIVVGGYNSSNTTHLVELLEQK-CPTYFI 342
Query: 302 DSEKRIGPGNKIAYKLMHGELVEK-ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
E I I +H +E ENW+ KG IGITSGAS PD ++ V+ K+ E+
Sbjct: 343 KDESEILTEKSIQSFNIHTHQLEAIENWI-KGS-KIGITSGASCPDSIIDSVISKIMELT 400
Query: 361 REE 363
E
Sbjct: 401 NSE 403
>gi|375143673|ref|YP_005006114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niastella
koreensis GR20-10]
gi|361057719|gb|AEV96710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niastella
koreensis GR20-10]
Length = 409
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 202/359 (56%), Gaps = 29/359 (8%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T G++ + LA +GFC+GVE A++I++ + P ++I++ +E+IHNP VN L+ VQ
Sbjct: 38 TLGSLHIYLARHFGFCYGVENAIEISFRTIESNPGKRIFLLSEMIHNPQVNSDLQSRGVQ 97
Query: 81 NIPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTS 136
+ G + F+ + DVV++PAFG +E L+N + + +TTCP+V KVW
Sbjct: 98 FLQDNYGHQLIPFEELTADDVVIIPAFGTTLEIEAKLSNLGIPVEKYNTTCPFVEKVWNR 157
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFAGK---YIIVKNMKEAEYVCDYILGGELNGSS 193
E+ + YT +IHGK HEET AT S A +IV +M+EAE + YI G
Sbjct: 158 SEQIAQKGYTIVIHGKPKHEETRATFSHAASNAPSVIVNDMQEAENLAKYITG------E 211
Query: 194 STKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--E 251
E F +F S GFD L ++G+ NQTT L +T+ I + +++T+ +G+ E
Sbjct: 212 KPAELFYTEFANRFSTGFDVTQHLQRIGVVNQTTQLATDTQAIAEFLKQTIQTHYGLTAE 271
Query: 252 NVNEHFI-SFNTICDATQERQDAMYKMVEEKVDLILVV---------EIAE--DRGIPSY 299
N+ F + +T+C AT + Q A+ M++ D+ +VV +AE ++ +P+Y
Sbjct: 272 NIETRFADTRDTLCYATNDNQTAVTGMLQTPADIAIVVGGYNSSNTTHLAELCEQELPTY 331
Query: 300 WIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKV 356
+I+SE+++ + + H E + ++LP GQ I ITSGAS PD VE V++KV
Sbjct: 332 FINSEEKLLSAKAVQHYNFHTKEELNTTDYLPTGQPARILITSGASCPDAVVESVIRKV 390
>gi|21435739|gb|AAM53956.1|AF514843_1 LYTB-like protein [Forsythia x intermedia]
Length = 130
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/130 (76%), Positives = 114/130 (87%), Gaps = 12/130 (9%)
Query: 224 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 283
NQTTMLKGETE+IGKLVE+ +MRK+GVEN+N HFISFNTICDATQERQDAMYK+V++ +D
Sbjct: 1 NQTTMLKGETEDIGKLVERILMRKYGVENINNHFISFNTICDATQERQDAMYKLVDQHMD 60
Query: 284 LILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 331
L+LVV EIAE RGIPSYWIDSEKRIGPGNKI+YKLMHGELVEKENWLP+
Sbjct: 61 LMLVVGGWNSSNTSHLQEIAEARGIPSYWIDSEKRIGPGNKISYKLMHGELVEKENWLPE 120
Query: 332 GQITIGITSG 341
G+ITIG+TSG
Sbjct: 121 GRITIGVTSG 130
>gi|284040182|ref|YP_003390112.1| hydroxymethylbutenyl pyrophosphate reductase [Spirosoma linguale
DSM 74]
gi|283819475|gb|ADB41313.1| hydroxymethylbutenyl pyrophosphate reductase [Spirosoma linguale
DSM 74]
Length = 412
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 215/391 (54%), Gaps = 46/391 (11%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S II LKE F T +G +++ +A +GFC+GVE AV+IAY+A +
Sbjct: 10 YRSSIITPLKEFRRKRDKLKRDFTPTLLDFGPIRLLIARHFGFCYGVENAVEIAYKAIAE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
P ++I++ +E+IHNP VN L+ V+ I +G + + + DVV++PAFG +E
Sbjct: 70 NPGKRIFLLSEMIHNPDVNADLQSRGVRFIMDTKGNQLIPWSELAPEDVVIIPAFGTTLE 129
Query: 111 EMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF---A 165
L+ + + DTTCP+V KVW + + DYT ++HGK SHEET AT S A
Sbjct: 130 TQHQLSALGLDVAKYDTTCPFVEKVWNKAGQIGQKDYTVVVHGKPSHEETRATFSHSKEA 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++V++M +A+ + YI GEL + F +F S GF+P+ DL ++G+ NQ
Sbjct: 190 APTVVVRDMAQAQRLAKYI-TGEL-----PVDEFYSEFAGQYSLGFEPERDLQRIGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAMYKMVEEKV 282
TTML +T+ I +++ M++K+ + HF + +T+C AT + QDA Y ++
Sbjct: 244 TTMLASDTQSIADYLKQVMVQKYALTPATTEAHFANTRDTLCYATNDNQDATYALLTYPA 303
Query: 283 DLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWL 329
D +V VE+ E + +P+Y+I+SE++I I + H E + EN++
Sbjct: 304 DFAIVAGGYNSSNTSHIVELCEQK-LPTYFIESEQKILSDKLIRHFNGHTKEEIVTENFI 362
Query: 330 PKGQ----ITIGITSGASTPDKAVEDVLKKV 356
P+ +T+ +T GAS PD VE +L K+
Sbjct: 363 PESSSANPVTVLLTCGASCPDAVVEGILLKL 393
>gi|256425573|ref|YP_003126226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chitinophaga
pinensis DSM 2588]
gi|256040481|gb|ACU64025.1| hydroxymethylbutenyl pyrophosphate reductase [Chitinophaga pinensis
DSM 2588]
Length = 408
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 210/367 (57%), Gaps = 33/367 (8%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G +K+ LA +GFC+GVE A++IA++ + P ++I++ +E+IHNP VN L E VQ
Sbjct: 39 FGPLKILLARHFGFCYGVENAIEIAFKTVEANPGKRIFLLSEMIHNPHVNNDLLEKGVQF 98
Query: 82 IPVEEGKK--QFDVVNKGDVVVLPAFGAAV---EEMVTLNNKNVQIVDTTCPWVSKVWTS 136
I G + ++ + D+V++PAFG + E++ +L +Q +TTCP+V +VW
Sbjct: 99 IMDTAGTQLVPWESLTPEDIVIIPAFGTTLEIEEKLSSLGIAPLQ-YNTTCPFVERVWNK 157
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSS 193
E+ K Y+ I+HGK HEET AT S + ++VK++KEA+ + +I G
Sbjct: 158 AEQIGKQSYSVIVHGKPGHEETRATFSHSRSNTPTVVVKDIKEAQLLATFITG------E 211
Query: 194 STKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE-- 251
E F FK S GFD DL +VG+ NQTTML ET+ I ++ +M ++ ++
Sbjct: 212 KNPEEFYILFKGQYSPGFDVINDLQRVGVVNQTTMLATETQAIADYIKNVIMDRYSLDAS 271
Query: 252 NVNEHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPS 298
NV+E F + +T+C AT + Q A+ ++EE DL +V VE+ E + +P+
Sbjct: 272 NVSERFADTRDTLCYATNDNQSAVTGLLEESADLAIVVGGYNSSNTSHLVELCEVK-LPT 330
Query: 299 YWIDSEKRIGPGNKIAY-KLMHGELVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKV 356
Y+I SE+++ ++ + H + + +LP K Q+TI +TSGAS PD VE V++++
Sbjct: 331 YFISSEEKLVNAEEVHHWDFHHKQELHSRAFLPEKEQVTIMLTSGASCPDAMVEAVIRRL 390
Query: 357 FEIKREE 363
+ E
Sbjct: 391 LSFYKLE 397
>gi|408672342|ref|YP_006872090.1| hydroxymethylbutenyl pyrophosphate reductase [Emticicia
oligotrophica DSM 17448]
gi|387853966|gb|AFK02063.1| hydroxymethylbutenyl pyrophosphate reductase [Emticicia
oligotrophica DSM 17448]
Length = 406
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 212/388 (54%), Gaps = 42/388 (10%)
Query: 5 YTSDIIKKLKE---------NGFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S+II K+KE F T +G +K +A +GFC+GVE AV+IAY+ ++
Sbjct: 10 YKSNIIGKIKEARRSKDKLKKDFTPTVLDFGTIKFLIARHFGFCYGVENAVEIAYKTIRE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFD--VVNKGDVVVLPAFGAAVE 110
P+++I+ +E+IHNP VN L V+ + +G + D + D VV+PAFG +E
Sbjct: 70 NPDKRIFFLSEMIHNPDVNADLLSQGVKFLMDTKGNQLIDWSELKPEDAVVVPAFGTTIE 129
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--- 165
L + + DTTCP+V KVW + + Y+ ++HGK HEET AT S +
Sbjct: 130 IQQQLTSLGIDPYKYDTTCPFVEKVWNRAGQIGERGYSIVVHGKPKHEETRATFSHSKQN 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
++V +MKEAE + YI EL KE F E F S+GFDP+ DL ++G+ NQ
Sbjct: 190 APTVVVNDMKEAEKLAKYI-TREL-----PKEQFYEDFAGQYSEGFDPEKDLDRIGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVE--NVNEHFI-SFNTICDATQERQDAMYKMVEEKV 282
TTML +T+ I +++ + + + V +F + +T+C AT + Q+A Y ++E +
Sbjct: 244 TTMLASDTQSIADFLKQVITKYHNAQPNEVERYFANTRDTLCYATNDNQEATYALLENQA 303
Query: 283 DLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 330
DL +V VE+ E++ +P+Y+I S + I N + +H + +++LP
Sbjct: 304 DLAVVVGGYNSSNTSHLVELCEEK-LPTYFIQSHESILDKNLVKRYNLHKKQEITDDFLP 362
Query: 331 -KGQITIGITSGASTPDKAVEDVLKKVF 357
K Q+T+ +T GAS PD +E VL K+
Sbjct: 363 EKPQLTVMLTCGASCPDAVMEAVLLKIL 390
>gi|358348285|ref|XP_003638178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Medicago
truncatula]
gi|355504113|gb|AES85316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Medicago
truncatula]
Length = 261
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 115/138 (83%)
Query: 43 VQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 102
VQIAYE +QFP KI ITNEIIHN VNK LEEM V+NIP+ EGKKQF+ VNKGDVV+L
Sbjct: 92 VQIAYEVIEQFPNHKIGITNEIIHNTIVNKCLEEMKVENIPIAEGKKQFEFVNKGDVVML 151
Query: 103 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 162
PAFGA V+EM+TL+ KNVQIVDTTC WVS VW VEKHK+ DYTSIIHGKY+ ++TVAT
Sbjct: 152 PAFGAVVDEMLTLSEKNVQIVDTTCEWVSTVWNIVEKHKREDYTSIIHGKYAQKKTVATM 211
Query: 163 SFAGKYIIVKNMKEAEYV 180
SFA KY+I+KNM +A+ +
Sbjct: 212 SFAEKYVIMKNMADAKMM 229
>gi|312131536|ref|YP_003998876.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leadbetterella
byssophila DSM 17132]
gi|311908082|gb|ADQ18523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leadbetterella
byssophila DSM 17132]
Length = 409
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 214/394 (54%), Gaps = 41/394 (10%)
Query: 5 YTSDIIKKLKEN---------GFEYT---WGNVKVKLAESYGFCWGVERAVQIAYEARKQ 52
Y S +I ++KE F+ T + V V +A +GFC+GVE AV+IAY ++
Sbjct: 10 YKSPVISRIKETRRAKDKLKRDFKPTVLEFEKVSVLIARHFGFCYGVENAVEIAYRTIQE 69
Query: 53 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVLPAFGAAVE 110
++++++ +E+IHNP VN L+ V+ + +G + F+ + D+V++PAFG +E
Sbjct: 70 HRDKRVFLLSEMIHNPDVNADLQAEGVKFLMDTQGNRLVDFNTLTPEDIVIVPAFGTTIE 129
Query: 111 EMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF---A 165
L+++ + DTTCP+V KVW + + YT ++HGK HEET AT S +
Sbjct: 130 IQKDLSDRGIDPYKYDTTCPFVEKVWNRANQIGERGYTVVVHGKPKHEETRATFSHSNAS 189
Query: 166 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 225
+++K+++EA + +I E F E+F S+GFDP+ L K+G+ NQ
Sbjct: 190 ANTVVIKDIQEARELAQFI------RKERPVEEFYERFAGRYSEGFDPEKHLEKLGVVNQ 243
Query: 226 TTMLKGETEEIGKLVEKTMMRKFGVENVN--EHFISF-NTICDATQERQDAMYKMVEEKV 282
TTML ET+EI +++ +++ +G++ V ++F S +T+C AT + QDA +++E+
Sbjct: 244 TTMLATETQEIANYLKEELVKYYGLDEVTLPQYFASTKDTLCYATNDNQDATLALLKEEA 303
Query: 283 DLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 330
DL +V VE+ E++ +P+Y+I S I +I + E V
Sbjct: 304 DLAIVVGGYNSSNTSHLVELLEEK-VPTYFIKSATGILSEREILHFHEGHEQVSVNFLGE 362
Query: 331 KGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
K I +T GAS PD VE+VL ++ E+ EE
Sbjct: 363 KAHTRIILTCGASCPDAVVEEVLVRLLELFGEEG 396
>gi|374374148|ref|ZP_09631807.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niabella soli
DSM 19437]
gi|373233590|gb|EHP53384.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niabella soli
DSM 19437]
Length = 409
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 203/363 (55%), Gaps = 39/363 (10%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V++ LA +GFC+GVE A++IA++ + P ++I++ +E+IHNP VN+ L V+
Sbjct: 39 FGAVQIYLARHFGFCYGVENAIEIAFKTVDENPGKRIFLLSEMIHNPQVNEDLLSRGVRF 98
Query: 82 IPVEEGKK--QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSV 137
+ GK+ F+ + + D+V++PAFG +E L ++ +TTCP+V KVW
Sbjct: 99 LQDTHGKQIIPFEDLTREDIVLIPAFGTTLEIEKKLKEIGIRTEQYNTTCPFVEKVWNRS 158
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFAGK---YIIVKNMKEAEYVCDYILGGELNGSSS 194
E K Y IIHGK SHEET AT S A ++V++M++ + YI G +
Sbjct: 159 ESIAKKAYAIIIHGKPSHEETRATFSHAASNAPSVVVRDMQQTIELAKYITGEKPAAD-- 216
Query: 195 TKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--EN 252
F +FK S+GFD + DL ++G+ NQTTML +T+ I +++ M+ K+ + E
Sbjct: 217 ----FYTEFKGQFSEGFDLEKDLSRIGVVNQTTMLASDTQAIADYLKQVMIEKYSLTKET 272
Query: 253 VNEHFI-SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSY 299
+ E F + +T+C AT + Q ++ +M+ D +V VE+ E++ +P+Y
Sbjct: 273 LAERFADTRDTLCYATNDNQTSVMEMLTTAADFAIVVGGYNSSNTSHLVELCEEK-LPTY 331
Query: 300 WIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG------QITIGITSGASTPDKAVEDVL 353
+I++ +I N+I +H + +K+ L G + I +TSGAS PD VE V+
Sbjct: 332 FINNAGKILNRNEI----LHYDFHKKQELLTNGFLPDHAPVKILMTSGASCPDALVEKVI 387
Query: 354 KKV 356
+K+
Sbjct: 388 EKI 390
>gi|254446398|ref|ZP_05059874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Verrucomicrobiae bacterium DG1235]
gi|198260706|gb|EDY85014.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Verrucomicrobiae bacterium DG1235]
Length = 543
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 204/374 (54%), Gaps = 44/374 (11%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ- 80
+G + L +GFC GV+ A++ AYE P +++++ +E+IHNP VN+ L+ ++
Sbjct: 155 FGATEYLLPSHFGFCLGVQNAIERAYETLAANPGKRVFMLSELIHNPFVNEDLQARGLKY 214
Query: 81 -----NIPVEE---GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWV 130
+P+ E G+ +D ++ D+V++PAFGA E+ + L + + I D TC V
Sbjct: 215 LQSDKGVPLIEEATGRPYWDGLSDADIVIIPAFGARDEDKLRLIERGLPIRQYDATCMLV 274
Query: 131 SKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY---IIVKNMKEAEYVCDYILGG 187
KVW + ++ + YT +IHGK HEET AT S + KY ++++++KEA ILG
Sbjct: 275 EKVWKAARRYGEQGYTIVIHGKAEHEETKATFSNSAKYAPSVVIRDIKEAS-----ILGE 329
Query: 188 ELNGSSST-KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 246
+ S K+ E F S GFDP DL ++ + NQTT+L+ ET +I +E+T+
Sbjct: 330 VIRAKSKEEKQRLFEPFVSRASVGFDPSKDLDRLALVNQTTLLRNETLKIIAYLEETLAE 389
Query: 247 KFGVENVNEHFI---SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIA 291
+G +V EH +T+C ATQ QDA+ K ++E +D +VV +
Sbjct: 390 TYGEAHVKEHLAMSSKGDTLCYATQVNQDALAKALDEDIDAAIVVGGKNSSNTFQLFRLC 449
Query: 292 EDR-GIPSYWIDSEKRIGPGNKIAYKLM---HGE----LVEKENWLP-KGQITIGITSGA 342
++R G +++I SE I ++I + + G+ ++E +LP K ++ + +T GA
Sbjct: 450 QERFGERAFYIQSEANILSRDEIEHFIFPYNPGDPKQGVMETRAFLPEKERVKVLVTGGA 509
Query: 343 STPDKAVEDVLKKV 356
S PD ++ ++ ++
Sbjct: 510 SCPDGILQQIICRI 523
>gi|294055616|ref|YP_003549274.1| hydroxymethylbutenyl pyrophosphate reductase [Coraliomargarita
akajimensis DSM 45221]
gi|293614949|gb|ADE55104.1| hydroxymethylbutenyl pyrophosphate reductase [Coraliomargarita
akajimensis DSM 45221]
Length = 574
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 54/383 (14%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ + +GFC GV+ A++ AYEA P ++++ +E+IHNP VN+ L ++
Sbjct: 175 FGPVRYVIPSHFGFCLGVQNAIERAYEAVASNPGRRVFMLSELIHNPFVNEDLLARGLRY 234
Query: 82 IPVEEG----------------KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV-- 123
+ ++G + ++ + D+V++PAFGA E+ L + I
Sbjct: 235 LQTDKGLPLRSDGQIAASAADPEALWNQLTSDDIVIIPAFGATNEDKARLIKAGLSIRAH 294
Query: 124 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT---ASFAGKYIIVKNMKEAEYV 180
D TC V KVW + ++ + +T +IHGK HEET AT +S G ++++NM A +
Sbjct: 295 DATCMLVEKVWKAARRYAQEGFTVLIHGKAEHEETKATFSNSSSHGPALMIRNMDHARAL 354
Query: 181 CDYILGGELNGSSSTKEA--FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 238
+ E TK+A F + F S+GFDP DL K+ + NQTT+L+ ET +I +
Sbjct: 355 AAVMRSPE------TKKAKLFEDAFAGLYSEGFDPARDLEKIAVVNQTTLLRNETLKIIE 408
Query: 239 LVEKTMMRKFGVENVNEHFIS---FNTICDATQERQDAMYKMVEEKVDLILVV------- 288
+ + +G + V H S +T+C ATQ QDA++K VEE+VD+ LVV
Sbjct: 409 YLRSVIAEVYGNDAVEAHLWSKGKGDTLCYATQVNQDALHKAVEEQVDIALVVGGRNSSN 468
Query: 289 -----EIAEDR-GIPSYWIDSEKRIGPGNKIA-YKLMHGELVEKE------NWLPK--GQ 333
+ E + G +++I SE I +I Y G + + E +++P+
Sbjct: 469 TYQLYRVCESQFGERAHYIQSEANILSKEQIRHYIFTPGHVPQPEQNEVERSFIPEQTSA 528
Query: 334 ITIGITSGASTPDKAVEDVLKKV 356
+TI +T GAS PD ++ V+ K+
Sbjct: 529 VTILLTGGASCPDGIIQQVIHKI 551
>gi|50540728|gb|AAT77884.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108710911|gb|ABF98706.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 333
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 104/135 (77%), Gaps = 2/135 (1%)
Query: 1 MNQEYTSDIIKKLKENGFEYTW--GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKI 58
+N EYTS++I +++ NG EY G V++ LAE++GFC GV+ AV++AY+AR +FP+ ++
Sbjct: 97 INLEYTSELISEMERNGGEYVTMDGLVRLILAEAHGFCLGVDNAVRLAYDARVKFPDRRL 156
Query: 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 118
W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PAFG V+EMVTLN K
Sbjct: 157 WLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPAFGFTVDEMVTLNRK 216
Query: 119 NVQIVDTTCPWVSKV 133
NV IVDTTCP V K+
Sbjct: 217 NVHIVDTTCPLVLKL 231
>gi|397567899|gb|EJK45844.1| hypothetical protein THAOC_35516 [Thalassiosira oceanica]
Length = 247
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 138/232 (59%), Gaps = 34/232 (14%)
Query: 159 VATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 218
+AT S YI VKN EA+YV D+IL + G K+AF+EKF KA S FDP L
Sbjct: 1 MATKSMCETYICVKNEDEAKYVADFILSAD-EGDEDAKKAFMEKFGKACSSHFDPHKHLK 59
Query: 219 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 278
K+G+ANQTTM K ET IG+L++KTMM K+G + +N+H+ F+TICDATQ RQDA+ ++
Sbjct: 60 KIGLANQTTMYKKETRAIGQLLQKTMMSKYGPDLINDHYYEFDTICDATQVRQDAVDELC 119
Query: 279 -------EEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ +D ILVV EI + RG+ SY I++ + I N I ++L++
Sbjct: 120 NMHDDPSKPDLDFILVVGGFDSSNTAHLLEIPQMRGVRSYHINTAECISGENTIKHRLVN 179
Query: 320 GELVEKENWL---------PKGQIT-----IGITSGASTPDKAVEDVLKKVF 357
G++V+ L KG+ T +G+TSGASTPDK V+D L ++
Sbjct: 180 GDVVDSAPLLEDEMLWETNEKGEKTKKLLRVGVTSGASTPDKEVQDALGRIM 231
>gi|385047503|gb|AFI39656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Hordeum chilense]
Length = 101
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 83/101 (82%), Gaps = 12/101 (11%)
Query: 221 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 280
GIANQTTMLKGETEEIGKLVEKTMMRK+GVEN NEHF++FNTICDATQERQDAMY +V+E
Sbjct: 1 GIANQTTMLKGETEEIGKLVEKTMMRKYGVENANEHFVAFNTICDATQERQDAMYHLVKE 60
Query: 281 KVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
KVDLILV+ EI E GIPSYWIDSE+RI P
Sbjct: 61 KVDLILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIDP 101
>gi|385047505|gb|AFI39657.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Hordeum chilense]
Length = 101
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 83/101 (82%), Gaps = 12/101 (11%)
Query: 221 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 280
GIANQTTMLKGETEEIGKLVEKTMMRK+GVEN NEHF++FNTICDATQERQDAMY +V+E
Sbjct: 1 GIANQTTMLKGETEEIGKLVEKTMMRKYGVENANEHFVAFNTICDATQERQDAMYHLVKE 60
Query: 281 KVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
KVDLILV+ EI E GIPSYWIDSE+RI P
Sbjct: 61 KVDLILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIEP 101
>gi|377648360|gb|AFB70984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Mitragyna speciosa]
Length = 96
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/80 (87%), Positives = 77/80 (96%)
Query: 289 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 348
EIAEDRGIPSYWIDSE+RIGPGN+IAYKL+HGELVEKENWLP+G ITIG+TSGASTPDK
Sbjct: 17 EIAEDRGIPSYWIDSEQRIGPGNRIAYKLLHGELVEKENWLPEGPITIGVTSGASTPDKV 76
Query: 349 VEDVLKKVFEIKREEALQLA 368
VEDVL KVF++KREEALQLA
Sbjct: 77 VEDVLVKVFDLKREEALQLA 96
>gi|388501498|gb|AFK38815.1| unknown [Lotus japonicus]
Length = 107
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 87/107 (81%), Gaps = 12/107 (11%)
Query: 274 MYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
MYK+ E +DL+LVV EIAE+R IPSYWID+E+RIGPGN+IAYKLMHGE
Sbjct: 1 MYKLGERDMDLMLVVGGWNSSNTSHLQEIAEERRIPSYWIDTEQRIGPGNRIAYKLMHGE 60
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
LVEKEN+LP+G ITIGITSGASTPDK VEDVL KVF++KREE LQLA
Sbjct: 61 LVEKENFLPQGPITIGITSGASTPDKVVEDVLIKVFDLKREEVLQLA 107
>gi|397567900|gb|EJK45845.1| hypothetical protein THAOC_35517 [Thalassiosira oceanica]
Length = 235
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
Query: 1 MNQEYTSDIIKKLKEN-GFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
M ++ S ++ ++K++ ++ V LA+ +GFCWGVER++ +AY A + FP++ I
Sbjct: 84 MRDQFDSSLMNEMKDDPNYQLEKDGVMFYLAKDHGFCWGVERSINLAYSAVESFPDQDIH 143
Query: 60 ITNEIIHNPTVNKRLEEMAVQNIPV--EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 117
ITNE+IHNP VN+RL V I E+G K F + +GDVV+LPAFGA ++EM L++
Sbjct: 144 ITNELIHNPMVNERLHNKNVNFIEKYEEDGTKDFSKIKEGDVVMLPAFGATLDEMKELDS 203
Query: 118 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTS 147
K V+IVDTTCPWV+KVW +V H+ TS
Sbjct: 204 KGVKIVDTTCPWVAKVWATVHTHQVRGLTS 233
>gi|391232823|ref|ZP_10269029.1| penicillin tolerance protein [Opitutaceae bacterium TAV1]
gi|391222484|gb|EIQ00905.1| penicillin tolerance protein [Opitutaceae bacterium TAV1]
Length = 618
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 186/418 (44%), Gaps = 78/418 (18%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+G V+ + +GFC GV+ A++ AYE P ++++ +E+IHNP VN+ L ++
Sbjct: 177 FGAVRYLVPSHFGFCLGVKNAIERAYETLAANPGRRVFMLSELIHNPFVNEDLLRRGLRY 236
Query: 82 IPVEEGKK---------------------------------QFDVVNKGDVVVLPAFGAA 108
+ ++G +D + D+V++PAFGA
Sbjct: 237 LQTDKGTPFTTDGRKASAALPPSPPLSLSLSADSAAPATPLLWDTLTPDDIVIIPAFGAT 296
Query: 109 VEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 166
++ L K + + D TC V KVW + + + YT IIHGK+ HEET AT +
Sbjct: 297 DDDKRRLIRKGIALGESDATCMLVEKVWKAARSYGRDGYTIIIHGKHEHEETKATFANTR 356
Query: 167 KY---IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 223
++ +IV+++ E + + I + + + F EKF ++ FD L +V +
Sbjct: 357 RHAPAVIVRDLAETRLLGEIIASRD----PAFRATFYEKFAGKHTEDFDVARHLDRVAVV 412
Query: 224 NQTTMLKGETEEIGKLVEKTMMRKFG------VENVNEHFISFNTICDATQERQDAMYKM 277
NQTT+L ET EI + FG + V + +T+C ATQ QDA+ +
Sbjct: 413 NQTTLLVNETREIIAWLRDLYAATFGPDIPGALPRVGRGGRT-DTLCYATQVNQDALGRA 471
Query: 278 VEEKVDLILVV------------EIAEDR-GIPSYWIDSEKRIGPGNKIAYKLMHGEL-- 322
+++ +D +V+ + E + G +++I SE+ I ++ + +
Sbjct: 472 LQKPLDAAIVIGGKNSSNTWQLYRLCEQQLGPRAFFIQSERDIRSLAEVEHTVFATHQGA 531
Query: 323 -----VEKENWLPKG---------QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
E + LP G + + +T GAS PD ++ V+ ++ AL+
Sbjct: 532 NPAGGTEIRSLLPAGVPPHPSPGHPLRVLVTGGASCPDGLIQQVITRINSFMPPGALR 589
>gi|294937386|ref|XP_002782059.1| hydroxymethylbutenyl 4-diphosphate reductase, putative [Perkinsus
marinus ATCC 50983]
gi|239893356|gb|EER13854.1| hydroxymethylbutenyl 4-diphosphate reductase, putative [Perkinsus
marinus ATCC 50983]
Length = 87
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 83 PVEEG-KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
P + G +K F VV+ GDVV+LPAFGAAV+EM+ L K V IVDTTCPWVSKVW+SVE+HK
Sbjct: 2 PRDAGNQKDFSVVSAGDVVILPAFGAAVKEMMELKRKGVTIVDTTCPWVSKVWSSVERHK 61
Query: 142 KGDYTSIIHGKYSHEETVATASFAGK 167
KG+YTSIIHGK HEET+AT+SFA K
Sbjct: 62 KGEYTSIIHGKSKHEETIATSSFADK 87
>gi|33772203|gb|AAQ54537.1| LYTB-like protein [Malus x domestica]
Length = 71
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 65/71 (91%)
Query: 298 SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVF 357
SYWIDSEKRIGPGN+IAYKL HGELVEKENWLP+G +TIG+TSGASTPDK VED L ++F
Sbjct: 1 SYWIDSEKRIGPGNRIAYKLNHGELVEKENWLPEGPVTIGVTSGASTPDKVVEDTLIRLF 60
Query: 358 EIKREEALQLA 368
++KREE LQLA
Sbjct: 61 DLKREEVLQLA 71
>gi|383128251|gb|AFG44784.1| hypothetical protein CL3614Contig1_03, partial [Pinus taeda]
Length = 74
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 64/74 (86%)
Query: 290 IAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAV 349
IAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G + IGITSGASTPDK +
Sbjct: 1 IAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTGPLKIGITSGASTPDKIL 60
Query: 350 EDVLKKVFEIKREE 363
ED LK VF++K EE
Sbjct: 61 EDTLKVVFKMKDEE 74
>gi|20807799|ref|NP_622970.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter tengcongensis MB4]
gi|24211879|sp|Q8RA76.1|ISPH_THETN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|20516356|gb|AAM24574.1| Penicillin tolerance protein [Thermoanaerobacter tengcongensis MB4]
Length = 288
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 174/341 (51%), Gaps = 58/341 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ +AE GFC+GV+RA++IAYE + + +++ EIIHNP V K LEE V+ I
Sbjct: 1 MEILIAEHAGFCFGVKRAIEIAYEELNKQKDTRLYTLGEIIHNPQVVKDLEEKGVRVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE +K KGD +++ + G + + L K V+I+D TCP+V KV VE++ K
Sbjct: 61 EELEKL----LKGDRLIIRSHGISKKLYEFLEQKGVEIIDVTCPFVKKVQNIVEEYYKKG 116
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G +H E + + K IV +++EAE L F
Sbjct: 117 YDIVIVGDKNHPEVIGVNGWCEDKAYIVNSVEEAEN--------------------LPFF 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + +QTT+++ E+I ++++ + + FNTI
Sbjct: 157 EKACA--------------VSQTTLIEKHWEDILEVLKSKA----------KELVYFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
C+ATQ+RQ+A + +KVD++ V+ G S ++I N K Y + +
Sbjct: 193 CNATQKRQEAA-DALSKKVDVMFVI-----GGKHSSNTQKLRKICEKNCKNTYHIERADE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ E + KG IGIT+GASTPD +E+V++K+ +K E+
Sbjct: 247 ITFE--MLKGHDIIGITAGASTPDYVIEEVIEKIKSLKGED 285
>gi|167037581|ref|YP_001665159.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040243|ref|YP_001663228.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter sp. X514]
gi|300914327|ref|ZP_07131643.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X561]
gi|307724437|ref|YP_003904188.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X513]
gi|320115996|ref|YP_004186155.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|238687561|sp|B0K197.1|ISPH_THEPX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|238687698|sp|B0K9L0.1|ISPH_THEP3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166854483|gb|ABY92892.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X514]
gi|166856415|gb|ABY94823.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889262|gb|EFK84408.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X561]
gi|307581498|gb|ADN54897.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X513]
gi|319929087|gb|ADV79772.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 288
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 169/342 (49%), Gaps = 58/342 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K V+++D TCP+V KV V ++
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + + V N S +EA+ L +
Sbjct: 117 YSIIIVGDRNHPEVIGVNGWCDDTAYVVN--------------------SIEEAYELPQL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT+++ ++I +++ K V++ I FNTI
Sbjct: 157 EKACA--------------VAQTTLIEKHWKDILEVI------KLKVKD----LIFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
CDATQ+RQDA ++ +KVD++ V+ G S K+I N K + + E
Sbjct: 193 CDATQKRQDAADEL-SKKVDVMFVI-----GGKHSSNTQKLKKICEKNCKNTFHIEDAEE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
+ E + K IG+T+GASTPD +EDV+KK+ +K E+
Sbjct: 247 LTLE--MVKDHEIIGVTAGASTPDYVIEDVIKKIRFLKGEDG 286
>gi|345017661|ref|YP_004820014.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344033004|gb|AEM78730.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 288
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 58/342 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K V+++D TCP+V KV V ++
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + + V N S +EA+ L +
Sbjct: 117 YSIIIVGDRNHPEVIGVNGWCDDTAYVVN--------------------SIEEAYELPQL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT+++ ++I +++ K V++ I FNTI
Sbjct: 157 EKACA--------------VAQTTLIEKHWKDILEVI------KLKVKD----LIFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRI-GPGNKIAYKLMHGEL 322
CDATQ+RQDA ++ +KVD++ V+ G S K+I G K + + E
Sbjct: 193 CDATQKRQDAADEL-SKKVDVMFVI-----GGKHSSNTQKLKKICGKNCKNTFHIEDAEE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
+ E + K IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 247 LTLE--MVKDHEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|392940994|ref|ZP_10306638.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Thermoanaerobacter siderophilus
SR4]
gi|392292744|gb|EIW01188.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Thermoanaerobacter siderophilus
SR4]
Length = 288
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 58/342 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K V+++D TCP+V KV V ++
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + + V N S +EA+ L +
Sbjct: 117 YSIIIVGDRNHPEVIGVNGWCDDTAYVVN--------------------SIEEAYELPQL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT+++ ++I +++ K V++ I FNTI
Sbjct: 157 EKACA--------------VAQTTLIEKHWKDILEVI------KLKVKD----LIFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
CDATQ+RQDA ++ +KVD++ V+ G S K+I N K + + E
Sbjct: 193 CDATQKRQDAADEL-SKKVDVMFVI-----GGKHSSNTQKLKKICEKNCKNTFHIEDAEE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
+ E + K IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 247 LTLE--MVKDHEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|326391104|ref|ZP_08212651.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
ethanolicus JW 200]
gi|325992889|gb|EGD51334.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
ethanolicus JW 200]
Length = 288
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 169/342 (49%), Gaps = 58/342 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K V+++D TCP+V K+ V ++
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKIQNIVYEYYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + + V N S +EA+ L +
Sbjct: 117 YSIIIVGDRNHPEVIGVNGWCDDTAYVVN--------------------SIEEAYELPQL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT+++ ++I +++ K V++ I FNTI
Sbjct: 157 EKACA--------------VAQTTLIEKHWKDILEVI------KLKVKD----LIFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
CDATQ+RQDA ++ +KVD++ V+ G S K+I N K + + E
Sbjct: 193 CDATQKRQDAADEL-SKKVDVMFVI-----GGKHSSNTQKLKKICEKNCKNTFHIEDAEE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
+ E + K IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 247 LTLE--MVKDHEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|326533892|dbj|BAJ93719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 69
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 301 IDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
IDSE+RIGPGN+IAYKL HGEL+E ENWLP+G ITIG+TSGASTPDK VED L KVFEIK
Sbjct: 2 IDSEQRIGPGNRIAYKLNHGELIEAENWLPEGPITIGVTSGASTPDKVVEDTLHKVFEIK 61
Query: 361 REEALQLA 368
R+E LQ+A
Sbjct: 62 RQEVLQVA 69
>gi|390559202|ref|ZP_10243560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrolancetus
hollandicus Lb]
gi|390174221|emb|CCF82853.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrolancetus
hollandicus Lb]
Length = 318
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 154/348 (44%), Gaps = 70/348 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE G+CWGV RA+ I +A + ++IHNP V +RL+ V E
Sbjct: 5 QIILAEEMGYCWGVRRALDIISKAGNT--ANPVATIGDVIHNPQVVQRLKAQGV-----E 57
Query: 86 EGKKQFDVVNKG-DVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V++G V + A GA E + + +++VDTTCP V+KV EK +
Sbjct: 58 TADSLDDAVSRGFSRVAITAHGAGPERTESAKQRGLEMVDTTCPLVTKVQRLGEKLVRQG 117
Query: 145 YTSIIHGKYSHEETVATASFAG--KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y +++G H E ++AG + + K++++ + GE
Sbjct: 118 YFLVVYGDSYHPEVRGIIAWAGTSRAVAAKHIEDLPWNAPRGANGE-------------- 163
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
D KVGI +QTT K E + + E T M V NT
Sbjct: 164 ---------DTIAPPRKVGIVSQTT--KNVDEFLAFVTELTAM----VAREGGEIRVCNT 208
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+ T ERQ+A+ ++ + VDLIL + E+ G+PSY I+SE I
Sbjct: 209 ICEPTSERQNALRRLATQ-VDLILAIGGKKSSNTARLAEVGRSYGVPSYHIESEAEI--- 264
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ WL K +G+T+GASTPD +E V++ + E
Sbjct: 265 --------------QDEWL-KIVGNVGVTAGASTPDDVIESVVRHLQE 297
>gi|333897069|ref|YP_004470943.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112334|gb|AEF17271.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 161/340 (47%), Gaps = 58/340 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC+GV+RAV++AY+ + K + E+IHNP V K LE+ ++ I
Sbjct: 1 MKILIADNAGFCFGVKRAVRMAYDQVNNSDDSKTYAYGELIHNPQVVKDLEDKGIKTI-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D +++ +++ G + L NK V+I+D TCP+V +V V + K
Sbjct: 59 ----EHIDELDENSKILIRTHGIPKKIYEELKNKKVEIIDMTCPFVKRVQKIVNGYYKKG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y+ +I G +H E + +NG + ++
Sbjct: 115 YSIVIIGDRNHPEVIG----------------------------VNGWCNNSAYVIQSTD 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
S F L K + QTT+ + E+I L+ + + IS+NTIC
Sbjct: 147 DVNSLPF-----LDKTCVVAQTTITQKMWEDILDLLHLKV----------KELISYNTIC 191
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
DAT +RQ + K+ +E VD+++V+ G S K+I N K + E +
Sbjct: 192 DATNKRQSSAEKISKE-VDMMIVI-----GGKNSSNTQKLKKICEKN--CDKTIQVESAD 243
Query: 325 KENWLPKGQI-TIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ + + + T+GIT+GASTPD +++V+ K+ ++EE
Sbjct: 244 EIDLITLKDVETVGITAGASTPDYLIQEVIDKITSGRKEE 283
>gi|297544625|ref|YP_003676927.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842400|gb|ADH60916.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 288
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 58/341 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY ++ KI++ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYYEIEKNSGRKIYMLGEIIHNPQVISDLSKKGVNIIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K ++++D TCP+V KV V +H
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGIEVIDVTCPFVKKVQDIVYEHYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + V N S +EA L K
Sbjct: 117 YSIIIVGDRNHPEVRGVNGWCDDTAYVVN--------------------SIEEAHKLPKL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT++ E+I +++ K V++ + FNTI
Sbjct: 157 EKACA--------------VAQTTLIGRYWEDILEVI------KLKVKD----LVFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
CDATQ+RQ + ++ +KVD++ V+ G S K+I N K + + +
Sbjct: 193 CDATQKRQGSAEQL-SKKVDVMFVI-----GGKHSSNTQKLKKICEKNCKNTFHIEDAKE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ E + K + IGIT+GASTPD +E+V+KK+ +K E+
Sbjct: 247 LTLE--MVKDREIIGITAGASTPDYVIEEVIKKIRFLKGEK 285
>gi|269836363|ref|YP_003318591.1| hydroxymethylbutenyl pyrophosphate reductase [Sphaerobacter
thermophilus DSM 20745]
gi|269785626|gb|ACZ37769.1| hydroxymethylbutenyl pyrophosphate reductase [Sphaerobacter
thermophilus DSM 20745]
Length = 317
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 145/344 (42%), Gaps = 72/344 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ +AE G+CWGV RA++I EA P + ++IHNP V +RL+ V
Sbjct: 4 RIVMAEELGYCWGVRRALEIITEAGD--PNNPVATIGDVIHNPQVVQRLKARGVDTAESV 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E Q V + A GA E ++++DTTCP V+KV +K + Y
Sbjct: 62 EEAAQRGFRR----VAITAHGAGPERARLAAEHGLELIDTTCPLVTKVQRLGQKLVRQGY 117
Query: 146 TSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+++G H E ++A + + K++++ +
Sbjct: 118 FLVVYGDSFHPEVRGVLAWAETSRAVAAKHIEDLPW------------------------ 153
Query: 204 KKAVSKGFDPD--VDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
A DPD V KV + +QTT E E + + R G V N
Sbjct: 154 -NAPRGSTDPDAKVPPRKVAVVSQTTKNVDEFMEFVTQLTSMVARDGGEIRV------CN 206
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC+ T ERQ+A+ ++ E VDLIL + E+ G+PSY I+SE I P
Sbjct: 207 TICEPTSERQNALRRLAGE-VDLILAIGGKKSSNTARLAEVGRSYGVPSYHIESEAEIEP 265
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL G +G+T+GASTPD +E V+
Sbjct: 266 A-----------------WL-DGVEVVGVTAGASTPDDVIEGVV 291
>gi|253699628|ref|YP_003020817.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M21]
gi|259493946|sp|C6E2B3.1|ISPH_GEOSM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|251774478|gb|ACT17059.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M21]
Length = 283
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 72/346 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC+GV+RA Q+A+EA E + IIH+P V +RLEEM V IPV
Sbjct: 1 MQVILAKHAGFCFGVKRATQLAFEAADTGSE--TYTLGPIIHSPQVVQRLEEMGV--IPV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + V G +++ + G A EE+ N+++VD TCP+V K V K
Sbjct: 57 EDVSE----VETGGTIIIRSHGVAAEELEAAVRANLEVVDATCPFVKKAQEHVATLSKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G H E S+A G+ +V + K+ +E+
Sbjct: 113 YDIVVVGDAVHPEVQGIVSYAAGRVYVVSSDKD-----------------------VERL 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ + K+GI QTT E + +V + R G V +NTI
Sbjct: 150 PR-----------MSKIGIVAQTTQ---SFEHLHDVVTACLARG-GETRV------YNTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM----H 319
CDAT RQD K+ VD ++V I + + KR+ +I +L+ H
Sbjct: 189 CDATAVRQDEAKKLAG-AVDCMVV--------IGGFNSANTKRLA---QICRELLPRTHH 236
Query: 320 GELVEK--ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
E + E W KG +G+T+GASTP +++V+ ++ I +++
Sbjct: 237 VETACQIDEQWF-KGVEKVGVTAGASTPKWIIDEVIDRISAIDKDK 281
>gi|289578347|ref|YP_003476974.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
italicus Ab9]
gi|289528060|gb|ADD02412.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
italicus Ab9]
Length = 288
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 164/341 (48%), Gaps = 58/341 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GV+RA++ AY ++ KI++ EIIHNP V L + V I
Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYYEIEKNSGRKIYMLGEIIHNPQVISDLSKKGVNVIEE 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D + +GD +++ + G + + L K ++++D TCP+V KV V +H
Sbjct: 61 EE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGIEVIDVTCPFVKKVQDIVYEHYHKG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKF 203
Y+ II G +H E + V N S +EA L K
Sbjct: 117 YSIIIVGDRNHPEVRGVNGWCDDTAYVVN--------------------SIEEAHKLPKL 156
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+KA + QTT++ ++I +++ K V++ + FNTI
Sbjct: 157 EKACA--------------VAQTTLIGRYWKDILEVI------KLKVKD----LVFFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGEL 322
CDATQ+RQ + ++ +KVD++ V+ G S K+I N K + + +
Sbjct: 193 CDATQKRQGSAEQL-SKKVDVMFVI-----GGKHSSNTQKLKKICEKNCKNTFHIEDAKE 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ E + K + IGIT+GASTPD +E+V KK+ +K E+
Sbjct: 247 LTLE--MVKDREIIGITAGASTPDYVIEEVTKKIRFLKGEK 285
>gi|313672061|ref|YP_004050172.1| hydroxymethylbutenyl pyrophosphate reductase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938817|gb|ADR18009.1| hydroxymethylbutenyl pyrophosphate reductase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 282
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 68/335 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ +A+ GFC+GVERAV+I A ++ + ++ IIHNP + + E+ Q + V
Sbjct: 1 MEIYVAQHAGFCFGVERAVKIVRNAAGEY--KNLYTLGPIIHNPQL---VNELKSQGVDV 55
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D +++G VVL + G +E+ L KN+ IVD TCP+V+K + K
Sbjct: 56 AEST---DDLSEGSTVVLRSHGVEKQELNILAKKNIHIVDATCPYVNKAHSEAVNLSKDG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G+ H E AS+ G+Y IV SS +EA+ F
Sbjct: 113 YFVVIFGEKDHPEVKGIASYIEGEYTIV---------------------SSPEEAYNIDF 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
++ K+G+ QTT K ++I ++ + R+ + N TI
Sbjct: 152 RE-------------KIGVVAQTTQEKAVFDKIVDIL-RNRCRELKISN---------TI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C+AT RQ+A K V E V+++ VV A R + Y I SE I K H
Sbjct: 189 CNATTLRQNAARK-VAEMVEVMFVVGGKNSANTRRL--YKICSE--------ICEKTFHI 237
Query: 321 ELVEK-ENWLPKGQITIGITSGASTPDKAVEDVLK 354
E E+ + + G +G+T+GASTP ++DV++
Sbjct: 238 ETKEEIDKSVLIGVNKVGVTAGASTPKNIIDDVIE 272
>gi|153954192|ref|YP_001394957.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
kluyveri DSM 555]
gi|146347073|gb|EDK33609.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-related protein
[Clostridium kluyveri DSM 555]
Length = 637
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 59/337 (17%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC+GVERAV A AR++F ++KI+ +IHN V L++ + I +++
Sbjct: 5 LADKSGFCFGVERAVTEAISAREKF-KKKIYTLGPLIHNSDVVNNLKKKGIYPIELDD-- 61
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ + DVVV+ + G A + + L NK + +V+ TCP+VS + VEK+ K Y+ +
Sbjct: 62 --ICSLKEDDVVVIRSHGVAKDILTLLENKKINVVNATCPYVSNIQKKVEKYYKLGYSIL 119
Query: 149 IHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
I G +H E V + II KN
Sbjct: 120 IVGDINHPEVVGINGWCENTGIISKN---------------------------------- 145
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
G D D +K+ I +QTT + E++ +V K FI+FNTIC AT
Sbjct: 146 --GVDLDKLPLKICIVSQTTEKQSNWEKVLNIVAKEC----------REFIAFNTICSAT 193
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
+ RQ A + + +KVD+++V+ + E N + GE+ +N
Sbjct: 194 EFRQKAA-ECISKKVDMMVVIGGKNSSNTTKLY---EICKSNCNNTIHVENSGEI--PDN 247
Query: 328 WLPKGQI-TIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ +I TIG+T+GASTP+ +++ + K+ + K E
Sbjct: 248 IIKTNKIKTIGVTAGASTPNWIIKEAVLKMSDDKNLE 284
>gi|225849646|ref|YP_002729880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Persephonella
marina EX-H1]
gi|225645910|gb|ACO04096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Persephonella
marina EX-H1]
Length = 284
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 156/337 (46%), Gaps = 62/337 (18%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+K+AES GFC+GV+ AV A EA K+F K + IIHN V + LE + V+ +
Sbjct: 4 IKVAESAGFCFGVKIAVDSAVEAGKKFG--KAFTNGPIIHNKQVVQFLEGLNVKEL---- 57
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
K +D + +GD +++ + G + LN V ++D TCP+V KV V++ + Y
Sbjct: 58 --KSYDQLKRGDTILIRSHGVPPKTERMLNQLGVNVIDATCPFVKKVHEKVKQLVEEGYY 115
Query: 147 SIIHGKYSHEETVATASF----AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+I G+ H E + GK I+V+NM E + K
Sbjct: 116 VVIIGEEGHPEVIGILGHLEEAGGKGIVVENM----------------------EDLIRK 153
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
F + KVG+ QTT + EE + + E FNT
Sbjct: 154 FPRR-----------NKVGVVAQTTQNEEFFEEAVGYIASNV----------EELKVFNT 192
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
ICDAT RQ+ + ++ +E VD+++++ + G K + P Y + +
Sbjct: 193 ICDATSVRQEEVKRLAKE-VDVMIIIG-GKHSGNTRRLAQISKALNPN---TYHVEKADE 247
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
++ E W + IG+++GASTPD +++V++++ EI
Sbjct: 248 LDSE-WFKNAE-NIGVSAGASTPDWIIKEVVERIREI 282
>gi|219854800|ref|YP_002471922.1| hypothetical protein CKR_1457 [Clostridium kluyveri NBRC 12016]
gi|219568524|dbj|BAH06508.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 640
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 59/337 (17%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC+GVERAV A AR++F ++KI+ +IHN V L++ + I +++
Sbjct: 8 LADKSGFCFGVERAVTEAISAREKF-KKKIYTLGPLIHNSDVVNNLKKKGIYPIELDD-- 64
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ + DVVV+ + G A + + L NK + +V+ TCP+VS + VEK+ K Y+ +
Sbjct: 65 --ICSLKEDDVVVIRSHGVAKDILTLLENKKINVVNATCPYVSNIQKKVEKYYKLGYSIL 122
Query: 149 IHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
I G +H E V + II KN
Sbjct: 123 IVGDINHPEVVGINGWCENTGIISKN---------------------------------- 148
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
G D D +K+ I +QTT + E++ +V K FI+FNTIC AT
Sbjct: 149 --GVDLDKLPLKICIVSQTTEKQSNWEKVLNIVAKEC----------REFIAFNTICSAT 196
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
+ RQ A + + +KVD+++V+ + E N + GE+ +N
Sbjct: 197 EFRQKAA-ECISKKVDMMVVIGGKNSSNTTKLY---EICKSNCNNTIHVENSGEI--PDN 250
Query: 328 WLPKGQI-TIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ +I TIG+T+GASTP+ +++ + K+ + K E
Sbjct: 251 IIKTNKIKTIGVTAGASTPNWIIKEAVLKMSDDKNLE 287
>gi|118579777|ref|YP_901027.1| hydroxymethylbutenyl pyrophosphate reductase [Pelobacter
propionicus DSM 2379]
gi|166217472|sp|A1ANP9.1|ISPH_PELPD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|118502487|gb|ABK98969.1| hydroxymethylbutenyl pyrophosphate reductase [Pelobacter
propionicus DSM 2379]
Length = 280
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 83/350 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC+GV+RA Q+A+EA ++K + IIH+P V K+LEEM V+ +
Sbjct: 1 MRVILAKRAGFCFGVKRATQMAFEAAGM--DKKTYTLGPIIHSPQVVKKLEEMGVRAL-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K D ++ G +++ + G A E+ K ++IVD TCP+V K V+ +
Sbjct: 57 ----KDLDSMDSGTIIIR-SHGVASHEIAEAMQKKLEIVDATCPFVKKAQEHVKSLSETG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G H E S+ G + +++G +G K +
Sbjct: 112 YGVVVVGDADHPEVQGIVSYGGDKV-------------FVVG---SGEEVRKLPIMN--- 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K+G+ QTT E + +V + + R + FNTIC
Sbjct: 153 --------------KIGVVAQTTQ---SFENLKNVVSECLQRGGEIR-------VFNTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
DAT RQ+ K + +VD +LVV E+ + ++ I++ I P
Sbjct: 189 DATAVRQEE-AKELARQVDCMLVVGGFNSANTRRLAEVCAELQPRTHHIETAAEIDPA-- 245
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
W +G T+G+T+GASTP +++V+ ++ EI ++
Sbjct: 246 ---------------WF-EGVATVGVTAGASTPKWIIDEVMGRIGEINKK 279
>gi|238800384|gb|ACR56057.1| At4g34350-like protein [Solanum hirtum]
gi|238800386|gb|ACR56058.1| At4g34350-like protein [Solanum quitoense]
gi|238800388|gb|ACR56059.1| At4g34350-like protein [Solanum quitoense]
Length = 106
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/54 (88%), Positives = 52/54 (96%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFP 54
MN+EYTSDIIKKLK+N +EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP
Sbjct: 52 MNREYTSDIIKKLKDNEYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFP 105
>gi|238800390|gb|ACR56060.1| At4g34350-like protein [Solanum hirtum]
Length = 106
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/54 (88%), Positives = 52/54 (96%)
Query: 1 MNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFP 54
MN+EYTSDIIKKLK+N +EYTWGNV VKLAE+YGFCWGVERAVQIAYEARKQFP
Sbjct: 52 MNREYTSDIIKKLKDNEYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFP 105
>gi|83584371|gb|ABC24960.1| plastid lyt B-like protein (4-hydroxy-3-methylbut-2-enyl
diphosphate reductase) [Prototheca wickerhamii]
Length = 189
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
Query: 7 SDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIH 66
+ ++ ++E+G + + V LAE+YGFCWGVERAVQIAYEAR ++PE ++ ITNEIIH
Sbjct: 75 TGLVAPMRESGNVWHQSGITVVLAEAYGFCWGVERAVQIAYEARHRYPEAEVHITNEIIH 134
Query: 67 NPTVNKRLEEMAVQNIPVEEGKKQFD---VVNKGDV-VVLPAFGAAVEEMVTLNN 117
P+VN+RL ++P + + + VV + DV P FGAAV+EM + N
Sbjct: 135 KPSVNERLRRWVCTSLPTIDQRASRNLTRVVGRADVGQSCPPFGAAVKEMKSCLN 189
>gi|218961512|ref|YP_001741287.1| putative bifunctional Cytidylate kinase /
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(Cytidine monophosphate kinase /
Isopentenyl-diphosphate:NAD(P)+ oxidoreductase)
(cmk/ispH-like) [Candidatus Cloacamonas acidaminovorans]
gi|167730169|emb|CAO81081.1| putative bifunctional Cytidylate kinase /
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(Cytidine monophosphate kinase /
Isopentenyl-diphosphate:NAD(P)+ oxidoreductase)
(cmk/ispH-like) [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 535
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 166/374 (44%), Gaps = 99/374 (26%)
Query: 4 EYTSDIIKKLKENGFEYTWG--NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWIT 61
E T II+K+ N + G +K++LA G+C+GV+RA+Q+A +A+ E+ ++
Sbjct: 218 EITCRIIEKIDNNNSDKELGERKIKIRLANYLGYCFGVKRAIQMAKDAK--VTEKPVYTL 275
Query: 62 NEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGD-----VVVLPAFGAAVEEMVTLN 116
E+IHNP + + LEE + +VNK + V++ + G EE L
Sbjct: 276 GELIHNPAIVQELEEQGIH------------IVNKAEEVKNSTVIIRSHGITKEEYKILK 323
Query: 117 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 176
N +I+D TCP+V + T ++ K +Y +I G H+E + S+ E
Sbjct: 324 ENNNEIIDATCPYVKRTHTILKHLVKENYPVLILGDKQHQEVIGIRSYGN---------E 374
Query: 177 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 236
+V GE + KE ++ I QTT E++
Sbjct: 375 KTFVI-----GEDDPIPKIKEK--------------------RLAIMAQTTQ---RIEKL 406
Query: 237 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------- 288
+LV K + N NE + FNTIC AT +RQ A ++ +E D + V+
Sbjct: 407 QELVYKLL------SNFNELRV-FNTICLATTQRQKAAEELAQES-DAMFVIGGLKSSNT 458
Query: 289 -EIAEDRGI--PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
+A+ + P+Y I+ EK++ + YK IGIT+GASTP
Sbjct: 459 CALAKLSSVYCPTYHIEDEKQLASIDISPYK------------------CIGITAGASTP 500
Query: 346 DKAVEDVLKKVFEI 359
E+++ KV+ +
Sbjct: 501 ----EEMIIKVYNV 510
>gi|449102982|ref|ZP_21739729.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola AL-2]
gi|448965784|gb|EMB46445.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola AL-2]
Length = 289
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 151/346 (43%), Gaps = 76/346 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +G
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEGA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATSDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVF 357
+Y + +G+T+GASTPD +++V KK+
Sbjct: 260 IFSYSV------------------VGLTAGASTPDFIIDEVEKKLL 287
>gi|291280465|ref|YP_003497300.1| hydroxymethylbutenyl pyrophosphate reductase [Deferribacter
desulfuricans SSM1]
gi|290755167|dbj|BAI81544.1| hydroxymethylbutenyl pyrophosphate reductase [Deferribacter
desulfuricans SSM1]
Length = 287
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 158/346 (45%), Gaps = 74/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +AE GFC+GVERAV I + + + + IIHNP + +L+E V +P+
Sbjct: 1 MKILVAEHAGFCFGVERAVGIVEDTANK--KSNVITLGPIIHNPQLVNKLKEKGV--LPL 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D V V++ + G + L NK V+I+D TCP+V K S K K
Sbjct: 57 E----NIDEVKDVHTVIIRSHGITKDNYELLKNKGVEIIDATCPFVIKAHNSAMKLSKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y+ I+ G +H E S+ G+Y +V N +EA+ + F
Sbjct: 113 YSVIVFGDKNHPEVKGIVSYVEGEYFLVSNSEEAKNL---------------------PF 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+K K G+ QTT EE+ +V+ + NTI
Sbjct: 152 RK-------------KYGLVAQTTQNSQSFEEVVSVVQDKC----------DELKVINTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRG-------IPSYWIDSEKRIGPGNKIAYK 316
C+AT RQ+A K V ++VD+++V+ ++ G I S + I ++++ K
Sbjct: 189 CNATTHRQEAA-KEVAKQVDMMIVIG-GKNSGNTRRLFEICSELCKNTVHIETKDELSEK 246
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
+ E +EK +GIT+GASTPD ++DV+ + E+K E
Sbjct: 247 MF--ENIEK----------VGITAGASTPDYLIKDVINYLEEVKNE 280
>gi|145589911|ref|YP_001156508.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048317|gb|ABP34944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 311
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 156/348 (44%), Gaps = 79/348 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ +A+ GFC GV+RA+ I EA +F I++ +EI+HN V L +
Sbjct: 4 NAEILMAQPRGFCAGVDRAINIVNEALTRF-GPPIYVRHEIVHNAYVVNELRNKGAVFV- 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ D V KG +VV A G + E V + +Q+ D TCP V+KV V K K
Sbjct: 62 -----DELDEVPKGGIVVFSAHGVSQEVRVDAEERGLQVYDATCPLVTKVHLEVIKMCKE 116
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE-LNGSSSTKEAFLEK 202
+T ++ G H E T + +KE ++ + + + L +S K AF+
Sbjct: 117 GFTVLMIGHAGHPEVEGT---------MGQVKEGVFLIEKVSDVDTLTFPASEKIAFV-- 165
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
QTT+ ET+EI + + +KF N+ +
Sbjct: 166 ---------------------TQTTLSVDETKEI----VEALTKKF--PNIVQP--RKQD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K + +V+L++VV E++E G+PSY +D+ +++ P
Sbjct: 197 ICYATQNRQDAV-KFMAPQVELVIVVGSAASSNSNRLRELSEKLGVPSYMVDAPEQLKP- 254
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
W G+ IG+T+GAS P+ + ++ K+ E
Sbjct: 255 ----------------EWF-VGKKRIGLTAGASAPESLAQSIVNKIQE 285
>gi|225848129|ref|YP_002728292.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643312|gb|ACN98362.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 287
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 56/337 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V +K+A++ GFC+GV AV +A +A +Q + IIHN V LE + ++ +
Sbjct: 2 VNIKVAQTAGFCFGVRIAVDMAKKAGEQLGHA--YTNGPIIHNKQVVSYLESIGIKEL-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K + + G+ V++ + G E L + N+ ++D TCP+V KV V + +
Sbjct: 58 ----KDYSQLKPGETVIIRSHGVPPETERQLKSMNINVLDATCPFVKKVHDKVRQLVEEG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G+ H E + T + ++K E+NG E F + K
Sbjct: 114 YFVVIIGEEGHPEVIGT---------LGHLK------------EVNGQGVVVENFEDLIK 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKG-ETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K + K+G+ QTT + E +G L E T E FNTI
Sbjct: 153 KVPKRN--------KIGVVAQTTQSEDFFREAVGYLAENT-----------EELKVFNTI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
CDAT RQ+ + K+ VD+++++ + G K + P Y + E +
Sbjct: 194 CDATSVRQEEVKKLA-PTVDVMIIIG-GKHSGNTQRLAQISKALNPN---TYHIETAEEL 248
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
+KE W +G+ +GI++GASTPD + V++K+ ++K
Sbjct: 249 QKE-WF-EGKDNVGISAGASTPDWIINQVVEKIKQLK 283
>gi|410996382|gb|AFV97847.1| hypothetical protein B649_07675 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 85/349 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LAESYGFC+GV+RA++IA E R +IHN RL+ N+ +
Sbjct: 1 MKIELAESYGFCFGVKRAIKIAEENRNS------STYGPLIHNANEIDRLKNDF--NVAL 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E F V G+ V+ G +E+ TL+ + V +VD TCP+V+K E+
Sbjct: 53 SENLDSFKV---GETAVIRTHGIPKQELSTLHERQVNVVDATCPYVTKPQQICEEMSAQG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S+A ++ V N S E K +
Sbjct: 110 YDIVIFGDEAHPEIKGVKSYADDHVYVVN--------------------SLDELDALKLR 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ KV QTT + EE ++V K M + V FNTIC
Sbjct: 150 E-------------KVATVAQTTR---KIEEYQQIVRKLMAKHKEVR-------VFNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + QDA+ + +K D+++V+ IA++ SY I+S+ +
Sbjct: 187 NATFDNQDAVRDLA-QKADVMIVIGGKNSSNTKQLHSIAKEYCSDSYHIESQDDL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
+ENW GI++GASTPD +++V+ K+ + R
Sbjct: 241 ------------QENWFDTKTFC-GISAGASTPDWIIDEVVAKIKSLTR 276
>gi|313682011|ref|YP_004059749.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfuricurvum
kujiense DSM 16994]
gi|313154871|gb|ADR33549.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfuricurvum
kujiense DSM 16994]
Length = 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 149/344 (43%), Gaps = 85/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LAESYGFC+GV+RA++IA E R +IHN RL+ N+ +
Sbjct: 1 MKIELAESYGFCFGVKRAIKIAEENRNS------ATYGPLIHNANEIDRLKNDF--NVAL 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D GD V+ G +E+ TLN +NV ++D TCP+V+K E+
Sbjct: 53 SEN---LDSFRAGDTAVIRTHGIPKQELSTLNERNVNVIDATCPYVTKPQQICEEMSAQG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G SH E S+A + V N E++G + +
Sbjct: 110 YDIVIFGDESHPEIKGVKSYAIGNVFVVNSP-----------SEIDGLNLRE-------- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV QTT + EE ++V K M V FNTIC
Sbjct: 151 --------------KVATVAQTTR---KIEEYQQIVGKLMADHKEVR-------VFNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + QDA+ + +K D+++V+ IA++ SY I+S+ +
Sbjct: 187 NATFDNQDAVRDLA-QKADVMIVIGGKNSSNTKQLHSIAKEYCQDSYHIESQNDL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W + + GI++GASTPD ++DV+ K+
Sbjct: 241 ------------QSEWFSEKEFC-GISAGASTPDWIIDDVISKI 271
>gi|42526606|ref|NP_971704.1| hydroxymethylbutenyl pyrophosphate reductase [Treponema denticola
ATCC 35405]
gi|449112283|ref|ZP_21748837.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33521]
gi|449115498|ref|ZP_21751962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 35404]
gi|50400910|sp|Q73NQ6.1|ISPH_TREDE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|41816799|gb|AAS11585.1| hydroxymethylbutenyl pyrophosphate reductase [Treponema denticola
ATCC 35405]
gi|448953275|gb|EMB34070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 35404]
gi|448955745|gb|EMB36509.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33521]
Length = 289
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 155/341 (45%), Gaps = 64/341 (18%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVRTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTEDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT +RQ A+ K+ E VD +LV+ A + + +D++K
Sbjct: 202 CPATSDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKK-------------PA 247
Query: 321 ELVEKENWLPKGQIT---IGITSGASTPDKAVEDVLKKVFE 358
L+E + +PK + IG+T+GASTPD +++V KK+ E
Sbjct: 248 WLIEDASEIPKEIFSYSVIGLTAGASTPDFIIDEVEKKLLE 288
>gi|166031926|ref|ZP_02234755.1| hypothetical protein DORFOR_01627 [Dorea formicigenerans ATCC
27755]
gi|166028379|gb|EDR47136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans ATCC 27755]
Length = 294
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 156/346 (45%), Gaps = 77/346 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N++V+LA+S GFC+GV+RAV Y+ ++ EKI+ IIHN V K +E+ V+ I
Sbjct: 9 NMQVELAKSAGFCFGVQRAVDTVYKQIEENSAEKIYTYGPIIHNEEVIKDMEKKGVEVIL 68
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
EE KQ + +V++ + G L+ V+ VD TCP+V K+ VE+ +
Sbjct: 69 SEEELKQIE----SGIVIIRSHGVPKRICDLLDENGVRYVDATCPFVKKIHRIVEEKSRD 124
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y +I G H E + +A G I++ +EA
Sbjct: 125 GYHIVIIGNREHPEVMGIEGWAQGPATIIQTEEEA------------------------- 159
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ F+ + KV + QTT + LVE +++ + I NT
Sbjct: 160 ------RAFELVPESEKVCVVAQTTF---NYNKFKDLVEIISEKRYDI-------IVLNT 203
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+AT+ERQ+ Y + ++VD ++V+ EI + +Y+I + +G
Sbjct: 204 ICNATKERQEEAYD-IAKRVDAMIVIGDKRSSNTQKLFEICSNACADTYYIQT---LGDL 259
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
N N L + T+GIT+GASTP+K +E+V V
Sbjct: 260 NM--------------NQLRSVE-TVGITAGASTPNKIIEEVQNNV 290
>gi|449109772|ref|ZP_21746405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33520]
gi|448958225|gb|EMB38958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33520]
Length = 289
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 151/347 (43%), Gaps = 76/347 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATSDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+Y + IG+T+GASTPD +++V KK+ E
Sbjct: 260 IFSYSV------------------IGLTAGASTPDFIIDEVEKKLLE 288
>gi|325294238|ref|YP_004280752.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064686|gb|ADY72693.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 299
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 153/342 (44%), Gaps = 85/342 (24%)
Query: 28 KLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG 87
++A+S GFCWGV+RAV IA +A ++ K++ E+IHN +RL+++ + I
Sbjct: 4 RVAKSAGFCWGVKRAVNIAVDAVRK--NGKVYCLGELIHNKREIERLKKLGIVFI----- 56
Query: 88 KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTS 147
+ DV+ KG+ V++ + G + + + L K +QIVD TCP+V V V K +K Y
Sbjct: 57 -EDIDVLKKGNTVIIRSHGVSPKVIEFLKRKGLQIVDATCPFVKDVHEKVMKLEKEGYPV 115
Query: 148 IIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+I G H E + A +I+ ++E +E+ K
Sbjct: 116 LILGNPKHPEVIGIAGHVKSPMIMNTIEE-----------------------IERLPK-- 150
Query: 208 SKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
L K+G+ QTT+ + E + +L K K +NTIC A
Sbjct: 151 ---------LSKLGVVCQTTLNMDFFREAVFRLALKVKELKV-----------YNTICSA 190
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ K+ + VD++L+V +I++ SY I+S++ I
Sbjct: 191 TSIRQSEAKKLALQ-VDVMLIVGGRNSSNTTKLYQISKSVNSKSYHIESKEEI------- 242
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W QI IGIT+GASTP +E+V+ V
Sbjct: 243 ----------DSLWFENAQI-IGITAGASTPQWVIEEVVNYV 273
>gi|339500441|ref|YP_004698476.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spirochaeta
caldaria DSM 7334]
gi|338834790|gb|AEJ19968.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spirochaeta
caldaria DSM 7334]
Length = 289
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 156/345 (45%), Gaps = 75/345 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
VK A G+C GVERA++ Y+ + PE KI +IHNP +L+E + I
Sbjct: 3 VKRAVVCGYCMGVERAIKKTYQELEAHPERKILTLGPLIHNPITLGQLQEKGISII--HN 60
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
++ D V V++ A G E + N ++VD TCP V + + Y
Sbjct: 61 HEEITDPVQ--TTVIIRAHGVPPEVAQNIINTGAKLVDATCPKVHISQKKAAQFAQAGYQ 118
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G+ H E + +A I++KN++EA V ++ K+
Sbjct: 119 VLIVGEPEHSEIIGILGYAPHAIVIKNLEEALQVA-------------------QRIKQ- 158
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
+G + VK+ + QTT + E+I +++ + + EH TIC+A
Sbjct: 159 -HQG-----EYVKIVLMAQTTFSEITFEKI-----VNTLKELFPDLIVEH-----TICNA 202
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T+ERQ+A+Y + +E VD +LV+ IAE++G+P + I+ E +I
Sbjct: 203 TRERQEALYNLCKE-VDALLVIGGKESANTQRLKSIAEEQGVPVWLIEDEHKIP------ 255
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKA---VEDVLKKV 356
E+ P T+GIT+GASTP + VE +LK V
Sbjct: 256 ---------EQIYEFP----TVGITAGASTPKEIIDRVESILKTV 287
>gi|337737064|ref|YP_004636511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum DSM 1731]
gi|384458572|ref|YP_005670992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum EA 2018]
gi|325509261|gb|ADZ20897.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium acetobutylicum EA 2018]
gi|336292418|gb|AEI33552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium acetobutylicum DSM 1731]
Length = 642
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 54/333 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LAE GFC+GV+RAV +A +K++ +KI+ E+IHN V +L++ V I +E
Sbjct: 3 KVMLAEKAGFCFGVKRAVDMALLTQKEY-NKKIYTLGELIHNNDVVDKLKDNNVYPIGIE 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D + + DV+++ + G + E L +K + +++ TCP+V+K+ V+K+ + Y
Sbjct: 62 D----IDNLKENDVILIRSHGISEEIYKILLSKGLTVINATCPFVTKIQEKVKKYNELGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G H E + + I+ E N + T E+
Sbjct: 118 DIVIVGDKYHPEVIGINGWCDNKAIISKQGE-------------NLENITSES------- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV I +QTT + E K++++ R V ISFNTIC+
Sbjct: 158 -------------KVCIVSQTTE---KLENWEKVLKEVKNRAIEV-------ISFNTICN 194
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT ERQ + K + KVD ++V+ + + E N+ + GE+
Sbjct: 195 ATSERQ-KIAKDLSNKVDFMVVIGGKQSSNTTKLY---EICKSNCNETIHVENSGEI--P 248
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
EN L IG+T+GASTPD +E+ + K+ E
Sbjct: 249 ENILKNKNCVIGVTAGASTPDWIIEEAISKMSE 281
>gi|15895122|ref|NP_348471.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum ATCC 824]
gi|50401136|sp|Q97I09.1|ISPH_CLOAB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|15024823|gb|AAK79811.1|AE007693_9 penicillin tolerance LytB domain/S1 ribosomal protein fusion
[Clostridium acetobutylicum ATCC 824]
Length = 642
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 54/333 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LAE GFC+GV+RAV +A +K++ +KI+ E+IHN V +L++ V I +E
Sbjct: 3 KVMLAEKAGFCFGVKRAVDMALLTQKEY-NKKIYTLGELIHNNDVVDKLKDNNVYPIGIE 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D + + DV+++ + G + E L +K + +++ TCP+V+K+ V+K+ + Y
Sbjct: 62 D----IDNLKENDVILIRSHGISEEIYKILLSKGLTVINATCPFVTKIQEKVKKYNELGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G H E + + I+ E N + T E+
Sbjct: 118 DIVIVGDKYHPEVIGINGWCDNKAIISKQGE-------------NLENITSES------- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV I +QTT + E K++++ R V ISFNTIC+
Sbjct: 158 -------------KVCIVSQTTE---KLENWEKVLKEVKNRAIEV-------ISFNTICN 194
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT ERQ + K + KVD ++V+ + + E N+ + GE+
Sbjct: 195 ATSERQ-KIAKDLSNKVDFMVVIGGKQSSNTTKLY---EICKSNCNETIHVENSGEI--P 248
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
EN L IG+T+GASTPD +E+ + K+ E
Sbjct: 249 ENILKNKNCVIGVTAGASTPDWIIEEAISKMSE 281
>gi|449120498|ref|ZP_21756883.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H1-T]
gi|449122905|ref|ZP_21759236.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola MYR-T]
gi|448947001|gb|EMB27851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola MYR-T]
gi|448947893|gb|EMB28736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H1-T]
Length = 289
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 155/341 (45%), Gaps = 64/341 (18%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVRTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTEDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT +RQ A+ K+ E VD +LV+ A + + +D++K
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKK-------------PA 247
Query: 321 ELVEKENWLPKGQIT---IGITSGASTPDKAVEDVLKKVFE 358
L+E + +PK + IG+T+GASTPD +++V KK+ E
Sbjct: 248 WLIEDASEIPKEIFSYSVIGLTAGASTPDFIIDEVEKKLLE 288
>gi|332982232|ref|YP_004463673.1| hydroxymethylbutenyl pyrophosphate reductase [Mahella australiensis
50-1 BON]
gi|332699910|gb|AEE96851.1| hydroxymethylbutenyl pyrophosphate reductase [Mahella australiensis
50-1 BON]
Length = 718
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 61/340 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ AE+ GFC+GV RAV Y++ ++ E+I+ IIHNP V +E++A + + V
Sbjct: 1 MKIIRAETAGFCFGVRRAVDYVYKSIEEHRNERIYTLGPIIHNPQV---VEDLASKGVKV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D ++ G +V++ + GA + L K+++ +D TCP+V++V VE++ +
Sbjct: 58 ---LNNVDDIDDG-LVIIRSHGAGPDVYERLKAKDLRFIDATCPYVARVHKKVEEYYRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGK-YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y II G+ H E + T + IIV ++ EA +
Sbjct: 114 YQIIIAGEADHPEVIGTNGWCNNTAIIVNDVDEASRL----------------------- 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
P +D KV + QTT+ + E+I K++ + VNE I FNTI
Sbjct: 151 ---------PQLD--KVCVVAQTTLNGSKWEDILKIL---------LPKVNELQI-FNTI 189
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C AT +RQ+ ++ + +I++ Y I K+ + E
Sbjct: 190 CYATSQRQEEALQIAKLSTAVIVIGGRNSSNTRKLYEICC--------KVCDRAFLIESA 241
Query: 324 EK-ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
++ +N K +GIT+GASTPD +E+V+ K+ E+ ++
Sbjct: 242 DEIDNLSIKPDDVVGITAGASTPDGIIEEVITKMEELNKD 281
>gi|404493520|ref|YP_006717626.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Pelobacter
carbinolicus DSM 2380]
gi|123573952|sp|Q3A3D3.1|ISPH_PELCD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|77545562|gb|ABA89124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Pelobacter
carbinolicus DSM 2380]
Length = 279
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 160/341 (46%), Gaps = 66/341 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+S GFC+GV+RA +A++A +QF E I IIH+P V K+LEE ++ I
Sbjct: 1 MKIILADSAGFCFGVKRATNLAFDAAEQF--EHICSLGPIIHSPQVVKKLEEKGIKVI-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + ++ G V++ + G EE+ ++++ ++IVD TCP+V K
Sbjct: 57 ----RKVEDIDHG-AVIIRSHGITAEELDIIHDRELKIVDATCPFVKKAQDYATMLCNEG 111
Query: 145 YTSIIHGKYSHEETVATASF--AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y+ ++ G+ H E S+ G+ +V + KEA+ +
Sbjct: 112 YSVVLVGEKDHPEVQGIISYTRGGEVFVVADCKEAQRL---------------------- 149
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
P+ K+GI QTT ++I + ++ FNT
Sbjct: 150 ----------PNRP--KLGIVAQTTQSFKNLQQIADICLGK----------SKEVRIFNT 187
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
ICDAT RQ+ K+ E DL+LVV G S +I +I + H E
Sbjct: 188 ICDATSVRQNEARKIACE-ADLMLVVG-----GFNSANTTRLAQIC--QEIQPRTFHVET 239
Query: 323 VEK--ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
VE+ + W +G +GIT+GASTP ++ V+++V ++ +
Sbjct: 240 VEQIQDGWF-EGVECVGITAGASTPRWIIDQVVERVSDMSK 279
>gi|449118058|ref|ZP_21754473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H-22]
gi|448949949|gb|EMB30773.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H-22]
Length = 289
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 152/347 (43%), Gaps = 76/347 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKIAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D +NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSVNGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+Y + +G+T+GASTPD +++V KK+ E
Sbjct: 260 IFSYSV------------------VGLTAGASTPDFIIDEVEKKLLE 288
>gi|346306185|ref|ZP_08848347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans 4_6_53AFAA]
gi|345905906|gb|EGX75641.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans 4_6_53AFAA]
Length = 285
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 155/345 (44%), Gaps = 77/345 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V+LA+S GFC+GV+RAV Y+ ++ EKI+ IIHN V K +E+ V+ I
Sbjct: 1 MQVELAKSAGFCFGVQRAVDTVYKQIEENSAEKIYTYGPIIHNEEVIKDMEKKGVEVILS 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE KQ K +V++ + G L+ V+ VD TCP+V K+ VE+ +
Sbjct: 61 EEELKQI----KSGIVIIRSHGVPKRICDLLDENGVRYVDATCPFVKKIHRIVEEKSRDG 116
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G H E + +A G I++ +EA
Sbjct: 117 YHIVIIGNREHPEVMGIEGWAQGPATIIQTEEEA-------------------------- 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ F+ + KV + QTT + LVE +++ + I NTI
Sbjct: 151 -----RAFELVPESEKVCVVAQTTF---NYNKFKDLVEIISEKRYDI-------IVLNTI 195
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C+AT+ERQ+ Y + ++VD ++V+ EI + +Y+I + +G N
Sbjct: 196 CNATKERQEEAYD-IAKRVDAMIVIGDKRSSNTQKLFEICSNACADTYYIQT---LGDLN 251
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
N L + T+GIT+GASTP+K +E+V V
Sbjct: 252 M--------------NQLRSVE-TVGITAGASTPNKIIEEVQNNV 281
>gi|449125873|ref|ZP_21762175.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola OTK]
gi|448939842|gb|EMB20759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola OTK]
Length = 289
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 154/341 (45%), Gaps = 64/341 (18%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVRTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTEDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT +RQ A+ K+ E VD +LV+ A + + +D++K
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKK-------------PS 247
Query: 321 ELVEKENWLPKGQI---TIGITSGASTPDKAVEDVLKKVFE 358
L+E + +PK IG+T+GASTPD +++V KK+ E
Sbjct: 248 WLIEDASEIPKEIFYYSVIGLTAGASTPDFIIDEVEKKLLE 288
>gi|452944236|ref|YP_007500401.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrogenobaculum sp. HO]
gi|452882654|gb|AGG15358.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrogenobaculum sp. HO]
Length = 286
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 91/344 (26%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV +A++ GFC+GV+RA+ +A A K+ +++ +IHNP RL M +
Sbjct: 3 KVLIAKNAGFCYGVKRAITLAERAAKE--HNRVYTLGPLIHNPQEVNRLSNMGI------ 54
Query: 86 EGKKQFDV-VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K D ++K V++ + G + E+ L N ++VD TCP+V V +V K
Sbjct: 55 --KTATDTNIDKDATVIVRSHGISPEKERLLRNTFAKVVDATCPYVKAVHEAVVSLAKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y +I G+ H E T + G+Y ++ ++++ E
Sbjct: 113 YFVVIVGEKDHPEVQGTVGYLEEAKGRYKVIDSLEDLE---------------------- 150
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
D+ KVGI QTT EI E +++ +NV E +
Sbjct: 151 -------------DIKEDKVGIVAQTTQ-----NEI--FFENVVLKLL--KNVKELKV-I 187
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTIC+AT+ERQ +Y++ VD+++++ EI++ SY I+++ I
Sbjct: 188 NTICNATEERQSDIYELAP-TVDVMIIIGGKNSGNTKRLFEISKSLNPRSYHIETKDEID 246
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
P +WL +G TIGI++GASTPD +EDV
Sbjct: 247 P-----------------SWL-EGAETIGISAGASTPDWIIEDV 272
>gi|254447627|ref|ZP_05061093.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HTCC5015]
gi|198262970|gb|EDY87249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HTCC5015]
Length = 326
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 149/346 (43%), Gaps = 80/346 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N + LA GFC GV+RA+ I A + FP I++ +E++HN V L E I
Sbjct: 7 NATIYLANPRGFCAGVDRAIDIVERALEHFPP-PIYVRHEVVHNKYVVDDLREKGA--IF 63
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
VEE V V+ A G AVEE + +Q+ D TCP V+KV V ++
Sbjct: 64 VEE----LHEVPDDSTVIFSAHGVSRAVEE--EAERRGLQVFDATCPLVTKVHMEVARYS 117
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV--CDYILGGELNGSSSTKEAF 199
K + I+ G H E T G+YI E V + +L E+N
Sbjct: 118 KKNKEVIMIGHEGHPEVEGTM---GRYIKSGGKGEMYLVESPEDVLALEVN--------- 165
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
DPD + QTT+ +T E V + + RKF +
Sbjct: 166 ------------DPD----NLAFVTQTTLSMDDTSE----VIEALQRKFPKLDSPRK--- 202
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ MV++ DL+LV VEI G+ SY +D++ I
Sbjct: 203 -EDICYATQNRQDAIKSMVKQ-CDLLLVVGSKNSSNSKRLVEIGLKNGVDSYLVDNKSEI 260
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
P +WL +G+ ++G++SGAS P+ V +VL
Sbjct: 261 DP-----------------DWL-EGKRSVGLSSGASAPEVLVREVL 288
>gi|197119622|ref|YP_002140049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
bemidjiensis Bem]
gi|226741034|sp|B5E9S9.1|ISPH_GEOBB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|197088982|gb|ACH40253.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
bemidjiensis Bem]
Length = 283
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 72/346 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC+GV+RA Q+A++A E + IIH+P V +RLEEM V IPV
Sbjct: 1 MQVILAKHAGFCFGVKRATQLAFQAANIGSET--YTLGPIIHSPQVVQRLEEMGV--IPV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + V G +++ + G A EE+ N+++VD TCP+V K V K
Sbjct: 57 DNVSE----VETGGTIIIRSHGVAAEELEAAVRANLEVVDATCPFVKKAQEHVATLSKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G H E S+A G+ +V + K+ +E+
Sbjct: 113 YDIVVVGDAVHPEVQGIVSYAAGRVYVVSSHKD-----------------------VERL 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ + K+G+ QTT E + ++V + R G V +NTI
Sbjct: 150 PR-----------MSKIGVVAQTTQ---SFEHLHEVVAACLARG-GEARV------YNTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM----H 319
CDAT RQ+ K+ VD ++V I + + R+ +I +L+ H
Sbjct: 189 CDATAVRQEEAKKLAG-AVDCMVV--------IGGFNSANTMRLA---QICLELLPRTHH 236
Query: 320 GELVEK--ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
E + E W KG +G+T+GASTP +++V+ ++ I +++
Sbjct: 237 VETASQIDEQWF-KGVKKVGVTAGASTPKWIIDEVIDRISAIDKDK 281
>gi|422342925|ref|ZP_16423864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola F0402]
gi|325473142|gb|EGC76338.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola F0402]
Length = 289
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 64/341 (18%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKI--WITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K+ + +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKLGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A G+ +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGRCLIVQNAEEAALI-DLPSSLSANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT +RQ A+ K+ E VD +LV+ A + + +D++K
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKK-------------PA 247
Query: 321 ELVEKENWLPKGQIT---IGITSGASTPDKAVEDVLKKVFE 358
L+E + +PK + IG+T+GASTPD +++V KK+ E
Sbjct: 248 WLIEDASEIPKEIFSYSVIGLTAGASTPDFIIDEVEKKLLE 288
>gi|148263532|ref|YP_001230238.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
uraniireducens Rf4]
gi|189045809|sp|A5GE10.1|ISPH_GEOUR RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|146397032|gb|ABQ25665.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
uraniireducens Rf4]
Length = 282
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 65/342 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC+GV+RA Q+A+EA + K + IIH+P V ++LEEM V+ +
Sbjct: 1 MKVILAKQAGFCFGVKRATQMAFEAADKGG--KTYTLGPIIHSPQVVQKLEEMGVKAL-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K ++ G +++ + G A E+ K ++IVD TCP+V K VE +
Sbjct: 57 ----KDISGMDDG-TIIIRSHGVASGELEEAVRKELEIVDATCPFVKKAQEHVESLSQAG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G H E S+A + Y++G S + A L K
Sbjct: 112 YDVVVVGDADHPEVQGIVSYASGKV-------------YVVG------SGDEAAKLPK-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ K+G+ QTT ++ E K V + K G V F+TIC
Sbjct: 151 ------------MAKIGVVAQTT----QSFENLKNVVDACLTKGGEIRV------FHTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGELV 323
DAT RQ+ K + +VD ++V I Y + KR+ ++ + H E+
Sbjct: 189 DATAVRQEEA-KELASQVDCMIV--------IGGYNSANTKRLAEVCTELQPRTYHIEMA 239
Query: 324 EKEN--WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
++ N W +G +G+T+GASTP +++VL+++ +I +++
Sbjct: 240 QQLNPRWF-EGVGKVGVTAGASTPKWLIDEVLEQIEKINKDK 280
>gi|331697465|ref|YP_004333704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudonocardia
dioxanivorans CB1190]
gi|326952154|gb|AEA25851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudonocardia
dioxanivorans CB1190]
Length = 509
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 91/355 (25%)
Query: 21 TW----GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE 76
TW G V+LAE FC GVERA++I A ++ +++ +I+HN V +RL +
Sbjct: 195 TWLDATGPRTVRLAEPRSFCAGVERAIEIVDRALDRY-GAPVYVRRQIVHNAHVVRRLTD 253
Query: 77 MAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTS 136
+ ++ D V G VVL A G + + + + +VD TCP V+KV T
Sbjct: 254 RGAVFV------QEVDEVPPGAHVVLAAHGVSPAVRADADARGLSVVDATCPLVAKVHTE 307
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
V +H + + ++ G HEE T A + V +E S+ T
Sbjct: 308 VRRHARRGESVLLIGHSDHEEVEGTVGEAPARVTVVEDEE---------------SARTV 352
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
E D +V A QTT+ E E I + + E
Sbjct: 353 EVP----------------DPTRVAYAMQTTLAVDEAERIAAI-------------LRER 383
Query: 257 FISF-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSY 299
F S + IC AT RQ A+ + V VDL++VV E+A +G+P++
Sbjct: 384 FPSIAAPRQDDICYATTNRQRAI-RAVSADVDLVIVVGSPNSSNSRRLAEVAARQGVPAH 442
Query: 300 WIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+D + +WL G +G+++GAS PD V++V+
Sbjct: 443 LVDDVSEL-----------------DLSWL-AGVGRVGLSAGASAPDDLVDEVVS 479
>gi|390934973|ref|YP_006392478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570474|gb|AFK86879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 283
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 157/340 (46%), Gaps = 58/340 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC+GV+RAV++AY+ + K + E+IHNP V K LE ++ I
Sbjct: 1 MKILIADNAGFCFGVKRAVKMAYDQVNNGDDFKTYAYGELIHNPQVVKDLENKGIKTI-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D +++ +++ G + L K V+I+D TCP+V +V V + K
Sbjct: 59 ----EHIDELDENSKILIRTHGIPEKIYEELKKKKVEIIDMTCPFVKRVQKIVNGYYKKG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y+ +I G +H E V +NG + ++
Sbjct: 115 YSIVIIGDRNHPEVVG----------------------------VNGWCNNSAYVIQSID 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
S F L K + QTT+ + E+I L+ + IS+NTIC
Sbjct: 147 DVNSLPF-----LDKACVVAQTTITQKMWEDILALLRLKA----------KELISYNTIC 191
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
DAT +RQ + K+ +E VD+++V+ G S K+I N K + E +
Sbjct: 192 DATNKRQSSAEKISKE-VDMMIVI-----GGKNSSNTQKLKKICEKN--CDKTIQIENAD 243
Query: 325 KENWLPKGQI-TIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ + + + T+GIT+GASTPD +++V+ K+ ++ E
Sbjct: 244 EIDLIILKDVETVGITAGASTPDYLIQEVVDKITSGRKGE 283
>gi|221633636|ref|YP_002522862.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
gi|221156771|gb|ACM05898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
Length = 320
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 158/364 (43%), Gaps = 83/364 (22%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G ++ LAE G+CWGV RA++I +A + P I ++IHNP V +RL+ ++ +
Sbjct: 6 GEKRIVLAEVMGYCWGVRRALEIIQQAAQAGP---IATVGDVIHNPQVVERLKVQGIEPV 62
Query: 83 P-VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
V E +++ V + A GA + + ++++DTTCP V+KV EK
Sbjct: 63 SSVSEARER-----GFRRVAITAHGAGPQRAAEARDAGLELIDTTCPLVTKVQRLAEKLV 117
Query: 142 KGDYTSIIHGKYSHEETVATASFAG--KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
+ Y +++G H E +AG + + K++++ +
Sbjct: 118 RQGYFLVVYGDAHHPEVRGVLGWAGTSRAVAAKHLEDLPW-------------------- 157
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVEN-VNEH-- 256
K + V P KV + +QTT K ++ + G+ N V H
Sbjct: 158 --KGPRGVPGVVAPP---RKVAVVSQTT----------KQTDEFLAFALGLANWVARHGG 202
Query: 257 -FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
NTIC T ERQ+A+ + E VD++L V E+ G+PSY I+
Sbjct: 203 EIRIVNTICQPTWERQEALRALARE-VDVLLAVGGKKSSNTARLAEVGRACGVPSYHIER 261
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI--KR 361
+ I WL +G+ +G+T+GASTPD+ V V+ + + +R
Sbjct: 262 PEEI-----------------DRAWL-EGKRVVGVTAGASTPDEVVLAVVDHLAALGYQR 303
Query: 362 EEAL 365
E L
Sbjct: 304 PERL 307
>gi|206889179|ref|YP_002249560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741117|gb|ACI20174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 289
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 50/328 (15%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LAE GFC+GV+RA+ IA++ ++ ++ ++ IIHNP V +RL+++ V PV+E
Sbjct: 7 LAEGAGFCFGVKRAIDIAFDVAQKH-KDGVFTLGPIIHNPQVVERLKDLGVY--PVDEIS 63
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ +++ A G E+ L + +I+D TCP+V K EK Y +
Sbjct: 64 QK-----TIKTLIIRAHGIPKEKFNELKQLDCEIIDATCPFVKKAQNLAEKLASEGYQVL 118
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
I G H E S+AG+ IV N + E S K L K
Sbjct: 119 IIGDREHPEVKGIFSYAGEKAIVINHADNEL------------KESKKIPILNK------ 160
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
K+GI QTT + +EI M + N E FNT+C+ T
Sbjct: 161 ----------KIGIIQQTTQPMSKVKEI-------MNKIINSLNEFEEIRIFNTLCNFTS 203
Query: 269 ERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 328
R +A K+ +E VD+++VV ++ + + ++IG Y + + ++K+ W
Sbjct: 204 RRLEATEKVAKE-VDVMIVVG-GKNSANTTQLANLCRKIGVK---TYHIEDAQEIDKK-W 257
Query: 329 LPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + IG+T+GASTP +++V+ K+
Sbjct: 258 VNSAK-KIGVTAGASTPQWIIDEVIDKI 284
>gi|387782628|ref|YP_005793341.1| isoprenyl pyrophosphate/dimethylallyl diphosphate synthetase
[Helicobacter pylori 51]
gi|261838387|gb|ACX98153.1| isoprenyl pyrophosphate/dimethylallyl diphosphate synthetase
[Helicobacter pylori 51]
Length = 274
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ ++K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---ISKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|183984326|ref|YP_001852617.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
marinum M]
gi|183177652|gb|ACC42762.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium marinum M]
Length = 332
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 153/335 (45%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V L + + V
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +G +VV A G A +N+Q +D TCP V+KV + + D
Sbjct: 80 EE----TDQVPEGAIVVFSAHGVAPTVYAAAAERNLQTIDATCPLVTKVHNEARRFARND 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G HEE V TA A +++ +V + AE V
Sbjct: 136 YDILLIGHEGHEEVVGTAGEAPEHVQLVDGLDGAERVTIR-------------------- 175
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
D KV +QTT+ ET EI V + R +++ + I
Sbjct: 176 ------------DEEKVVWLSQTTLSVDETMEI---VARLRQRFPKLQDPPS-----DDI 215
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E DL+LVV R + E +G G + AY + + +
Sbjct: 216 CYATQNRQVAVKAMAPE-CDLVLVV---GSRNSSNSVRLVEVALGAGAQAAYLVDWADDI 271
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 272 D-QSWL-QGVTTVGVTSGASVPEVLVRGVLERLAE 304
>gi|443492461|ref|YP_007370608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium liflandii 128FXT]
gi|442584958|gb|AGC64101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium liflandii 128FXT]
Length = 348
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 66/340 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V L + + V
Sbjct: 40 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRYVVDTLAKAGA--VFV 95
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +G +VV A G A +N+Q +D TCP V+KV + + D
Sbjct: 96 EE----TDQVPEGAIVVFSAHGVAPTVYAAAAERNLQTIDATCPLVTKVHNEARRFARND 151
Query: 145 YTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G HEE V TA A +++ +V + AE V
Sbjct: 152 YDILLIGHEGHEEVVGTAGEAPEHVQLVDGLDGAERVTIR-------------------- 191
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
D D KV +QTT+ ET EI V + + F
Sbjct: 192 --------DED----KVVWLSQTTLSVDETMEI-------------VARLRQRFPKLQDP 226
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM 318
+ IC ATQ RQ A+ M E DL+LVV R + E +G G + AY +
Sbjct: 227 PSDDICYATQNRQVAVKAMAPE-CDLVLVV---GSRNSSNSVRLVEVALGAGAQAAYLVD 282
Query: 319 HGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ ++WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 283 WADDID-QSWL-QGVTTVGVTSGASVPEVLVRGVLERLAE 320
>gi|288818544|ref|YP_003432892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|384129297|ref|YP_005511910.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|288787944|dbj|BAI69691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|308752134|gb|ADO45617.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobacter
thermophilus TK-6]
Length = 301
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 90/358 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPE-EKIWITNEIIHNPTVNKRLEEMAVQNIP 83
V++ +AE GFC+GV+RA+ IA ++ + + ++++ +IHNP +RL + V+ +
Sbjct: 2 VEIVVAEHAGFCFGVKRAISIAEQSSELSKQGKRVFTMGPLIHNPQEVERLRKKGVELLY 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
E D + GD V++ + G ++ L + ++D TCP+V V +V K +
Sbjct: 62 TE------DALKSGDTVIIRSHGIPPKKERQLKELGLNVMDATCPYVKAVHDAVVKLSQE 115
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G+ SH E + T + E G + E+F +
Sbjct: 116 GYFVVLVGEKSHPEVIGTLGYLE---------------------ESGGKGTVVESF-DDL 153
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI----- 258
K + K KVGI QTT +F E V E I
Sbjct: 154 KAVLGKD--------KVGIVAQTTQ----------------NEQFFKEVVGEIAIWAKEV 189
Query: 259 -SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
NTIC+AT ERQ+ +YK+ E VD+++++ EI+ + SY I++
Sbjct: 190 KVINTICNATSERQEDVYKLAPE-VDVMIIIGGKNSGNTRRLYEISRSLNLNSYHIETAD 248
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
I P W G +GIT+GASTPD + V++++ E+ +EE
Sbjct: 249 DIKP-----------------EWFI-GVKRVGITAGASTPDWIINSVVERIREVSKEE 288
>gi|195953422|ref|YP_002121712.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobaculum sp.
Y04AAS1]
gi|195933034|gb|ACG57734.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobaculum sp.
Y04AAS1]
Length = 286
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 91/344 (26%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV +A++ GFC+GV+RA+ +A A K+ +EKI+ +IHNP RL M +
Sbjct: 3 KVLIAKNAGFCYGVKRAITLAERAAKE--QEKIYTLGPLIHNPQEVNRLSNMGI------ 54
Query: 86 EGKKQFDV-VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K D ++K V++ + G + E+ L N V++VD TCP+V V +V K
Sbjct: 55 --KTATDTNIDKDATVIVRSHGISPEKERLLRNTFVKVVDATCPYVKAVHEAVVSLAKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y +I G+ H E T + G+Y ++ ++++ E
Sbjct: 113 YFVVIVGEKDHPEVQGTVGYLEEAKGRYKVIDSLEDLE---------------------- 150
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
D+ KVGI QTT + E + + K +
Sbjct: 151 -------------DIKEDKVGIVAQTTQNEIFFENVVLKLLKKVKE----------IKVI 187
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTIC+AT+ERQ +Y++ VD+++++ EI++ SY I+++ I
Sbjct: 188 NTICNATEERQSDIYELAP-IVDVMIIIGGKNSGNTKRLFEISKSLNPRSYHIETKDEID 246
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
P +WL +G TIGI++GASTPD +EDV
Sbjct: 247 P-----------------SWL-EGAKTIGISAGASTPDWIIEDV 272
>gi|449128226|ref|ZP_21764473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP33]
gi|448941559|gb|EMB22460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP33]
Length = 289
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 150/346 (43%), Gaps = 76/346 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLTIAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A GK +IV+N +EA + D +NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGKCLIVQNAEEASLI-DLPSFLSVNGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ + E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKESEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVF 357
+Y + +G+T+GASTPD +++V KK+
Sbjct: 260 IFSYSM------------------VGLTAGASTPDFIIDEVEKKLL 287
>gi|15828043|ref|NP_302306.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
leprae TN]
gi|221230520|ref|YP_002503936.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
leprae Br4923]
gi|4539094|emb|CAB39812.1| lytB homolog [Mycobacterium leprae]
gi|13093596|emb|CAC30893.1| LytB homolog [Mycobacterium leprae]
gi|219933627|emb|CAR72035.1| LytB homolog [Mycobacterium leprae Br4923]
Length = 335
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 78/342 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ + +++ +++ +EI+HN V + LE + VE
Sbjct: 27 RVLLAEPRGYCAGVDRAVETVERSLRKY-GPPVYVRHEIVHNRHVVETLERAGA--VFVE 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +V+ A G A +N++ +D TCP V+KV V++ + DY
Sbjct: 84 E----TDYVPEGAIVIFSAHGVAPTVYAAAAERNLRTIDATCPLVTKVHNEVKRFARNDY 139
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE +ATA A ++ + ++G ++ ++ +
Sbjct: 140 DILLIGHEGHEEVIATAGEAPTHVQL-----------------VDGLAAVQQVVVR---- 178
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
D KV +QTT+ +E ++VE+ R +++ + IC
Sbjct: 179 ----------DENKVVWLSQTTL---SVDETMRIVERLRQRFPKLQDPPS-----DDICY 220
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNK 312
ATQ RQ A+ M E +L++V VE+A G +Y +D K I P
Sbjct: 221 ATQNRQVAVKAMAPE-CELVIVVGSRNSSNSVRLVEVAMGSGAGAAYLVDWAKDIDPA-- 277
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL G T+G+TSGAS PD V+ VLK
Sbjct: 278 ---------------WL-AGVTTVGVTSGASVPDILVQGVLK 303
>gi|449106999|ref|ZP_21743659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ASLM]
gi|451968696|ref|ZP_21921925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola US-Trep]
gi|448963624|gb|EMB44301.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ASLM]
gi|451702709|gb|EMD57111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola US-Trep]
Length = 289
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 151/347 (43%), Gaps = 76/347 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K ++ +IHNP+ RL++M V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKLAKENTENKSGLYTFGPLIHNPSTMLRLKQMGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTEDEDY--KDSVIVIRAHGIPPSKKDELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A G+ +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGRCLIVQNAEEAALI-DLPSSLCANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKDSEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+Y + +G+T+GASTPD +++V KK+ E
Sbjct: 260 IFSYSV------------------VGLTAGASTPDFIIDEVEKKLLE 288
>gi|298735947|ref|YP_003728472.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B8]
gi|308183157|ref|YP_003927284.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan4]
gi|298355136|emb|CBI66008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B8]
gi|308065342|gb|ADO07234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan4]
Length = 274
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|8928200|sp|Q9X781.2|ISPH_MYCLE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Length = 332
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 78/342 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ + +++ +++ +EI+HN V + LE + VE
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERSLRKY-GPPVYVRHEIVHNRHVVETLERAGA--VFVE 80
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +V+ A G A +N++ +D TCP V+KV V++ + DY
Sbjct: 81 E----TDYVPEGAIVIFSAHGVAPTVYAAAAERNLRTIDATCPLVTKVHNEVKRFARNDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE +ATA A ++ + ++G ++ ++ +
Sbjct: 137 DILLIGHEGHEEVIATAGEAPTHVQL-----------------VDGLAAVQQVVVR---- 175
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
D KV +QTT+ +E ++VE+ R +++ + IC
Sbjct: 176 ----------DENKVVWLSQTTL---SVDETMRIVERLRQRFPKLQDPPS-----DDICY 217
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNK 312
ATQ RQ A+ M E +L++V VE+A G +Y +D K I P
Sbjct: 218 ATQNRQVAVKAMAPE-CELVIVVGSRNSSNSVRLVEVAMGSGAGAAYLVDWAKDIDPA-- 274
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL G T+G+TSGAS PD V+ VLK
Sbjct: 275 ---------------WL-AGVTTVGVTSGASVPDILVQGVLK 300
>gi|357018876|ref|ZP_09081136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356481197|gb|EHI14305.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 334
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+ +V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + I
Sbjct: 21 GDRRVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVETLAKAGA--I 77
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G++VV A G A V +N++++D TCP V+KV ++ +
Sbjct: 78 FVDE----TDEVPEGEIVVFSAHGVAPSVHVNAAERNLKVIDATCPLVTKVHNEAKRFAR 133
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE + TA A ++ + + EA D + + N
Sbjct: 134 DDYDILLIGHEGHEEVIGTAGEAPDHVQIVDGPEA---VDKVTVRDEN------------ 178
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
KV +QTT+ ET EI V+ + E F
Sbjct: 179 ----------------KVIWLSQTTLSVDETMEI-------------VQKLRERFPKLQD 209
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC ATQ RQ A+ M E +L++VV A S + E +G G A+ +
Sbjct: 210 PPSDDICYATQNRQVAVKAMAPE-CELVIVVGSANSSN--SVRL-VEVALGAGADAAHLV 265
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ + ++ + WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 266 DYADDIDPQ-WL-EGVTTVGVTSGASVPEILVRGVLERLAE 304
>gi|319790656|ref|YP_004152289.1| hydroxymethylbutenyl pyrophosphate reductase [Thermovibrio
ammonificans HB-1]
gi|317115158|gb|ADU97648.1| hydroxymethylbutenyl pyrophosphate reductase [Thermovibrio
ammonificans HB-1]
Length = 295
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 156/355 (43%), Gaps = 85/355 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+S GFCWGV+RAV +A EA ++ + + + E+IHN +RL ++ + I
Sbjct: 1 MEIKVAKSAGFCWGVKRAVNMAVEALEK--DGRAYCLGELIHNRREIERLRKLGMDFI-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V KGD VV+ + G A + L + ++VD TCP+V V K ++
Sbjct: 57 ----EDMDAVKKGDTVVIRSHGVAPSVIEFLKGRGARVVDATCPFVKDVHEKAMKLEREG 112
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G H E + A + II ++E E
Sbjct: 113 YPVLILGNPKHPEVIGIAGHLKEPIIASTVEEVE-------------------------- 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A+ K + ++G+ QTT+ L E I L K K +NTI
Sbjct: 147 -ALPK-------MPRLGVVCQTTLNLNFFKEAISLLALKVKELKV-----------YNTI 187
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT RQ K+ + VD++L++ +I++ SY ++S+ I P
Sbjct: 188 CSATSIRQRETRKLAGQ-VDVMLIIGGKNSSNTTKLYQISKSVNPRSYHVESKDEIDPA- 245
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
W +G ++GIT+GASTP +++V++ V ++ + L
Sbjct: 246 ----------------WF-EGAKSVGITAGASTPAWVIDEVVQFVKDLGKGGVLS 283
>gi|385249512|ref|YP_005777731.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F57]
gi|420395093|ref|ZP_14894323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1124]
gi|420401451|ref|ZP_14900646.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6081]
gi|420403854|ref|ZP_14903039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6261]
gi|317182307|dbj|BAJ60091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F57]
gi|393015365|gb|EJB16532.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1124]
gi|393018726|gb|EJB19872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6261]
gi|393019562|gb|EJB20704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6081]
Length = 274
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|289209712|ref|YP_003461778.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio sp.
K90mix]
gi|288945343|gb|ADC73042.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio sp.
K90mix]
Length = 316
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 83/347 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+++V+LA GFC GVERA++I A + + +++ +E++HN V RLE V+ +
Sbjct: 2 SMQVQLANPRGFCAGVERAIEIVERALEIY-GAPLYVRHEVVHNRHVVGRLEAAGVKFV- 59
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ D V G VV+ A G N+ + + D TCP V+KV V ++ +
Sbjct: 60 -----EELDEVPDGQVVIFSAHGVPKRVQQEAENRGLTVFDATCPLVTKVHLEVARYARE 114
Query: 144 DYTSIIHGKYSHEETVATA-----SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
++ G H E T + G+ ++V+ +K+ + G E+
Sbjct: 115 GREVVLIGHAGHPEVEGTLGQFDDTQGGRMMLVETVKD-------VAGLEVA-------- 159
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
+PD ++ +QTT+ +T EI + + G ++
Sbjct: 160 -------------NPD----RLAFVSQTTLSMDDTAEIIDALTARFPKIEGPRKMD---- 198
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + ++ DL+LVV EI G+ SY +D
Sbjct: 199 ----ICYATQNRQDAV-KDLAKQCDLLLVVGSKNSSNSNRLSEIGARLGVESYLVDGAAD 253
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ P WL KG+ IG+T+GAS P+ V +VL
Sbjct: 254 VDPA-----------------WL-KGKQRIGVTAGASAPEVLVNEVL 282
>gi|420475652|ref|ZP_14974322.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-21]
gi|393092155|gb|EJB92779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-21]
Length = 274
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 155/339 (45%), Gaps = 69/339 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT Q A + +E VD+++VV I +++ K +Y LVE
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLIIAKQHC----KDSY------LVE 235
Query: 325 KENWLP----KGQITIGITSGASTPDKAVEDVLKKVFEI 359
EN L K + GIT+GASTPD +E+V +K+ I
Sbjct: 236 DENELELAWFKDKRLCGITAGASTPDWIIENVKQKISTI 274
>gi|118616061|ref|YP_904393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
ulcerans Agy99]
gi|166217175|sp|A0PKQ3.1|ISPH_MYCUA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|118568171|gb|ABL02922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium ulcerans Agy99]
Length = 332
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 153/339 (45%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V L + + V
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +G +VV A G A +N+Q +D TCP V+KV + + D
Sbjct: 80 EE----TDQVPEGAIVVFSAHGVAPTVYAAAAERNLQTIDATCPLVTKVHNEARRFARND 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A +++ ++ G L+ +
Sbjct: 136 YDILLIGHEGHEEVVGTAGEAPEHV-------------QLVDG------------LDGVE 170
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+ + D KV +QTT+ ET EI V + + F
Sbjct: 171 RVTIRDED------KVVWLSQTTLSVDETMEI-------------VARLRQRFAKLQDPP 211
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ M E DL+LVV R + E +G G + AY +
Sbjct: 212 SDDICYATQNRQVAVKAMAPE-CDLVLVV---GSRNSSNSVRLVEVALGAGAEAAYLVDW 267
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ ++WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 268 ADDID-QSWL-QGVTTVGVTSGASVPEVLVRGVLERLAE 304
>gi|404495725|ref|YP_006719831.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
metallireducens GS-15]
gi|418066371|ref|ZP_12703735.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
metallireducens RCH3]
gi|123572476|sp|Q39XB6.1|ISPH_GEOMG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78193341|gb|ABB31108.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
metallireducens GS-15]
gi|373560632|gb|EHP86889.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
metallireducens RCH3]
Length = 282
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 153/344 (44%), Gaps = 85/344 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC+GV+RA Q+A+EA ++ E K + IIH+P V RLEEM V+ +
Sbjct: 5 LAKRAGFCFGVKRATQMAFEAAEK--EGKTYSLGPIIHSPQVVHRLEEMGVKVL------ 56
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
K + G ++V + G EE+ K +++VD TCP+V K +V+ + Y +
Sbjct: 57 KGLGEITDGTIIVR-SHGVTSEELEEAVRKELEVVDATCPFVKKAQENVQNLSEAGYEVV 115
Query: 149 IHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G H E S+A GK +V + +EA A L K KK
Sbjct: 116 VVGDADHPEVQGIVSYAKGKVCVVGSEEEA--------------------ARLPKMKK-- 153
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
+GI QTT ++ + K V +RK G E FNTICDAT
Sbjct: 154 ------------IGIVAQTT----QSFDNLKHVVLECLRK-GAE-----IRIFNTICDAT 191
Query: 268 QERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAY 315
RQ + VD ++V+ E+ + ++ I++ + I P
Sbjct: 192 AVRQQEATALAR-TVDCMIVIGGYNSANTKRLAEVCAELQPRTHQIETAQEINPA----- 245
Query: 316 KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W +G +G+T+GASTP +++V++++ EI
Sbjct: 246 ------------WF-EGVAKVGVTAGASTPKWLIDEVIERIREI 276
>gi|425789596|ref|YP_007017516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik117]
gi|425627911|gb|AFX91379.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik117]
Length = 274
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISAI 274
>gi|171464045|ref|YP_001798158.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193583|gb|ACB44544.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 313
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 151/347 (43%), Gaps = 77/347 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ +A+ GFC GV+RA+ I EA +F I++ +EI+HN V L + +
Sbjct: 6 NAEILMAQPRGFCAGVDRAINIVNEALNRF-GGPIYVRHEIVHNVYVVNELRDKGAVFV- 63
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ V KG +VV A G + E + Q+ D TCP V+KV V K K
Sbjct: 64 -----DELHEVPKGGIVVFSAHGVSQEVRKDAEARGFQVYDATCPLVTKVHLEVVKMCKE 118
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+T ++ G H E T + +KE + +E+
Sbjct: 119 GFTVLMIGHAGHPEVEGT---------MGQVKEGVF-------------------LIERV 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ F D KV QTT+ ET+EI + + +KF N+ + I
Sbjct: 151 GDVSALPFPTD---EKVAFVTQTTLSVDETKEI----VEALTKKF--PNIVQP--RKQDI 199
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + +V++++VV E+AE G+P+Y +DS +++ P
Sbjct: 200 CYATQNRQDAV-KFMAPQVEVVIVVGSTTSSNSNRLRELAEKLGVPAYMVDSPEQLKP-- 256
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
W G+ +G+T+GAS P+ + ++ ++ E
Sbjct: 257 ---------------EWF-AGKKRVGLTAGASAPESLAQSIVSRIQE 287
>gi|256831986|ref|YP_003160713.1| hydroxymethylbutenyl pyrophosphate reductase [Jonesia denitrificans
DSM 20603]
gi|256685517|gb|ACV08410.1| hydroxymethylbutenyl pyrophosphate reductase [Jonesia denitrificans
DSM 20603]
Length = 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 144/347 (41%), Gaps = 88/347 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV IA E + +++ EI+HN V + L + +
Sbjct: 37 RVLLAAPRGYCAGVDRAV-IAVEKALEVHGAPVYVRKEIVHNKFVVETLTDRGAIFV--- 92
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV A G + + + +N+Q +D TCP V+KV + DY
Sbjct: 93 ---NETDEVPEGARVVFSAHGVSPAVVASAQQRNLQTIDATCPLVTKVHKEAVRFASDDY 149
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A +I V N ++ K
Sbjct: 150 DILLIGHDGHEEVEGTAGEAPDHIQVVNSP-------------------------DEVDK 184
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V + DPD KV +QTT+ ET E V + E F +
Sbjct: 185 VVVR--DPD----KVVWISQTTLSVDETMET-------------VRRLRERFPTLQDPPS 225
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI-PSYWIDSEKRI 307
+ IC ATQ RQ AM K+ DL+LVV E+A D G SY ID K I
Sbjct: 226 DDICYATQNRQVAMKKLAPH-CDLVLVVGSTNSSNSVRLTEVALDAGARASYLIDYAKEI 284
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL G T+G++SGAS P+ V+DVLK
Sbjct: 285 -----------------DETWL-DGVETVGLSSGASVPEILVQDVLK 313
>gi|384898699|ref|YP_005774078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F30]
gi|385225709|ref|YP_005785634.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 83]
gi|317178642|dbj|BAJ56430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F30]
gi|332673855|gb|AEE70672.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 83]
Length = 274
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|386747551|ref|YP_006220759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 99-5656]
gi|384553793|gb|AFI05549.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 99-5656]
Length = 274
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 85/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + E I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEK------NENSLIFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ ++K V++ G +++ L NK ++I D TCP+V K VE K
Sbjct: 53 EEDPKK---ISKDKSVIIRTHGIPKQDLEYLKNKGIKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQTLV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + +E E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLIERCPEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSHNQKAALDLSKE-VDIMIVVGGKASSNTKQLLNIAKQHCKDSYLVEDESEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K W K + GIT+GASTPD +E+V +KV
Sbjct: 241 ------------KIEWF-KDKTLCGITAGASTPDWIIENVKQKV 271
>gi|420407223|ref|ZP_14906392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6311]
gi|393022557|gb|EJB23678.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6311]
Length = 274
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGRTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KGKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|222055456|ref|YP_002537818.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter daltonii
FRC-32]
gi|254806907|sp|B9LZG4.1|ISPH_GEOSF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|221564745|gb|ACM20717.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter daltonii
FRC-32]
Length = 282
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 67/343 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC+GV+RA QIA+EA + K + IIH+P V ++LEEM V+ +
Sbjct: 1 MKIILAKQAGFCFGVKRATQIAFEAAGKGG--KTFTLGPIIHSPQVVQKLEEMGVKALEN 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
G + +++ + GAA +E+ K + I+D TCP+V K V+
Sbjct: 59 VAGMDE-------GTIIIRSHGAASDELEEAVRKQLDILDATCPFVKKAQEHVKNLSNSG 111
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G H E S+A GK +V + +EA K
Sbjct: 112 YDVVVVGDADHPEVQGIVSYATGKVYVVASGEEA-----------------------VKL 148
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K + K+G+ QTT E + +V+ +++ + F+TI
Sbjct: 149 PK-----------MGKIGVVAQTTQ---SFENLRHVVDACLVKGGEIR-------VFHTI 187
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGEL 322
CDAT RQ+ K+ + VD ++V I Y + KR+ +I + H E+
Sbjct: 188 CDATAVRQEEAKKLASQ-VDCMVV--------IGGYNSANTKRLAEVSAEIQPRTHHIEM 238
Query: 323 VEKEN--WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
++ + W +G +GIT+GASTP +++VL+++ I +++
Sbjct: 239 AQQLDPAWF-EGVKIVGITAGASTPKWIIDEVLEQIESIAKDK 280
>gi|189485664|ref|YP_001956605.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [uncultured
Termite group 1 bacterium phylotype Rs-D17]
gi|170287623|dbj|BAG14144.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [uncultured
Termite group 1 bacterium phylotype Rs-D17]
Length = 300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 76/353 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+AE+ GFC+GV RA+ + + + E K++ +IHNP KRLE+ ++ +
Sbjct: 7 LRVKIAENAGFCFGVRRAIDLTEKTAGK--ERKVYTLGPVIHNPQEVKRLEKKGIKTL-- 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL-NNKNVQIVDTTCPWVSKVWTSVEKH--- 140
++ KK K ++L G L NKN+ ++D CP+V + ++++
Sbjct: 63 KDPKKV-----KSGSIILRTHGIPCNLHKKLEENKNINVIDAACPFVKRAQNTIKRLSTD 117
Query: 141 -KKGDYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K D T I+ G+ H E +A S+ +GK IIV+N+KEA+ + G+LN
Sbjct: 118 IKSKDKTIIVVGEKIHPEVIALVSYGSGKCIIVENIKEAQ---KFRGRGDLN-------- 166
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
I +QTT I K+++K K
Sbjct: 167 -----------------------IVSQTTQTPENFNSIIKVLKKRYKTKV---------- 193
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYW--IDSEKRIGPGNKIAYK 316
+NTIC AT +RQ A K+ + VDL++V+ ++ G + I SEK K
Sbjct: 194 -YNTICKATLDRQKAAEKLAKN-VDLMIVIG-GKNSGNTTRLAQICSEK---------TK 241
Query: 317 LMHGELVE--KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
H E KE W K ++G+T+GASTPD ++++ ++ E+ + L+
Sbjct: 242 TYHIETACSIKEKWF-KNINSVGLTAGASTPDWIIKEIEMRIKEVGAKHYLEF 293
>gi|449130857|ref|ZP_21767076.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP37]
gi|448941897|gb|EMB22797.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP37]
Length = 289
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 149/347 (42%), Gaps = 76/347 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKI--WITNEIIHNPTVNKRLEEMAVQNIPV 84
VK AE G+C GV RAV + K+ E K+ + +IHNP+ RL++ V+ I
Sbjct: 3 VKRAEVLGYCSGVRRAVDTVLKIAKENTENKLGLYTFGPLIHNPSTMLRLKQTGVKTIDT 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D K V+V+ A G + L +++D TC V +KH +
Sbjct: 63 ENFTGDEDY--KDSVIVIRAHGIPPSKKSELEKSGAKVIDATCSRVKASQALAKKHSEEA 120
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G +H E ++ A +A G+ +IV+N +EA + D NGS+
Sbjct: 121 FV-ILAGDKNHGELISIAGYAEGRCLIVQNAEEAALI-DLPSSLRANGSA---------- 168
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V IA QTT+ E E I ++K + FNTI
Sbjct: 169 ----------------VLIA-QTTIKDSEYEAIASALKKRI----------SDLKVFNTI 201
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT +RQ A+ K+ E VD +LV+ + A D PS+ I+ I P
Sbjct: 202 CPATYDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPSWLIEDASEI-PKE 259
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+Y + +G+T+GASTPD +++V KK+ E
Sbjct: 260 IFSYSV------------------VGLTAGASTPDFIIDEVEKKLLE 288
>gi|291276297|ref|YP_003516069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
mustelae 12198]
gi|290963491|emb|CBG39321.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB
[Helicobacter mustelae 12198]
Length = 274
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 91/350 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+++KLA+ YGFC+GV+RA+++A ++ P + +IHNP KRLE+ + ++N
Sbjct: 1 MQIKLAKKYGFCFGVKRAIKLAEKS----PGAITF--GPLIHNPREIKRLEDGFGVRIEN 54
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ + V +G V++ G +++ L +KN +I D TCP+V K E
Sbjct: 55 --------KTENVFEGQSVIIRTHGITKQDLEILKSKNTKITDATCPFVIKPQQIAESMS 106
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
K Y +I G SH E S+A IV N E Y D LG
Sbjct: 107 KEGYCIVIFGDASHPEIQGVMSYAVSEPIVVNTLEGLY--DKTLGK-------------- 150
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
KV + +QT T+++ K +E + + ++N E I FN
Sbjct: 151 -----------------KVALISQT------TKQMKKFLE---IANYLMQNCYETRI-FN 183
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC+AT + Q+A+ ++ +E VD+++VV IA+ SY ++ E+ +
Sbjct: 184 TICNATFDNQEAVKELSQE-VDIMIVVGGKTSSNTKQLLTIAQMYCKDSYLVEDERDL-- 240
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
K W G+ GIT+GASTPD +E V K+ +I
Sbjct: 241 ---------------KMQWFA-GKKICGITAGASTPDWIIERVQDKIAQI 274
>gi|304316815|ref|YP_003851960.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778317|gb|ADL68876.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 286
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 59/340 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC+GV+RAV++AY+ + + + E+IHNP V + LE+ ++ I
Sbjct: 1 MKILIADNAGFCFGVKRAVKVAYDQINRDDNRRTYTYGELIHNPQVVRDLEDKGIKTI-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+G D + + D +++ G + L K ++++D TCP+V +V V + K
Sbjct: 59 -DG---IDNLKENDRIIIRTHGIPEKTYKDLKEKKIELIDMTCPFVKRVQKIVNGYYKKG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
YT +I G +H E + +NG +E
Sbjct: 115 YTIVIIGDKNHPEVIG----------------------------VNGWCDNSAYVIESVN 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P +D K + QTT+ + E+ L++ VNE +SFNTIC
Sbjct: 147 DV---QLLPYID--KACVVAQTTITQKMWEDSLNLLKLK---------VNE-LVSFNTIC 191
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGELV 323
DAT +RQ + + + +K D+++V+ G S KRI N K ++ + + +
Sbjct: 192 DATNKRQSSAEE-ISKKADVMIVIG-----GKNSSNTQKLKRICEKNCKRTIQVENADEI 245
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ + +GIT+GASTPD +++V+ K+ I R+E
Sbjct: 246 DLS--IFNDNDIVGITAGASTPDYLIQEVINKI-AINRKE 282
>gi|300855310|ref|YP_003780294.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
ljungdahlii DSM 13528]
gi|300435425|gb|ADK15192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
ljungdahlii DSM 13528]
Length = 637
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 57/336 (16%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC+GV+RAV + + +K+F +KI+ +IHN V +L+E + I ++
Sbjct: 5 LADKSGFCFGVKRAVDESLKVQKKF-NKKIYTLGPLIHNSDVVNKLKEKGIYPIEID--- 60
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
D + + DVV++ + G + TL NK + IV+ TCP+V + V+++ K Y+ +
Sbjct: 61 -NLDNLREDDVVIIRSHGVPEKIFFTLKNKKINIVNATCPYVLNIQRKVQEYYKLGYSIL 119
Query: 149 IHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
I G +H E + + K +I K +G++ LEK
Sbjct: 120 IVGDKNHPEVIGINGWCENKALISK-----------------DGTN------LEKLPS-- 154
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
K+ I +QTT + E++ +V K + FI+FNTIC AT
Sbjct: 155 -----------KLCIVSQTTEKQSNWEKVLSIVTKNC----------KEFIAFNTICSAT 193
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
+ RQ A + +E VD+++V+ + E N Y GE+ + +
Sbjct: 194 EFRQKAAADISKE-VDMMVVIGGKNSSNTTKLY---EICKDNCNNTIYVENSGEIPDDIS 249
Query: 328 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
K + TIG+T+GASTPD +++ + K+ + K E
Sbjct: 250 NCNKIK-TIGVTAGASTPDWIIKEAILKMSDDKNLE 284
>gi|336324077|ref|YP_004604044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Flexistipes
sinusarabici DSM 4947]
gi|336107658|gb|AEI15476.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Flexistipes
sinusarabici DSM 4947]
Length = 284
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 148/341 (43%), Gaps = 70/341 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC+GVERA+ I E + ++ + IIHNP V K+ E+ V V
Sbjct: 1 MKIYLADYAGFCFGVERAINIVKE--QSHIKDNVRTLGPIIHNPQVVKQFEDNGVL---V 55
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D + VVL + G L NV I+D TCP+V+K K
Sbjct: 56 ERDAGKLDSSHS---VVLRSHGITKSTYEKLKKNNVDIIDATCPFVNKAHEEAAKLSGDG 112
Query: 145 YTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G+ H E S+ GKY I+ + K+ E V
Sbjct: 113 YDVVVLGEADHPEVKGIVSYIKGKYHIISDEKDIENV----------------------- 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
D+D KVG+ QTT + + KL+E T ++ V NTI
Sbjct: 150 ----------DLD-SKVGLIAQTTQDREVFNRVRKLLE-TRAKELKV---------VNTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL- 322
C+AT RQ A K+ + VDL+LV+ ++ G + KI +L
Sbjct: 189 CNATNLRQHAAKKLAKS-VDLMLVIG-GKNSGNTTRLF----------KICRELCANTYH 236
Query: 323 VEKENWLPKGQI----TIGITSGASTPDKAVEDVLKKVFEI 359
+E L K IGIT+GASTPD +E+VL+ + E+
Sbjct: 237 IETAGELTKDMFDNVENIGITAGASTPDFLIEEVLEYINEV 277
>gi|152990411|ref|YP_001356133.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitratiruptor
sp. SB155-2]
gi|166217469|sp|A6Q2R7.1|ISPH_NITSB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|151422272|dbj|BAF69776.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitratiruptor
sp. SB155-2]
Length = 275
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 86/348 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA+SYGFC+GV+RA++IA E+ P + +IHN RL+E N+ +
Sbjct: 1 MEIRLAKSYGFCFGVKRAIKIAEES----PNSVTF--GPLIHNKNEIDRLKEK--YNVEL 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D + + VV+ G E++ L KNV+++D TCP+V+K V K +
Sbjct: 53 VE---EIDEIQENSRVVIRTHGIPKEKLALLKEKNVEVIDATCPFVTKPQEIVSKMSEEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y+ +I G +H E S+A I+V +++E E KE
Sbjct: 110 YSIVIFGDINHPEIKGVMSYATDPIVVLSVEELE-------------GKPLKE------- 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV QTT + EE K+V M K V FNTIC
Sbjct: 150 --------------KVATVAQTTR---KFEEYQKIVNYLMEHKKEVR-------VFNTIC 185
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT E QDA ++ E D+++++ +I ++ SY +++ K +
Sbjct: 186 NATFENQDAARELSRE-ADIMIIIGGKNSSNTKQLFKICKENCPDSYLVENAKEL----- 239
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
EKE W +G+ GIT+GASTP+ +E+V++ + +I+
Sbjct: 240 -----------EKE-WF-EGKKVCGITAGASTPNWIIEEVIENIKKIQ 274
>gi|88813003|ref|ZP_01128246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
gi|88789781|gb|EAR20905.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
Length = 325
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 71/345 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA GFC GVERA+ I +A + F I++ +E++HN +V L + +
Sbjct: 3 RILLANPRGFCAGVERAISIVEKALEAF-GAPIYVRHEVVHNRSVVDDLRRKGARFV--- 58
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
++ V G V+ A G + + +++ D TCP V+KV V+KH +
Sbjct: 59 ---EELSEVPDGSTVIFSAHGVSKAVRAEAAQRGLRVFDATCPLVTKVHIEVQKHAREGR 115
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E T G+Y K AE Y++ G E +
Sbjct: 116 EVILIGHDGHPEVAGT---IGQY----EGKGAERGAIYLVQGP------------EDVES 156
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
+ D DL V +QTT+ + + V + ++F + H + + IC
Sbjct: 157 LTVRNAD---DLAYV---SQTTLSMDDAAQ----VIAALRQRF----PDIHGPTRDDICY 202
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ + + VD+++VV E+AE G+P+Y ID+ +
Sbjct: 203 ATQNRQDAVMGLARQ-VDVMIVVGSGNSSNTRRLRELAERIGVPAYQIDTAADL------ 255
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G+ IGIT+GAS P+ V+ V+ ++ E
Sbjct: 256 -----------DRRWL-EGREVIGITAGASAPEILVQGVVDRLIE 288
>gi|440781995|ref|ZP_20960223.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium pasteurianum DSM 525]
gi|440220713|gb|ELP59920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium pasteurianum DSM 525]
Length = 643
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 55/342 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
K+ LA++ GFC+GV+RAV IA R+Q+ ++I+ ++IHN V K LE + + +
Sbjct: 3 KIILADNAGFCFGVKRAVDIAISTKREQYKNKRIYTLGQLIHNNDVVKYLESKNIHAVDI 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K D ++ D++++ + G + + + L +KN+ IVD TCP+V+ + V+++
Sbjct: 63 ----KDIDKLSNNDIIIIRSHGISQDIIELLKSKNLNIVDATCPYVANIHKKVKEYSNRG 118
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E + + CD +A + K
Sbjct: 119 YQIVIVGDKNHPEVIGINGW----------------CD-------------NKAIISK-- 147
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KG + D KV + QTT + +++ K+V + E I FNTIC
Sbjct: 148 ----KGENLDNISGKVCLVAQTTEKQENWQKVLKIVSERA----------EEIIPFNTIC 193
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT+ RQ ++ +E ++VV + + KR N I + GE+ +
Sbjct: 194 NATEVRQKKADELSKEA--QVIVVLGGHHSSNTTKLFEICKR-NCENTIHVE-NSGEIPD 249
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
E + K I IG+ +GASTPD +++ + K+ + ++ E +
Sbjct: 250 -ELYKGKDNIIIGVAAGASTPDWIIKEAINKMSDEQKLEGMN 290
>gi|289548086|ref|YP_003473074.1| hydroxymethylbutenyl pyrophosphate reductase [Thermocrinis albus
DSM 14484]
gi|289181703|gb|ADC88947.1| hydroxymethylbutenyl pyrophosphate reductase [Thermocrinis albus
DSM 14484]
Length = 286
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 60/339 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPE-EKIWITNEIIHNPTVNKRLEEMAVQNIP 83
V++ +A GFC+GV RA+ IA +A E +++ +IHNP RL V+ +
Sbjct: 2 VEILIAPHAGFCFGVRRAINIAEKASLLTQEGRRVFTMGPLIHNPQEVDRLRGKGVEVLS 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+G ++ GDVV++ + G + L K + I+D TCP+V V +V + K
Sbjct: 62 SADGLRE------GDVVIVRSHGIPPKRERELRRKGLTIMDATCPYVKAVHEAVTQLAKE 115
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G+ H E V T + ++EA GGE KE E
Sbjct: 116 GYFVVIVGEKDHPEVVGTLGY---------LEEA--------GGE-GAVVERKEDLREVL 157
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNT 262
K +VG+ QTT + +E+ G+L +++ V NT
Sbjct: 158 GKE------------RVGVVAQTTQNEAFFKEVVGELC--LWVKELKV---------INT 194
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC+AT ERQ+ +Y++ E VD+++VV + G + P + H EL
Sbjct: 195 ICNATSERQEDVYQLAPE-VDVMIVVG-GRNSGNTRRLYQISLSLNP------RTYHVEL 246
Query: 323 VE--KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ + +W KG +G+T+GASTPD ++ V++K+ E+
Sbjct: 247 PDELQPDWF-KGVKRVGVTAGASTPDWIIQGVVEKIREL 284
>gi|399889650|ref|ZP_10775527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium arbusti SL206]
Length = 641
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 65/336 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA+S GFC+GV+RAV IA K+ + KI+ ++IHN V K L++ + I +
Sbjct: 3 KIILAKSAGFCFGVKRAVDIAISIEKE-KKNKIYTLGQLIHNNDVVKYLKDNNIHAIDI- 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
K D++NK D +++ + G + + + L K + IV+ TCP+VSK+ V+K+ + Y
Sbjct: 61 ---KDVDLLNKTDTIIIRSHGVSPDIIKLLEEKELSIVNATCPFVSKIHEKVKKYSEDGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G H E + + G K
Sbjct: 118 KIVIVGDKEHPEIIGINGWCGN-------------------------------------K 140
Query: 206 AVSKGFDPDVDLV--KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A+ F ++D V K+ + QTT E +E + V +++K ++ ++FNTI
Sbjct: 141 AIISKFGENLDDVYGKICLVAQTT----EKQENWEKVLSILLKK------SKDIVTFNTI 190
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWI---DSEKRIGPGNKIAYKLMHG 320
C AT+ RQ ++ + ++++ Y I + E I N G
Sbjct: 191 CSATERRQKKAEELAKISDAMVVIGGHHSSNTTKLYEICKSNCENTIHVENS-------G 243
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
E+ + E + K I IG+ +GASTPD +++ + K+
Sbjct: 244 EIPD-ELYKGKDNIRIGVAAGASTPDWIIKEAMNKM 278
>gi|336434826|ref|ZP_08614546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336003536|gb|EGN33619.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 284
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 150/334 (44%), Gaps = 56/334 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV A++ GFC+GVERAV YE + E I+ IIHN V K LE+ V +
Sbjct: 1 MKVITAKTAGFCFGVERAVNTVYEQIEAHKGEAIYTYGPIIHNDEVIKDLEKKGVTVLRT 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D VV++ + G LN K + IVD TCP+V K+ VEK
Sbjct: 61 EEELEHLD----AGVVIIRSHGVEKRIYEKLNEKGITIVDATCPFVKKIHQIVEKESALG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ +I G +H E +AG ++ +V+N +EA+
Sbjct: 117 HEIVIIGNPAHPEVQGIRGWAGAHVSVVQNKEEAD------------------------- 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K + G KV + +QTT + LVE + + + NV NTI
Sbjct: 152 KFSAEGG-------AKVCVVSQTTF---NYNKFKDLVEIISEKSYDI-NV------LNTI 194
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT+ERQ A + + E VD ++V+ + +++K K + + +
Sbjct: 195 CNATKERQ-AEAREIAESVDAMIVIGDKQSS-------NTQKLFEICAKACNDTYYIQTL 246
Query: 324 EKENWLPKGQI-TIGITSGASTPDKAVEDVLKKV 356
+ N G + T+GIT+GASTP+ +E+V V
Sbjct: 247 DDLNVNQLGSVETVGITAGASTPNNIIEEVQNNV 280
>gi|385217755|ref|YP_005779231.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F16]
gi|317177804|dbj|BAJ55593.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F16]
Length = 274
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A++YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKNYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EENPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|15840547|ref|NP_335584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CDC1551]
gi|13880725|gb|AAK45398.1| lytB protein [Mycobacterium tuberculosis CDC1551]
Length = 329
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A +K P +++ +EI+HN V L + + V
Sbjct: 21 RVLLAEPRGYCAGVDRAVETVERALQKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 76
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ V +G +VV A G A V+ + +N+Q++D TCP V+KV + + D
Sbjct: 77 EETEQ----VPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDD 132
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G + + +
Sbjct: 133 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVDAVDQVTVRDED 175
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K V +QTT+ ET EI G+L R+F + I
Sbjct: 176 KVV--------------WLSQTTLSVDETMEIVGRL-----RRRFP----KLQDPPSDDI 212
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E +L++VV R + E +G G + A+ + + +
Sbjct: 213 CYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDWADDI 268
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 269 DSA-WL-DGVTTVGVTSGASVPEVLVRGVLERLAE 301
>gi|420505850|ref|ZP_15004365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-74]
gi|393115355|gb|EJC15865.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-74]
Length = 274
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY I+ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLIEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|31792303|ref|NP_854796.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis AF2122/97]
gi|57116829|ref|YP_177788.1| Probable LYTB-related protein LytB2 [Mycobacterium tuberculosis
H37Rv]
gi|121637041|ref|YP_977264.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148660896|ref|YP_001282419.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|148822323|ref|YP_001287077.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis F11]
gi|167969245|ref|ZP_02551522.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|224989514|ref|YP_002644201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253799850|ref|YP_003032851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN 1435]
gi|254231388|ref|ZP_04924715.1| lytB-related protein lytB2 [Mycobacterium tuberculosis C]
gi|254364017|ref|ZP_04980063.1| lytB-related protein lytB2 [Mycobacterium tuberculosis str.
Haarlem]
gi|254550108|ref|ZP_05140555.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289442540|ref|ZP_06432284.1| LytB protein [Mycobacterium tuberculosis T46]
gi|289446700|ref|ZP_06436444.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CPHL_A]
gi|289569103|ref|ZP_06449330.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T17]
gi|289573763|ref|ZP_06453990.1| lytB family protein lytB2 [Mycobacterium tuberculosis K85]
gi|289744853|ref|ZP_06504231.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 02_1987]
gi|289749646|ref|ZP_06509024.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T92]
gi|289753176|ref|ZP_06512554.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis EAS054]
gi|289757199|ref|ZP_06516577.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294993292|ref|ZP_06798983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 210]
gi|297633650|ref|ZP_06951430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN 4207]
gi|297730637|ref|ZP_06959755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN R506]
gi|298524607|ref|ZP_07012016.1| lytB-related protein lytB2 [Mycobacterium tuberculosis 94_M4241A]
gi|313657967|ref|ZP_07814847.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN V2475]
gi|339631175|ref|YP_004722817.1| LYTB-related protein LYTB2 [Mycobacterium africanum GM041182]
gi|340626124|ref|YP_004744576.1| putative LYTB-like protein LYTB2 [Mycobacterium canettii CIPT
140010059]
gi|375297090|ref|YP_005101357.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 4207]
gi|378770875|ref|YP_005170608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|383306997|ref|YP_005359808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis RGTB327]
gi|385997893|ref|YP_005916191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CTRI-2]
gi|392385812|ref|YP_005307441.1| lytB2 [Mycobacterium tuberculosis UT205]
gi|392433297|ref|YP_006474341.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 605]
gi|397672944|ref|YP_006514479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis H37Rv]
gi|424805387|ref|ZP_18230818.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis W-148]
gi|433626204|ref|YP_007259833.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140060008]
gi|433634167|ref|YP_007267794.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070017]
gi|61226764|sp|P0A5I0.1|ISPH1_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|61226766|sp|P0A5I1.1|ISPH1_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|31617891|emb|CAD94001.1| PROBABLE LYTB-RELATED PROTEIN LYTB2 [Mycobacterium bovis AF2122/97]
gi|121492688|emb|CAL71157.1| Probable lytB-related protein lytB2 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600447|gb|EAY59457.1| lytB-related protein lytB2 [Mycobacterium tuberculosis C]
gi|134149531|gb|EBA41576.1| lytB-related protein lytB2 [Mycobacterium tuberculosis str.
Haarlem]
gi|148505048|gb|ABQ72857.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|148720850|gb|ABR05475.1| lytB-related protein lytB2 [Mycobacterium tuberculosis F11]
gi|224772627|dbj|BAH25433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253321353|gb|ACT25956.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 1435]
gi|289415459|gb|EFD12699.1| LytB protein [Mycobacterium tuberculosis T46]
gi|289419658|gb|EFD16859.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CPHL_A]
gi|289538194|gb|EFD42772.1| lytB family protein lytB2 [Mycobacterium tuberculosis K85]
gi|289542857|gb|EFD46505.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T17]
gi|289685381|gb|EFD52869.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 02_1987]
gi|289690233|gb|EFD57662.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T92]
gi|289693763|gb|EFD61192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis EAS054]
gi|289712763|gb|EFD76775.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494401|gb|EFI29695.1| lytB-related protein lytB2 [Mycobacterium tuberculosis 94_M4241A]
gi|326904663|gb|EGE51596.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis W-148]
gi|328459595|gb|AEB05018.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 4207]
gi|339330531|emb|CCC26197.1| putative LYTB-related protein LYTB2 [Mycobacterium africanum
GM041182]
gi|340004314|emb|CCC43456.1| putative LYTB-related protein LYTB2 [Mycobacterium canettii CIPT
140010059]
gi|341601057|emb|CCC63729.1| probable lytB-related protein lytB2 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218939|gb|AEM99569.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CTRI-2]
gi|356593196|gb|AET18425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|378544363|emb|CCE36637.1| lytB2 [Mycobacterium tuberculosis UT205]
gi|380720950|gb|AFE16059.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis RGTB327]
gi|392054706|gb|AFM50264.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 605]
gi|395137849|gb|AFN49008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis H37Rv]
gi|432153810|emb|CCK51035.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140060008]
gi|432165760|emb|CCK63240.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070017]
gi|440580583|emb|CCG10986.1| putative LYTB-RELATED protein LYTB2 [Mycobacterium tuberculosis
7199-99]
gi|444894608|emb|CCP43863.1| Probable LYTB-related protein LytB2 [Mycobacterium tuberculosis
H37Rv]
Length = 335
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A +K P +++ +EI+HN V L + + V
Sbjct: 27 RVLLAEPRGYCAGVDRAVETVERALQKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 82
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ V +G +VV A G A V+ + +N+Q++D TCP V+KV + + D
Sbjct: 83 EETEQ----VPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDD 138
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G + + +
Sbjct: 139 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVDAVDQVTVRDED 181
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K V +QTT+ ET EI G+L R+F + I
Sbjct: 182 KVV--------------WLSQTTLSVDETMEIVGRL-----RRRFP----KLQDPPSDDI 218
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E +L++VV R + E +G G + A+ + + +
Sbjct: 219 CYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDWADDI 274
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 275 DSA-WL-DGVTTVGVTSGASVPEVLVRGVLERLAE 307
>gi|39997698|ref|NP_953649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens PCA]
gi|409913050|ref|YP_006891515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens KN400]
gi|50400913|sp|Q749Y8.1|ISPH_GEOSL RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|39984590|gb|AAR35976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens PCA]
gi|298506631|gb|ADI85354.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens KN400]
Length = 282
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 158/338 (46%), Gaps = 67/338 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA+ GFC+GV+RA Q+A+EA ++ E + + IIH+P V +RLE M V+ +
Sbjct: 1 MEIVLAKRAGFCFGVKRATQMAFEAAEK--EGETFTLGPIIHSPQVVQRLEGMGVKVLSD 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG + G V++ + G E+ + +++VD TCP+V K V++
Sbjct: 59 LEG------IGNG-TVIIRSHGVTSAELEDAVRRQLEVVDATCPFVKKAQEHVKRLSHDG 111
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
YT ++ G H E S+A G +V + +EA A L
Sbjct: 112 YTVVVVGDADHPEVQGIVSYAEGPVHVVGSGEEA--------------------ARLPNM 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K KVG+ QTT ++ E K V K + K G V FNTI
Sbjct: 152 K--------------KVGVVAQTT----QSFETLKNVVKECLLKGGEIRV------FNTI 187
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGEL 322
CDAT RQD + E VD ++V I + + KR+ +++ + H E
Sbjct: 188 CDATAVRQDEAKALARE-VDCMIV--------IGGFNSANTKRLAEVCSELQPRTYHIET 238
Query: 323 VEK--ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ +W +G +G+T+GASTP +++V++++ E
Sbjct: 239 AQELDASWF-QGVERVGVTAGASTPKWLIDEVIERIQE 275
>gi|149377779|ref|ZP_01895512.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
algicola DG893]
gi|149357951|gb|EDM46440.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
algicola DG893]
Length = 317
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 151/351 (43%), Gaps = 87/351 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA++I A F I++ +E++HN V L I V
Sbjct: 1 MQIRLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVDNLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 DE----LEEVPDDKLVIFSAHGVSQAVQNEAARRGLKVFDATCPLVTKVHLEVMKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y D+ GG++ +L + +
Sbjct: 114 RECILIGHHGHPEVEGT---MGQY-------------DHGNGGDI---------YLVEDE 148
Query: 205 KAVSKGF--DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
K V++ DP K+ QTT+ +T + ++ + E F
Sbjct: 149 KDVAELLVKDPS----KLSYVTQTTLSMDDTARV-------------IDALREKFPEIQG 191
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
N IC ATQ RQDA+ K + DL+LVV E+AE G P+Y ID
Sbjct: 192 PRKNDICYATQNRQDAV-KQLAGDCDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAA 250
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+I P WL G+ +IG+T+GAS P+ V DV+ ++
Sbjct: 251 QIDP-----------------QWL-DGKTSIGVTAGASAPEVLVNDVISRL 283
>gi|433630213|ref|YP_007263841.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070010]
gi|433641256|ref|YP_007287015.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070008]
gi|432157804|emb|CCK55086.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070008]
gi|432161806|emb|CCK59156.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070010]
Length = 335
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A +K P +++ +EI+HN V L + + V
Sbjct: 27 RVLLAEPRGYCAGVDRAVETVERALQKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 82
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ V +G +VV A G A V+ + +N+Q++D TCP V+KV + + D
Sbjct: 83 EETEQ----VPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDD 138
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G + + +
Sbjct: 139 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVDAVDQVTVRDED 181
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K V +QTT+ ET EI G+L R+F + I
Sbjct: 182 KVV--------------WLSQTTLSVDETMEIVGRL-----RRRFP----KLQDPPSDDI 218
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E +L++VV R + E +G G + A+ + + +
Sbjct: 219 CYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDWADDI 274
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 275 DPA-WL-DGVTTVGVTSGASVPEVLVRGVLERLAE 307
>gi|308231738|ref|ZP_07413603.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu001]
gi|308370061|ref|ZP_07420157.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu002]
gi|308370619|ref|ZP_07422144.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu003]
gi|308371868|ref|ZP_07426506.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu004]
gi|308373038|ref|ZP_07430815.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu005]
gi|308374215|ref|ZP_07435220.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu006]
gi|308375362|ref|ZP_07443646.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu007]
gi|308376624|ref|ZP_07439464.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu008]
gi|308377626|ref|ZP_07479841.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu009]
gi|308378837|ref|ZP_07484028.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu010]
gi|308379976|ref|ZP_07488265.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu011]
gi|308398684|ref|ZP_07492773.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu012]
gi|385990551|ref|YP_005908849.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5180]
gi|385994150|ref|YP_005912448.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5079]
gi|422812090|ref|ZP_16860478.1| lytB-like protein lytB2 [Mycobacterium tuberculosis CDC1551A]
gi|424946853|ref|ZP_18362549.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis NCGM2209]
gi|449063170|ref|YP_007430253.1| lytB-related protein lytB2 [Mycobacterium bovis BCG str. Korea
1168P]
gi|308216200|gb|EFO75599.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu001]
gi|308325459|gb|EFP14310.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu002]
gi|308331386|gb|EFP20237.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu003]
gi|308335198|gb|EFP24049.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu004]
gi|308339004|gb|EFP27855.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu005]
gi|308342674|gb|EFP31525.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu006]
gi|308346560|gb|EFP35411.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu007]
gi|308350480|gb|EFP39331.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu008]
gi|308355131|gb|EFP43982.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu009]
gi|308359084|gb|EFP47935.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu010]
gi|308363006|gb|EFP51857.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu011]
gi|308366654|gb|EFP55505.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu012]
gi|323720391|gb|EGB29485.1| lytB-like protein lytB2 [Mycobacterium tuberculosis CDC1551A]
gi|339294104|gb|AEJ46215.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5079]
gi|339297744|gb|AEJ49854.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5180]
gi|358231368|dbj|GAA44860.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis NCGM2209]
gi|379027313|dbj|BAL65046.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|449031678|gb|AGE67105.1| lytB-related protein lytB2 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 344
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A +K P +++ +EI+HN V L + + V
Sbjct: 36 RVLLAEPRGYCAGVDRAVETVERALQKHGP--PVYVRHEIVHNRHVVDTLAKAGA--VFV 91
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ V +G +VV A G A V+ + +N+Q++D TCP V+KV + + D
Sbjct: 92 EETEQ----VPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDD 147
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G + + +
Sbjct: 148 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVDAVDQVTVRDED 190
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K V +QTT+ ET EI G+L R+F + I
Sbjct: 191 KVV--------------WLSQTTLSVDETMEIVGRL-----RRRFP----KLQDPPSDDI 227
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E +L++VV R + E +G G + A+ + + +
Sbjct: 228 CYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDWADDI 283
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 284 DSA-WL-DGVTTVGVTSGASVPEVLVRGVLERLAE 316
>gi|385219280|ref|YP_005780755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Gambia94/24]
gi|420415543|ref|ZP_14914656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4053]
gi|420429090|ref|ZP_14928123.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-17]
gi|420433744|ref|ZP_14932751.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24]
gi|420438962|ref|ZP_14937935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-29]
gi|420441894|ref|ZP_14940838.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-36]
gi|420452986|ref|ZP_14951825.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-8]
gi|420472148|ref|ZP_14970843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-18]
gi|420473944|ref|ZP_14972621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-19]
gi|420479042|ref|ZP_14977692.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-34]
gi|420482670|ref|ZP_14981306.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2]
gi|420483803|ref|ZP_14982432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3]
gi|420485945|ref|ZP_14984562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4]
gi|420487168|ref|ZP_14985775.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8]
gi|420495369|ref|ZP_14993934.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-23]
gi|420507477|ref|ZP_15005988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24b]
gi|420509501|ref|ZP_15008002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24c]
gi|420513121|ref|ZP_15011603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2b]
gi|420514388|ref|ZP_15012860.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3b]
gi|420516422|ref|ZP_15014884.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4c]
gi|420518304|ref|ZP_15016756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4d]
gi|420521559|ref|ZP_15019988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8b]
gi|420533026|ref|ZP_15031388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M1]
gi|420534473|ref|ZP_15032823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M2]
gi|420536697|ref|ZP_15035038.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M3]
gi|420538209|ref|ZP_15036538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M4]
gi|420539706|ref|ZP_15038024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M5]
gi|420540677|ref|ZP_15038987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M6]
gi|420542652|ref|ZP_15040948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M9]
gi|425432457|ref|ZP_18813020.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori GAM100Ai]
gi|317014438|gb|ADU81874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Gambia94/24]
gi|393031448|gb|EJB32519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4053]
gi|393044420|gb|EJB45412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-17]
gi|393050732|gb|EJB51687.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24]
gi|393055616|gb|EJB56532.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-29]
gi|393059508|gb|EJB60387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-36]
gi|393070594|gb|EJB71383.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-8]
gi|393089808|gb|EJB90444.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-19]
gi|393089891|gb|EJB90526.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-18]
gi|393095872|gb|EJB96474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-34]
gi|393098512|gb|EJB99101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2]
gi|393101757|gb|EJC02325.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4]
gi|393101839|gb|EJC02406.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3]
gi|393104055|gb|EJC04615.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8]
gi|393113502|gb|EJC14021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-23]
gi|393117852|gb|EJC18351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24b]
gi|393118897|gb|EJC19389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24c]
gi|393122488|gb|EJC22962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4d]
gi|393122863|gb|EJC23333.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4c]
gi|393126129|gb|EJC26580.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8b]
gi|393139291|gb|EJC39670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M1]
gi|393141698|gb|EJC42056.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M2]
gi|393142696|gb|EJC43049.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M3]
gi|393144401|gb|EJC44741.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M4]
gi|393146602|gb|EJC46928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M5]
gi|393148653|gb|EJC48974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M6]
gi|393156536|gb|EJC56800.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2b]
gi|393156937|gb|EJC57199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3b]
gi|393160222|gb|EJC60470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M9]
gi|410714996|gb|EKQ72432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori GAM100Ai]
Length = 274
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKRLCGITAGASTPDWIIENVKQKISTI 274
>gi|322420781|ref|YP_004200004.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M18]
gi|320127168|gb|ADW14728.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M18]
Length = 282
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 84/351 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC+GV+RA +A++A + + + IIH+P V +RLEEM V+++
Sbjct: 1 MEVILAKHAGFCFGVKRATHLAFDAADR--DGDTYTLGPIIHSPQVVQRLEEMGVKSV-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + G V++ + G A EE+ ++++VD TCP+V K V K
Sbjct: 57 ----EDVSEIENGGTVIIRSHGVAAEELEAAVRASLEVVDATCPFVKKAQEHVATLSKEG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++ G H E S+A G+ +V + ++ +E+
Sbjct: 113 YDVVVVGDAVHPEVQGIVSYATGRVYVVSSGRD-----------------------VERL 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ + K+G+ QTT E + ++V + R G V +NTI
Sbjct: 150 PR-----------MAKMGVVAQTTQ---SFEHLNEVVAACLARG-GETRV------YNTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
CDAT RQ+ K+ E VD ++V+ +I + ++ I++ +I P
Sbjct: 189 CDATAVRQEETKKLAGE-VDCMIVIGGFNSANTKRLAQICRELLPRTHHIETAGQIDPA- 246
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
W +G +G+T+GASTP +++V +++ I R+
Sbjct: 247 ----------------WF-EGVQRVGVTAGASTPKWLIDEVTERISAISRD 280
>gi|390939812|ref|YP_006403549.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Sulfurospirillum barnesii SES-3]
gi|390192919|gb|AFL67974.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Sulfurospirillum barnesii SES-3]
Length = 277
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 94/353 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHN-PTVNKRLEEMAVQNI- 82
+++KLAESYGFC+GV+RA++IA + +IHN +N+ E V+ +
Sbjct: 1 MQIKLAESYGFCFGVKRAIKIAENTQNA------STIGPLIHNNEEINRLRENFNVKTLH 54
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ E K D ++ G +++ L N NV++++ TCP+V+K EK +
Sbjct: 55 DISEAKGV-------DKAIIRTHGIPKKDLEKLVNSNVEVINATCPYVTKPQEICEKMSQ 107
Query: 143 GDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y +I G +H E S+A G + +V+++ E E +
Sbjct: 108 EGYEIVIFGDANHPEVKGVESYAIHGAF-VVQSIDELEQIV------------------- 147
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFIS 259
FKK K+ + +QTT E EI L+ T ++ V
Sbjct: 148 --FKKG------------KIAVVSQTTRKVSEFLEITSHLI--THYKEVRV--------- 182
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
FNTIC+AT E QDA K+ +E D+++V+ I ++ S+ ++SEK +
Sbjct: 183 FNTICNATFENQDAARKLAKE-ADVVIVIGGKNSSNTKQLHSICKEYCPDSFLVESEKDL 241
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
P +W G++ G+T+GASTPD ++ +++K+ EIK
Sbjct: 242 DP-----------------SWF-NGKMLCGVTAGASTPDWIIQKIIEKISEIK 276
>gi|71891907|ref|YP_277637.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|123641144|sp|Q493S1.1|ISPH_BLOPB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|71796013|gb|AAZ40764.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 311
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 154/335 (45%), Gaps = 54/335 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA GFC GV RA+ I E Q I++ +E++HN V +L + V I
Sbjct: 1 MKVVLASPRGFCAGVNRAINIV-EKTIQVYGTPIYVRHELVHNDYVVTQLSKKGVIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
++ + V G V++ A G + ++E + KN+ I+D TCP V+KV V + +
Sbjct: 58 ----ERLNEVPNGSVLIFSAHGVSKKIQEQSKI--KNLIIIDATCPLVTKVHKEVSRANR 111
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D I+ G H E T G+YI V N ++ Y+ + S +A+ +
Sbjct: 112 NDMEVILIGHSGHPEVEGT---MGQYISV-NSRQKIYLVE-----------SQADAWSVQ 156
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ F QTT+ +T EI ++ K G N
Sbjct: 157 VNQPNHLFF-----------VTQTTLSIDDTAEIIAILNKRFPNIMGPRK--------ND 197
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV-EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
IC AT RQ+A+ K + V++I VV I + ++ +RIG KI Y + H
Sbjct: 198 ICYATFNRQNAL-KNLAPMVEMIFVVGSITSSNSV--RLMELGRRIG---KITYLISHAN 251
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++K NWL +G IGIT+GAS PD V V++K+
Sbjct: 252 DIQK-NWL-RGVNNIGITAGASAPDILVLQVIEKL 284
>gi|420408513|ref|ZP_14907671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4216]
gi|420409838|ref|ZP_14908983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4200]
gi|420411883|ref|ZP_14911013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4228]
gi|420413632|ref|ZP_14912755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4099]
gi|420416765|ref|ZP_14915873.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4044]
gi|420418060|ref|ZP_14917153.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4076]
gi|420419549|ref|ZP_14918637.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4161]
gi|420422692|ref|ZP_14921769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4110]
gi|420423435|ref|ZP_14922507.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-4]
gi|420430232|ref|ZP_14929262.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-20]
gi|420448790|ref|ZP_14947669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-44]
gi|420451739|ref|ZP_14950590.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-6]
gi|420456783|ref|ZP_14955603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-16]
gi|420461782|ref|ZP_14960570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-3]
gi|420463525|ref|ZP_14962303.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-4]
gi|420467077|ref|ZP_14965833.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-9]
gi|420468596|ref|ZP_14967337.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-10]
gi|420470302|ref|ZP_14969012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-11]
gi|420488718|ref|ZP_14987317.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11]
gi|420499163|ref|ZP_14997719.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-26]
gi|420504090|ref|ZP_15002619.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-62]
gi|420522884|ref|ZP_15021307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11b]
gi|420531263|ref|ZP_15029637.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-28b]
gi|421721338|ref|ZP_16160614.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R055a]
gi|393025273|gb|EJB26381.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4216]
gi|393028161|gb|EJB29248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4099]
gi|393028843|gb|EJB29928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4228]
gi|393028971|gb|EJB30053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4200]
gi|393034258|gb|EJB35317.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4076]
gi|393035956|gb|EJB36998.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4044]
gi|393036626|gb|EJB37665.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4110]
gi|393038915|gb|EJB39947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4161]
gi|393041905|gb|EJB42918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-4]
gi|393048851|gb|EJB49818.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-20]
gi|393064849|gb|EJB65680.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-44]
gi|393070097|gb|EJB70888.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-6]
gi|393074815|gb|EJB75573.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-16]
gi|393080339|gb|EJB81066.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-3]
gi|393081053|gb|EJB81778.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-4]
gi|393084237|gb|EJB84931.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-9]
gi|393086427|gb|EJB87104.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-11]
gi|393087706|gb|EJB88363.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-10]
gi|393108194|gb|EJC08729.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11]
gi|393129301|gb|EJC29736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11b]
gi|393137486|gb|EJC37870.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-28b]
gi|393151365|gb|EJC51668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-26]
gi|393154922|gb|EJC55200.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-62]
gi|407225099|gb|EKE94872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R055a]
Length = 274
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|152980257|ref|YP_001354239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Janthinobacterium sp. Marseille]
gi|151280334|gb|ABR88744.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Janthinobacterium sp. Marseille]
Length = 309
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 77/347 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ ++ LA+ GFC GV+RA++I A +F I++ +EI+HN V L I
Sbjct: 2 DTEILLAQPRGFCAGVDRAIEIVERALTEF-GAPIYVRHEIVHNAYVVTDLRNKGA--IF 58
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+EE D V G+ VV A G + + +++ D TCP V+KV VEK ++
Sbjct: 59 IEE----LDDVPAGNTVVFSAHGVSKAVQAEAEKRGLRVFDATCPLVTKVHIEVEKMRRD 114
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T I M E V D +EK
Sbjct: 115 GREIIMIGHDGHPEVEGTMGQ-----IEDGMHLVETVDD-----------------VEKL 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ +PD+ + QTT+ +T + V + +F N++E I
Sbjct: 153 QVR-----NPDM----ISYVTQTTLSIDDTAD----VIAALKSRF--PNISEP--KKADI 195
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT RQ+A+ K + +VDL++VV E+AE RG+P+Y +D+ +I P
Sbjct: 196 CYATTNRQEAV-KFMAPQVDLVIVVGSPNSSNSNRLREVAEKRGVPAYMVDNASQIDP-- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+WL +G+ IG+T+GAS P+ V+ V+ ++ E
Sbjct: 253 ---------------DWL-RGKRRIGLTAGASAPEVLVQAVIDRLKE 283
>gi|92112617|ref|YP_572545.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chromohalobacter salexigens DSM 3043]
gi|122420756|sp|Q1R0B2.1|ISPH_CHRSD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|91795707|gb|ABE57846.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chromohalobacter salexigens DSM 3043]
Length = 317
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 151/361 (41%), Gaps = 83/361 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V L E + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNRFVVDSLRERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D V +V+ A G + + ++I D TCP V+KV V ++ K
Sbjct: 58 EELHEVPDDV----IVIFSAHGVSRAVQQEAERRGLRIFDATCPLVTKVHMEVLRYAKRG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
++ G H E T SF G+ +V++ + E + E+NG
Sbjct: 114 QECVLIGHAGHPEVEGTMGRYDTSFGGQIYLVEDEADVENL-------EVNGPE------ 160
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
++ QTT+ +T + + + G
Sbjct: 161 -------------------RLAFVTQTTLSMDDTSRVIDALRAKFPQIDGPRK------- 194
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ + E DL+LVV E+AE G P+Y ID+ ++I
Sbjct: 195 -DDICYATQNRQDAVRGLASES-DLVLVVGSPNSSNSNRLRELAERTGTPAYLIDTAEQI 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
P WL IGIT+GAS P+ V+ V++++ + E +L
Sbjct: 253 RP-----------------EWLTDVS-AIGITAGASAPEVLVQAVIERLQSLGAEAPDEL 294
Query: 368 A 368
A
Sbjct: 295 A 295
>gi|197303561|ref|ZP_03168600.1| hypothetical protein RUMLAC_02283 [Ruminococcus lactaris ATCC
29176]
gi|197297559|gb|EDY32120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ruminococcus
lactaris ATCC 29176]
Length = 284
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 54/333 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ AES GFC+GV+RAV Y+ + +EKI+ IIHN V K +E+ V+ I
Sbjct: 1 MKIIKAESAGFCFGVKRAVDTVYKCTETGTDEKIYTYGPIIHNEEVVKDMEKRGVRVIRS 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K V++ + G L K + IVD TCP+V K+ VEKH +
Sbjct: 61 EEDLAAL----KEGTVIIRSHGVEKRVYEELEKKGIHIVDATCPFVKKIHKIVEKHSEQG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
II G H E +A + +++N++EAE
Sbjct: 117 DRIIIIGNPDHPEVQGIRGWAKSPVSVIRNVEEAE------------------------- 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
F D K+ I QTT + +E+ +++EK + + V NTI
Sbjct: 152 ------SFSCPADQ-KICIVAQTTFNYNKFKELVEIIEK---KSYDVS-------VLNTI 194
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT+ERQ + + E VD ++V+ + K N Y G+L
Sbjct: 195 CNATKERQTEA-RSIAETVDAMIVIGDKHSSNTQKLFEICRK---ACNNTYYIQTLGDL- 249
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
N L + T+GIT+GASTP+ +E+V V
Sbjct: 250 -DLNQLGSVE-TVGITAGASTPNNIIEEVQNNV 280
>gi|420400035|ref|ZP_14899238.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY3281]
gi|393018656|gb|EJB19803.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY3281]
Length = 274
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A++YGFC+GV+RA+QIA + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKNYGFCFGVKRAIQIAERNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|386752983|ref|YP_006226202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi169]
gi|384559241|gb|AFH99708.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi169]
Length = 274
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLNIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|217034329|ref|ZP_03439745.1| hypothetical protein HP9810_491g22 [Helicobacter pylori 98-10]
gi|384887957|ref|YP_005762468.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 52]
gi|384896327|ref|YP_005770316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 35A]
gi|385215618|ref|YP_005775574.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F32]
gi|386754514|ref|YP_006227732.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi112]
gi|387908311|ref|YP_006338645.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori XZ274]
gi|420397283|ref|ZP_14896500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1313]
gi|420398659|ref|ZP_14897871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1962]
gi|420405398|ref|ZP_14904577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6271]
gi|216943214|gb|EEC22681.1| hypothetical protein HP9810_491g22 [Helicobacter pylori 98-10]
gi|261839787|gb|ACX99552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 52]
gi|315586943|gb|ADU41324.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 35A]
gi|317180146|dbj|BAJ57932.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F32]
gi|384560772|gb|AFI01239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi112]
gi|387573246|gb|AFJ81954.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori XZ274]
gi|393011702|gb|EJB12887.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1313]
gi|393013648|gb|EJB14823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1962]
gi|393022840|gb|EJB23956.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6271]
Length = 274
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|420450012|ref|ZP_14948877.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-45]
gi|420460529|ref|ZP_14959327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-27]
gi|444374992|ref|ZP_21174293.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori A45]
gi|393068208|gb|EJB69011.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-45]
gi|393076486|gb|EJB77238.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-27]
gi|443620477|gb|ELT80922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori A45]
Length = 274
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W ++ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WFRDKKLC-GITAGASTPDWIIENVKQKISTI 274
>gi|404371213|ref|ZP_10976521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_2_43FAA]
gi|226912661|gb|EEH97862.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_2_43FAA]
Length = 635
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 57/329 (17%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LAES GFC+GV+RAV+ A + +KQ+ ++KI+ +IHN V + LE+ + +I
Sbjct: 3 KVVLAESAGFCFGVQRAVEEALKVKKQY-DKKIYTLGPLIHNNDVVRYLEKNDIYSIDFS 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D + KGDV+V+ + G + + TL K + +V+ TCP+V+ + V K+ Y
Sbjct: 62 E----IDKLEKGDVIVIRSHGVTKKVVNTLEEKGLVVVNATCPYVTNIHKKVNKYSDLGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA-FLEKFK 204
+I G H E + + I+ TK+ F E+
Sbjct: 118 NIVILGDDKHPEVIGINGWCNDSAII-----------------------TKDGTFEEELP 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K K+ + +QTT E EE K KT+ + + ++ ++FNTIC
Sbjct: 155 K-------------KICVVSQTT----EKEETWK---KTLN---NLSSNSKELLAFNTIC 191
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
AT+ RQ + ++ + +I++ Y I + K + E +E
Sbjct: 192 SATEVRQKSANELSQNVDTMIVIGGRNSSNTTKLYQIAKANCPNTIHVENAKELTKEFIE 251
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVL 353
+ KG++ +G+T+GASTPD +++V+
Sbjct: 252 EN----KGKV-VGVTAGASTPDWIIKEVI 275
>gi|385230336|ref|YP_005790252.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno135]
gi|344336774|gb|AEN18735.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno135]
Length = 274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKRVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|420458843|ref|ZP_14957652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-26]
gi|420465813|ref|ZP_14964577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-6]
gi|420493869|ref|ZP_14992439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-16]
gi|420502508|ref|ZP_15001048.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-41]
gi|421714706|ref|ZP_16154025.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R036d]
gi|421719381|ref|ZP_16158667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R046Wa]
gi|393074186|gb|EJB74947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-26]
gi|393080143|gb|EJB80871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-6]
gi|393111268|gb|EJC11791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-16]
gi|393152424|gb|EJC52721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-41]
gi|407217279|gb|EKE87114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R036d]
gi|407222552|gb|EKE92351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R046Wa]
Length = 274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKRLCGITAGASTPDWIIENVKQKISTI 274
>gi|322379466|ref|ZP_08053836.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
suis HS1]
gi|321148175|gb|EFX42705.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
suis HS1]
Length = 274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 85/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+A++YGFC+GV+RA++IA + + +IHNP KRLE+ N+ V
Sbjct: 1 MQVKMAKNYGFCFGVKRAIEIAQKNKNSV------TLGSLIHNPKEIKRLEQNF--NVKV 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V++ G ++ L K I+D TCP+V K VEK
Sbjct: 53 QEN---VSAIESNSHVIIRTHGIPKNDLTLLKEKGAHIIDATCPYVIKPQQIVEKMSAKG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S+A +V N S ++ + +K
Sbjct: 110 YQIVIFGDANHPEVKGVISYAHTPPLVIN--------------------SLEQLYTQKLS 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K +V + +QTT + EI + ++R V FNTIC
Sbjct: 150 K-------------RVALVSQTTKQTPQLLEIASFL---IVRCAEVR-------IFNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT E Q+A+ ++ +E VD+++VV IA++ SY ++ K + P
Sbjct: 187 NATFENQEAVRELSQE-VDIMVVVGGKTSSNTKQLFNIAKEFCTDSYLVEDFKDLDP--- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVF 357
W G+ GI++GASTPD +E V +K+
Sbjct: 243 --------------TWF-MGKKLCGISAGASTPDWIIEGVREKIL 272
>gi|296133096|ref|YP_003640343.1| hydroxymethylbutenyl pyrophosphate reductase [Thermincola potens
JR]
gi|296031674|gb|ADG82442.1| hydroxymethylbutenyl pyrophosphate reductase [Thermincola potens
JR]
Length = 674
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 85/353 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC+GV+RA+ I + K+ I+ +IHNP V ++LE+ + I V E
Sbjct: 5 LAPKAGFCFGVKRALDITLKTAKEHAG-PIYTLGPLIHNPQVVQQLEQ---RGIKVAE-- 58
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+++G +V+ + G A + + +K +Q++D TCP+V K +K + +
Sbjct: 59 -DLSDIHEGTLVIR-SHGVAPDVLEEAASKGLQVIDATCPFVKKAQELAKKMQAEGRLVV 116
Query: 149 IHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G H E + G + ++V+N +EAE + GS
Sbjct: 117 VIGDKKHPEVAGIIGWTGNRGVVVENPEEAEKI--------ETGSP-------------- 154
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
+G+ QTT + EE ++ ++N ++ NTIC AT
Sbjct: 155 ------------IGVVCQTTQPEQNFEETVRI----------LQNKGTDIVAHNTICHAT 192
Query: 268 QERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAY 315
+ERQD+ V E VD+++V+ + E+ G P+Y I++ +
Sbjct: 193 RERQDSAIN-VAESVDVMIVIGGRNSANTKKLARLCEETGTPTYHIETAAEL-------- 243
Query: 316 KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI-KREEALQL 367
+++W KG +G+T+GASTP +E+V +K+ E+ R+E + +
Sbjct: 244 ---------QQDWF-KGAKKVGLTAGASTPGWIIEEVKRKMEEMTNRDEGMNM 286
>gi|187932428|ref|YP_001885998.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B str. Eklund 17B]
gi|187720581|gb|ACD21802.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B str. Eklund 17B]
Length = 635
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 157/353 (44%), Gaps = 77/353 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +KQ E+KI+ +IHN V K LE+ + +I +E
Sbjct: 4 VILAQNAGFCFGVKRAVDEAIKIQKQ-AEKKIYTLGPLIHNNDVVKFLEKNNIYSIELE- 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+NK DV+V+ + G + E + L +++ D TCP+V+ + V K+ K Y
Sbjct: 62 ---NITTLNKDDVIVIRSHGVSEEVLNLLQKNELKVKDATCPFVTNIQKKVNKYYKLGYN 118
Query: 147 SIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G +H E + + + II KN GE
Sbjct: 119 IVILGDSNHPEVIGINGWCNNEAIISKN-------------GE----------------- 148
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN---EHFISFNT 262
FD DV KV + +QTT EK + ++NV+ + ++FNT
Sbjct: 149 -----FDDDVP-AKVCVVSQTT-------------EKVANWETLIKNVSSKAKEVLAFNT 189
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQ + K+ +E ++++ Y I + +H
Sbjct: 190 ICAATDVRQRSTSKLSKEVEAMVVIGGKNSSNTTKLYQIAKQN--------CDNTIH--- 238
Query: 323 VEKENWLPKGQIT-----IGITSGASTPD---KAVEDVLKKVFEIKREEALQL 367
+E N LPK I +GIT+GASTPD + V ++ IK ++ L L
Sbjct: 239 IENVNELPKDFINNNINKVGITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|302875012|ref|YP_003843645.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
gi|307690370|ref|ZP_07632816.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
gi|302577869|gb|ADL51881.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
Length = 286
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 59/330 (17%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A++ GFC+GV+RAV A Q EK++ IIHN V +LEE V +I +
Sbjct: 7 IAKNSGFCFGVKRAVDTASNKNIQ---EKMYTLGPIIHNNDVVSKLEESNVFSIELS--- 60
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ D +N+ D +++ + G + M LN+KN+ IVD TCP+V+ + V + Y+ +
Sbjct: 61 -KIDSLNESDTIIIRSHGVSKAVMDLLNSKNLNIVDATCPYVTNIHKKVHDYHNQGYSIL 119
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
I G +H E V +NG S EA + K +
Sbjct: 120 IVGDKNHPEVVG----------------------------INGWCSN-EAIITKDGSDLE 150
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
P K+ + +QTT + +++ ++ KT ++ ++ NTIC AT+
Sbjct: 151 TAEIPK----KLCVVSQTTEKQENWQKVLSILIKT----------SKELVALNTICSATE 196
Query: 269 ERQ-DAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
RQ +AM ++ +KVDL++V+ + I N L+ E +
Sbjct: 197 VRQKNAM--VLSKKVDLMIVIGGKHSSNTTKLF-----EICKENCNNTLLIENETELSID 249
Query: 328 WLPKGQI-TIGITSGASTPDKAVEDVLKKV 356
+L I IGIT+GASTPD + V+ K+
Sbjct: 250 FLKNTDIRIIGITAGASTPDWIINQVVDKI 279
>gi|374619242|ref|ZP_09691776.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [gamma
proteobacterium HIMB55]
gi|374302469|gb|EHQ56653.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [gamma
proteobacterium HIMB55]
Length = 317
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 150/342 (43%), Gaps = 77/342 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GV+RA+ I A + F + I++ +E++HN TV L + + VEE
Sbjct: 3 VMLANPRGFCAGVDRAIDIVNRALEVF-GQPIYVRHEVVHNKTVVDDLRDRGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D V +V+ A G + N+ +Q+ D TCP V+KV V +
Sbjct: 60 ----LDEVPDDAIVIFSAHGVSKAVQDEAANRGLQVFDATCPLVTKVHVEVTAFSRSGKE 115
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
I+ G H E T G+Y + GGE+ +L + ++
Sbjct: 116 CILIGHEGHPEVEGT---MGQY-------------NRANGGEM---------YLVEDEEQ 150
Query: 207 VSKGF--DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
SK DPD + QTT+ ++ K++E R ++ + + IC
Sbjct: 151 ASKLVVRDPD----NLSYVTQTTL---SVDDTAKVIEALRARFPNIQGPRK-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ + + EK +++LVV E+AE G +Y IDS + I P
Sbjct: 199 YATQNRQDAV-RTLAEKANVVLVVGSPNSSNSNRLAELAERCGSSAYLIDSAEMIDP--- 254
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+W+ +G T+G+T+GAS P+ VE V+
Sbjct: 255 --------------SWVSEGD-TVGVTAGASAPEHLVEGVVS 281
>gi|334341469|ref|YP_004546449.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
ruminis DSM 2154]
gi|334092823|gb|AEG61163.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
ruminis DSM 2154]
Length = 671
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 157/360 (43%), Gaps = 88/360 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V+LA GFC+GV+RA+++A ++ E I+ +IHNP V K L ++ I V
Sbjct: 1 MEVRLASKAGFCYGVKRAIELALTTAEEN-EGPIYTLGPLIHNPQVVKDLANRGIKEITV 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
N+G V++ + G + + K+V+I+D TCP+V++ + +
Sbjct: 60 LPQ-------NEGGTVIIRSHGVGPDILQEAQEKDVRIMDATCPFVARAQRYAREMAEQG 112
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I G H E + GK I+++ +E V D+
Sbjct: 113 LPVYILGDPGHPEVQGILGWTKGKGIVIEGAEEINPVEDH-------------------- 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+VG+ QTT + + + ++K + + NTI
Sbjct: 153 ---------------RVGLVAQTTQPLANYQAVVEALQKQGL----------QVDARNTI 187
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT ERQ A ++ + VD+++VV I ++ G P+Y ++S + +
Sbjct: 188 CHATGERQQAALELA-KTVDVMIVVGGKESANTKKLARICQETGTPTYHVESAQEL---- 242
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR---EEALQLA 368
+E+W + T G+T+GASTPD +E+V +++ E+ + EEA+Q A
Sbjct: 243 -------------QEDWFREAG-TCGLTAGASTPDAIIEEVKRRMNEMDQMNGEEAMQDA 288
>gi|15612046|ref|NP_223698.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori J99]
gi|15645028|ref|NP_207198.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|108563417|ref|YP_627733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HPAG1]
gi|210135213|ref|YP_002301652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P12]
gi|254779608|ref|YP_003057714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B38]
gi|308184792|ref|YP_003928925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SJM180]
gi|383749329|ref|YP_005424432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori ELS37]
gi|384891407|ref|YP_005765540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 908]
gi|384897722|ref|YP_005773150.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Lithuania75]
gi|385224086|ref|YP_005784012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2017]
gi|385231942|ref|YP_005791861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2018]
gi|386746471|ref|YP_006219688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HUP-B14]
gi|386756049|ref|YP_006229266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan18]
gi|410023636|ref|YP_006892889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif1]
gi|410501403|ref|YP_006935930.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif2]
gi|410681922|ref|YP_006934324.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|419416299|ref|ZP_13956869.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P79]
gi|419418134|ref|ZP_13958483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|420425131|ref|ZP_14924194.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-5]
gi|420431453|ref|ZP_14930472.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-16]
gi|420440197|ref|ZP_14939155.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-30]
gi|420446785|ref|ZP_14945681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-43]
gi|420455271|ref|ZP_14954101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-14]
gi|420477075|ref|ZP_14975736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-23]
gi|420481105|ref|ZP_14979745.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1]
gi|420490573|ref|ZP_14989158.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13]
gi|420500601|ref|ZP_14999146.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-30]
gi|420510978|ref|ZP_15009466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1b]
gi|420519539|ref|ZP_15017982.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-5b]
gi|420524432|ref|ZP_15022841.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13b]
gi|421709939|ref|ZP_16149297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R018c]
gi|421711800|ref|ZP_16151142.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R030b]
gi|421713697|ref|ZP_16153027.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R32b]
gi|421723252|ref|ZP_16162508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R056a]
gi|54037480|sp|P65186.1|ISPH_HELPJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|54041395|sp|P65185.1|ISPH_HELPY RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|122386334|sp|Q1CSL3.1|ISPH_HELPH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226741035|sp|B6JMP4.1|ISPH_HELP2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|2313506|gb|AAD07469.1| penicillin tolerance protein (lytB) [Helicobacter pylori 26695]
gi|4155562|gb|AAD06556.1| LYSIS TOLERANCE PROTEIN [Helicobacter pylori J99]
gi|107837190|gb|ABF85059.1| isoprenyl pyrophosphate and dimethylallyl diphosphate synthetase
[Helicobacter pylori HPAG1]
gi|210133181|gb|ACJ08172.1| 4-hydroxy-3-methyl-but-2-enyl diphosphate reductase [Helicobacter
pylori P12]
gi|254001520|emb|CAX29538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B38]
gi|307637716|gb|ADN80166.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 908]
gi|308060712|gb|ADO02608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SJM180]
gi|317012827|gb|ADU83435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Lithuania75]
gi|325996319|gb|ADZ51724.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2018]
gi|325997908|gb|ADZ50116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2017]
gi|380874075|gb|AFF19856.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori ELS37]
gi|384374683|gb|EIE30062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|384375504|gb|EIE30786.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P79]
gi|384552720|gb|AFI07668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HUP-B14]
gi|384562307|gb|AFI02773.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan18]
gi|393042377|gb|EJB43387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-5]
gi|393049046|gb|EJB50012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-16]
gi|393057048|gb|EJB57954.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-30]
gi|393064771|gb|EJB65603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-43]
gi|393073621|gb|EJB74395.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-14]
gi|393094238|gb|EJB94849.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-23]
gi|393094688|gb|EJB95294.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1]
gi|393108137|gb|EJC08673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13]
gi|393120883|gb|EJC21371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1b]
gi|393126982|gb|EJC27428.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-5b]
gi|393132529|gb|EJC32949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13b]
gi|393150983|gb|EJC51287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-30]
gi|407210840|gb|EKE80714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R018c]
gi|407211750|gb|EKE81616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R030b]
gi|407214829|gb|EKE84671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R32b]
gi|407225222|gb|EKE94994.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R056a]
gi|409893563|gb|AFV41621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|409895293|gb|AFV43215.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif1]
gi|409896954|gb|AFV44808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif2]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|384894582|ref|YP_005768631.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Sat464]
gi|308063836|gb|ADO05723.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Sat464]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KNKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|384889664|ref|YP_005763966.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori v225d]
gi|297380230|gb|ADI35117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori v225d]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 155/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A++YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKNYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|108801069|ref|YP_641266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MCS]
gi|119870211|ref|YP_940163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. KMS]
gi|123069758|sp|Q1B4H4.1|ISPH_MYCSS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166217174|sp|A1UKL5.1|ISPH_MYCSK RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|108771488|gb|ABG10210.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MCS]
gi|119696300|gb|ABL93373.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. KMS]
Length = 333
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV--- 79
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY
Sbjct: 80 ---EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ V + +A K
Sbjct: 137 DILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA-------------------------VDK 171
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ DPD KV +QTT+ ET E V + E F +
Sbjct: 172 VTVR--DPD----KVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 212
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E LV+ + S + E +G G+ A+ + +
Sbjct: 213 DDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALGAGSDAAHLVDYA 268
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 269 EDIDP-TWL-NGVTTVGVTSGASVPEVLVRGVLDRLAE 304
>gi|126436907|ref|YP_001072598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. JLS]
gi|166217173|sp|A3Q4N0.1|ISPH_MYCSJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|126236707|gb|ABO00108.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. JLS]
Length = 333
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV--- 79
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY
Sbjct: 80 ---EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ V + +A K
Sbjct: 137 DILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA-------------------------VDK 171
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ DPD KV +QTT+ ET E V + E F +
Sbjct: 172 VTVR--DPD----KVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 212
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E LV+ + S + E +G G+ A+ + +
Sbjct: 213 DDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALGAGSDAAHLVDYA 268
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 269 EDIDP-TWL-DGVTTVGVTSGASVPEVLVRGVLDRLAE 304
>gi|163781892|ref|ZP_02176892.1| LytB protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883112|gb|EDP76616.1| LytB protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 65/344 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPE-EKIWITNEIIHNPTVNKRLEEMAVQNIP 83
V++ +A + GFC+GV+RAV++A E+ + +++ IIHNP RL+ M V+ +
Sbjct: 2 VEIIVAPNAGFCFGVKRAVKLAEESSHITGQGARVFTLGPIIHNPQEVGRLKSMGVKPLE 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
EE ++GD +++ + G + L +K +Q++D TCP+V V +V K +
Sbjct: 62 DEEP-------HEGDAIIIRSHGIPPDRERELRSKGLQVIDATCPYVKAVHDAVCKLAEE 114
Query: 144 DYTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
Y ++ G+ +H E + T + G+ ++V++M + E
Sbjct: 115 GYFIVLVGEKNHPEVIGTLGYLKECKGEGVVVESMDDLE--------------------- 153
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTML-KGETEEIGKLVEKTMMRKFGVENVNEHFI 258
P + KVG+ +QTT K E +G+L K
Sbjct: 154 -------------PVLKHEKVGVVSQTTQSEKFFKEVVGELALWAKELKV---------- 190
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM 318
NTIC+AT RQ+ +Y++ + VD+++++ ++ G + + + N+ +Y +
Sbjct: 191 -INTICNATSVRQEDVYQLAPQ-VDVMIIIG-GKNSGNTRRLYNIARSL---NENSYHIE 244
Query: 319 HGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
E ++ E W +G +GIT+GASTP +E V K+ EI RE
Sbjct: 245 TPEELKSE-WF-EGVKRVGITAGASTPSWIIESVRSKIEEICRE 286
>gi|420444069|ref|ZP_14942993.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-41]
gi|393058948|gb|EJB59831.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-41]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQYCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|433654958|ref|YP_007298666.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293147|gb|AGB18969.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 286
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 59/340 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC+GV+RAV++AY+ + + + E+IHNP V K LE ++ I
Sbjct: 1 MKILIADNAGFCFGVKRAVKMAYDQINRDDSRQTYTYGELIHNPQVVKDLEGKGIKTIG- 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D + + D +++ G + L K ++++D TCP+V +V V + K
Sbjct: 60 -----GIDNLKENDRIIIRTHGIPEKTYKDLKEKKIELIDMTCPFVKRVQKIVNGYYKKG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
YT +I G +H E + +NG +E
Sbjct: 115 YTIVIIGDKNHPEVIG----------------------------VNGWCDNSAYVIESVN 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P +D K + QTT+ + E+ L++ VNE +SFNTIC
Sbjct: 147 DV---QLLPYID--KACVVAQTTITQKMWEDSLNLLKLK---------VNE-LVSFNTIC 191
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN-KIAYKLMHGELV 323
DAT +RQ + + + +K D+++V+ G S KRI N K ++ + + +
Sbjct: 192 DATNKRQSSAEE-ISKKADVMIVIG-----GKNSSNTQKLKRICEKNCKRTIQVENADEI 245
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ + +GIT+GASTPD +++V+ K+ I R+E
Sbjct: 246 DLS--IFNDNDIVGITAGASTPDYLIQEVINKI-AINRKE 282
>gi|332297477|ref|YP_004439399.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
brennaborense DSM 12168]
gi|332180580|gb|AEE16268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
brennaborense DSM 12168]
Length = 310
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 51/333 (15%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK 89
A+ G+C GV RAV+ A + +++ +IHN T L VQ + E+ +
Sbjct: 10 ADILGYCMGVRRAVEAVENALADYDGRRVYTLGPLIHNKTALDSLAARGVQVLDAEDMHR 69
Query: 90 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSII 149
V GDVVV+ A G L + ++D TCP V YT +I
Sbjct: 70 ----VQSGDVVVIRAHGVPPAVRAQLAARGCTVIDATCPRVLLSQRRAADFAAKGYTVVI 125
Query: 150 HGKYSHEETVATASFAG-------KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
G +H E A +A + ++V+N ++A+ + A L +
Sbjct: 126 AGDKNHGEVTGIAGYAADPATGESRCLLVENREDAQRLV----------------AALTE 169
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+A V VK + +QTT+ + E + I ++ + G+ ++ FNT
Sbjct: 170 TARAAGAPQVKVVQPVKAVLISQTTISRSEYDAIAGVL------RAGITDLR----VFNT 219
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT ERQ+A+ + + VD +LVV ++ S + S + + L
Sbjct: 220 ICPATMERQEALRDLCVQ-VDGVLVVG-GKNSANTSRLLMSAREL---------CRRAAL 268
Query: 323 VEKENWLP---KGQITIGITSGASTPDKAVEDV 352
+E + +P + IG+T+GASTPD ++ V
Sbjct: 269 IETADEIPPDFRSLDRIGLTAGASTPDAVIDAV 301
>gi|385228734|ref|YP_005788667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno120]
gi|344335172|gb|AEN15616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno120]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 153/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G + + L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQNLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|384893032|ref|YP_005767125.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Cuz20]
gi|385220856|ref|YP_005782328.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori India7]
gi|425791259|ref|YP_007019176.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik86]
gi|308062329|gb|ADO04217.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Cuz20]
gi|317009663|gb|ADU80243.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori India7]
gi|425629574|gb|AFX90114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik86]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|420435174|ref|ZP_14934174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-27]
gi|420445406|ref|ZP_14944318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-42]
gi|420492210|ref|ZP_14990785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15]
gi|420498090|ref|ZP_14996649.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25]
gi|420525975|ref|ZP_15024377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15b]
gi|420527904|ref|ZP_15026297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25c]
gi|420529672|ref|ZP_15028058.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25d]
gi|393052942|gb|EJB53888.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-27]
gi|393062241|gb|EJB63098.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-42]
gi|393108011|gb|EJC08550.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15]
gi|393111329|gb|EJC11851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25]
gi|393132720|gb|EJC33139.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15b]
gi|393134450|gb|EJC34861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25c]
gi|393136878|gb|EJC37267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25d]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W ++ GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WFRDKKLC-GITAGASTPDWIIENVKQKISTI 274
>gi|385222470|ref|YP_005771603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SouthAfrica7]
gi|317011249|gb|ADU84996.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SouthAfrica7]
Length = 274
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKDKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT Q A + +E VD+++VV +++ K +Y LVE
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHC----KDSY------LVE 235
Query: 325 KENWLP----KGQITIGITSGASTPDKAVEDVLKKVFEI 359
EN L K + GIT+GASTPD +E+V +K+ I
Sbjct: 236 DENELEMAWFKDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|251778389|ref|ZP_04821309.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243082704|gb|EES48594.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 635
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 71/352 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA++ GFC+GV+RAV A + +KQ +KI+ +IHN V K LE+ + +I +
Sbjct: 2 IEVILAQNAGFCFGVKRAVDEAIKIQKQ-EGKKIYTLGPLIHNNDVVKFLEKNNIYSIEL 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D +NK DV+V+ + G + E + L +++ D TCP+V+K+ V K+ K
Sbjct: 61 E----NIDTLNKDDVIVIRSHGVSEEVLNLLQKNQLKVKDATCPFVTKIQKKVNKYYKLG 116
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G +H E + + + II KN GE
Sbjct: 117 YNIVILGDANHPEVIGINGWCNNEAIISKN-------------GE--------------- 148
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
F+ DV K+ + +QTT E T+++ + ++ ++FNTI
Sbjct: 149 -------FNEDV-YAKICVVSQTTEKAANWE--------TLIKNVSAK--SKEVLAFNTI 190
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C AT RQ + K+ +E ++++ Y I + +H +
Sbjct: 191 CAATDVRQRSTNKLSKEVEAMVVIGGKNSSNTTKLYQIAKQN--------CDDTIH---I 239
Query: 324 EKENWLPKGQIT-----IGITSGASTPD---KAVEDVLKKVFEIKREEALQL 367
E N LPK I +GIT+GASTPD + V ++ IK ++ L L
Sbjct: 240 ENVNELPKEFINNNINKVGITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|188527835|ref|YP_001910522.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi470]
gi|238691939|sp|B2UUG0.1|ISPH_HELPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|188144075|gb|ACD48492.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi470]
Length = 274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 150/347 (43%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QTT + +I + VE E I FNTIC
Sbjct: 151 --------------KVALVSQTTKQTPQLLQIA---------SYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KNKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|268679252|ref|YP_003303683.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurospirillum
deleyianum DSM 6946]
gi|268617283|gb|ACZ11648.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurospirillum
deleyianum DSM 6946]
Length = 277
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 153/352 (43%), Gaps = 92/352 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA SYGFC+GV+RA++IA + +IHN RL E N V
Sbjct: 1 MKIKLATSYGFCFGVKRAIKIAENTQNA------STIGPLIHNNEEINRLRE----NFNV 50
Query: 85 EEGKKQFDVVNKGDV--VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
K D+ V ++ G ++ TL NV++++ TCP+V+K EK K
Sbjct: 51 ---KTLHDISEASGVEKAIIRTHGIPKNDLETLVQSNVEVINATCPYVTKPQEICEKMSK 107
Query: 143 GDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y +I G +H E S+A G ++I S E
Sbjct: 108 EGYEIVIFGDANHPEVKGVESYAIHGAHVI----------------------QSVDELAD 145
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
KFK++ K+ + +QTT E EI + T ++ V F
Sbjct: 146 VKFKRS------------KIAVVSQTTRKVSEFLEITSYL-ITHYKEVRV---------F 183
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTIC+AT E QDA ++ +E D+++V+ I ++ S+ ++SEK +
Sbjct: 184 NTICNATFENQDAARELAKE-ADVVVVIGGKNSSNTKQLHSICKEYCPDSFLVESEKDLD 242
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
P +W +G++ G+T+GASTPD +E ++ K+ EIK
Sbjct: 243 P-----------------SWF-EGKMLCGVTAGASTPDWIIEKIIGKISEIK 276
>gi|269925755|ref|YP_003322378.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobaculum
terrenum ATCC BAA-798]
gi|269789415|gb|ACZ41556.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobaculum
terrenum ATCC BAA-798]
Length = 293
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 72/352 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VKLA GFC+GV++ +++ E + ++HNP V + E+ + + V
Sbjct: 1 MQVKLARELGFCFGVKKTLKLFDEMGSD--SRGVKTLGTLVHNPQV---VSELKARGVGV 55
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V+ G + + A GA + K ++++DTTCP V+KV E K
Sbjct: 56 ---AYSVDEVDSGTLTIT-AHGAGPDAYAEAQRKGLRLLDTTCPLVTKVQKIAESLHKDG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVK-NMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +++G +H+E + +V + KE L L +S+K+ +K
Sbjct: 112 YQVVVYGDPNHQEVRGIVGWTENTALVSTDAKE--------LVPRLKALTSSKKRVPKKL 163
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
VS+ P + K IA ++L ++ NE F NTI
Sbjct: 164 -AVVSQTTQP-AERFKSFIAELVSLLP--------------------DDFNE-FHVHNTI 200
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C T +RQ A+ ++ E VD+++VV E+A + G+P+Y I+ + I P
Sbjct: 201 CQPTLDRQSAVVELANE-VDVMVVVGGRDSANTKHLAELASEEGVPTYHIEWPEEIDP-- 257
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
NW KG +G+T+GASTPD +E V+K + I+ EE
Sbjct: 258 ---------------NWF-KGAKVVGVTAGASTPDAVIEKVVKTIEAIEPEE 293
>gi|291550295|emb|CBL26557.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Ruminococcus torques L2-14]
Length = 284
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 153/334 (45%), Gaps = 56/334 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV A+S GFC+GV+RAV Y+ ++ I+ IIHN V K LE+ V +
Sbjct: 1 MKVIKAKSAGFCFGVKRAVDTVYKQVEENQNLPIYTYGPIIHNEEVVKDLEQKGVIVLRS 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D + +G V++ + G A + L +K +QIVD TCP+V K+ V+KH +
Sbjct: 61 EE---ELDTLERG-TVIIRSHGVAKDVYDRLESKKIQIVDATCPFVKKIHNIVQKHSEMG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAE-YVCDYILGGELNGSSSTKEAFLEK 202
II G H E +AG ++ + + +EAE Y C E+
Sbjct: 117 ENIIIIGNPEHPEVQGIKGWAGDHVEVFQTKEEAENYSC-------------------EQ 157
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K K+ I QTT + +E+ +++EK + + V NT
Sbjct: 158 GK--------------KICIVAQTTFNYNKFKELVEILEK---KSYDVS-------VLNT 193
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC+AT+ERQ + + E VD ++V+ + K N Y G+L
Sbjct: 194 ICNATKERQTEA-QSIAETVDAMIVIGDKHSSNTQKLFEICRK---ACNNTYYIQTLGDL 249
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
N L + T+GIT+GASTP+ +E+V V
Sbjct: 250 --DLNQLGSVE-TVGITAGASTPNNIIEEVQNNV 280
>gi|383812824|ref|ZP_09968251.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Serratia sp.
M24T3]
gi|383298234|gb|EIC86541.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Serratia sp.
M24T3]
Length = 316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 151/344 (43%), Gaps = 74/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA GFC GV+RA+ I A + + I++ +E++HN V L + I
Sbjct: 1 MQVLLANPRGFCAGVDRAITIVERALELY-GAPIYVRHEVVHNRYVVDSLRQRGAVFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+Q V G +++ A G + ++++ + D TCP V+KV V + +
Sbjct: 58 ----EQISEVPDGSILIFSAHGVSQAVRTEAKSRDLTVFDATCPLVTKVHMEVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y N K Y+ E+ + FK
Sbjct: 114 TEAILIGHAGHPEVEGT---MGQY---NNPKGGMYLV---------------ESPADVFK 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V DP+ + QTT+ +T E+ + + + G + IC
Sbjct: 153 LDVK---DPE----NLCFMTQTTLSVDDTSEVIDALRERFPKIVGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+A+ + +E D++LVV E+A+ G PSY IDS + I
Sbjct: 198 YATTNRQEAVRNLSDE-ADVVLVVGSKNSSNSNRLAELAQRVGKPSYLIDSAEDI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
KE W+ KG I++G+T+GAS PD V++V++++
Sbjct: 252 ------------KEEWV-KGAISVGVTAGASAPDILVQEVIERL 282
>gi|386332674|ref|YP_006028843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum Po82]
gi|334195122|gb|AEG68307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum Po82]
Length = 325
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A ++F I++ +EI+HN V L
Sbjct: 14 TEADAEVLLAQPRGFCAGVDRAIEIVERALQRF-GAPIYVRHEIVHNAYVVSDLRSKGAV 72
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + + +++ D TCP V+KV V K
Sbjct: 73 FV------QELDDVPVGGTVIFSAHGVSRAVRLAAEARGLRVFDATCPLVTKVHVEVSKM 126
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + ++ G H E T M +A+ D +L E +
Sbjct: 127 RAQGFEIVMIGHKGHPEVEGT------------MGQAD---DGMLLVE----------SV 161
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E + V K D ++ QTT+ ET+EI V R V H
Sbjct: 162 EDVARLVVK------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 207
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 208 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 266
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 267 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 296
>gi|188588993|ref|YP_001921151.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E3 str. Alaska E43]
gi|188499274|gb|ACD52410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E3 str. Alaska E43]
Length = 635
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 155/350 (44%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +KQ E+KI+ +IHN V K LE+ + +I +E
Sbjct: 4 VILAQNAGFCFGVKRAVDEAIKIQKQ-EEKKIYTLGPLIHNNDVVKFLEKNNIYSIELE- 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+NK DV+V+ + G + E + L ++I D TCP+V+K+ V K+ Y
Sbjct: 62 ---NIATLNKDDVIVIRSHGVSEEVLNLLQQNQLKIKDATCPFVTKIQKKVNKYYNLGYN 118
Query: 147 SIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G +H E + + + II KN GEL+G
Sbjct: 119 IVILGDANHPEVIGINGWCNNEAIISKN-------------GELHGDVPA---------- 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV + +QTT E T+++ + ++ ++FNTIC
Sbjct: 156 -------------KVCVVSQTTEKAANWE--------TLIKNVSAK--SKEVLAFNTICA 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT RQ + K+ +E ++++ Y I + +H +E
Sbjct: 193 ATDVRQRSTNKLSKEVEAMVVIGGKNSSNTTKLYQIAKQN--------CDDTIH---IEN 241
Query: 326 ENWLPKGQIT-----IGITSGASTPD---KAVEDVLKKVFEIKREEALQL 367
N LPK I +GIT+GASTPD + V ++ IK ++ L L
Sbjct: 242 VNELPKEFINNNINKVGITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|344939823|ref|ZP_08779111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacter
tundripaludum SV96]
gi|344261015|gb|EGW21286.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacter
tundripaludum SV96]
Length = 315
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 156/344 (45%), Gaps = 72/344 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA++I +A + F I++ +E++HN TV L+E I +
Sbjct: 1 MQIVLANPRGFCAGVDRAIEIVDQAIQAFGA-PIYVRHEVVHNRTVVDGLKEKGA--IFI 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ V G ++ A G + + +N+ + D TCP V+KV V KH K D
Sbjct: 58 ED----LTDVPVGSYLIFSAHGVSKQVQQEAKERNLTVFDATCPLVTKVHLQVAKHAKED 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T M + E D NG E E K
Sbjct: 114 REVILIGHAGHPEVEGT------------MGQYERGTD-------NGGIYLVET-PEDVK 153
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K +PD DL V QTT+ +T+ +V+ R G++ + + IC
Sbjct: 154 NLAVK--NPD-DLAYV---TQTTLSMTDTK---IMVDALRARFKGIQEQKK-----DDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+Y++ + D+ILVV EIA+ G +Y ID+ K +
Sbjct: 200 YATQNRQDAVYELAK-TADIILVVGSPNSSNSNRLREIADQLGKQAYLIDTAKDM----- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++NW +G +G+T+GAS P+ V++V+ ++
Sbjct: 254 ------------QQNWF-EGVAVVGVTAGASAPEVLVQEVIDQL 284
>gi|385227239|ref|YP_005787163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SNT49]
gi|344332152|gb|AEN17182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SNT49]
Length = 274
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 158/342 (46%), Gaps = 75/342 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE--- 321
+AT Q A + +E VD+++VV G S + K++ ++ H E
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVV-----GGKTS---SNTKQL-----LSIAKQHCEDSY 232
Query: 322 LVEKENWLP----KGQITIGITSGASTPDKAVEDVLKKVFEI 359
LVE EN L K + GIT+GASTPD +E+V +K+ I
Sbjct: 233 LVEDENELELEWFKDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|219109330|pdb|3DNF|A Chain A, Structure Of (e)-4-hydroxy-3-methyl-but-2-enyl Diphosphate
Reductase, The Terminal Enzyme Of The Non-mevalonate
Pathway
gi|219109331|pdb|3DNF|B Chain B, Structure Of (e)-4-hydroxy-3-methyl-but-2-enyl Diphosphate
Reductase, The Terminal Enzyme Of The Non-mevalonate
Pathway
Length = 297
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 67/341 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V + +AE GFC+GV+RAV++A E+ K+ + K++ IIHNP RL+ + V
Sbjct: 2 VDIIIAEHAGFCFGVKRAVKLAEESLKE-SQGKVYTLGPIIHNPQEVNRLKNLGVFPSQG 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ GD V++ + G E+ L K ++++D TCP+V V +V + +
Sbjct: 61 EEFKE-------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREG 113
Query: 145 YTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y ++ G+ +H E + T + GK I+V+ +++ G + E
Sbjct: 114 YFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDI-------------GEALKHE--- 157
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+VGI QTT + EE K V + V+ V
Sbjct: 158 ------------------RVGIVAQTT----QNEEFFKEVVGEIA--LWVKEVK----VI 189
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPS--YWIDSEKRIGPGNKIAYKLM 318
NTIC+AT RQ+++ K+ E VD+++++ ++ G Y+I E N Y +
Sbjct: 190 NTICNATSLRQESVKKLAPE-VDVMIIIG-GKNSGNTRRLYYISKEL-----NPNTYHIE 242
Query: 319 HGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
E ++ E W +G +GI++GASTPD +E V ++ EI
Sbjct: 243 TAEELQPE-WF-RGVKRVGISAGASTPDWIIEQVKSRIQEI 281
>gi|51246018|ref|YP_065902.1| LytB protein [Desulfotalea psychrophila LSv54]
gi|71152179|sp|Q6AL80.1|ISPH_DESPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|50877055|emb|CAG36895.1| probable LytB protein [Desulfotalea psychrophila LSv54]
Length = 313
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 82/350 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GVERA++ A K+ E +++ +EI+HN V L + + V
Sbjct: 9 LEIRLASPRGFCAGVERAIETVKLALKEHGE-PVYVLHEIVHNRHVIDNLRQGGA--VFV 65
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + + G + + A G +++ ++ +D TCP VS V VEK+
Sbjct: 66 EE----LEQIPAGAICIFSAHGVSLQIEKRAKALGLKTIDATCPLVSSVHRMVEKYHAEG 121
Query: 145 YTSIIHGKYSHEETVATAS-FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ +I G + H E TA G+ +V EAE +L ++S K AF+
Sbjct: 122 CSVVIIGHHRHPEVEGTAGRVTGEVYVVATAAEAE---------KLQVNNSEKIAFV--- 169
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ + + E++ LV + R+F + + + I
Sbjct: 170 --------------------TQTTLAENDIEQV--LV--VLRRRFPLLQGPK-----SNI 200
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ+A+ + + DLILVV E+ + G P+Y ID K +
Sbjct: 201 CFATQNRQNAV-RTLARCTDLILVVGSKNSSNSNRLREVGTETGTPAYLIDDFKDL---- 255
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
KE+W +G +GIT+GAS P+ VE V+ V+ +KR
Sbjct: 256 -------------KESWF-RGCERVGITAGASAPESLVEGVV--VWLLKR 289
>gi|374609249|ref|ZP_09682045.1| hydroxymethylbutenyl pyrophosphate reductase [Mycobacterium tusciae
JS617]
gi|373552218|gb|EHP78828.1| hydroxymethylbutenyl pyrophosphate reductase [Mycobacterium tusciae
JS617]
Length = 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 150/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + I VE
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNVHVVETLAKAGA--IFVE 80
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY
Sbjct: 81 E----TDQVPEGSIVVFSAHGVAPTVHVEAAQRNLRTIDATCPLVTKVHNEAKRFARDDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ V + +A K
Sbjct: 137 DILLVGHTGHEEVVGTAGEAPDHVQVVDNPDA-------------------------VDK 171
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ DPD KV +QTT+ ET E V + E F +
Sbjct: 172 VTVR--DPD----KVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 212
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E LV+ + S + E + G+ AY + +
Sbjct: 213 DDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALNAGSDAAYLVDYA 268
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 269 DDIDPA-WL-DGVTTVGVTSGASVPELLVRGVLERLAE 304
>gi|451948858|ref|YP_007469453.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfocapsa sulfexigens DSM 10523]
gi|451908206|gb|AGF79800.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfocapsa sulfexigens DSM 10523]
Length = 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 145/342 (42%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA+ A K++ I++ +EI+HN V + LE M V +
Sbjct: 7 KIVLANPRGFCAGVDRAISTVKLAVKEYGS-PIYVLHEIVHNKHVVQELENMGVIFV--- 62
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
D+ K + + A G +VE + ++ +D TCP V V VEK+ Y
Sbjct: 63 --NDLVDIPRKA-ICIFSAHGVSVETEMRAKTLGLRTIDGTCPLVWSVHNMVEKYYADGY 119
Query: 146 TSIIHGKYSHEETVATAS-FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I G ++H E TA G +V + EA G E+
Sbjct: 120 DVMIIGHHNHPEVEGTAGRVLGNVHVVASEDEAR-------GVEVQ-------------- 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DPD +V QTT+ + + I ++ +F N+ + IC
Sbjct: 159 -------DPD----RVAYVTQTTLSQNDIAGI----RDVLLSRF--PNIKGQ---KSNIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+AM K + E D++LVV E+ E G+ Y ID E I
Sbjct: 199 YATLNRQEAMRK-IGESCDILLVVGSKNSSNSNRLREVGERAGMRGYLIDDESDI----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ WL KG TI IT+GAS P++ V+DV+K
Sbjct: 253 ------------EMKWL-KGVSTICITAGASAPERLVQDVIK 281
>gi|145222667|ref|YP_001133345.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum PYR-GCK]
gi|189045812|sp|A4T986.1|ISPH_MYCGI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|145215153|gb|ABP44557.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum PYR-GCK]
Length = 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 152/345 (44%), Gaps = 63/345 (18%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E T G +V LAE G+C GV+RAV+ A ++ I++ +EI+HN V L +
Sbjct: 18 ERTAGK-RVLLAEPRGYCAGVDRAVETVERALEKH-GAPIYVRHEIVHNRYVVDTLAKAG 75
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ +Q D V +G +VV A G A V +N++ +D TCP V+KV +
Sbjct: 76 AIFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAK 129
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ + DY ++ G HEE V TA A ++ V + +A D ++ + N
Sbjct: 130 RFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA---VDNVVVRDPN-------- 178
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
KV +QTT+ ET E V + E F
Sbjct: 179 --------------------KVIWLSQTTLSVDETMET-------------VRRLREKFP 205
Query: 259 SF-----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKI 313
+ + IC ATQ RQ A+ M E LV+ + S + E +G G++
Sbjct: 206 TLQDPPSDDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALGAGSRA 261
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
A+ + + E ++ WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 262 AHLVDYAEDIDPA-WL-DGVTTVGVTSGASVPEILVRGVLDRLAE 304
>gi|387813168|ref|YP_005428649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338179|emb|CCG94226.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 73/351 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ ++LA GFC GV+RA++I A F I++ +E++HN V L I V
Sbjct: 1 MHIRLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVDNLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 DE----LDEVPDDKLVIFSAHGVSQAVQNEAARRGLKVFDATCPLVTKVHMEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y D+ GG++ EA ++K +
Sbjct: 114 RECILIGHHGHPEVEGT---MGQY-------------DHSNGGDI--YLVEDEADVQKLE 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP ++ QTT+ +T ++++ + +E + + IC
Sbjct: 156 VK-----DPS----RLSFVTQTTLSMDDT---ARVIDALRAKFPKIEGPRK-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ + DL+LVV E+AE G P+Y ID +I P
Sbjct: 199 YATQNRQDAVKQLAGD-CDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAAQIEP--- 254
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
WL +G+ +G+T+GAS P+ V DV+ ++ E+ EE
Sbjct: 255 --------------QWL-EGKKAVGVTAGASAPEVLVADVIARLKELGGEE 290
>gi|404447454|ref|ZP_11012516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vaccae ATCC 25954]
gi|403648891|gb|EJZ04376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vaccae ATCC 25954]
Length = 337
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + +
Sbjct: 28 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV--- 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY
Sbjct: 84 ---EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLRTIDATCPLVTKVHNEAKRFARDDY 140
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE V TA A ++ +V N + V
Sbjct: 141 DILLVGHEGHEEVVGTAGEAPDHVQVVDNPDAVDNVTVR--------------------- 179
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DPD KV +QTT+ ET E V + E F +
Sbjct: 180 -------DPD----KVVWLSQTTLSVDETMET-------------VRRLREKFPTLQDPP 215
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ M E DL++VV S + E +G G++ A+ +
Sbjct: 216 SDDICYATQNRQVAVKAMAPE-CDLVIVV--GSKNSSNSVRL-VEVALGAGSEAAHLVDF 271
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 272 ADDIDPA-WL-DGVTTVGVTSGASVPEILVRGVLDRLAE 308
>gi|15606811|ref|NP_214191.1| LytB protein [Aquifex aeolicus VF5]
gi|8928180|sp|O67625.1|ISPH_AQUAE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|2984055|gb|AAC07596.1| LytB protein [Aquifex aeolicus VF5]
Length = 289
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 67/341 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V + +AE GFC+GV+RAV++A E+ K+ + K++ IIHNP RL+ + V
Sbjct: 2 VDIIIAEHAGFCFGVKRAVKLAEESLKE-SQGKVYTLGPIIHNPQEVNRLKNLGVFPSQG 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ GD V++ + G E+ L K ++++D TCP+V V +V + +
Sbjct: 61 EEFKE-------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREG 113
Query: 145 YTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y ++ G+ +H E + T + GK I+V+ +++ G + E
Sbjct: 114 YFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDI-------------GEALKHE--- 157
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+VGI QTT + EE K V + V+ V
Sbjct: 158 ------------------RVGIVAQTT----QNEEFFKEVVGEIA--LWVKEVK----VI 189
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPS--YWIDSEKRIGPGNKIAYKLM 318
NTIC+AT RQ+++ K+ E VD+++++ ++ G Y+I E N Y +
Sbjct: 190 NTICNATSLRQESVKKLAPE-VDVMIIIG-GKNSGNTRRLYYISKEL-----NPNTYHIE 242
Query: 319 HGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
E ++ E W +G +GI++GASTPD +E V ++ EI
Sbjct: 243 TAEELQPE-WF-RGVKRVGISAGASTPDWIIEQVKSRIQEI 281
>gi|118443423|ref|YP_878169.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
novyi NT]
gi|118133879|gb|ABK60923.1| rpsA [Clostridium novyi NT]
Length = 634
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 65/337 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LAE GFC+GV+RAV A ++ ++ I+ +IHN V + L+ + +I ++
Sbjct: 3 KILLAEKAGFCFGVKRAVDTAINFSNEY-KKPIYTLGPLIHNNDVVEFLKSKNITSIELD 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + + +GDV+++ + G + L +KN+ I D TCP+V+ + +V+K+ + Y
Sbjct: 62 E----LESLKEGDVIIIRSHGVTPNVIELLKDKNLIIADATCPYVAHIHETVKKYYELGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
II G SH E V + I+ K
Sbjct: 118 QIIIVGDKSHPEVVGINGYCNNTAIIS-------------------------------KD 146
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
++ PD KV I +QTT + E K+++K + + + +FNTIC+
Sbjct: 147 GLNIESLPD----KVCIVSQTT---EKQENFNKVIDK-------ITPLCKSLANFNTICN 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT+ RQ++ K+ +KVD ++V+ G S ++ K K +H VE
Sbjct: 193 ATKTRQESAEKL-SQKVDSMVVI-----GGYHSS--NTTKLYEICKKNCENTIH---VEN 241
Query: 326 ENWLPKGQI----TIGITSGASTPDKAVEDVLKKVFE 358
+ +P I +IG+T+GASTPD +++ + K+ E
Sbjct: 242 ASEIPNDLIENSNSIGVTAGASTPDWIIKEAISKMSE 278
>gi|392413492|ref|YP_006450099.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfomonile tiedjei DSM 6799]
gi|390626628|gb|AFM27835.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfomonile tiedjei DSM 6799]
Length = 582
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 76/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA++ GFC GV RAV + + ++ P I +IHNP L+ +Q +
Sbjct: 1 MKIRLAKTAGFCMGVRRAVDMVLDLQRAAPPLPIVTYGPLIHNPQTLNLLQSRGIQEV-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K D + G VV+ A G + +E L +K V I+D TCP V++V + KH
Sbjct: 59 ----KSLDEITGGTVVIR-AHGISPQEKQILASKGVGIIDATCPRVARVQAFIRKHAARG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+ +I G H E FA +V + + D I
Sbjct: 114 HFCVIVGDEDHPEVRGLMGFASAGGLVVPSADCNGLIDSI-------------------- 153
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+G + + QTT E +G+L + N +NTIC
Sbjct: 154 -PTDRG---------ICLVAQTTQEIEVFESVGEL----------LRNRCSELHEYNTIC 193
Query: 265 DATQERQDAMYKMVEE-----------KVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKI 313
D+T+ RQ + ++ + + +V++A+ +G+P+ +++++ + P + +
Sbjct: 194 DSTKRRQIEISRLARQVEMVVVVGGKGSGNTQRLVKVAQAQGVPALHVETDEEL-PSDAL 252
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
G T+G+T+GASTP+ + V ++ EI
Sbjct: 253 -----------------TGVRTVGVTAGASTPNWQIRQVTDRLKEI 281
>gi|404423699|ref|ZP_11005331.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403653454|gb|EJZ08435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 337
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 154/338 (45%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + +
Sbjct: 28 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNKHVVETLAKAGAVFV--- 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G A T +++Q++D TCP V+KV ++ + DY
Sbjct: 84 ---DETDEVPEGAIVVFSAHGVAPTVHETAAARSLQVIDATCPLVTKVHNEAKRFARDDY 140
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ V + +A K
Sbjct: 141 DILLIGHEGHEEVVGTAGEAPDHVQVVDNPDA-------------------------VDK 175
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ DP+ KV +QTT+ ET E V + E F +
Sbjct: 176 VTVR--DPN----KVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 216
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E +G G++ ++ + +
Sbjct: 217 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGSQASHLVDYA 272
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 273 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 308
>gi|313143831|ref|ZP_07806024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi CCUG 18818]
gi|402783610|ref|YP_006638941.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Helicobacter
cinaedi PAGU611]
gi|313128862|gb|EFR46479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi CCUG 18818]
gi|386780194|dbj|BAM15052.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Helicobacter
cinaedi PAGU611]
gi|396078549|dbj|BAM31925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi ATCC BAA-847]
Length = 273
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 78/343 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VKLA+ YGFC+GV+RA+ IA + + +IHN +RL++ N+ +
Sbjct: 1 MEVKLAKKYGFCFGVKRAINIAEKNKHA------TTFGPLIHNAKEIERLQKDF--NVSL 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E Q + +++ G ++ TL N+ + IVD TCP+V+K VEK
Sbjct: 53 SETLNQ---AQQFQSIIVRTHGITKGDLETLKNQQIHIVDATCPFVTKPQNIVEKMSNEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E + AS+ II +++E E V KFK
Sbjct: 110 YQIVIFGDSNHPEVMGVASYGEDVIIAGSVEELENV---------------------KFK 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTT---MLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K KV + +QTT L GE + F VNE + FN
Sbjct: 149 K-------------KVALVSQTTKQPKLFGE------------ITAFLATKVNECRV-FN 182
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
TIC+AT + Q A+ ++ E VD++++V KIA K
Sbjct: 183 TICNATFDNQSAVDELSRE-VDVMIIVGGKNSSNTKQLL-----------KIAQKYCENS 230
Query: 322 -LVEKENWLPKG----QITIGITSGASTPDKAVEDVLKKVFEI 359
LVE EN L + + G+++GASTPD +++V+ K+ +I
Sbjct: 231 YLVEDENELERAWFENKKLCGVSAGASTPDWIIQNVVAKIEQI 273
>gi|399543770|ref|YP_006557078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. BSs20148]
gi|399159102|gb|AFP29665.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. BSs20148]
Length = 316
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 79/350 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA+ I A F I++ +E++HN +V +L + I V
Sbjct: 1 MQIRLANPRGFCAGVDRAIDIVNRALDVF-GAPIYVRHEVVHNKSVVDKLRKRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V +V+ A G + ++ +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LSEVPDDKLVIFSAHGVSQAVQKEAADRGLKVFDATCPLVTKVHIEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G + H E T G+Y ++ GG++ +L + +
Sbjct: 114 SECVLIGHHGHPEVEGT---MGQY-------------NFANGGDI---------YLVENE 148
Query: 205 KAVSKGFD---PDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
V+K D P+ K+ QTT+ +T + + + G +
Sbjct: 149 ADVAK-LDVKNPE----KLAYVTQTTLSMDDTARVINALRAKFPKIEGPRK--------D 195
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ KM ++ DL+LVV E+AE G P+Y ID +I P
Sbjct: 196 DICYATQNRQDAVKKMADD-CDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAAQIDP 254
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL G+ +IG+T+GAS P+ V V+ ++ E+
Sbjct: 255 A-----------------WL-DGKKSIGVTAGASAPEVLVSAVIARLREL 286
>gi|386827199|ref|ZP_10114306.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Beggiatoa alba B18LD]
gi|386428083|gb|EIJ41911.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Beggiatoa alba B18LD]
Length = 322
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 79/345 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA+ GFC GV RAV+I +A +P +++ +EI+HN V L + +
Sbjct: 2 MNVTLAQPRGFCAGVVRAVEIVEQALMVYPH-PVYVLHEIVHNRYVVDDLRQKGAVFV-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V G V + A G A + N+ ++I+D TCP V+KV +++ +
Sbjct: 59 ----ESLDDVPLGAVCIFSAHGVARAVVNKAENRQLEIIDATCPLVTKVHQQAQRYAQQG 114
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y II G H E T G I+ + EA+ + ++N
Sbjct: 115 YEIIIIGHAGHPEVEGTRGRIDGIVHILSTVPEAQAL-------QVN------------- 154
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
D K+ QTT+ +T+++ + + G + + I
Sbjct: 155 ------------DPCKLAYVTQTTLSVDDTKDVIAFLNQRFPNIQGPQ--------LSDI 194
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ+A+ ++ ++ VDL+LVV E E GI SY I + P
Sbjct: 195 CYATQNRQNAVRELAKQ-VDLLLVVGASNSSNSNRLREAGEQAGITSYLIQDANDLKP-- 251
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W + Q IG+T+GAS P+ ++ VLK++
Sbjct: 252 ---------------EWF-QQQPKIGVTAGASAPEILIQGVLKRL 280
>gi|323527113|ref|YP_004229266.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|323384115|gb|ADX56206.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
Length = 319
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 79/354 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T AG+ + +V+++++ E +
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIEDVEAL----------------- 160
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
+ DP+ ++ QTT+ + EI +R + +
Sbjct: 161 -----------QLADPE----RIAFVTQTTLSVDDAAEI--------IRALKAKYPSIRE 197
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + D+++VV E+AE G+PSY +DS
Sbjct: 198 PKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPSYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 257 QIDPA-----------------WV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|392374111|ref|YP_003205944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Methylomirabilis oxyfera]
gi|258591804|emb|CBE68105.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Candidatus
Methylomirabilis oxyfera]
Length = 330
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 142/340 (41%), Gaps = 77/340 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA+ + A + +E +++ EI+HN V L + +
Sbjct: 5 KLILATPRGFCAGVDRAIDVVKIALDLY-DEPVYVRKEIVHNRHVVDELRKKGAIFV--- 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
D V G +V+ A G + E +K ++++D TCP V+KV K + +
Sbjct: 61 ---DDLDEVPDGALVIYSAHGVSPEVRAQAASKRLKVIDATCPLVTKVHNEAIKFAREGH 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+ I+ G H+E + T A I V + AE + ELN T
Sbjct: 118 SIILVGHKGHDEVIGTTGEAPDAITV--IGSAEQL------EELNVPDPT---------- 159
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV + QTT+ +T I + RKF F S IC
Sbjct: 160 -------------KVAVITQTTLSLDDTTGI----IDALRRKFPALA----FPSKEDICY 198
Query: 266 ATQERQDAMYKMVEEKVDLIL------------VVEIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQ A+ K + +VDLIL ++E+A+ G+ +Y ID I P
Sbjct: 199 ATQNRQTAL-KELASRVDLILALGSQNSSNSKRLIEVAKGVGVRAYLIDDVSEINPA--- 254
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G IG+T+GAS P+ V+ V+
Sbjct: 255 --------------WL-EGTRVIGVTAGASAPEHLVQGVV 279
>gi|315443130|ref|YP_004076009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum Spyr1]
gi|315261433|gb|ADT98174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum Spyr1]
Length = 333
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 150/345 (43%), Gaps = 63/345 (18%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E T G +V LAE G+C GV+RAV+ A ++ I++ +EI+HN V L +
Sbjct: 18 ERTAGK-RVLLAEPRGYCAGVDRAVETVERALEKH-GAPIYVRHEIVHNRYVVDTLAKAG 75
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ +Q D V +G +VV A G A V +N+Q +D TCP V+KV +
Sbjct: 76 AIFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLQTIDATCPLVTKVHNEAK 129
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ + DY ++ G HEE V TA A ++ V + +A D ++ + N
Sbjct: 130 RFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA---VDNVVVRDPN-------- 178
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
KV +QTT+ ET E V + E F
Sbjct: 179 --------------------KVIWLSQTTLSVDETMET-------------VRRLREKFP 205
Query: 259 SF-----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKI 313
+ + IC ATQ RQ A+ M E LV+ + S + E +G G+
Sbjct: 206 TLQDPPSDDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALGAGSHA 261
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
A+ + + E + WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 262 AHLVDYAEDTDPA-WL-DGVTTVGVTSGASVPEILVRGVLDRLAE 304
>gi|393777572|ref|ZP_10365863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
PBA]
gi|392715369|gb|EIZ02952.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
PBA]
Length = 329
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 90/366 (24%)
Query: 13 LKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNK 72
L+ + T + +V LA+ GFC GV+RA++I +A K+F I++ +EI+HN V
Sbjct: 9 LQTSANTVTAPDAEVVLAQPRGFCAGVDRAIEIVEQALKRF-GAPIYVRHEIVHNAYVVN 67
Query: 73 RLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 132
L + + ++ D V G V+ A G + + +++ D TCP V+K
Sbjct: 68 DLRQKGAVFV------QELDEVPTGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTK 121
Query: 133 VWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGS 192
V V K + D ++ G H E T M +A+ GG L
Sbjct: 122 VHVEVSKMRAQDCEIVMIGHKGHPEVEGT------------MGQAD-------GGMLLVE 162
Query: 193 SSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVEN 252
S A L+ +P+ ++ QTT+ ET EI V
Sbjct: 163 SVADVARLQV--------ANPE----RLAYVTQTTLSVDETREI-------------VAA 197
Query: 253 VNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRG 295
+ F + + IC ATQ RQDA+ K + +VD ++VV E+AE G
Sbjct: 198 LKARFPAISEPKKQDICYATQNRQDAV-KFMAPQVDAVIVVGSPNSSNSNRLREVAERLG 256
Query: 296 IPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKK 355
+P+Y D+ ++I ++ W+ G+ IG+T+GAS P+ + +
Sbjct: 257 VPAYLADAPEQI-----------------RDEWI-AGKRRIGVTAGASAPEVLAQSI--- 295
Query: 356 VFEIKR 361
V E++R
Sbjct: 296 VTELQR 301
>gi|358448468|ref|ZP_09158971.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
manganoxydans MnI7-9]
gi|357227256|gb|EHJ05718.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
manganoxydans MnI7-9]
Length = 317
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 149/352 (42%), Gaps = 83/352 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA++I A F I++ +E++HN V L I V
Sbjct: 1 MQIRLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVDNLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 DE----LDEVPDDKLVIFSAHGVSQAVQNEAARRGLKVFDATCPLVTKVHLEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G + H E T G+Y D+ GGE+ + ++A + K
Sbjct: 114 RECVLIGHHGHPEVEGT---MGQY-------------DHSNGGEIYLVENEEDAANLEVK 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENVNEHFIS 259
D K+ QTT+ +T + K E RK
Sbjct: 158 -----------DPAKLSYVTQTTLSMDDTARVIDALRAKFPEIQGPRK------------ 194
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ K + DL+LVV E+AE G P+Y ID +I
Sbjct: 195 -DDICYATQNRQDAV-KQLAGDCDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEASQI 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL +G+ ++G+T+GAS P+ V DV+ ++ E+
Sbjct: 253 DAA-----------------WL-EGKTSVGVTAGASAPEVLVNDVITRLREL 286
>gi|386751401|ref|YP_006224621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi417]
gi|384557659|gb|AFH98127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi417]
Length = 274
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E I FNTIC
Sbjct: 151 --------------KVVLVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCEDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|440509701|ref|YP_007347137.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia chromaiodes str. 640]
gi|440453914|gb|AGC03406.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia chromaiodes str. 640]
Length = 311
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 150/333 (45%), Gaps = 50/333 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA GFC GV RA+ I E Q I++ +E++HN V +L + V I
Sbjct: 1 MKVVLASPRGFCAGVNRAINIV-EKTIQVYGTPIYVRHELVHNDYVVTQLSKKGVIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V G V++ A G + + KN+ I+D TCP V+KV V + + D
Sbjct: 58 ----ERLNEVPNGSVLIFSAHGVSKKIREQSKIKNLIIIDATCPLVTKVHKEVSRANRND 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+YI V N ++ Y+ + S +A+ +
Sbjct: 114 MEVILIGHSGHPEVEGT---MGQYISV-NSRQKIYLVE-----------SQADAWSIQVN 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
F QTT+ +T EI ++ K G N IC
Sbjct: 159 HPNHLFF-----------VTQTTLSIDDTAEIIAILNKRFPNIMGPRK--------NDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVV-EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
AT RQ+A+ K + V++I VV I + ++ +RIG KI Y + H +
Sbjct: 200 YATFNRQNAL-KNLALMVEMIFVVGSITSSNSV--RLMELGRRIG---KITYLISHANDI 253
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+K NWL +G IGIT+GAS PD V V++K+
Sbjct: 254 QK-NWL-RGVNNIGITAGASAPDILVLQVIEKL 284
>gi|302391808|ref|YP_003827628.1| hydroxymethylbutenyl pyrophosphate reductase [Acetohalobium
arabaticum DSM 5501]
gi|302203885|gb|ADL12563.1| hydroxymethylbutenyl pyrophosphate reductase [Acetohalobium
arabaticum DSM 5501]
Length = 676
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 159/360 (44%), Gaps = 93/360 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP- 83
+++ LA+ GFC+GV RA+++ EA + EEK +IHNP RL+E+ V +
Sbjct: 1 MEIILADHAGFCFGVRRAMRLTMEAGEN-KEEKTRTLGPLIHNPQAVDRLQELGVGIVDT 59
Query: 84 ---VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
VEEG V++ + G E + +K++ I+D TCP+V K + K
Sbjct: 60 IEEVEEG-----------TVIIRSHGVPPEVLAKAEDKDLNILDATCPFVKKAQENASKL 108
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG-ELNGSSSTKEAF 199
+ Y I+ G H E A ILG + +E
Sbjct: 109 YQEGYQVIVSGDKKHPEVTA-----------------------ILGSTDHQAVVVEEEED 145
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
LEK K ++ KVG+ QTT +K E + KL+++T E
Sbjct: 146 LEKLPK----------NMDKVGVIAQTTQSIKKFKELVTKLMDRT-----------EELK 184
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+NTIC T ERQ A K+ E V L++V+ EI ++ G +Y +++ +
Sbjct: 185 IYNTICTTTHERQAAAGKLAAE-VGLMIVIGGYNSANTNRLAEICDEAGAKTYHVETAEE 243
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
+ +W + +G+T+GASTP+ +++V+ ++ +IK+EE ++
Sbjct: 244 L-----------------SRDWFYNIE-KVGVTAGASTPNWIIKEVVSRMEDIKKEENVE 285
>gi|220936376|ref|YP_002515275.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254806915|sp|B8GQR4.1|ISPH_THISH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|219997686|gb|ACL74288.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 310
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 154/344 (44%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA GFC GV+RA+ I A F + I++ +E++HN V + L + V
Sbjct: 1 MQVILANPRGFCAGVDRAIDIVERALTLFGK-PIYVRHEVVHNKFVVEDLRNKGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G V+ A G A + + +++ D TCP V+KV V++H +
Sbjct: 58 EE----LDEVPDGATVIFSAHGVARSVVQEAERRGLRVFDATCPLVTKVHMEVDRHARRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GGE+ + ++A + +
Sbjct: 114 EEVILIGHAGHPEVDGTL---GQY-------------DRSHGGEMYLVETVEDAERIQIR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+PD + QTT+ +T +I +T+ +F N + IC
Sbjct: 158 -------NPDA----LAYVTQTTLSVDDTLDI----IETLKNRFP----NIQGQKRDDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ E DL LVV EIAE G+ +Y +D+ +I
Sbjct: 199 YATQNRQDAVKQLASE-CDLFLVVGSPNSSNSNRLREIAEKLGVEAYLVDNAGQI----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ WL +G+ +G+T+GAS P+ V++V++ +
Sbjct: 253 ------------EDRWL-EGKTRVGVTAGASAPELLVQEVVEHL 283
>gi|114320015|ref|YP_741698.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alkalilimnicola
ehrlichii MLHE-1]
gi|114226409|gb|ABI56208.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alkalilimnicola
ehrlichii MLHE-1]
Length = 316
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 149/349 (42%), Gaps = 83/349 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA GFC GV+RA+ I A + F I++ +E++HN V L + + VE
Sbjct: 3 QVLLANPRGFCAGVDRAIDIVDRALELF-GAPIYVRHEVVHNRYVVNNLRDKGA--VFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G V+ A G + + +Q+ D TCP V+KV V+K+ +
Sbjct: 60 E----LDEVPDGATVIFSAHGVSQAVRREAERRGLQVFDATCPLVTKVHMEVQKYAREGR 115
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G H E T G+Y E G + +EK +
Sbjct: 116 EVVLIGHAGHPEVEGT---IGQY-------------------ERQGGAGGDIYLVEKPED 153
Query: 206 AVSKGF-DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+ DPD + QTT+ +T + ++ + E F +
Sbjct: 154 VQALVVRDPD----SLAFVTQTTLSMDDTANV-------------IDALRERFPNITGPR 196
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
N IC ATQ RQDA+ K + E+VDL+LVV E+AE +G+ ++ +D +++
Sbjct: 197 KNDICYATQNRQDAV-KQLAEQVDLMLVVGSPNSSNSNRLRELAERKGVEAHLVDGPEQL 255
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ WL +G+ IG+T+GAS P+ V VL ++
Sbjct: 256 -----------------QRAWL-EGRHAIGVTAGASAPEVLVRQVLDQL 286
>gi|334703294|ref|ZP_08519160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
caviae Ae398]
Length = 311
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKVVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENSEGGMYLVE-----------TPEDVARLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRAHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGAKAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P WL G IG+T+GAS PD V++V+ ++ E+
Sbjct: 252 EP-----------------QWL-DGVARIGVTAGASAPDVLVQNVIARLREL 285
>gi|269215387|ref|ZP_06159241.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia exigua
ATCC 700122]
gi|269130874|gb|EEZ61949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia exigua
ATCC 700122]
Length = 275
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 146/345 (42%), Gaps = 86/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV AE G C+GVERA+ + +A +E ++ +IHNP V +L++ V++I
Sbjct: 1 MKVVRAEHAGVCYGVERALDMVRDAMDG--DEDVFTIGPLIHNPRVVAQLKDHGVESI-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG D +VVL G + L+ + + +D TCP VS+ +
Sbjct: 57 -EGPADVD----HGIVVLRTHGVEPSVVEELDERGLSSIDATCPHVSRAQKAAADFAAQG 111
Query: 145 YTSIIHGKYSHEETVA-TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T ++ G+ SH E A AG ++V + E + ++ G
Sbjct: 112 MTVLVIGRASHPEVRGICAHAAGSAVVVADASE--------IPADIAG------------ 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
VGI QTT K + +E+ +R G+E V + NTI
Sbjct: 152 ---------------PVGIVVQTTENKSKLDEV-----VADLRGRGIEPVVK-----NTI 186
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT++RQDA + +KVD ++V+ EI SY I++E I P
Sbjct: 187 CSATRKRQDAAADLA-DKVDALVVIGGKNSSNTTHLFEICRAHCSRSYHIETEDEIDP-- 243
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W G +G+T+GASTPD+ +E V+ ++
Sbjct: 244 ---------------TWF-DGVEAVGVTAGASTPDEQIEAVVARI 272
>gi|418051821|ref|ZP_12689905.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
rhodesiae JS60]
gi|353184513|gb|EHB50040.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
rhodesiae JS60]
Length = 345
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 148/343 (43%), Gaps = 62/343 (18%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T G+ +V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L +
Sbjct: 31 TSGSKRVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVETLAKAGAV 89
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ +Q D V +G +VV A G A +N++ +D TCP V+KV ++
Sbjct: 90 FV------EQTDEVPEGAIVVFSAHGVAPTVHEEAAARNLKTIDATCPLVTKVHNEAKRF 143
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ DY ++ G HEE V TA A ++ V + +A
Sbjct: 144 ARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA----------------------- 180
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
VD V V N+ L T + + +E V + E F +
Sbjct: 181 --------------VDKVTVRDPNKVIWLSQTTLSVDETMET-------VRRLREKFPTL 219
Query: 261 -----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAY 315
+ IC ATQ RQ A+ M E DL++VV R + E + G+ A
Sbjct: 220 QDPPSDDICYATQNRQGAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALNAGSTAAK 275
Query: 316 KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ + E ++ WL G T+G+TSGAS P+ V VL ++ E
Sbjct: 276 LVDYAEDIDSA-WL-SGVTTVGVTSGASVPEVLVRGVLDRLAE 316
>gi|421717124|ref|ZP_16156431.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R037c]
gi|407218969|gb|EKE88787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R037c]
Length = 274
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + + I +IHN RL++ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLKKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ + K V++ G +++ L NK V+I D TCP+V K VE K
Sbjct: 53 EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S+A +V +N +E L++
Sbjct: 110 YQIVLFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + VE E + FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRV-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 NATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 241 --------ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 274
>gi|421718104|ref|ZP_16157404.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R038b]
gi|407222360|gb|EKE92161.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R038b]
Length = 270
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 85/343 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +EE
Sbjct: 1 MAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKIEEDP 52
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
K+ + K V++ G +++ L NK V+I D TCP+V K VE K Y +
Sbjct: 53 KK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIV 109
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G +H E S+A +V +N +E L++
Sbjct: 110 LFGDINHPEVKGVISYATNQALV-----------------INSLEELQEKKLQR------ 146
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
KV + +QT T++ KL++ + + VE E I FNTIC+AT
Sbjct: 147 ----------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTICNATS 186
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 YNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL--------- 236
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 237 ----ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 270
>gi|424589930|ref|ZP_18029377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1037(10)]
gi|408036092|gb|EKG72539.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1037(10)]
Length = 316
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
PG W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 255 PG-----------------WFVDAQL-IGVTAGASAPEELVNQILERIKEL 287
>gi|296272029|ref|YP_003654660.1| hydroxymethylbutenyl pyrophosphate reductase [Arcobacter
nitrofigilis DSM 7299]
gi|296096204|gb|ADG92154.1| hydroxymethylbutenyl pyrophosphate reductase [Arcobacter
nitrofigilis DSM 7299]
Length = 277
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 152/347 (43%), Gaps = 88/347 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+KVKLA SYGFC+GV+RA++IA E + +IHN RL+ + + N
Sbjct: 1 MKVKLASSYGFCFGVKRAIKIAEEYKNS------ATMGPLIHNTNEIDRLKNDYNVGLYN 54
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
D V D +++ G ++ L K+ ++++ TCP+V+ V+K
Sbjct: 55 --------SLDEVKDNDTIIIRTHGIPKFDLKNLKAKDAKVINATCPFVTTPQQIVKKMS 106
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
+Y+ +I G H E + S+A K+ + V + +LN
Sbjct: 107 AEEYSIVIFGDKDHPEVLGVQSYA---------KDQDDVFVILEPEDLNNI--------- 148
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
KFK + K+ QTT K + EI T++ K N+ FN
Sbjct: 149 KFKYS------------KIATIAQTTKKKEKYLEIV----NTLIPK------NKEVRVFN 186
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TICDAT E QDA ++ +E VD+++V+ I+++ I SY ++ E+ + P
Sbjct: 187 TICDATFENQDAARELSKE-VDIMIVIGGKNSSNTKQLLNISKENCIDSYLLEDERELDP 245
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W K + GIT+GASTPD ++ V+ +V
Sbjct: 246 -----------------KWF-KNKKLCGITAGASTPDWVIQKVVNQV 274
>gi|402829351|ref|ZP_10878227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia sp.
CM382]
gi|402284332|gb|EJU32835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia sp.
CM382]
Length = 275
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 146/345 (42%), Gaps = 86/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV AE G C+GVERA+ + +A +E ++ +IHNP V +L++ V++I
Sbjct: 1 MKVVRAEHAGVCYGVERALDMVRDAMDG--DEDVFTIGPLIHNPRVVAQLKDHGVESI-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG D +VVL G + L+ + + +D TCP VS+ +
Sbjct: 57 -EGPADVD----HGIVVLRTHGVEPSVVEELDERGLSSIDATCPHVSRAQKAAADFAAQG 111
Query: 145 YTSIIHGKYSHEETVA-TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T ++ G+ SH E A AG ++V + E + ++ G
Sbjct: 112 MTVLVIGRASHPEVRGICAHAAGSAVVVADASE--------IPADIAG------------ 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
VGI QTT K + +E+ +R G+E V + NTI
Sbjct: 152 ---------------PVGIVVQTTENKSKLDEV-----VADLRGRGIEPVVK-----NTI 186
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT++RQDA + +KVD ++V+ EI SY I++E I P
Sbjct: 187 CSATRKRQDAAADLA-DKVDALVVIGGKNSSNTTHLFEICRAHCSRSYHIETEDEIDPA- 244
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W G +G+T+GASTPD+ +E V+ ++
Sbjct: 245 ----------------WF-DGVEAVGVTAGASTPDEQIEAVVARI 272
>gi|227548173|ref|ZP_03978222.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079734|gb|EEI17697.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 317
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 155/341 (45%), Gaps = 77/341 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA G+C GV+RAV+ +A +++ +++ +I+HN V + LEE V I VEE
Sbjct: 8 VLLAAPRGYCAGVDRAVETVEKALEKY-GAPVYVRKQIVHNKYVVETLEERGV--IFVEE 64
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D V +G +V A G + + +N+ +D TCP V+KV ++ + Y
Sbjct: 65 T----DEVPEGAHLVFSAHGISPAVRESAIQRNLLTLDATCPLVTKVHNEAKRFARDGYQ 120
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G HEE TA EA V + G L+G +S +
Sbjct: 121 ILLVGHEGHEEVEGTAG------------EAPEVTHLVDG--LDGVASLPD--------- 157
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
F PD LV + +QTT+ ET EI V K R +EN + IC A
Sbjct: 158 ----FGPDQKLVWL---SQTTLSVDETMEI---VNKLFERFPHLENPPS-----DDICYA 202
Query: 267 TQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNKI 313
TQ RQ A+ K + K DL++V VE+A + G SY +D + I
Sbjct: 203 TQNRQVAV-KAIAPKCDLVIVVGSQNSSNSKRLVEVALEAGAKASYLVDFAREI------ 255
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E+WL +G +T+G+TSGAS P+ V +VL+
Sbjct: 256 -----------DESWL-EGVMTVGVTSGASVPEILVREVLE 284
>gi|299065961|emb|CBJ37142.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CMR15]
Length = 324
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A ++F I++ +EI+HN V L
Sbjct: 13 TGADAEVLLAQPRGFCAGVDRAIEIVERALQRF-GAPIYVRHEIVHNAYVVSDLRSKGAV 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 72 FV------QELDDVPVGGTVIFSAHGVSRAVRQAAEARGLRVFDATCPLVTKVHVEVSKM 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T G+ + E+
Sbjct: 126 RAQGFEIIMIGHKGHPEVEGTM------------------------GQADDGMLLVESVD 161
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ + AV D ++ QTT+ ET+EI V R V H
Sbjct: 162 DVARLAVK-------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 207 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 265
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 266 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
>gi|407714519|ref|YP_006835084.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
gi|407236703|gb|AFT86902.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
Length = 319
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 81/355 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T AG+ + +V+++++ E +
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIEDVEAL----------------- 160
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEH 256
+ DP+ ++ QTT+ + E IG L K ++ E
Sbjct: 161 -----------QLADPE----RIAFVTQTTLSVDDAAEIIGAL-------KAKYPSIREP 198
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQDA+ K + + D+++VV E+AE G+PSY +DS
Sbjct: 199 --KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPSYMVDSP 255
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 256 DQIDPA-----------------WV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|441214410|ref|ZP_20976120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis MKD8]
gi|440625257|gb|ELQ87108.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis MKD8]
Length = 314
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + +
Sbjct: 5 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVETLAKAGAIFV--- 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G A + +N++++D TCP V+KV ++ + DY
Sbjct: 61 ---DETDEVPEGAIVVFSAHGVAPTVHQSAAERNLKVIDATCPLVTKVHNEAKRFARDDY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ + ++G S +
Sbjct: 118 DILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGPESVDAVTVR---- 156
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V + E F +
Sbjct: 157 ----------DESKVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 193
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E +G G+ AY + +
Sbjct: 194 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALGAGSDAAYLVDYA 249
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G TIG+TSGAS P+ V VL+++ E
Sbjct: 250 DDIDPA-WL-DGVTTIGVTSGASVPEILVRGVLERLAE 285
>gi|83746662|ref|ZP_00943711.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum UW551]
gi|207742582|ref|YP_002258974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum IPO1609]
gi|300703311|ref|YP_003744913.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CFBP2957]
gi|421891054|ref|ZP_16321884.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum K60-1]
gi|421895432|ref|ZP_16325834.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum MolK2]
gi|83726615|gb|EAP73744.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum UW551]
gi|206586597|emb|CAQ17184.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum MolK2]
gi|206593976|emb|CAQ60903.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum IPO1609]
gi|299070974|emb|CBJ42283.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CFBP2957]
gi|378963640|emb|CCF98632.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum K60-1]
Length = 324
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A ++F I++ +EI+HN V L
Sbjct: 13 TEADAEVLLAQPRGFCAGVDRAIEIVERALQRF-GAPIYVRHEIVHNAYVVSDLRSKGAV 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 72 FV------QELDDVPVGGTVIFSAHGVSRAVRQAAEARGLRVFDATCPLVTKVHVEVSKM 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + ++ G H E T M +A+ D +L E +
Sbjct: 126 RAQGFEIVMIGHKGHPEVEGT------------MGQAD---DGMLLVE----------SV 160
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E + V K D ++ QTT+ ET+EI V R V H
Sbjct: 161 EDVARLVVK------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 207 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 265
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 266 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
>gi|126666686|ref|ZP_01737663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. ELB17]
gi|126628731|gb|EAZ99351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. ELB17]
Length = 318
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 75/348 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA+ I A F I++ +E++HN +V L + I V
Sbjct: 1 MQIRLANPRGFCAGVDRAIDIVNRALDVF-GAPIYVRHEVVHNKSVVDNLRKRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V +V+ A G + ++ +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LSEVPDDKLVIFSAHGVSQAVQKEAADRGLKVFDATCPLVTKVHIEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G + H E T G+Y ++ GG++ +L + +
Sbjct: 114 SECVLIGHHGHPEVEGT---MGQY-------------NFANGGDI---------YLVENE 148
Query: 205 KAVSKGFDPDV-DLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
V+K DV + K+ QTT+ ++ ++++ + +E + + I
Sbjct: 149 ADVAK---LDVKNPEKLAYVTQTTL---SMDDTARVIDALRAKFPKIEGPRK-----DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ +M +E DL+LVV E+AE G P+Y ID +I P
Sbjct: 198 CYATQNRQDAVKQMADE-CDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAAQIDPA- 255
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL G+ +IG+T+GAS P+ V V+ ++ E+
Sbjct: 256 ----------------WL-DGKKSIGVTAGASAPEVLVSAVIARLREL 286
>gi|296271021|ref|YP_003653653.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobispora bispora
DSM 43833]
gi|296093808|gb|ADG89760.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobispora bispora
DSM 43833]
Length = 323
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 152/343 (44%), Gaps = 72/343 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ A ++ I++ +I+HN V KRLEE I V+
Sbjct: 10 RVLLAKPRGYCAGVDRAVQTVELALDRY-GAPIYVRKQIVHNTHVVKRLEERGA--IFVD 66
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G +V+ A G A + ++ +D TCP V+KV ++ DY
Sbjct: 67 E----LDEVPDGAIVIFSAHGVAPTVHQEAAARGLKTIDATCPLVTKVHNEAKRFAAKDY 122
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T A +I ++ G L+G +
Sbjct: 123 DILLIGHAGHEEVEGTTGEAPDHI-------------RLVDG-LDGVDKVQVR------- 161
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+PD KV +QTT+ ET+E V + E F +
Sbjct: 162 ------NPD----KVVWLSQTTLSVDETKET-------------VARLRERFPNLIDPPS 198
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ K + + +L+LVV A + KR+ K AY
Sbjct: 199 DDICYATSNRQAAV-KRIAPQCELVLVVGSANS--------SNSKRLVEVAK-AYGAKAA 248
Query: 321 ELVE-----KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
LV+ +E WL +G T+G+TSGAS P++ V+ VLK++ E
Sbjct: 249 HLVDDASYIREEWL-EGVTTVGLTSGASVPEELVQGVLKRLAE 290
>gi|427429663|ref|ZP_18919650.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caenispirillum
salinarum AK4]
gi|425879900|gb|EKV28601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caenispirillum
salinarum AK4]
Length = 321
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 145/349 (41%), Gaps = 93/349 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GVERA+ I A +++ I++ +EI+HN V ++L V +
Sbjct: 3 MQVILAQPRGFCAGVERAIDIVERALRKY-GPPIYVRHEIVHNKHVVEQLRAKGVVFV-- 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V G V + A G A VE+M +K++ ++D TCP VSKV K+
Sbjct: 60 ----EDLDDVPPGVVTIFSAHGVARSVEDMAA--DKDLPVIDATCPLVSKVHIEGRKYAA 113
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
I+ G H E T G ++ +A +
Sbjct: 114 QGREVILIGHAGHPEVEGTVGQIPGTVHVISTADDARSL--------------------- 152
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF---- 257
+ DPD K+ QTT+ +T + V+ + E F
Sbjct: 153 -------QVADPD----KLAYVTQTTLSLDDTRGV-------------VDALKERFPAIA 188
Query: 258 -ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
+ IC ATQ RQ A+ +++ E+ DL+LVV EI E G+PSY I+
Sbjct: 189 GLDTKDICYATQNRQRAV-RVLAEQCDLLLVVGAANSSNSNRLREIGELMGVPSYLINDA 247
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ + P WL Q +G+T+GAS P+ VE ++
Sbjct: 248 RELDPA-----------------WLADKQ-KVGVTAGASAPEVLVEGLI 278
>gi|17547161|ref|NP_520563.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum GMI1000]
gi|20138571|sp|P58677.1|ISPH_RALSO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|17429463|emb|CAD16149.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum GMI1000]
Length = 324
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A ++F I++ +EI+HN V L
Sbjct: 13 TGADAEVLLAQPRGFCAGVDRAIEIVERALQRF-GAPIYVRHEIVHNAYVVSDLRSKGAV 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 72 FV------QELDDVPVGGTVIFSAHGVSRAVRQAAEARGLRVFDATCPLVTKVHVEVSKM 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T G+ + E+
Sbjct: 126 RTQGFEIIMIGHKGHPEVEGTM------------------------GQADDGMLLVESVD 161
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ + AV D ++ QTT+ ET+EI V R V H
Sbjct: 162 DVARLAVK-------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 207 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 265
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 266 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
>gi|379710741|ref|YP_005265946.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
cyriacigeorgica GUH-2]
gi|374848240|emb|CCF65312.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
cyriacigeorgica GUH-2]
Length = 318
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+ +V LAE G+C GV+RAV+ +A + I++ EI+HN V + L E V I
Sbjct: 6 GDKRVLLAEPRGYCAGVDRAVETVEKALDKH-GAPIYVRKEIVHNRHVVETLRERGV--I 62
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G ++V A G + + +N++ +D TCP V+KV ++ +
Sbjct: 63 FVDE----TDEVPEGALLVFSAHGVSPAVHSSAAARNLRTIDATCPLVTKVHQEAKRFAR 118
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A ++ + ++G + + +
Sbjct: 119 DDYDILLIGHEGHEEVEGTAGEAPDHVQL-----------------VDGPDAVDKVTVR- 160
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
D KV +QTT+ ET E V + R G+++ +
Sbjct: 161 -------------DESKVIWLSQTTLSVDETMET---VSRLRERFPGLQDPPS-----DD 199
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC ATQ RQ A+ M E DL++VV R + E +G G K AY + +
Sbjct: 200 ICYATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALGAGAKAAYLVDYARE 255
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ WL +G TIGITSGAS P+ V VL + E
Sbjct: 256 VDP-AWL-EGVRTIGITSGASVPEILVRGVLDMLEE 289
>gi|167950718|ref|ZP_02537792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 389
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 149/352 (42%), Gaps = 86/352 (24%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA++I A I++ +E++HN V + L + I V+
Sbjct: 3 KIILANPRGFCAGVDRAIEIVQRALDML-GAPIYVRHEVVHNRFVVESLRQRGA--IFVD 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + G+ V+ A G + ++++I D TCP V+KV V + + Y
Sbjct: 60 E----LSDIPDGNTVIFSAHGVSQTVRQEAQRRDLRIFDATCPLVTKVHLEVARRCRDGY 115
Query: 146 TSIIHGKYSHEETVATASF------AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E V T + + +V + E +L S S++ AF
Sbjct: 116 EVILIGHRGHPEVVGTMGQCRSKEESARIHLVVTPSDVE---------QLQISDSSRVAF 166
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF-GVENVNEHFI 258
+ QTT+ +T LV + ++F +E +
Sbjct: 167 V-----------------------TQTTLSIDDT----ALVIAALQQRFPNIEGPKK--- 196
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
N IC ATQ RQDA+ K + E+ DL+LVV EIA P+Y ID +
Sbjct: 197 --NDICYATQNRQDAV-KELAEQCDLVLVVGSPNSSNSNRLCEIARRHSTPAYLIDGAED 253
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
I +WL G+ IG+++GAS P+ VE VL+++ E
Sbjct: 254 I-----------------DRSWL-AGKARIGVSAGASAPEVLVERVLERLQE 287
>gi|158312701|ref|YP_001505209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
EAN1pec]
gi|158108106|gb|ABW10303.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EAN1pec]
Length = 338
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 146/341 (42%), Gaps = 78/341 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ +A + +++ +I+HN V K LE A I VE
Sbjct: 21 RVLLAKPRGYCAGVDRAVQTVEKALDLY-GSPVYVRKQIVHNAHVVKTLE--AKGAIFVE 77
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G VV A G A +++ ++ +D TCP V+KV + + K D
Sbjct: 78 E----TDEVPHGATVVFSAHGVAPTVHEEASSRQLRTIDATCPLVTKVHSEARRFAKEDL 133
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V T A I +++ G +
Sbjct: 134 DILLIGHEGHEEVVGTTGQAPDRI-------------HLVDGPEDA-------------- 166
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
A K DP +V +QTT+ ET+ K + + G + + IC
Sbjct: 167 AAVKVRDPK----RVAFLSQTTLSVDETQTTVKALRERFPHLQGPPS--------DDICY 214
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K + EKVDL++V VE+A D G P S+ +D +
Sbjct: 215 ATQNRQVAV-KEIAEKVDLLIVVGSPNSSNSVRLVEVALDAGAPKSFLVDDCSEV----- 268
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
E WL G T+G+TSGAS P++ V V+
Sbjct: 269 ------------DEGWL-DGVETVGVTSGASVPEELVTGVM 296
>gi|257458043|ref|ZP_05623202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
vincentii ATCC 35580]
gi|257444756|gb|EEV19840.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
vincentii ATCC 35580]
Length = 333
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 84/344 (24%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVE 85
VK A+ G+C GV RAV Y A +P++ ++ +IHNP + LE V + P E
Sbjct: 48 VKRAQVLGYCMGVRRAVDAVYRALADYPDKTVYTYGPLIHNPVTMRLLEAKGVHIVNPDE 107
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E K Q + +++ A G + ++ L + I+D TCP V ++ + Y
Sbjct: 108 ELKPQIIPQSP---IIIRAHGISPQKRQELIDCGAIIIDATCPKVIASQFKAAQYSQKGY 164
Query: 146 TSIIHGKYSHEETVATASFA-----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
T I+ G +H E + + GK I V+ EAE + D +G+ +
Sbjct: 165 TVILAGDRNHGELIGIRGYVLSVPNGKCITVQTAAEAETLQD-------DGAPTV----- 212
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ QTT+ + E I ++ K + H
Sbjct: 213 ---------------------LIAQTTIKRDEYRAIADILHKKIA----------HLTVL 241
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
TIC AT ERQ+A+ ++V+E VD ILVV + A D G P++ ++ I
Sbjct: 242 ETICSATDERQEALLELVKE-VDAILVVGGSNSANTRRLLQTAVDSGKPAWLAETAADI- 299
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
P Y TIG+ +GASTPD +++ +
Sbjct: 300 PSEVCCYH------------------TIGLAAGASTPDSSIDTI 325
>gi|208434950|ref|YP_002266616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori G27]
gi|420426583|ref|ZP_14925636.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-9]
gi|208432879|gb|ACI27750.1| isoprenyl pyrophosphate and dimethyl allyldiphosphate synthetase
[Helicobacter pylori G27]
gi|393044011|gb|EJB45008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-9]
Length = 270
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 85/343 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +EE
Sbjct: 1 MAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKIEEDP 52
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
K+ + K V++ G +++ L NK V+I D TCP+V K VE K Y +
Sbjct: 53 KK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIV 109
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G +H E S+A +V +N +E L++
Sbjct: 110 LFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR------ 146
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
KV + +QT T++ KL++ + + VE E I FNTIC+AT
Sbjct: 147 ----------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTICNATS 186
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 YNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL--------- 236
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 237 ----ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 270
>gi|292491349|ref|YP_003526788.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
halophilus Nc4]
gi|291579944|gb|ADE14401.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
halophilus Nc4]
Length = 320
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 55/344 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RA+ I A + + I++ +EI+HN V + L++ V I
Sbjct: 1 MKVTLAQPRGFCAGVVRAIDIVERALEIY-GAPIYVLHEIVHNQHVVEDLQQRGV--IFT 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + G V + A G A + N+Q++D TCP V+KV +K+ +
Sbjct: 58 ED----LVSIPPGSVTIFSAHGVATAVVEAAKENNLQVIDATCPLVTKVHLQAQKYHRHG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
II G H E T G ++ +++EAE + +
Sbjct: 114 NELIIIGHSGHPEVEGTRGRVEGPVYVLDSVEEAEKL---------------------EI 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K DP+ V QTT+ +T ++ ++K + G E + I
Sbjct: 153 K-------DPE----HVAYVTQTTLSIDDTRDVVDALKKRFPKIHGPE--------LDDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ+A+ +M +E +D++LVV S + + +G N + L+
Sbjct: 194 CYATQNRQNAVREMSKE-IDILLVVGARN-----SSNSNRLREVGEQNGVIAHLIQDTKD 247
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+W Q +G+T+GASTP+ V+ VL K+ + EE L
Sbjct: 248 LDSSWFTP-QSRVGVTAGASTPEVLVQGVLNKLRDYGVEEVQDL 290
>gi|120553797|ref|YP_958148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
aquaeolei VT8]
gi|166217172|sp|A1TYZ2.1|ISPH_MARAV RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|120323646|gb|ABM17961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
aquaeolei VT8]
Length = 316
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 73/356 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA++I A F I++ +E++HN V L I V
Sbjct: 1 MQIRLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVDNLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 DE----LGEVPDDKLVIFSAHGVSQAVQNEAARRGLKVFDATCPLVTKVHMEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y D+ GG++ EA ++K +
Sbjct: 114 RECILIGHHGHPEVEGT---MGQY-------------DHSNGGDI--YLVEDEADVQKLE 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP ++ QTT+ ++ ++++ + +E + + IC
Sbjct: 156 VK-----DPS----RLSFVTQTTL---SMDDTARVIDALRAKFPQIEGPRK-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + D++LVV E+AE G P+Y ID +I P
Sbjct: 199 YATQNRQDAV-KQLAGDCDIMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAAQIDPA-- 255
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
WL G+ IG+T+GAS P+ V DV+K++ + EE ++++
Sbjct: 256 ---------------WL-YGKKAIGVTAGASAPEVLVADVIKRLKALGGEEPVEVS 295
>gi|416157809|ref|ZP_11605332.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 101P30B1]
gi|416228140|ref|ZP_11627470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 46P47B1]
gi|326564252|gb|EGE14486.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 46P47B1]
gi|326573558|gb|EGE23521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 101P30B1]
Length = 313
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 89/349 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
+K+ LA GFC GV+RA+ I EA ++F I++ +E++HN V +E++A + +
Sbjct: 1 MKILLANPRGFCAGVDRAIAIVNEALRRF-NPPIYVRHEVVHNKFV---VEDLARRGAVF 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
VEE D V G +V+ A G AVE+ +++ + D TCP V+KV V K
Sbjct: 57 VEE----LDEVPDGAIVIFSAHGVSKAVED--EAKRRDLTVFDATCPLVTKVHIEVGKFA 110
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
KG +I+ G H E T G++ D GG ++ +E
Sbjct: 111 KGGMDAILIGHAGHPEVEGTM---GRF-------------DTSFGGRIH--------LVE 146
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ F+ D L V QTT+ +T + ++ + + F + N
Sbjct: 147 DVEDVAKLDFERDKSLAFV---TQTTLSMDDTANV-------------IDALKDRFPAIN 190
Query: 262 T-----ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQDA+ K++ +++LVV E+AE G +Y ID+
Sbjct: 191 APRKDDICYATQNRQDAV-KLLSRHCEVVLVVGSPNSSNSNRLRELAERMGRRAYLIDNA 249
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
++ + W +G +G+T+GAS P+ +++VL
Sbjct: 250 GQM-----------------SQAWF-EGVTYVGVTAGASAPEILIQEVL 280
>gi|225874868|ref|YP_002756327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidobacterium
capsulatum ATCC 51196]
gi|225792401|gb|ACO32491.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidobacterium
capsulatum ATCC 51196]
Length = 338
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 147/344 (42%), Gaps = 77/344 (22%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV L + GFC GV RAV I A + F I++ EI+HN V L E I
Sbjct: 18 GERKVLLLKPRGFCAGVVRAVDIVRIALETF-GAPIYVRKEIVHNRFVVNELAEKGA--I 74
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VE+ D V +G V+ A G + ++N++++D TCP V+KV K +
Sbjct: 75 FVED----IDQVPEGSRVIYSAHGVSPAVRQQSKDRNLRVIDATCPLVTKVHVEAVKFAR 130
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y+ ++ G HEE T + EA V + SS+ + A LE
Sbjct: 131 QGYSLVLIGHRDHEEIEGT------------LGEAPDVTTVV-------SSAAEVAALEV 171
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
PD + +V QTT+ E ++ + ++K G +
Sbjct: 172 ----------PDPN--RVAYLTQTTLSLDEARDMIEALKKKFPNIVGPHS--------QD 211
Query: 263 ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPG 310
IC AT+ RQ A+ K V + DL+LV VE++ + G Y ID+ K I P
Sbjct: 212 ICYATENRQVAV-KNVAHQADLVLVVGSNNSSNSNRLVEVSRNLGTKGYLIDNSKAIRP- 269
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL +G T+ +T+GAS P+ VEDV+K
Sbjct: 270 ----------------EWL-EGVATVAVTAGASAPEVLVEDVVK 296
>gi|296112581|ref|YP_003626519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
gi|416216907|ref|ZP_11623941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 7169]
gi|416225923|ref|ZP_11627022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 103P14B1]
gi|416233665|ref|ZP_11629409.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 12P80B1]
gi|416237205|ref|ZP_11630722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC1]
gi|416242091|ref|ZP_11633225.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC7]
gi|416247149|ref|ZP_11635455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC8]
gi|416251374|ref|ZP_11637684.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis CO72]
gi|416254006|ref|ZP_11638463.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis O35E]
gi|421779397|ref|ZP_16215889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
gi|295920275|gb|ADG60626.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BBH18]
gi|326560165|gb|EGE10554.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 103P14B1]
gi|326561344|gb|EGE11702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 7169]
gi|326566198|gb|EGE16351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 12P80B1]
gi|326569742|gb|EGE19792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC8]
gi|326570773|gb|EGE20798.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC1]
gi|326571652|gb|EGE21667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC7]
gi|326573036|gb|EGE23012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis CO72]
gi|326577703|gb|EGE27579.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis O35E]
gi|407813107|gb|EKF83889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
Length = 313
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 89/349 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
+K+ LA GFC GV+RA+ I EA ++F I++ +E++HN V +E++A + +
Sbjct: 1 MKILLANPRGFCAGVDRAIAIVNEALRRF-NPPIYVRHEVVHNKFV---VEDLARRGAVF 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
VEE D V G +V+ A G AVE+ +++ + D TCP V+KV V K
Sbjct: 57 VEE----LDEVPDGAIVIFSAHGVSKAVED--EAKRRDLTVFDATCPLVTKVHIEVGKFA 110
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
KG +I+ G H E T G++ D GG ++ +E
Sbjct: 111 KGGMDAILIGHAGHPEVEGTM---GRF-------------DTSFGGRIH--------LVE 146
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ F+ D L V QTT+ +T + ++ + + F + N
Sbjct: 147 DVEDVAKLDFERDKSLAFV---TQTTLSMDDTANV-------------IDALKDRFPAIN 190
Query: 262 T-----ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQDA+ K++ +++LVV E+AE G +Y ID+
Sbjct: 191 APRKDDICYATQNRQDAV-KLLSRHCEVVLVVGSPNSSNSNRLRELAERMGRRAYLIDNA 249
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
++ + W +G +G+T+GAS P+ +++VL
Sbjct: 250 GQM-----------------SQAWF-EGVTYVGVTAGASAPEILIQEVL 280
>gi|147673232|ref|YP_001216180.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O395]
gi|227117060|ref|YP_002818956.1| lytB protein [Vibrio cholerae O395]
gi|146315115|gb|ABQ19654.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae O395]
gi|227012510|gb|ACP08720.1| lytB protein [Vibrio cholerae O395]
Length = 320
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 155/351 (44%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
PG + +L IG+T+GAS P++ V +L+++ E+
Sbjct: 259 PGGFVDAQL------------------IGVTAGASAPEELVNQILERIKEL 291
>gi|182420544|ref|ZP_02951677.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens NCTC 8239]
gi|182379882|gb|EDT77361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens NCTC 8239]
Length = 282
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 155/345 (44%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE+ + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D + KGDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 A----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDENHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++R V++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVR------VSKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+ E V+ TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 --LLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
>gi|423203546|ref|ZP_17190124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER39]
gi|404612841|gb|EKB09898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER39]
Length = 311
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 157/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + T E +
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENHEGGMYLVE------------TPEDVAKLRV 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
K +PD DL V QTT+ ET ++ ++ + +HF +
Sbjct: 156 K------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRKHFPNIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGAKAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
G WL +G IG+T+GAS PD V++V+ ++ E+
Sbjct: 252 ETG-----------------WL-EGVKAIGVTAGASAPDILVQNVIARLREL 285
>gi|383807686|ref|ZP_09963246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Aquiluna sp. IMCC13023]
gi|383299040|gb|EIC91655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Aquiluna sp. IMCC13023]
Length = 338
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 151/334 (45%), Gaps = 54/334 (16%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T N KV LA G+C GV+RAV IA E +++ +I+HN V + LE
Sbjct: 13 TGSNKKVLLAAPRGYCAGVDRAV-IAVEKALDHYGAPVYVRKQIVHNKHVVRSLERRGA- 70
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I VEE D +G V++ A G + + ++N Q +D TCP V+KV V++
Sbjct: 71 -IFVEE----VDEAPEGCVMIFSAHGVSPAVVAMAESRNQQTIDATCPLVTKVHREVQRF 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+K Y ++ G HEE TA +A + I G + + K
Sbjct: 126 EKEGYDILLVGHEGHEEVEGTAG------------QAPGIVQLIDGNDDIAKAKVK---- 169
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFIS 259
DP KV +QTT+ ET E + K+ EK + +EN
Sbjct: 170 -----------DPS----KVIWLSQTTLSVDETMETVLKIREKYPL----LENPPS---- 206
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ K+ + DL++VV A E + G K AY++
Sbjct: 207 -DDICYATQNRQVAIKKIGADS-DLVIVVGSANSSNTVRLV---EVALEAGAKAAYRVDF 261
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+E E+W +G T+G++SGAS P++ V DVL
Sbjct: 262 ASEIE-ESWF-EGVATVGVSSGASVPEELVSDVL 293
>gi|345879180|ref|ZP_08830853.1| hypothetical protein Rifp1Sym_dr00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223812|gb|EGV50242.1| hypothetical protein Rifp1Sym_dr00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 313
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 150/352 (42%), Gaps = 86/352 (24%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA++I A I++ +E++HN V + L + I V+
Sbjct: 3 KIILANPRGFCAGVDRAIEIVQRALDML-GAPIYVRHEVVHNRFVVESLRQRGA--IFVD 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + G+ V+ A G + ++++I D TCP V+KV V + + Y
Sbjct: 60 E----LSDIPDGNTVIFSAHGVSQTVRQEAQRRDLRIFDATCPLVTKVHLEVARRCRDGY 115
Query: 146 TSIIHGKYSHEETVATASF------AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E V T + + +V + E +L S S++ AF
Sbjct: 116 EVILIGHRGHPEVVGTMGQCRSKEESARIHLVVTPSDVE---------QLQISDSSRVAF 166
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF-GVENVNEHFI 258
+ QTT+ +T LV + ++F +E +
Sbjct: 167 V-----------------------TQTTLSIDDT----ALVIAALQQRFPNIEGPKK--- 196
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
N IC ATQ RQDA+ K + E+ DL+LVV EIA+ P+Y ID +
Sbjct: 197 --NDICYATQNRQDAV-KELAEQCDLVLVVGSPNSSNSNRLCEIAKKHSTPAYLIDGAED 253
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
I +WL G+ IG+++GAS P+ VE VL+++ E
Sbjct: 254 I-----------------DRSWL-AGKARIGVSAGASAPEVLVERVLERLQE 287
>gi|325109982|ref|YP_004271050.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Planctomyces
brasiliensis DSM 5305]
gi|324970250|gb|ADY61028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Planctomyces
brasiliensis DSM 5305]
Length = 379
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 80/356 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV A+Q E + F + I + +EI+HN V +R ++ V+ +
Sbjct: 68 MKILLANPRGFCAGVNMAIQCLEECVRMF-GDNIHVYHEIVHNKYVVERFTKLGVRFV-- 124
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V +G ++V A G + ++ +Q +D TCP V+KV ++ +
Sbjct: 125 ----DEVSDVPEGAILVYSAHGVSPAIRQQARDRKLQTIDATCPLVTKVHMEAIRYARQG 180
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G H+E V T A + I + + E +EK
Sbjct: 181 YNIVLIGHEGHDEVVGTMGEAPESITLVDTPED----------------------VEKL- 217
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
F PD K+ QTT+ EE G+L+ K R +E+ + IC
Sbjct: 218 -----SFAPD---AKLAYLTQTTL---SVEEAGRLIAKLKERYPQIESPPK-----EDIC 261
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ E+ D++LV+ EIA+ G P+Y ID I
Sbjct: 262 YATTNRQHAVAQLT-ERADVVLVLGSQNSSNSQRLKEIAKSLGRPAYLIDGAGEI----- 315
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV---LKKVFEIKREEAL 365
+E+W + + IT+GAS P+ V++V LK F + EE +
Sbjct: 316 ------------QEDWFTEDN-NVLITAGASAPEVVVQEVVDYLKTTFNAELEEVV 358
>gi|385330256|ref|YP_005884207.1| hydroxymethylbutenyl pyrophosphate reductase [Marinobacter
adhaerens HP15]
gi|311693406|gb|ADP96279.1| hydroxymethylbutenyl pyrophosphate reductase [Marinobacter
adhaerens HP15]
Length = 317
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 83/352 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA GFC GV+RA++I A F I++ +E++HN V L +
Sbjct: 1 MQIRLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVDNLRNRGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 ----DELDEVPDDKLVIFSAHGVSQAVQNEAARRGLKVFDATCPLVTKVHLEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G + H E T G+Y D+ GGE+ + ++ + K
Sbjct: 114 RECVLIGHHGHPEVEGT---MGQY-------------DHSNGGEIYLVENEEDVANLEVK 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENVNEHFIS 259
DP K+ QTT+ +T + K E RK
Sbjct: 158 -------DPG----KLSYVTQTTLSMDDTARVIDALRAKFPEIQGPRK------------ 194
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ K + DL+LVV E+AE G P+Y ID +I
Sbjct: 195 -DDICYATQNRQDAV-KQLAGDCDLMLVVGSPNSSNSNRLRELAERMGTPAYLIDEASQI 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P WL +G+ ++G+T+GAS P+ V +V+ ++ E+
Sbjct: 253 DPA-----------------WL-EGKTSVGVTAGASAPEVLVNEVITRLREL 286
>gi|262169984|ref|ZP_06037674.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC27]
gi|262021718|gb|EEY40429.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC27]
Length = 316
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 155/351 (44%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
PG + +L IG+T+GAS P++ V +L+++ E+
Sbjct: 255 PGGFVDAQL------------------IGVTAGASAPEELVNQILERIKEL 287
>gi|350544830|ref|ZP_08914374.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527380|emb|CCD38219.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Burkholderia kirkii UZHbot1]
Length = 322
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 155/348 (44%), Gaps = 77/348 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+V++ LA+ GFC GV+RA++I A K F I++ +EI+HN V + L + I
Sbjct: 13 DVEILLAQPRGFCAGVDRAIEIVERAIKFF-GAPIYVRHEIVHNAYVVEDLRKKGAIFI- 70
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ V +G ++ A G + + +++ D TCP V+KV V K ++
Sbjct: 71 -----EELADVPEGATLIFSAHGVSKAVRGEAEARGLRVFDATCPLVTKVHMEVAKMRQE 125
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ ++ G H E T +G+ + + +++ E V L
Sbjct: 126 GFDIVMIGHKGHPEVEGTMGQSGEGMHL--VEDIENVLKLALP----------------- 166
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DP+ ++ QTT+ ++ +++ + G++ + I
Sbjct: 167 --------DPE----RIAYVTQTTL---SVDDASAIIDALKTKYPGIKEPKKQ-----DI 206
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + + D+++VV E+AE RGIPSY +DS +I P
Sbjct: 207 CYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNSSRLREVAEKRGIPSYMVDSPTQIDP-- 263
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 264 ---------------KWV-EGKKRIGVTAGASAPEVLAQAVIARLREL 295
>gi|269958672|ref|YP_003328459.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
centrale str. Israel]
gi|269848501|gb|ACZ49145.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
centrale str. Israel]
Length = 333
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 82/362 (22%)
Query: 9 IIKKLKENGF---EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEI 64
++ + + GF + GNV+V LA GFC GVERAV+ ++ + ++ +EI
Sbjct: 8 VMLRSRSGGFFRRGFMLGNVEVILARPRGFCAGVERAVRTLESVASRYAGTREVYALHEI 67
Query: 65 IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
+HN V ++M V+ + V +G V+V A G + + K + +VD
Sbjct: 68 VHNLHVVNSFKKMGVKFV------SALHEVPEGAVLVFSAHGVSQQVKEESRRKGLTVVD 121
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDY 183
TCP V+KV ++++ K Y I+ G H E + + ++V+N+++ +
Sbjct: 122 ATCPLVTKVHLEIQRYDKSGYQVILVGHKGHREVEGSMGQVSNPVVLVQNVQDVQ----- 176
Query: 184 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 243
+ S+ K A++ QTT+ +T EI ++
Sbjct: 177 ----SIKIPSAAKLAYV-----------------------TQTTLSMDDTAEIISALKLR 209
Query: 244 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIA 291
R G + IC ATQ RQ A+ K + + VD++L + ++A
Sbjct: 210 FPRIVGPD--------LRDICYATQNRQTAV-KAMSQMVDVVLAIGSKNSSNSNRLLDLA 260
Query: 292 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 351
+ + +Y IDS + I WL G IGIT+GAS P+ V++
Sbjct: 261 KAQNARAYLIDSYRNI-----------------DLEWLI-GARRIGITAGASAPEILVQE 302
Query: 352 VL 353
V+
Sbjct: 303 VI 304
>gi|56416914|ref|YP_153988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
marginale str. St. Maries]
gi|71152167|sp|Q5PAE7.1|ISPH_ANAMM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|56388146|gb|AAV86733.1| lytB protein [Anaplasma marginale str. St. Maries]
Length = 342
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 82/362 (22%)
Query: 9 IIKKLKENGF---EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEI 64
++ + + GF + GNV+V LA GFC GVERAV+ ++ + ++ +EI
Sbjct: 17 VMLRSRSGGFFRRGFMLGNVEVILARPRGFCAGVERAVRTLESVASRYAGTREVYALHEI 76
Query: 65 IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
+HN V ++M V+ + V +G V+V A G + + K + +VD
Sbjct: 77 VHNLHVVNSFKKMGVKFV------SALHEVPEGAVLVFSAHGVSQQVKEESRRKGLTVVD 130
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDY 183
TCP V+KV ++++ K Y I+ G H E + + ++V+N+++ +
Sbjct: 131 ATCPLVTKVHLEIQRYDKSGYQVILVGHKGHREVEGSMGQVSNPVVLVQNVQDVQ----- 185
Query: 184 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 243
+ S+ K A++ QTT+ +T EI ++
Sbjct: 186 ----SIKIPSAAKLAYV-----------------------TQTTLSMDDTAEIISALKLR 218
Query: 244 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIA 291
R G + IC ATQ RQ A+ K + + VD++L + ++A
Sbjct: 219 FPRIVGPD--------LRDICYATQNRQTAV-KAMSQMVDVVLAIGSKNSSNSNRLLDLA 269
Query: 292 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 351
+ + +Y IDS + I WL G IGIT+GAS P+ V++
Sbjct: 270 KAQNARAYLIDSYRNI-----------------DLEWLI-GARRIGITAGASAPEILVQE 311
Query: 352 VL 353
V+
Sbjct: 312 VI 313
>gi|421880971|ref|ZP_16312323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CCUG 35545]
gi|375316724|emb|CCF80319.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CCUG 35545]
Length = 274
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 85/346 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+A++YGFC+GV+RA++IA + + +IHNP KRLE N+ V
Sbjct: 1 MEVKMAKNYGFCFGVKRAIEIAQKNKNSL------TLGSLIHNPKEIKRLERD--YNVRV 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V + V++ G ++ L KNV I+D TCP+V K VEK
Sbjct: 53 QE---DVESVEANESVIIRTHGIPKHDLALLKEKNVHIIDATCPYVIKPQQIVEKMSAQG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S++ +V S E +K
Sbjct: 110 YQIVIFGDANHPEVKGVISYSSTPPLV--------------------VGSLAELQTQKLG 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K ++ + +QT T++ KL+E + F + + E I FNTIC
Sbjct: 150 K-------------RIALVSQT------TKQTPKLLE---IASFLIAHCAEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + Q+A+ ++ +E VD++++V IA++ SY ++ + P
Sbjct: 187 NATFDNQEAVRELSQE-VDIMVIVGGKSSSNTKQLFNIAKEFCADSYLVEDFNDLDP--- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
W G+ GI++GASTPD ++ V +K+ E
Sbjct: 243 --------------TWF-VGKTLCGISAGASTPDWIIQGVREKIEE 273
>gi|315453348|ref|YP_004073618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
felis ATCC 49179]
gi|315132400|emb|CBY83028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB
[Helicobacter felis ATCC 49179]
Length = 274
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 85/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+A++YGFC+GV+RA++IA + + +IHNP KRLE+ N+ V
Sbjct: 1 MQVKMAKNYGFCFGVKRAIEIAQKNKDSL------TLGSLIHNPKEIKRLEQDY--NVRV 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + + V++ G ++ L +K QI+D TCP+V K VEK
Sbjct: 53 QE---DVNTIEPHKKVIIRTHGIPKNDLSKLKDKGAQIIDATCPYVIKPQQIVEKMSAKG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S++ +V N S +E +K
Sbjct: 110 YQIVIFGDANHPEVKGVISYSSTPPLVVN--------------------SLEELQTQKLG 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K K+ + +QT T++ KL+E + F + E I FNTIC
Sbjct: 150 K-------------KIALVSQT------TKQTPKLLE---IASFLIARCAEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + Q+A+ ++ +E VD++++V IA++ SY ++ + P
Sbjct: 187 NATFDNQEAVRELSQE-VDIMVIVGGKTSSNTKQLFHIAKEFCSDSYLVEDFNDLNP--- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W G+ GI++GASTPD +E V ++ +I
Sbjct: 243 --------------EWF-SGKKLCGISAGASTPDWIIEKVRVQISQI 274
>gi|334336435|ref|YP_004541587.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isoptericola
variabilis 225]
gi|334106803|gb|AEG43693.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isoptericola
variabilis 225]
Length = 346
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 147/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A E + +++ EI+HN V L E +
Sbjct: 15 RVLLAAPRGYCAGVDRAV-VAVEKALETYGAPVYVRKEIVHNKHVVATLRERGAIFV--- 70
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +V A G + + +++ +D TCP V+KV + K DY
Sbjct: 71 ---NETDEVPEGARLVFSAHGVSPAVRASAAERSLDTIDATCPLVTKVHKEAVRFAKDDY 127
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ V N + E K
Sbjct: 128 DILLIGHDGHEEVEGTAGEAPDHVQVVNSPD------------------------EVDKV 163
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V DPD KV +QTT+ ET E V + E F S
Sbjct: 164 TVR---DPD----KVVWISQTTLSVDETMET-------------VRRLRERFPSLQDPPS 203
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ K+ E DL++VV A S + E + G + AY++
Sbjct: 204 DDICYATQNRQVAVKKLAPE-CDLVIVVGSANSSN--SVRL-VEVALEAGARSAYRVDRA 259
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+E+E WL G T+G+TSGAS P+ V+DV++ + E
Sbjct: 260 TEIEEE-WL-DGVTTVGVTSGASVPEILVQDVIRHLAE 295
>gi|257069424|ref|YP_003155679.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
faecium DSM 4810]
gi|256560242|gb|ACU86089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
faecium DSM 4810]
Length = 337
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 92/352 (26%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LAE G+C GV+RAV +A E + +E I++ +EI+HN V RL+E + VEE
Sbjct: 9 VLLAEPRGYCAGVDRAV-VAVERALEHYDETIYVRHEIVHNKFVVDRLKEKGA--VFVEE 65
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D + +G +V+ A G + V EM +N++ +D TCP V+KV + + D
Sbjct: 66 ----VDEIPEGSLVIFSAHGISPKVREMA--EERNLRTIDATCPLVTKVHKEAVRFARQD 119
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE TA A +++ + N + + K
Sbjct: 120 YDILLVGHEGHEEVEGTAGEAPEHVQIVNSPD------------------------DVHK 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT-- 262
V DP+ +V +QTT+ ET E V+ + E F + +
Sbjct: 156 VTVR---DPE----RVVWLSQTTLSVDETMET-------------VDKLRERFPTLQSPP 195
Query: 263 ---ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI-PSYWIDSEKR 306
IC ATQ RQ A+ K+ + DL+LVV E+A++ G S+ IDS
Sbjct: 196 SDDICYATQNRQVAIKKIAPD-ADLVLVVGSPNSSNSVRLMEVAKEAGAKASHRIDSVHE 254
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ +E W +G T+G+TSGAS PD V+ +L + E
Sbjct: 255 L-----------------QEEWF-EGVETVGVTSGASVPDVLVQQLLNVLAE 288
>gi|386750258|ref|YP_006223465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 00-7128]
gi|384556501|gb|AFI04835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 00-7128]
Length = 274
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 153/336 (45%), Gaps = 69/336 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ YGFC+GV+RA+QIA + E I +IHN RLE+ N+ +
Sbjct: 1 MEIKMAKDYGFCFGVKRAIQIAEK------NENSLIFGSLIHNAKEINRLEKNF--NVKI 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE K+ ++K V++ G +++ L +K ++I D TCP+V K VE K
Sbjct: 53 EEDPKK---ISKDKSVIIRTHGIPKQDLEYLKSKGIKITDATCPYVIKPQQIVESMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G +H E S++ + +N +E L+K
Sbjct: 110 YQIVLFGDINHPEVKGVISYSTSETLA-----------------INSLEELQEKKLQK-- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV + +QT T++ KL++ + + +E E I FNTIC
Sbjct: 151 --------------KVALVSQT------TKQTPKLLQ---IASYLIERCPEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT Q A + +E VD+++VV +++ K +Y LVE
Sbjct: 187 NATSHNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLNIAKQHC----KDSY------LVE 235
Query: 325 KENWLP----KGQITIGITSGASTPDKAVEDVLKKV 356
EN L KG+ GIT+GASTPD +E V +K+
Sbjct: 236 DENELEIEWFKGKKLCGITAGASTPDWIIEKVKQKI 271
>gi|348026190|ref|YP_004765995.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
elsdenii DSM 20460]
gi|341822244|emb|CCC73168.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
elsdenii DSM 20460]
Length = 652
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 146/345 (42%), Gaps = 91/345 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA + GFC+GV RAV++A +A E+ IIHNP V RL V PV
Sbjct: 1 MKVTLAAACGFCYGVRRAVELAGKA-----EKGTHTLGPIIHNPQVVGRLAAHGVS--PV 53
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V+KG VV++ + G + K ++++D TCP V K + +
Sbjct: 54 D----SLDEVDKGAVVLIRSHGVGPDVYDQAVQKELKVIDATCPHVKKAQQDAKNIVEKG 109
Query: 145 YTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYV--CDYILGGELNGSSSTKEAFLE 201
II G+ SH E ++ + + A + II+ +EAE + CD
Sbjct: 110 ENLIIVGEKSHPEVISISQWGANRAIIIDREEEAEKIPFCD------------------- 150
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+G+ QTT ++E K + + RK H
Sbjct: 151 -----------------SMGVVVQTTF----SQEQFKRIAAILQRK------TNHLDVHM 183
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC ATQ+RQ A ++ VD ++V+ ++ ++ P+Y I++ +
Sbjct: 184 TICTATQQRQQAAIELAGH-VDAMIVIGGKNSANTGRLAQVCREQDCPTYHIETAAELDT 242
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
W +G IGIT+GASTPD +++V+K
Sbjct: 243 A-----------------WF-RGMNHIGITAGASTPDWIIQEVVK 269
>gi|186475354|ref|YP_001856824.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phymatum STM815]
gi|184191813|gb|ACC69778.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia phymatum
STM815]
Length = 319
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 151/354 (42%), Gaps = 79/354 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K + I++ +EI+HN V + L +
Sbjct: 5 DTTLAEAEILLAQPRGFCAGVDRAIEIVERAIKLY-GSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I +Q + V G V+ A G + + + +++ D TCP V+KV V
Sbjct: 64 AIFI------EQLEEVPSGSTVIFSAHGVSKAVRAEADERGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K + + ++ G H E T + E Y+ + +++ + + A
Sbjct: 118 KMRADGFDIVMIGHKGHPEVEGT---------MGQTAEGMYLVE-----DIDDVQALQLA 163
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHF 257
DPD ++ QTT+ + + IG L K N+ E
Sbjct: 164 -------------DPD----RIAYVTQTTLSVDDAAQIIGAL-------KVKYPNIKEP- 198
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + D+++VV E+AE G+PSY +DS
Sbjct: 199 -KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPSYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ + IG+T+GAS P+ + V+ ++ E+
Sbjct: 257 QIDPA-----------------WVADKR-RIGVTAGASAPEALAQAVIGRLREL 292
>gi|414154798|ref|ZP_11411115.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453629|emb|CCO09019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 675
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 85/348 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA GFC+GV+RA+++A +A + + I+ +IHNP V + L V+ I
Sbjct: 4 IEVLLANKAGFCYGVKRAIEMALQAAR-VKKANIYTLGPLIHNPQVVQDLARQGVKEI-- 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
V +G +++ + G + K ++I+D TCP+V++ + +
Sbjct: 61 ----NDLAEVTEGSIIIR-SHGVGPQIFQQAGEKGLEIIDATCPFVARAQRAAHAMAEQG 115
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I G H E +A G ++++N +
Sbjct: 116 LPVFILGDPGHPEVQGILGWAMGMGVVIENADQLSR------------------------ 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
VD KVG+ QTT KLVE + K GVE + NTI
Sbjct: 152 -----------VDHPKVGVVAQTTQ---PLANYLKLVEA--LEKQGVE-----VDARNTI 190
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT ERQ A ++ +KVD+++VV I ++ G P+Y ++S + +
Sbjct: 191 CHATGERQRAALELA-QKVDVMVVVGGKNSANTKKLARICQETGTPTYHVESAQEL---- 245
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+E W G +G+T+GASTPD +E+V +++ ++
Sbjct: 246 -------------REEWF-YGHRILGLTAGASTPDAIIEEVKRRMKDL 279
>gi|336453533|ref|YP_004607999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CIII-1]
gi|335333560|emb|CCB80287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CIII-1]
Length = 274
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 85/346 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+A++YGFC+GV+RA++IA + + +IHNP KRLE N+ V
Sbjct: 1 MEVKMAKNYGFCFGVKRAIEIAQKNKNSL------TLGSLIHNPKEIKRLERDF--NVRV 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V + V++ G ++ L KNV I+D TCP+V K VEK
Sbjct: 53 QE---DVESVEANESVIIRTHGIPKHDLALLKEKNVHIIDATCPYVIKPQQIVEKMSAQG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S++ +V S E +K
Sbjct: 110 YQIVIFGDANHPEVKGVISYSSTPPLV--------------------VGSLAELQTQKLG 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K ++ + +QT T++ KL+E + F + + E I FNTIC
Sbjct: 150 K-------------RIALVSQT------TKQTPKLLE---IASFLIAHCAEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + Q+A+ ++ +E VD++++V IA++ SY ++ + P
Sbjct: 187 NATFDNQEAVRELSQE-VDIMVIVGGKSSSNTKQLFNIAKEFCADSYLVEDFNDLDP--- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
W G+ GI++GASTPD ++ V +K+ E
Sbjct: 243 --------------TWF-VGKTLCGISAGASTPDWIIQGVREKIEE 273
>gi|358457873|ref|ZP_09168088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
CN3]
gi|357078891|gb|EHI88335.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
CN3]
Length = 319
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 148/341 (43%), Gaps = 78/341 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ +A + + +++ +I+HN V K LE A I VE
Sbjct: 3 RVLLAKPRGYCAGVDRAVQTVEKALELY-GVPVYVRKQIVHNAHVVKTLE--AKGAIFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V G VV A G A + ++ +D TCP V+KV + + DY
Sbjct: 60 ETEE----VPHGATVVFSAHGVAPTVHEEATERKLRTIDATCPLVTKVHHEARRFAREDY 115
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V T A I +++ G + +
Sbjct: 116 DILLIGHEGHEEVVGTTGQAPDRI-------------HLVDGPEDAAGVAVR-------- 154
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
DP +V +QTT+ ET E + + G N + IC
Sbjct: 155 ------DPK----RVAYLSQTTLSVDETMETVDALRERFPHLTGPPN--------SDICY 196
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K + + VDLILV VE+A D G P +Y +D+ +++
Sbjct: 197 ATQNRQVAV-KEIAQAVDLILVVGSPNSSNSVRLVEVALDAGAPAAYLVDNSEQV----- 250
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+E WL G T+G+TSGAS P++ V +++
Sbjct: 251 ------------QEQWL-DGVETVGVTSGASVPEELVTELM 278
>gi|320538471|ref|ZP_08038336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
phagedenis F0421]
gi|320144688|gb|EFW36439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
phagedenis F0421]
Length = 291
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 73/344 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+K AE G+C GV +AV + KQ + +IHNP + L++ V+ + E
Sbjct: 7 IKRAEVLGYCMGVRKAVDAVFSVIKQG-HGNVLTYGPLIHNPATMRALQKEGVKILDPES 65
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ + G+ V++ A G + E+ L N ++VD TCP V +KH +
Sbjct: 66 FEPDSKLA--GNTVIIRAHGISPEKRAALENSGARLVDATCPRVVSSQMRAKKHAEKGLP 123
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
I+ G +H E + A + V+++K G + G +T+E A
Sbjct: 124 VILAGDKNHGELIGIAGY------VRSVK----------GAQCFGVQNTEE--------A 159
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
FD D + + QTT+ + E I ++ + + ++ + NTIC A
Sbjct: 160 ARLSFDAD----EAVLIAQTTIKQSEYNAIADVLRRKV----------KNLLVLNTICPA 205
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T+ERQ A+ K+ E VD +L++ + A+D +P++ +++ K I P
Sbjct: 206 TEERQIALKKLSLE-VDAVLIIGGKNSANTQRLLQTAKDIPLPAWLVETAKDI-PKEIYQ 263
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ ++GI++GASTPD ++ V K + E
Sbjct: 264 FR------------------SVGISAGASTPDFIIDQVEKALRE 289
>gi|189425205|ref|YP_001952382.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter lovleyi SZ]
gi|238692112|sp|B3E441.1|ISPH_GEOLS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|189421464|gb|ACD95862.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter lovleyi SZ]
Length = 280
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 155/338 (45%), Gaps = 65/338 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC+GV+RA Q+A+EA + ++K + IIH+P V +LEEM V +
Sbjct: 1 MKVILAKRAGFCFGVKRATQMAFEAAGK--DQKTFTLGPIIHSPQVVNKLEEMGVGVV-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K V+ G V++ + G EM + K +++VD TCP+V K V+ +
Sbjct: 57 ----KDLSGVSNG-TVIIRSHGVLASEMDEAHQKQLEVVDATCPFVKKAQEHVQYLSEAG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G H E S+ KE YV A ++ K
Sbjct: 112 YDVLVVGDADHPEVQGIVSYG---------KEKVYVV----------------ASGDQVK 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ G K+G+ QTT ++ + K V +R+ G V +NTIC
Sbjct: 147 QLPKMG--------KMGVVAQTT----QSFDNLKSVVTECLRRGGEVRV------YNTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
DAT RQ ++ ++ VD ++V+ A R + + + R Y +
Sbjct: 189 DATAVRQQEATELAQQ-VDCMIVIGGFNSANTRRLAEICTEIQPR-------TYHIETAA 240
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
++ +W +G T+G+T+GASTP +++V+ ++ ++
Sbjct: 241 EIDC-SWF-QGVDTVGVTAGASTPKWIIDEVMNRLDQV 276
>gi|28210997|ref|NP_781941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
tetani E88]
gi|50401023|sp|Q895G2.1|ISPH_CLOTE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|28203436|gb|AAO35878.1| conserved protein [Clostridium tetani E88]
Length = 635
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 58/339 (17%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC+GV+RAV + ++ +P++ I+ +IHN V L+ + +I G
Sbjct: 5 LAKKSGFCYGVKRAVDTCLKIKQNYPDKIIYTLGPLIHNNDVVDFLKTKNIFSI----GY 60
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ D + +GD+++L + G +E + L K + I+D TCP+VS + +K+ K Y+ +
Sbjct: 61 ENIDTLKEGDIIILRSHGVTLETIQKLKEKKLNIIDATCPYVSNIQKKAQKYYKEGYSIL 120
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
I G +H E + + I+ ++AE + D L K
Sbjct: 121 IVGDKNHPEVIGINGWCNNSAII--CRKAEEIED-----------------LPK------ 155
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
K+ + +QTT K E + V N ++FNTIC+AT+
Sbjct: 156 ----------KICVVSQTTEKK----------EHWISVLSKVVNECREVVAFNTICNATE 195
Query: 269 ERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV-EKEN 327
RQ + + +E VD ++V+ + I N +H E E +
Sbjct: 196 VRQLSAEDLSKE-VDFMIVIGSKSSSNTTKLY-----EICKNN--CSNTIHIENAGELPD 247
Query: 328 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
++ IG+T+GASTPD +++ + K+ E L+
Sbjct: 248 YISNKYSKIGVTAGASTPDWIIKEAIFKMSNKNLNEQLE 286
>gi|319943238|ref|ZP_08017521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lautropia
mirabilis ATCC 51599]
gi|319743780|gb|EFV96184.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lautropia
mirabilis ATCC 51599]
Length = 374
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 81/351 (23%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G V LA+ GFC GV+RA+ I A I++ +EI+HN V L E I
Sbjct: 42 GEEAVLLAQPRGFCAGVDRAITIVERALA-LHGAPIYVRHEIVHNDYVVSTLREKGA--I 98
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V G V+ A G + + + +Q+ D TCP V+KV V K +K
Sbjct: 99 FVDE----LDEVPDGATVIFSAHGVSRAVRAEASGRGLQVFDATCPLVTKVHVEVAKMRK 154
Query: 143 GDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ I+ G H E T A G Y++ EA +
Sbjct: 155 EGHHVIMIGHAGHPEVEGTMGQADDGIYLV------------------------ETEADV 190
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E+ + V +G V + QTT+ + + V + + R+F +NE
Sbjct: 191 EQLQ--VPEG-------VSLAYVTQTTLSVDDC----RTVIEALRRRF--PQINEP--KK 233
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + + DL+L++ E+AE G +Y I S ++
Sbjct: 234 QDICYATQNRQDAV-KFMAPQCDLVLIIGSPSSSNSNRLREVAERHGCEAYLIGSAAQLN 292
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P WL +G+ +GI++GAS P+ V++++ ++ E+
Sbjct: 293 PA-----------------WL-EGRKRVGISAGASAPEILVDELVARLREL 325
>gi|308271410|emb|CBX28018.1| hypothetical protein N47_G33420 [uncultured Desulfobacterium sp.]
Length = 573
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 151/354 (42%), Gaps = 86/354 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC GV RAV++A + + + I+ +IHNP V L E + I
Sbjct: 1 MKILVAKTAGFCMGVRRAVEMALDLPNKH-KGPIFTFGPLIHNPQVLDLLCEKGISIID- 58
Query: 85 EEGKKQFDVVNKG-DVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
D+ KG V++ A G +L N +++D TCP V KV T + KH K
Sbjct: 59 -------DIPEKGFGTVLIRAHGVPPGIKKSLKNSGFKVIDATCPRVIKVRTIIGKHAKD 111
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
YTSII G H E + +A G V ++ E E L K
Sbjct: 112 GYTSIIIGDKDHPEVIGLLGYARGNGYAVASIDELES--------------------LPK 151
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
F+KA+ + QTT E++ +LV HF ++T
Sbjct: 152 FEKAI--------------VVAQTTQNIIFYEKVKELVASKY----------PHFKLYDT 187
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC++T RQ A K + E VD I+VV E A G P+Y I++E +
Sbjct: 188 ICNSTSMRQ-AEVKELAELVDAIVVVGGHNSGNTQRLAEAAIQAGKPAYRIETESEL--- 243
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
N L + +IGIT+GASTP+ ++ V + + ++ +A
Sbjct: 244 --------------DLNLLSSAR-SIGITAGASTPNWLIKRVYRSLDDLSYNKA 282
>gi|420436900|ref|ZP_14935891.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-28]
gi|393054074|gb|EJB55005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-28]
Length = 270
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 85/343 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +EE
Sbjct: 1 MAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKIEEDP 52
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
K+ + K V++ G +++ L NK V+I D TCP+V K VE K Y +
Sbjct: 53 KK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIV 109
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G +H E S+A +V +N +E L++
Sbjct: 110 LFGDINHPEVKGVISYATNQALV-----------------VNSLEELQEKKLQR------ 146
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
KV + +QT T++ KL++ + + VE E I FNTIC+AT
Sbjct: 147 ----------KVALVSQT------TKQTPKLLQ---IASYLVERCTEVRI-FNTICNATS 186
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
Q A + +E VD+++VV IA+ SY ++ E +
Sbjct: 187 YNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQYCKDSYLVEDENEL--------- 236
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
EL W K + GIT+GASTPD +E+V +K+ I
Sbjct: 237 ----ELA----WF-KDKKLCGITAGASTPDWIIENVKQKISTI 270
>gi|339327087|ref|YP_004686780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator N-1]
gi|338167244|gb|AEI78299.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Cupriavidus necator N-1]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 87/353 (24%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ ++ +A+ GFC GV+RA++I A ++F I++ +EI+HN V L +
Sbjct: 9 DAEILMAQPRGFCAGVDRAIEIVERALERF-GAPIYVRHEIVHNAYVVADLRRKGAVFV- 66
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ D V G V+ A G + E + + + D TCP V+KV V K +
Sbjct: 67 -----RELDEVPAGATVIFSAHGVSREVRADAAARGLHVFDATCPLVTKVHVEVSKMRAE 121
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
++ G H E T M +A GG L S A L+
Sbjct: 122 GCEIVMIGHRGHPEVEGT------------MGQAS-------GGMLLVESVADVATLQV- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
DP ++ QTT+ ET EI V + F
Sbjct: 162 -------ADPS----QLAYVTQTTLSVDETREI-------------VAALKARFAQIREP 197
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ ++
Sbjct: 198 KKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAERLGVPAYMVDAPEQ 256
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ P W+ G+ IG+T+GAS P+ + ++ ++ E+
Sbjct: 257 VRP-----------------EWI-AGKRRIGLTAGASAPEALAQSIVDRLREL 291
>gi|90416605|ref|ZP_01224536.1| hydroxymethylbutenyl pyrophosphate reductase [gamma proteobacterium
HTCC2207]
gi|90331804|gb|EAS47032.1| hydroxymethylbutenyl pyrophosphate reductase [gamma proteobacterium
HTCC2207]
Length = 311
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 149/354 (42%), Gaps = 87/354 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ +KLA GFC GV+RA+ I A + F I++ +E++HN V L +
Sbjct: 1 MDIKLANPRGFCAGVDRAIDIVNRALEIF-GAPIYVRHEVVHNKFVVDDLRSRGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D + +V+ A G ++ +++++ D TCP V+KV V K
Sbjct: 58 ----DELDEIPDDVIVIFSAHGVSLAVQEEARRRSLKVFDATCPLVTKVHMEVAKFSLDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
S++ G H E T G+Y DY GG + +L + +
Sbjct: 114 MESVLIGHAGHPEVEGT---MGQY-------------DYSQGGNM---------YLVEDE 148
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
V+K DP ++ QTT+ +T + ++ + E F +
Sbjct: 149 SDVAKLEVKDPS----RLAFVTQTTLSMDDTARV-------------IDALREKFPAIEG 191
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ E DLILVV E+AE G +Y ID
Sbjct: 192 PRKDDICYATQNRQDAVKQLAIES-DLILVVGSVASSNSNRLRELAERCGCTAYLID--- 247
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
GP + A WL + + IGIT+GAS PD V DV+ ++ E+
Sbjct: 248 --GPEDIDA------------QWLKQTK-AIGITAGASAPDVLVRDVISRLVEL 286
>gi|309781504|ref|ZP_07676240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_7_47FAA]
gi|404396835|ref|ZP_10988629.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_2_56FAA]
gi|308919917|gb|EFP65578.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_7_47FAA]
gi|348616900|gb|EGY66392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_2_56FAA]
Length = 327
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 79/349 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L
Sbjct: 16 TQADAEVLLAQPRGFCAGVDRAIEIVERALELF-GAPIYVRHEIVHNAYVVGDLRNKGAV 74
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 75 FV------QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKM 128
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGK-YIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
+ + I+ G H E T A ++V+++ E + L ST+ A+
Sbjct: 129 RAQGFEIIMIGHKGHPEVEGTMGQANDGMLLVESVDEVAH---------LEVKDSTRLAY 179
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ ET+EI V R V H
Sbjct: 180 V-----------------------TQTTLSVDETQEI---VAAIKARFPAV-----HEPK 208
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 209 KQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQV 267
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W+ G+ +G+T+GAS P++ + ++ ++
Sbjct: 268 KP-----------------EWV-AGKRRVGLTAGASAPEELAQSIVDRL 298
>gi|383818413|ref|ZP_09973704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
phlei RIVM601174]
gi|383338886|gb|EID17240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
phlei RIVM601174]
Length = 318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 151/351 (43%), Gaps = 88/351 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + +
Sbjct: 9 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVETLAKAGAVFV--- 64
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G A + +N+Q++D TCP V+KV ++ + DY
Sbjct: 65 ---DETDEVPEGAIVVFSAHGVAPTVHQSARERNLQVIDATCPLVTKVHNEAKRFARDDY 121
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G S + +
Sbjct: 122 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPDSVDKVTVR---- 160
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DP+ KV +QTT+ ET E V + E F +
Sbjct: 161 ------DPN----KVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 197
Query: 261 NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRI 307
+ IC ATQ RQ A+ M E +L++V VE+A + G ++ +D I
Sbjct: 198 DDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNSVRLVEVARNAGADAAHLVDYADDI 256
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
P WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 257 DPA-----------------WL-EGVTTVGVTSGASVPEILVRGVLERLAE 289
>gi|422306179|ref|ZP_16393364.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1035(8)]
gi|408627243|gb|EKL00060.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1035(8)]
Length = 316
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+I+VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVIVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILERIKEL 287
>gi|386773234|ref|ZP_10095612.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
paraconglomeratum LC44]
Length = 334
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 74/343 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LAE G+C GV+RAV +A E + +E +++ +EI+HN V RL+E + VEE
Sbjct: 6 VLLAEPRGYCAGVDRAV-VAVERALEHYDETVYVRHEIVHNKFVVDRLKEKGA--VFVEE 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +G +V+ A G + V EM +N++ +D TCP V+KV + + D
Sbjct: 63 ----VDEVPEGALVIFSAHGISPKVREMA--EERNLRTIDATCPLVTKVHKEAVRFARQD 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE TA A +++ + +NG + +
Sbjct: 117 YDILLVGHVGHEEVEGTAGEAPEHVQI-----------------VNGPEDVDKVTVR--- 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DP+ KV +QTT+ ET E V+ + E F +
Sbjct: 157 -------DPE----KVVWLSQTTLSVDETMET-------------VDRLKERFPTLQAPP 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWID---SEKRIGPGNKIAYK 316
+ IC ATQ RQ A+ K+ + DL+LVV G P+ E + G K +++
Sbjct: 193 SDDICYATQNRQVAIKKIAPD-ADLVLVV------GSPNSSNSVRLMEVALEAGAKASHR 245
Query: 317 LMH-GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ EL +E W + ++G+TSGAS PD V+++L ++ E
Sbjct: 246 IDSVSEL--REEWFEDVE-SVGVTSGASVPDVLVQELLAELAE 285
>gi|221633148|ref|YP_002522373.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
gi|221155833|gb|ACM04960.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
Length = 327
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 143/353 (40%), Gaps = 71/353 (20%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T G ++ +AE GFCWGV RA++I A ++ P + +IIHNP V ++L V
Sbjct: 11 TVGEKEIVVAEVLGFCWGVRRALEIVRNAARERPVAAL---GDIIHNPIVVEQLTREGVL 67
Query: 81 NI--PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ PVE + D V + A GA + +++++DTTCP V+KV +
Sbjct: 68 PVTDPVEAKRHGLDRV------AITAHGAPPTRYQEASVYDLEVIDTTCPLVTKVQRLAQ 121
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K Y +++G H E +AG E C +L
Sbjct: 122 KLALQGYFLVVYGDAQHPEVRGVLGWAGT----------ERACAAKSFDDLPWDGPRGTG 171
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
++ + KV + QTT E + + ++ G V
Sbjct: 172 AMQPPPR-------------KVALIAQTTKRTDEFTAFAQALAAWVLPHGGELRV----- 213
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKR 306
NTIC T ERQ+A+ ++ VDL+LV VE++ G PS ++ +
Sbjct: 214 -VNTICQPTWERQEALARLA-RTVDLVLVIGGRKSSNSARLVEVSRSLGTPSVLVERPDQ 271
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ P + +GIT+GASTPD+ + V++++ +
Sbjct: 272 LDPALFAPVR------------------RVGITAGASTPDEVILAVIEELVRL 306
>gi|352105818|ref|ZP_08960982.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
HAL1]
gi|350598241|gb|EHA14364.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
HAL1]
Length = 326
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 149/346 (43%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA+ I A F I++ +E++HN V + L A + V
Sbjct: 10 IEIKLANPRGFCAGVDRAIDIVNRALDVF-GPPIYVRHEVVHNRFVVETLR--ARGAVFV 66
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 67 EE----LDEVPDDVIVIFSAHGVSRAVQADAERRGLKVFDATCPLVTKVHLEVLRYAKRG 122
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 123 QECILIGHEGHPEVEGTM---GRY-------------DTSHGGRI---------YLVEDE 157
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K V+K DP K+ QTT+ +T ++ + G N +
Sbjct: 158 KDVAKLEVRDPS----KIAFVTQTTLSMDDTAKVIDALRDKFSEIQGPRN--------DD 205
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ + DL+LVV E++E G P+Y ID+ ++I P
Sbjct: 206 ICYATQNRQDAVRELAAQS-DLLLVVGSPNSSNSNRLRELSERMGTPAYLIDNAEQIDP- 263
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL + IG+T+GAS P+ V+ V+ K+
Sbjct: 264 ----------------QWLENVR-RIGVTAGASAPEVLVKGVIAKL 292
>gi|255525217|ref|ZP_05392159.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
carboxidivorans P7]
gi|296188737|ref|ZP_06857124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
carboxidivorans P7]
gi|255511080|gb|EET87378.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
carboxidivorans P7]
gi|296046664|gb|EFG86111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
carboxidivorans P7]
Length = 641
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 165/351 (47%), Gaps = 69/351 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC+GV+RAV+ A +K++ +K++ +IHN V L+E + I +
Sbjct: 1 MKIVLADEAGFCFGVKRAVEEAENVQKKY-NKKVFTLGPLIHNSDVVNYLKEKNIYPIEL 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + +NK D+V++ + G + + L +K++ IVD TCP+V+ + V+++ K
Sbjct: 60 D----TINDLNKDDIVIIRSHGVPRKTIELLQSKSLNIVDATCPYVANIHKKVDEYYKLG 115
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y+ +I G +H E V + K II K+ G +L S
Sbjct: 116 YSILIVGDKNHPEVVGINGWCENKAIISKD------------GSDLKNLPS--------- 154
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K+ + +QTT E +E K V + V+N E ++FNTI
Sbjct: 155 ---------------KICVVSQTT----EKQENWKRVLSII-----VKNCKE-IVAFNTI 189
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C AT+ RQ++ K+ +KVD ++V+ + I N +H V
Sbjct: 190 CSATELRQNSAEKL-SKKVDFMVVLGGRNSSNTTKLY-----EICKNN--CSNTIH---V 238
Query: 324 EKENWLPKGQI-----TIGITSGASTPDKAVEDVLKKVFEIKR-EEALQLA 368
E +P I TIG+T+GASTP +++ + K+ E K E + QLA
Sbjct: 239 ENSGEIPDDIINSKINTIGVTAGASTPHWIIKEAISKMCEGKNLEMSEQLA 289
>gi|359395249|ref|ZP_09188302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
boliviensis LC1]
gi|357972496|gb|EHJ94941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
boliviensis LC1]
Length = 334
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 149/346 (43%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA+ I A F I++ +E++HN V + L A + V
Sbjct: 18 IQIKLANPRGFCAGVDRAIDIVNRALDVF-GPPIYVRHEVVHNRFVVETLR--ARGAVFV 74
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 75 EE----LDEVPDDVIVIFSAHGVSRAVQADAERRGLKVFDATCPLVTKVHLEVLRYAKRG 130
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 131 QECILIGHEGHPEVEGT---MGRY-------------DTSHGGHI---------YLVEDE 165
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K V+K DP K+ QTT+ +T ++ + + G N +
Sbjct: 166 KDVAKLEVNDPS----KLAFVTQTTLSMDDTAKVIDALREKFAEIQGPRN--------DD 213
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ + DL+LVV E++E G P+Y ID+ +I P
Sbjct: 214 ICYATQNRQDAVRELAAQS-DLLLVVGSPNSSNSNRLRELSERMGTPAYLIDNADQIDP- 271
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL + IG+T+GAS P+ V+ V+ K+
Sbjct: 272 ----------------QWL-ENVSRIGVTAGASAPEVLVKGVIAKL 300
>gi|384108769|ref|ZP_10009659.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Treponema sp. JC4]
gi|383869740|gb|EID85349.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Treponema sp. JC4]
Length = 280
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 62/331 (18%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK 89
A GFC+GV RAV+ A +A + + +K++ +IHN V + L+ ++ + +
Sbjct: 6 ASVLGFCFGVRRAVEYAEKALEDYSGKKVYSLGPLIHNEIVLQNLKNKGLEIL----SED 61
Query: 90 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSII 149
Q + V VV++ A G + + L +K+ I++ TCP V+ +V+K T I+
Sbjct: 62 QLEKVEAKSVVIIRAHGVSPDVTNALEDKDCVIINATCPRVNANQITVQKASSKGKTIIL 121
Query: 150 HGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
G +H E A +A GK+I+++N K+A+ A E +A+
Sbjct: 122 TGDSNHGEVKGVAGYAQGKFILLQNEKDAQ-------------------ALKEDDGEAI- 161
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
+ +QTT + E+I ++V +K+ +N NTIC AT+
Sbjct: 162 -------------LLSQTTFSPVQFEKISQIVG----QKYKNLKIN------NTICPATK 198
Query: 269 ERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 328
ERQD++ + +VD +LV+ + +EK H ++
Sbjct: 199 ERQDSLIDLCS-RVDGVLVIGGKNSANTIRLFQTAEKN----------CPHAAHIQSAEE 247
Query: 329 LPKGQIT---IGITSGASTPDKAVEDVLKKV 356
+P+ +GIT+GASTPD +E V K +
Sbjct: 248 IPQEFFAFERVGITAGASTPDVIIEQVEKAL 278
>gi|399117148|emb|CCG19962.1| recname: full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ec=1.17.1.2 [Taylorella asinigenitalis 14/45]
Length = 315
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 83/351 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ L+E GFC GV+RA+ I A + I++ +EI+HN V + L E I
Sbjct: 6 NAEILLSEPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRFVVQSLREKGA--IF 62
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+E D V +G +V+ A G +++ + +++ D TCP V+KV V+K +
Sbjct: 63 VDE----LDEVPEGSIVIFSAHGVSLKVRQEAEARGLRVFDATCPLVTKVHIEVKKMHEA 118
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G H E T A NM E V D
Sbjct: 119 GRSVIMIGHKGHPEVEGTLGQAR-----GNMYLVETVEDV-------------------- 153
Query: 204 KKAVSKGFD-PDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN- 261
D P+ D + QTT+ +T L+ K + KF + I+
Sbjct: 154 -----HNLDIPNTD--NLAYVTQTTLSVDDT----ALITKALHEKF------PNIIAPKK 196
Query: 262 -TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K++ + D+ VV E+AE PSY ID I
Sbjct: 197 ADICYATQNRQDAV-KIIAPQCDVFFVVGSTNSSNSNRLRELAERLNCPSYLIDDPDMIK 255
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W+ +G+ +IGIT+GAS P+ V++V+ ++ E+
Sbjct: 256 P-----------------EWI-EGKKSIGITAGASAPEVLVQNVINRLREM 288
>gi|423208177|ref|ZP_17194731.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER397]
gi|404619224|gb|EKB16140.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER397]
Length = 311
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 159/352 (45%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVAKLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + +HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRKHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGARAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+E+WL +G IG+T+GAS P+ V++V+ ++ E+
Sbjct: 252 -----------------EESWL-EGVKAIGVTAGASAPEVLVQNVIARLREL 285
>gi|348589909|ref|YP_004874371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
asinigenitalis MCE3]
gi|347973813|gb|AEP36348.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
asinigenitalis MCE3]
Length = 315
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 83/351 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ L+E GFC GV+RA+ I A + I++ +EI+HN V + L E I
Sbjct: 6 NAEILLSEPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRFVVQSLREKGA--IF 62
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+E D V +G +V+ A G +++ + +++ D TCP V+KV V+K +
Sbjct: 63 VDE----LDEVPEGSIVIFSAHGVSLKVRQEAEARGLRVFDATCPLVTKVHIEVKKMHEA 118
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G H E T A NM E V D
Sbjct: 119 GRSVIMIGHKGHPEVEGTLGQAR-----GNMYLVETVEDV-------------------- 153
Query: 204 KKAVSKGFD-PDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN- 261
D P+ D + QTT+ +T L+ K + KF + I+
Sbjct: 154 -----HNLDIPNTD--NLAYVTQTTLSVDDT----ALITKALHEKF------PNIIAPKK 196
Query: 262 -TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K++ + D+ VV E+AE PSY ID I
Sbjct: 197 ADICYATQNRQDAV-KIIAPQCDVFFVVGSTNSSNSNRLRELAERLNCPSYLIDDPDMIK 255
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W+ +G+ +IGIT+GAS P+ V++V+ ++ E+
Sbjct: 256 P-----------------EWI-EGKKSIGITAGASAPEVLVQNVINRLREM 288
>gi|342214801|ref|ZP_08707474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 780 str. F0422]
gi|341590624|gb|EGS33861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 780 str. F0422]
Length = 635
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 93/345 (26%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI---- 82
++LAE+ GFC+GV+RAV +A +A ++ + IIHNP V RLE+ V I
Sbjct: 4 IRLAENCGFCYGVKRAVTMAEKAADS--QDLSYTLGPIIHNPQVVGRLEDNGVYAINELS 61
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEEG +++ + G E + + ++D TCP V K +
Sbjct: 62 DVEEG-----------TIIIRSHGVGPEVYEEAETRGLPVIDATCPHVQKAQRDAKSVVD 110
Query: 143 GDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T II G+ H E + +AG K IIV+ ++A + F+E
Sbjct: 111 EGLTLIILGEKKHPEVKSINLWAGNKGIIVETEEDARNI-----------------QFVE 153
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K+G+ QTT + + + I K++E + N+ I F
Sbjct: 154 -----------------KIGVVVQTTFSQFKFQSIIKILE---------QKSNDQKI-FK 186
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC AT+ERQ++ + +E VDL++VV E+ D G +Y I++ I
Sbjct: 187 TICQATEERQNSAVALAKE-VDLMIVVGGKNSGNTTRLAEVCRDVGCTTYHIETATEI-- 243
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ WL K T+G+T+GASTPD +++V++
Sbjct: 244 ---------------QMTWL-KDVTTVGVTAGASTPDWIIKEVIQ 272
>gi|226943312|ref|YP_002798385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azotobacter
vinelandii DJ]
gi|259493941|sp|C1DPH8.1|ISPH_AZOVD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226718239|gb|ACO77410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azotobacter
vinelandii DJ]
Length = 315
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 143/344 (41%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ +KLA GFC GV+RA++I A + F I++ +E++HN V L I V
Sbjct: 1 MHIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVDDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDNVIVIFSAHGVSQAVRQEAARRGLKVFDATCPLVTKVHMEVARYSREG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E V T G+Y D GG + ++ + +
Sbjct: 114 RECILIGHQGHPEVVGT---MGQY-------------DTANGGAIYLVEDEEDVARLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
VS F QTT+ ++ ++++ R G+ + IC
Sbjct: 158 NPVSLAF-----------VTQTTL---SMDDAARMIDALRARFPGIGGPRR-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ E L+LVV E+AE G+P+Y +D + +
Sbjct: 199 YATQNRQDAVRQLAGE-CQLVLVVGSSSSSNSNRLRELAESIGVPAYLVDGAQDL----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W G +G+T+GAS P+ V DV+ ++
Sbjct: 253 ------------RREWF-DGIRRVGVTAGASAPEVLVRDVIDRL 283
>gi|238019394|ref|ZP_04599820.1| hypothetical protein VEIDISOL_01258 [Veillonella dispar ATCC 17748]
gi|237864093|gb|EEP65383.1| hypothetical protein VEIDISOL_01258 [Veillonella dispar ATCC 17748]
Length = 632
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 157/348 (45%), Gaps = 95/348 (27%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE+YGFC+GV+RAV++A EA E K + IIHNP V RLE V P+
Sbjct: 1 MEIILAENYGFCYGVKRAVEMADEAANS--EGKSYTLGPIIHNPQVVGRLESKGVS--PI 56
Query: 85 EEGKKQFDVVNKGDVVVL-----PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+E +++G +++ PA A EE K + I+D TCP V K +
Sbjct: 57 QEVAD----IDEGTMIIRSHGVGPAIYAEAEE------KGLHILDATCPHVKKAQQDAKS 106
Query: 140 HKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ T +I G+ +H E + +A + II+++ + AE K
Sbjct: 107 VIEDGMTLVILGEKNHPEVKSINLWANNRGIIIEDEESAE-----------------KLQ 149
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
+EK G+ QTT + + I +++EK +++
Sbjct: 150 IVEKM-----------------GVVVQTTFSQFKFNSIIEILEKK----------SKNLK 182
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
F TIC+ATQERQ++ + VDL++V+ E+ D G +Y I++
Sbjct: 183 IFKTICNATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTE 241
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ + W + Q T+G+T+GASTPD +++V++
Sbjct: 242 L-----------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|109947060|ref|YP_664288.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
acinonychis str. Sheeba]
gi|109714281|emb|CAJ99289.1| lytB [Helicobacter acinonychis str. Sheeba]
Length = 270
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 150/335 (44%), Gaps = 69/335 (20%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A+ YGFC+GV+RA+QIA + + I +IHN RLE+ N+ +EE
Sbjct: 1 MAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNF--NVKIEEDP 52
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
K+ + K V++ G +++ L NK V+I D TCP+V K VE K Y +
Sbjct: 53 KK---IPKDKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIV 109
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G +H E S+A +V +N +E L++
Sbjct: 110 LFGDINHPEVKGVISYATNQALV-----------------VNSLEKLQEKKLQR------ 146
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
KV + +QT T++ KL++ + + VE E I FNTIC+AT
Sbjct: 147 ----------KVALVSQT------TKQTPKLLQ---IASYLVEKCTEVRI-FNTICNATS 186
Query: 269 ERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 328
Q A + +E VD+++VV +++ K +Y LVE EN
Sbjct: 187 YNQKAALDLSKE-VDIMIVVGGKTSSNTKQLLSIAKQHC----KDSY------LVEDENE 235
Query: 329 LP----KGQITIGITSGASTPDKAVEDVLKKVFEI 359
L K + GIT+GASTPD +E+V +K+ I
Sbjct: 236 LEMAWFKDKKLCGITAGASTPDWIIENVKQKISTI 270
>gi|456064047|ref|YP_007503017.1| hydroxymethylbutenyl pyrophosphate reductase [beta proteobacterium
CB]
gi|455441344|gb|AGG34282.1| hydroxymethylbutenyl pyrophosphate reductase [beta proteobacterium
CB]
Length = 317
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 91/352 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ +A+ GFC GV+RA+ I EA +F I++ +EI+HN V L E +
Sbjct: 12 EILMAQPRGFCAGVDRAINIVNEALTRF-GAPIYVRHEIVHNAYVVNGLREKGAVFV--- 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ V KG +VV A G + E + +Q+ D TCP V+KV V K K +
Sbjct: 68 ---DELHEVPKGGIVVFSAHGVSQEVRQDAEMRGLQVYDATCPLVTKVHLEVVKMCKDGF 124
Query: 146 TSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T ++ G H E T G ++I E V D +L S K AF+
Sbjct: 125 TVLMIGHAGHPEVEGTMGQVEEGVHLI-------EKVADV---AQLPFSEHEKMAFV--- 171
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
QTT+ ET+EI V+ + + F +
Sbjct: 172 --------------------TQTTLSVDETKEI-------------VDALTQKFPNIVQP 198
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ ++
Sbjct: 199 RKQDICYATQNRQDAV-KFMAPQVEIVIVVGSKASSNSNRLRELAEKLGVPAYMVDAPEQ 257
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ + W G+ +G+T+GAS P+ +++++ E
Sbjct: 258 L-----------------QAEWF-VGKKRVGLTAGASAPESLALSIVERIQE 291
>gi|386816625|ref|ZP_10103843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiothrix nivea
DSM 5205]
gi|386421201|gb|EIJ35036.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiothrix nivea
DSM 5205]
Length = 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 145/337 (43%), Gaps = 73/337 (21%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GV+RA++I A + +++ NE++HN V L + +
Sbjct: 5 LANPRGFCAGVDRAIEIVDRALEVL-GAPVYVRNEVVHNRFVVNNLRDKGAVFV------ 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ D V V+ A G + + +++ D TCP V+KV V ++ + +I
Sbjct: 58 QELDEVPDDATVIFSAHGVSRAVQEEAKRRGLKVFDATCPLVTKVHIEVTRYSREGRETI 117
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G +H E T G+Y D LGG + S +E A
Sbjct: 118 LIGHKNHPEVEGT---MGQY-------------DTSLGGAVYRVDSPEEV-------AEL 154
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
+PD K+ QTT+ ++ +++ R + + + IC ATQ
Sbjct: 155 HVNNPD----KLAFVTQTTL---SVDDASIVIDALRARFPAIIGPKK-----DDICYATQ 202
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
RQDA+ K+ +E DLILVV EIAE RG +Y ID + I
Sbjct: 203 NRQDALKKLADES-DLILVVGSPNSSNSNRLREIAEKRGTTAYLIDGAEDI--------- 252
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
++ WL +G+ +IG+T+GAS P+ VE V+
Sbjct: 253 --------RDEWL-QGKRSIGVTAGASAPEVLVEGVI 280
>gi|83648572|ref|YP_437007.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hahella
chejuensis KCTC 2396]
gi|123530802|sp|Q2S9U2.1|ISPH_HAHCH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|83636615|gb|ABC32582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hahella
chejuensis KCTC 2396]
Length = 317
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 151/358 (42%), Gaps = 77/358 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA GFC GV+RA++I A F I++ +E++HN V + L +
Sbjct: 1 MKIKLANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNRFVVEGLRTRGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V G +V+ A G + E + + +++ D TCP V+KV V ++ +
Sbjct: 58 ----DELDEVPDGALVIFSAHGVSQEVRQEADARGLKVFDATCPLVTKVHMEVMRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DSANGGAI---------YLVEDE 148
Query: 205 KAVSKGF--DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V + DP + QTT+ +T + + +T G +
Sbjct: 149 EDVGRLIVNDPG----NLAYVTQTTLSVDDTARVIDALRQTFPEIKGPRK--------DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K + D++LVV E+AE P+Y ID I P
Sbjct: 197 ICYATQNRQDAV-KELAATCDVVLVVGSVNSSNSNRLRELAERMQTPAYLIDGAHEIQP- 254
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
+W G ++G+T+GAS P+ V+ V++++ E+ E ++A
Sbjct: 255 ----------------DWF-AGAASVGVTAGASAPEVLVQQVVQRLRELGGEAPAEIA 295
>gi|288920875|ref|ZP_06415171.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EUN1f]
gi|288347707|gb|EFC81988.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EUN1f]
Length = 319
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 143/341 (41%), Gaps = 78/341 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ +A + +++ +I+HN V K LE A I VE
Sbjct: 3 RVLLAKPRGYCAGVDRAVQTVEKALDLY-GSPVYVRKQIVHNAHVVKTLE--AKGAIFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G VV A G A +++ ++ +D TCP V+KV + + K D
Sbjct: 60 E----TDEVPVGATVVFSAHGVAPTVHEEASSRQLRTIDATCPLVTKVHSEARRFAKEDL 115
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V T A I + + E
Sbjct: 116 DILLIGHEGHEEVVGTTGQAPDRIHLVDGPE---------------------------DA 148
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
A K DP +V +QTT+ ET + + G N + IC
Sbjct: 149 AAVKVRDPK----RVAFLSQTTLSVDETMTTVNALRERFPHLQGPPN--------SDICY 196
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K + EKVDL++V VE+A D G P S+ +D +
Sbjct: 197 ATQNRQVAV-KEIAEKVDLLIVVGSPNSSNSVRLVEVALDAGAPKSFLVDDSTEV----- 250
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
E+WL G T+G+TSGAS P++ V V+
Sbjct: 251 ------------DESWL-DGVETVGVTSGASVPEELVTGVM 278
>gi|420256543|ref|ZP_14759383.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
gi|398043024|gb|EJL35967.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
Length = 319
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 77/353 (21%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K + I++ +EI+HN V + L +
Sbjct: 5 DTTLAEAEILLAQPRGFCAGVDRAIEIVERAIKLY-GSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I +Q D V G V+ A G + + + +++ D TCP V+KV V
Sbjct: 64 AIFI------EQLDEVPSGSTVIFSAHGVSKAVRAEADERGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K + + ++ G H E T + E Y+ + +++ + + A
Sbjct: 118 KMRAEGFDIVMIGHKGHPEVEGT---------MGQTAEGMYLVE-----DIDDVQALQLA 163
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
DP+ ++ QTT+ + +I + KF NV E
Sbjct: 164 -------------DPE----RIAYVTQTTLSVDDAAQI----IAALKAKF--PNVKEP-- 198
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + + D+++VV E+AE G+PSY +DS +
Sbjct: 199 KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPSYMVDSPDQ 257
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W+ + IG+T+GAS P+ + V+ ++ E+
Sbjct: 258 IDPA-----------------WVADKR-RIGVTAGASAPEALAQAVIGRLREL 292
>gi|18310067|ref|NP_562001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens str. 13]
gi|20138569|sp|P58675.1|ISPH_CLOPE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|18144746|dbj|BAB80791.1| probable lysis tolerance protein [Clostridium perfringens str. 13]
Length = 282
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE+ + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNNIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D + KGDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 A----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDKNHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++R ++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVR------ASKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+ E V+ TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 --LLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
>gi|297183893|gb|ADI20015.1| penicillin tolerance protein [uncultured gamma proteobacterium
EB000_65A11]
Length = 310
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 79/344 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
VKVKLA+ GFC GV+RA++I A ++F I++ +E++HN TV +EE+ ++ I
Sbjct: 3 VKVKLAQPRGFCAGVDRAIEIVNRAIERF-GAPIYVRHEVVHNRTV---VEELIIKGAIF 58
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+E + V +G V+ A G + + + V + D TCP V+KV + K
Sbjct: 59 VDEIAE----VPEGATVIFSAHGVSQQVRKEAEARKVLVFDATCPLVTKVHNEISVFSKR 114
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ +I+ G H E T G+Y ++ + Y++ E +
Sbjct: 115 NQEAILIGHAGHPEVEGT---MGQY------EDPNLI--YLVEDESDVD----------- 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFG-VENVNEHFISFNT 262
V + DP+ V QTT+ ++ ++++K + RKF ++ + +
Sbjct: 153 ---VLELKDPE----NVAYVTQTTL---SVDDTARVIDK-LRRKFPKIQGPRK-----DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ E D ILVV E+AE G+ +Y ID+ + I P
Sbjct: 197 ICYATQNRQDAVKQLAGE-CDRILVVGSANSSNSNRLRELAERLGVAAYLIDTAEDIEP- 254
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL G +IG+TSGAS P+ V++V++
Sbjct: 255 ----------------KWL-VGAKSIGVTSGASAPEHLVQEVVQ 281
>gi|113868985|ref|YP_727474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha H16]
gi|113527761|emb|CAJ94106.1| penicillin tolerance protein [Ralstonia eutropha H16]
Length = 308
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 87/348 (25%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A+ GFC GV+RA++I A ++F I++ +EI+HN V L +
Sbjct: 1 MAQPRGFCAGVDRAIEIVERALERF-GAPIYVRHEIVHNAYVVAGLRRKGAVFV------ 53
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ D V G V+ A G + E + + + D TCP V+KV V K + +
Sbjct: 54 RELDEVPAGATVIFSAHGVSREVRADAAARGLHVFDATCPLVTKVHVEVSKMRAEGCEIV 113
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G H E T A +++ E V D A
Sbjct: 114 MIGHRGHPEVEGTMGQASSGMLL-----VESVADV----------------------ATL 146
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN-----TI 263
+ DP ++ QTT+ ET EI V + F I
Sbjct: 147 QVTDPS----RLAYVTQTTLSVDETREI-------------VAALKARFPQIREPKKQDI 189
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++ P
Sbjct: 190 CYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAERLGVPAYMVDAPEQVRP-- 246
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ G+ IG+T+GAS P+ + +++++ E+
Sbjct: 247 ---------------EWI-AGKRRIGLTAGASAPEALAQSIVERLREL 278
>gi|77165221|ref|YP_343746.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani ATCC 19707]
gi|76883535|gb|ABA58216.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani ATCC 19707]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 55/344 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RA+ I A + + I++ +EI+HN V + L+ V I
Sbjct: 1 MKVTLAQPRGFCAGVVRAIDIVEHALEIY-GAPIYVLHEIVHNQHVVEDLQRRGV--IFT 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK-HKKG 143
E+ + G V + A G + + T ++Q++D TCP V+KV +K +++G
Sbjct: 58 ED----LASIPAGSVTIFSAHGVSTAVVETAKKNDLQVIDATCPLVTKVHLQAKKYYRQG 113
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
D II G H E T G + G+ ++ E
Sbjct: 114 DELIII-GHAGHPEVEGTR------------------------GRVKGTVYVLDSVAEVE 148
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
AV DP+ + QTT+ +T ++ ++K + G + I
Sbjct: 149 NLAVK---DPE----HIAYVTQTTLSIDDTRDVVDALKKRFPKIHGP--------GLDDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ+A+ +M +KVD++LVV S + + +G N I L+
Sbjct: 194 CYATQNRQNAVREM-SKKVDILLVVGARN-----SSNSNRLREVGEQNGITAHLIQDAKD 247
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+W Q +GIT+GASTP+ V+ VL ++ EE + L
Sbjct: 248 LDSSWF-TSQSRVGITAGASTPEILVQGVLNELRSYGVEEVMDL 290
>gi|386283599|ref|ZP_10060823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
AR]
gi|385345142|gb|EIF51854.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
AR]
Length = 283
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 154/353 (43%), Gaps = 91/353 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA SYGFC+GV+RA++IA R +IHN RL+E NI +
Sbjct: 1 MKIQLASSYGFCFGVKRAIEIAEAHRGSV------TYGPLIHNKDEINRLKEGF--NIGL 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + + + D VV+ G E+ L +++ +++D TCP+V+ V+K
Sbjct: 53 AE---RLEDIETNDAVVIRTHGIPKNELAVLKSQDHKVIDATCPYVTTPQNIVQKMSVEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
Y+ +I G H E S+A ++AF+
Sbjct: 110 YSIVIFGDKDHPEIKGVVSYA---------------------------EDPEDAFIVLEP 142
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E+ + KG KV + +QTT + E+ K+V + + V F
Sbjct: 143 EELESLPLKG--------KVAVVSQTTK---KPEDFAKIVTALLETRKEVR-------VF 184
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTIC AT E QDA ++ +K D+++V+ I E SY I++E+ +
Sbjct: 185 NTICTATFENQDAAAELA-KKADVMIVIGGKHSSNTKQLHSICERHCKDSYLIENEQEL- 242
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
+ +W G+ GI++GASTPD V++V+ K+ E+K+
Sbjct: 243 ----------------EASWF-DGKELCGISAGASTPDWIVQNVINKIQEMKK 278
>gi|150017403|ref|YP_001309657.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
beijerinckii NCIMB 8052]
gi|149903868|gb|ABR34701.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
beijerinckii NCIMB 8052]
Length = 635
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 145/334 (43%), Gaps = 67/334 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA++ GFC+GV+RAV A +K+ KI+ +IHN V K LEE + +I E
Sbjct: 3 KVILAKNSGFCFGVQRAVNEAIRIQKEH-NSKIYTLGPLIHNNDVVKYLEENNIFSIEFE 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D +NKGD +V+ + G + + TL K +++++ TCP+V+ + V+K+ K Y
Sbjct: 62 E----IDKLNKGDTIVIRSHGVSETVLDTLEQKELKVINATCPFVANIQKKVKKYSKEGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G +H E + + I+ TK+
Sbjct: 118 HIVILGDKNHPEVIGINGWCDDKAII-----------------------TKDG------- 147
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
FD + KV + +QTT EE K + ++FNTIC
Sbjct: 148 ----TFDEENMPHKVCVVSQTTEKMKNWEETLKNLSYA-----------REILAFNTICA 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT RQ + K + +K D ++V+ + +I N +H +E
Sbjct: 193 ATDVRQRSTNK-ISKKTDAMIVIGGKNSSNTTKLY-----QIAKEN--CENTIH---IEN 241
Query: 326 ENWLPKGQIT------IGITSGASTPDKAVEDVL 353
LP I IG+T+GASTPD + +VL
Sbjct: 242 AKDLPISFIKNNNINKIGVTAGASTPDWIIREVL 275
>gi|339323441|ref|YP_004682335.1| dihydroflavonol-4-reductase DfrA [Cupriavidus necator N-1]
gi|338170049|gb|AEI81103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Cupriavidus necator N-1]
Length = 337
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 149/350 (42%), Gaps = 83/350 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A + +++ +EI+HN V + L++ + +
Sbjct: 1 MQVILAQPRGFCAGVVRAIEIVDRALVKH-GAPVFVRHEIVHNKHVVEGLKDNGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G + E + + + + +D TCP V KV T ++
Sbjct: 58 ----EELDEVPTGAVTIFSAHGVSREVIADASQRQLHAIDATCPLVIKVHTQGRQYAASG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK I+V+N EAE +L+ + T A++
Sbjct: 114 RTVILIGHAGHPEVEGTMGQIPGKVILVQN--EAEV-------AQLDLPADTPVAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
QTT+ +T I + R+F + + +T
Sbjct: 162 --------------------TQTTLSVDDTRNI----IAALGRRF------SNLVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ + + D+ILV+ EI + G+PSY I + P
Sbjct: 192 DICYATQNRQSAVRDLC-KLADVILVIGATNSSNSNRLREIGTESGVPSYLIAEGSELDP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ + +GIT+GAS P++ VEDV+ + +
Sbjct: 251 A-----------------WVRNANV-VGITAGASAPEEMVEDVINALRRL 282
>gi|187929780|ref|YP_001900267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
pickettii 12J]
gi|187726670|gb|ACD27835.1| hydroxymethylbutenyl pyrophosphate reductase [Ralstonia pickettii
12J]
Length = 327
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L
Sbjct: 16 TQADAEVLLAQPRGFCAGVDRAIEIVERALELF-GAPIYVRHEIVHNAYVVGDLRNKGAV 74
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 75 FV------QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKM 128
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T A +++ E V D L ST+ A++
Sbjct: 129 RAQGFEIIMIGHKGHPEVEGTMGQANDGMLL-----VESVDDV---AHLEVKDSTRLAYV 180
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
QTT+ ET+EI V R V H
Sbjct: 181 -----------------------TQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 209
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 210 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 268
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W+ G+ +G+T+GAS P++ + ++ ++
Sbjct: 269 P-----------------EWV-AGKRRVGLTAGASAPEELAQSIVDRL 298
>gi|417823805|ref|ZP_12470397.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE48]
gi|340048434|gb|EGR09356.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE48]
Length = 316
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + ++++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKDRSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
>gi|284105820|ref|ZP_06386224.1| LytB protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830107|gb|EFC34373.1| LytB protein [Candidatus Poribacteria sp. WGA-A3]
Length = 319
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 152/341 (44%), Gaps = 79/341 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA++I + K++ I++ +EI+H+ V L + + VE
Sbjct: 3 KIYLANPRGFCAGVDRAIEIVEMSLKRY-GAPIYVRHEIVHSRHVVNSLRKRGA--VFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G +V+ A G A + +N++++D TCP V KV V + +Y
Sbjct: 60 E----LDEVPDGALVIFSAHGVAQQVWEEARRRNLKVIDATCPLVIKVHNEVNRDYNNNY 115
Query: 146 TSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E V T K+ +V ++K+ E T E ++
Sbjct: 116 ELILIGHADHPEVVGTLGQVPDKFHLVSSVKDVE----------------TLEVENQEHL 159
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V+ QTT+ +E ++VE R G++ ++ IC
Sbjct: 160 SYVT----------------QTTL---SVDECSEIVEALNRRFPGIKGPHQ-----EDIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQ+A+ K + + V+LILV+ E+AE +P+Y IDS + +
Sbjct: 196 YATQNRQNAV-KELAKFVELILVIGSPNSSNSNRLRELAERFEVPAYLIDSYQDV----- 249
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
K WL KG IG+T+GAS P+ V +V+
Sbjct: 250 ------------KLEWL-KGVEAIGVTAGASAPEILVSEVV 277
>gi|291298291|ref|YP_003509569.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
gi|290567511|gb|ADD40476.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
Length = 478
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 137/342 (40%), Gaps = 78/342 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA FC GVERA++I A ++F I++ +I+HN V RLE +
Sbjct: 8 VVLASPRSFCAGVERAIEIVELALERF-GAPIYVRKQIVHNTHVVARLEGEGAIFV---- 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D V G VV A G A ++ + ++D TCP V+KV T + + T
Sbjct: 63 --DDLDAVPDGACVVFSAHGVAPSVRAEAESRGLDVIDATCPLVAKVHTEARRFAERGDT 120
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G HEE T A +V+++ + + S T E
Sbjct: 121 ILLIGHSGHEEVEGTMGEAAGIRLVESLADVD--------------SLTVE--------- 157
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
DP KV QTT+ ET EI + + + G + IC A
Sbjct: 158 -----DPS----KVAYLTQTTLSVDETAEIIAALRRRFPKLRGPGG--------DDICYA 200
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ+A+ ++ E DL+LVV E+A G P++ I+ +I
Sbjct: 201 TSNRQEAIVEVARE-ADLVLVVGSRNSSNSRRLTEVAATAGTPAHLIEDAGQI------- 252
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ WL G IG+++GAS P VE V+ +
Sbjct: 253 ----------RTEWL-TGARVIGLSAGASAPPHLVEAVIAHL 283
>gi|225568092|ref|ZP_03777117.1| hypothetical protein CLOHYLEM_04165 [Clostridium hylemonae DSM
15053]
gi|225163045|gb|EEG75664.1| hypothetical protein CLOHYLEM_04165 [Clostridium hylemonae DSM
15053]
Length = 294
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 79/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA++ GFC+GV+RAV+ YE + EKI+ IIHN V +++M + + V
Sbjct: 10 MKIELAKTAGFCFGVKRAVETVYEQIRLHEGEKIYTYGPIIHNEEV---IKDMKLHGVEV 66
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV-EKHKKG 143
E +++ D + G V++ + G L+ K + VD TCP+V K+ V E+ +KG
Sbjct: 67 LETEEELDGLKDG-TVIIRSHGVPRSVCDRLDKKGIGYVDATCPFVKKIHNIVMEESRKG 125
Query: 144 DYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ II G +H E +AG K +V+N +EAE C KE
Sbjct: 126 AHIIII-GNSAHPEVEGIKGWAGDKVTVVQNAEEAERFC-----------IEDKEC---- 169
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
++ + +QTT + LVE + + + + I NT
Sbjct: 170 ----------------RICVVSQTTF---NYNKFKDLVEIIVKKGYDI-------IVLNT 203
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+AT+ERQ+ + + ++V+ +LV+ EI D +Y+I +
Sbjct: 204 ICNATKERQEEA-RDIADRVEAMLVIGDRRSSNTQKLFEICSDACKDTYYIQTLD----- 257
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
L +L E T+GIT+GASTP+K +E+V V
Sbjct: 258 -----DLDMNQLRSVE--------TVGITAGASTPNKIIEEVQNNV 290
>gi|153854919|ref|ZP_01996142.1| hypothetical protein DORLON_02148 [Dorea longicatena DSM 13814]
gi|149752621|gb|EDM62552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
longicatena DSM 13814]
Length = 285
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 77/343 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V+LA++ GFC+GV+RAV Y+ ++ EKI+ IIHN V K L V+ + EE
Sbjct: 3 VELAKTAGFCFGVKRAVDTVYKQIEKHQSEKIFTYGPIIHNEEVIKDLRSHGVEVLNGEE 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV-EKHKKGDY 145
K D DVVV+ + G A ++ + + VD TCP+V K+ V E+ KG Y
Sbjct: 63 ELKTVD----ADVVVIRSHGVAKYIYDIMDERGITCVDATCPFVKKIHKIVAEESAKGSY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
II G H E +AG+ + V E E+F+
Sbjct: 119 IVII-GNGEHPEVEGIRGWAGEQVTVIQTPED----------------------AERFEL 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
P+ + KV I QTT + +E+ +++ K +++ + + NTIC+
Sbjct: 156 -------PEKEQ-KVCIVAQTTFNYNKFKELVEIISK---KRYDI-------VVLNTICN 197
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
AT+ERQ + + +VD ++V+ EI ++ + +Y+I + +
Sbjct: 198 ATKERQTEA-RQIAARVDAMVVIGDKRSSNTQKLFEICKEECLNTYYIQTLDDLDI---- 252
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
N L + ++GIT+GASTP+K +E+V V
Sbjct: 253 -------------NQLRSVE-SVGITAGASTPNKIIEEVQNNV 281
>gi|116696105|ref|YP_841681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha H16]
gi|113530604|emb|CAJ96951.1| drug tolerance protein [Ralstonia eutropha H16]
Length = 337
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 149/350 (42%), Gaps = 83/350 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A + +++ +EI+HN V + L++ + +
Sbjct: 1 MQVILAQPRGFCAGVVRAIEIVDRALVKH-GAPVFVRHEIVHNKHVVEGLKDKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G + E + + + + +D TCP V KV T ++
Sbjct: 58 ----EELDEVPTGAVTIFSAHGVSREVIADASQRQLHAIDATCPLVIKVHTQGRQYAASG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK I+V+N EAE +L+ + T A++
Sbjct: 114 RTVILIGHAGHPEVEGTMGQIPGKVILVQN--EAEV-------AQLDLPADTPVAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
QTT+ +T I + R+F + + +T
Sbjct: 162 --------------------TQTTLSVDDTRNI----IAALGRRF------SNLVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ + + D+ILV+ EI + G+PSY I + P
Sbjct: 192 DICYATQNRQSAVRDLC-KLADVILVIGATNSSNSNRLREIGTESGVPSYLIAEGAELDP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ + +GIT+GAS P++ VEDV+ + +
Sbjct: 251 A-----------------WVRDANV-VGITAGASAPEEMVEDVINALRRL 282
>gi|377820000|ref|YP_004976371.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
gi|357934835|gb|AET88394.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
Length = 319
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 79/349 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+V++ LA+ GFC GV+RA++I A K F I++ +EI+HN V L E I
Sbjct: 10 DVEILLAQPRGFCAGVDRAIEIVERAIKLF-GAPIYVRHEIVHNAYVVADLREKGAIFI- 67
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ V +G ++ A G + + +++ D TCP V+KV V K ++
Sbjct: 68 -----EELSDVPEGATLIFSAHGVSKAVRGEAEARGLRVFDATCPLVTKVHIEVAKMRQD 122
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ ++ G H E T +G + M E + D +L +L
Sbjct: 123 GFDIVMIGHKGHPEVEGTMGQSG-----EGMHLVEDIED-VLKLDLP------------- 163
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
DP ++ QTT+ + + IG L K ++ E
Sbjct: 164 --------DPQ----RIAYVTQTTLSVDDASAIIGALKNK-------YPDIKEP--KKQD 202
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K + + D+++VV E+AE RGIP+Y +DS +I P
Sbjct: 203 ICYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNSSRLREVAEKRGIPAYMVDSPTQIDP- 260
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 261 ----------------KWV-EGKKRIGVTAGASAPEVLAQAVIARLREL 292
>gi|237747754|ref|ZP_04578234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes OXCC13]
gi|229379116|gb|EEO29207.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes OXCC13]
Length = 306
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 150/343 (43%), Gaps = 81/343 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA+ GFC GV+RA++ A + F + +++ +EI+HN V RL+EM I +
Sbjct: 1 MQLILAQPRGFCAGVKRAIETVERALELF-GKPVYVRHEIVHNTHVVNRLKEMGA--IFI 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G V++ A G + + +++ D TCP V+KV V K++K
Sbjct: 58 EE----LDEVPSGSVLIFSAHGVSQAIRKDAGTRQLKLFDATCPLVTKVHVEVAKNRKNG 113
Query: 145 YTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
I+ G H E T A G Y++ +G S ++ L+
Sbjct: 114 REIIVIGHKGHPEVEGTMGQADTGMYLV-------------------DGYSDIEQLKLD- 153
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+PD + +QTT+ +T EI + K R + +
Sbjct: 154 ---------NPDA----LAYVSQTTLSVDDTAEI---IHKLKTRFPSIVEPKQ-----AD 192
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC AT RQ+A+ K + EK LI+VV EIAE G +Y +D+ +I
Sbjct: 193 ICYATTNRQEAV-KRLAEKASLIIVVGSRNSSNSNRLREIAEKNGAKAYMVDNAGQIDMA 251
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G IGIT+GAS P+ V++V+
Sbjct: 252 -----------------WL-EGHNCIGITAGASAPEILVQEVV 276
>gi|254434693|ref|ZP_05048201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani AFC27]
gi|207091026|gb|EDZ68297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani AFC27]
Length = 363
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 55/344 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RA+ I A + + I++ +EI+HN V + L+ V I
Sbjct: 44 MKVTLAQPRGFCAGVVRAIDIVEHALEIY-GAPIYVLHEIVHNQHVVEDLQRRGV--IFT 100
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK-HKKG 143
E+ + G V + A G + + T ++Q++D TCP V+KV +K +++G
Sbjct: 101 ED----LASIPAGSVTIFSAHGVSTAVVETAKKNDLQVIDATCPLVTKVHLQAKKYYRQG 156
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
D II G H E T G + G+ ++ E
Sbjct: 157 DELIII-GHAGHPEVEGTR------------------------GRVKGTVYVLDSVAEVE 191
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
AV DP+ + QTT+ +T ++ ++K + G + I
Sbjct: 192 NLAVK---DPE----HIAYVTQTTLSIDDTRDVVDALKKRFPKIHGP--------GLDDI 236
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ+A+ +M +KVD++LVV S + + +G N I L+
Sbjct: 237 CYATQNRQNAVREM-SKKVDILLVVGARN-----SSNSNRLREVGEQNGITAHLIQDAKD 290
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+W Q +GIT+GASTP+ V+ VL ++ EE + L
Sbjct: 291 LDSSWF-TSQSRVGITAGASTPEILVQGVLNELRSYGVEEVMDL 333
>gi|262191826|ref|ZP_06049997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CT 5369-93]
gi|262032313|gb|EEY50880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CT 5369-93]
Length = 316
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
>gi|170725655|ref|YP_001759681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shewanella
woodyi ATCC 51908]
gi|169811002|gb|ACA85586.1| hydroxymethylbutenyl pyrophosphate reductase [Shewanella woodyi
ATCC 51908]
Length = 315
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 84/353 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N+++KLA GFC GV+RA+ I A + FP I++ +E++HN V + L++ +
Sbjct: 6 NLQIKLANPRGFCAGVDRAISIVERALELFPA-PIYVRHEVVHNRYVVQNLKDRGA--VF 62
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE D V +V+ A G + ++ +++ D TCP V+KV V + +
Sbjct: 63 VEE----LDQVPDNSIVIFSAHGVSQAVRKEAKHRGLKVFDATCPLVTKVHLQVTRASRK 118
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T G+Y D GG L S LE
Sbjct: 119 GIECILIGHAGHPEVEGT---MGQY-------------DNPEGGVLLVESPADVESLEV- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
DP+ + QTT+ +T ++ +E + F S
Sbjct: 162 -------KDPN----NLCFVTQTTLSMDDTADV-------------IEALQSRFPSIQGP 197
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ + V + VDL +VV E+A+ RG SY +D+
Sbjct: 198 RKDDICYATQNRQDAV-RNVADDVDLFIVVGSKNSSNSNRLRELAQKRGTQSYLVDNSDD 256
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I +W +G + +T+GAS P+ V+ V+ + ++
Sbjct: 257 I-----------------DSSWF-EGVTKVAVTAGASAPEVLVQQVIDAIAQL 291
>gi|290968708|ref|ZP_06560246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
genomosp. type_1 str. 28L]
gi|335049631|ref|ZP_08542618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 199-6]
gi|290781361|gb|EFD93951.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
genomosp. type_1 str. 28L]
gi|333762366|gb|EGL39864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 199-6]
Length = 635
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 89/344 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-P 83
+KV++A + GFC+GV RAV +A +A E IIHNP V +E +A Q + P
Sbjct: 1 MKVEVAGACGFCYGVRRAVDMACQAT-----EGTRTLGPIIHNPQV---VETLATQGVAP 52
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+ ++ V+ G V++ + G + K+V+IVD TCP V K +K
Sbjct: 53 VQSLQE----VDNGSTVLIRSHGVGPQVYEEAKEKHVKIVDATCPHVKKAQQDAKKIVFA 108
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ +I G+ SH E ++ + + + II+ +EA+ + F E
Sbjct: 109 EKKLVIIGEKSHPEVISISQWGVNRAIIIDKEEEAQEI-----------------PFCED 151
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
G+ QTT + + + I ++++ H + T
Sbjct: 152 M-----------------GVVVQTTFSQEKFKRIVRILQTK----------TNHLETHMT 184
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ+RQ+A + +VD ++VV ++ ++ P+Y +++ + I P
Sbjct: 185 ICTATQQRQEAAIALA-RRVDAMIVVGGKNSANTGRLAQVCREQDCPTYHVETAREINP- 242
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+W G IGIT+GASTPD +++V+K
Sbjct: 243 ----------------SWF-HGMSYIGITAGASTPDWIIQEVVK 269
>gi|110799385|ref|YP_695787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens ATCC 13124]
gi|168214962|ref|ZP_02640587.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens CPE str. F4969]
gi|170764024|ref|ZP_02900192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens B str. ATCC 3626]
gi|422345789|ref|ZP_16426703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens WAL-14572]
gi|422873985|ref|ZP_16920470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens F262]
gi|122958919|sp|Q0TRF3.1|ISPH_CLOP1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110674032|gb|ABG83019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens ATCC 13124]
gi|170710009|gb|EDT22191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens B str. ATCC 3626]
gi|170713589|gb|EDT25771.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens CPE str. F4969]
gi|373227454|gb|EHP49768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens WAL-14572]
gi|380304980|gb|EIA17263.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens F262]
Length = 282
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE+ + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D + KGDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 A----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDENHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++R ++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVR------ASKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+ E V+ TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 --LLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
>gi|451820111|ref|YP_007456312.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451786090|gb|AGF57058.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 634
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 83/340 (24%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA + GFC+GV+RAV A +K++ +KI+ +IHN V K LE + +I EE
Sbjct: 4 VLLARNAGFCFGVQRAVDEALRIQKEY-NKKIYTLGPLIHNNDVVKFLENNNIYSIEFEE 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVT--LNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D ++ GDV+V+ + G V EM+ L NK +++ TCP+V+ + V+K+ K
Sbjct: 63 ----VDKLSVGDVIVVRSHG--VSEMILDYLENKQFTVINATCPFVTNIQKKVKKYSKEG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E + + I+ TK+ F+
Sbjct: 117 YHIVILGDKNHPEVIGINGWCNNKAII-----------------------TKDG---TFE 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ + + KV + +QTT E K E T++ V + ++FNTIC
Sbjct: 151 EQIPQ---------KVCLVSQTT-------EKMKNWENTLVNLSRV----KELLAFNTIC 190
Query: 265 DATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIPSYWIDSEKRIGPGNKI 313
AT+ RQ + ++ +E +I++ +IA+D I + I++ K +
Sbjct: 191 SATEVRQKSTNQISKEADAMIVIGGKNSSNTTKLYQIAKDNCINTIHIENFKEL------ 244
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
++++ K IG+T+GASTPD + +VL
Sbjct: 245 -----------PKDFINKNIKKIGVTAGASTPDWIIREVL 273
>gi|170693584|ref|ZP_02884742.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
gi|170141366|gb|EDT09536.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
Length = 319
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 81/355 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T AG+ + +V+++++ + +
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIEDVQAL----------------- 160
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEH 256
+ DP+ ++ QTT+ + E IG L K ++ E
Sbjct: 161 -----------QLADPE----RIAFVTQTTLSVDDAAEIIGAL-------KAKYPSIREP 198
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS
Sbjct: 199 --KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSP 255
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 256 DQIDP-----------------TWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|424776413|ref|ZP_18203394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes sp.
HPC1271]
gi|422888233|gb|EKU30622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes sp.
HPC1271]
Length = 323
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 149/355 (41%), Gaps = 91/355 (25%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N +V LA+ GFC GV+RA+ I A + I++ +EI+HN V + L I
Sbjct: 9 NAEVVLAQPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRYVVEDLRNKGAIFI- 66
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
K+ D G +V+ A G + + + +++ D TCP V+KV V + +
Sbjct: 67 -----KELDEAPSGAIVIFSAHGVSRQVRDDAEKRGLKVFDATCPLVTKVHIEVSRMRAE 121
Query: 144 DYTSIIHGKYSHEETVATASFA--GKYII-----VKNMKEAEYVCDYILGGELNGSSSTK 196
I+ G H E T A G Y++ V N+K A
Sbjct: 122 GREIIMIGHVGHPEVEGTLGQADGGMYLVETPEDVANLKVA------------------- 162
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
DPD K+ QTT+ + + +V + + +F N+ E
Sbjct: 163 ---------------DPD----KLAFVTQTTL----SVDDAAVVAQALRERF--PNIVEP 197
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
S IC ATQ RQDA+ K++ + DL+LVV E+AE +G +Y +D
Sbjct: 198 KKS--DICYATQNRQDAV-KIMAPQCDLVLVVGSTNSSNSNRLREVAERKGAEAYLLDKP 254
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ I P WL G+ +G+T+GAS P+ V V++++ E+
Sbjct: 255 EMIDPA-----------------WL-VGKKRVGVTAGASAPEVLVNQVIQRLQEL 291
>gi|397661521|ref|YP_006502221.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis ATCC 35865]
gi|394349700|gb|AFN35614.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis ATCC 35865]
Length = 315
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 79/349 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ ++ L+E GFC GV+RA+ I A + I++ +EI+HN V + L A I
Sbjct: 6 HAEILLSEPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRFVVQSLR--AKGAIF 62
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+E D V +G +V+ A G ++ + +++ D TCP V+KV V+K +
Sbjct: 63 VDE----LDEVPEGSIVIFSAHGVSLNVRRDAEARGLRVFDATCPLVTKVHIEVKKMHEA 118
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ I+ G H E T A G +V+ +++ + +
Sbjct: 119 GRSIIMIGHKGHPEVEGTLGQARGNMYLVETVEDVQNL---------------------- 156
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ DPD + QTT+ +T L+ K + KF N
Sbjct: 157 ------EVPDPD----NLAYVTQTTLSVDDT----ALITKALHDKFP----NIVAPKKAD 198
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K++ + D+ VV E+AE PSY ID+ I P
Sbjct: 199 ICYATQNRQDAV-KIIAPQCDVFFVVGSVNSSNSNRLRELAERLKCPSYLIDNPDMINPA 257
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ +IGIT+GAS P+ V++V+ ++ E+
Sbjct: 258 -----------------WI-EGKSSIGITAGASAPEVLVQNVINRLREL 288
>gi|222475281|ref|YP_002563697.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
marginale str. Florida]
gi|254806893|sp|B9KIX9.1|ISPH_ANAMF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|222419418|gb|ACM49441.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (lytB)
[Anaplasma marginale str. Florida]
Length = 342
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 154/362 (42%), Gaps = 82/362 (22%)
Query: 9 IIKKLKENGF---EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEI 64
++ + + GF + GNV+V LA GFC GVERAV+ ++ + ++ +EI
Sbjct: 17 VMLRSRSGGFFRRGFMLGNVEVILARPRGFCAGVERAVRTLESVASRYAGTREVYALHEI 76
Query: 65 IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 124
+HN V ++M V+ + V +G V+V A G + + K + +VD
Sbjct: 77 VHNLHVVNSFKKMGVKFVSA------LHEVPEGAVLVFSAHGVSQQIKEESRRKGLTVVD 130
Query: 125 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDY 183
TCP V+KV ++++ K Y I+ G H E + + ++V+N+++ +
Sbjct: 131 ATCPLVTKVHLEIQRYDKSGYQVILVGHKGHREVEGSMGQVSNPVVLVQNVQDVQ----- 185
Query: 184 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 243
+ S+ K A++ QTT+ +T EI ++
Sbjct: 186 ----SIKTPSAAKLAYV-----------------------TQTTLSMDDTAEIINALKLR 218
Query: 244 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIA 291
+ G + IC ATQ RQ A+ K + + VD++L + ++A
Sbjct: 219 FPQIVGPD--------LRDICYATQNRQTAV-KAMSQMVDVVLAIGSKNSSNSNRLLDLA 269
Query: 292 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 351
+ + +Y IDS + I WL G IGIT+GAS P+ V++
Sbjct: 270 KAQNARAYLIDSYRNI-----------------DLEWLI-GARRIGITAGASAPEILVQE 311
Query: 352 VL 353
V+
Sbjct: 312 VI 313
>gi|384423932|ref|YP_005633290.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
LMA3984-4]
gi|327483485|gb|AEA77892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
LMA3984-4]
Length = 316
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQVKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILERIKEL 287
>gi|359785565|ref|ZP_09288714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
GFAJ-1]
gi|359297120|gb|EHK61359.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
GFAJ-1]
Length = 326
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 85/361 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA+ I A F I++ +E++HN V + L E + V
Sbjct: 10 IQIKLANPRGFCAGVDRAIDIVNRALDVF-GPPIYVRHEVVHNRFVVETLRERGA--VFV 66
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 67 EELHEVPDDV----IVIFSAHGVSRAVQQEAEQRGLKVFDATCPLVTKVHLEVLRYAKRG 122
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG++ +L + +
Sbjct: 123 QECILIGHEGHPEVEGT---MGRY-------------DTSHGGQI---------YLVEDE 157
Query: 205 KAVSK-GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
+ V+K G + D + QTT+ +T ++ ++ + E F
Sbjct: 158 QDVAKLGVN---DPSTLAFVTQTTLSMDDTAKV-------------IDALREKFPEIQGP 201
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ + DL+LVV E++E G P+Y ID+ +
Sbjct: 202 RKDDICYATQNRQDAVRELAADS-DLVLVVGSPNSSNSNRLRELSERMGTPAYLIDNADQ 260
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
I P WL +G IG+T+GAS P+ V+ V+ K+ + E ++
Sbjct: 261 IEPA-----------------WL-EGVSRIGVTAGASAPEVLVKGVIDKLQTLGAEVPVE 302
Query: 367 L 367
L
Sbjct: 303 L 303
>gi|410693886|ref|YP_003624507.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiomonas sp.
3As]
gi|294340310|emb|CAZ88691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiomonas sp.
3As]
Length = 328
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 144/350 (41%), Gaps = 78/350 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E + +V LA GFC GV+RA+ I A ++F I++ +EI+HN V L+ A
Sbjct: 13 EVSASEPQVLLASPRGFCAGVDRAIDIVERALERF-GAPIYVRHEIVHNTYVVNDLK--A 69
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ VEE + V KG VV A G + +Q+ D TCP V+KV V
Sbjct: 70 KGAVFVEE----LEQVPKGGTVVFSAHGVSQAVRAQAQTLGLQVFDATCPLVTKVHVEVA 125
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K ++ ++ G H E T A +V+ + + LN + A
Sbjct: 126 KMRRDGLEIVMIGHAGHPEVEGTMGQAEGIHLVQTLDDV---------ARLNIAPDAPLA 176
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
F+ QTT+ + EI V R V H
Sbjct: 177 FV-----------------------TQTTLSVDDASEI---VAALRARYPQV-----HEP 205
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ KM+ +VD+++VV E+A+ G P+Y +D +
Sbjct: 206 KKQDICYATQNRQDAV-KMLAPQVDVVIVVGSPTSSNSNRLREVAQRMGKPAYMVDQVED 264
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + WL +G IG+T+GAS P+ V+ V+ ++
Sbjct: 265 L-----------------RAEWL-EGARQIGLTAGASAPEALVDQVVARL 296
>gi|419835605|ref|ZP_14359050.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46B1]
gi|421342023|ref|ZP_15792430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43B1]
gi|421353492|ref|ZP_15803825.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-45]
gi|422909200|ref|ZP_16943852.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-09]
gi|423733967|ref|ZP_17707183.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41B1]
gi|424008252|ref|ZP_17751202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-44C1]
gi|424658553|ref|ZP_18095810.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-16]
gi|341635790|gb|EGS60496.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-09]
gi|395945526|gb|EJH56191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43B1]
gi|395954839|gb|EJH65448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-45]
gi|408055037|gb|EKG89991.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-16]
gi|408631737|gb|EKL04265.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41B1]
gi|408859018|gb|EKL98688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46B1]
gi|408866122|gb|EKM05511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-44C1]
Length = 316
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 255 P-----------------EWFVAAQL-IGVTAGASAPEELVNQILERIKEL 287
>gi|170782740|ref|YP_001711074.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clavibacter
michiganensis subsp. sepedonicus]
gi|169157310|emb|CAQ02497.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clavibacter
michiganensis subsp. sepedonicus]
Length = 353
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 153/342 (44%), Gaps = 55/342 (16%)
Query: 12 KLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVN 71
+LK+N G KV LA G+C GV+RAV +A +++ +++ +I+HN V
Sbjct: 19 RLKDNPV---AGPKKVLLAAPRGYCAGVDRAVVAVEKALERY-GAPVYVRKQIVHNVHVV 74
Query: 72 KRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVS 131
LE M I VEE D V +G VV A G + + ++ +Q +D TCP V+
Sbjct: 75 STLERMGA--IFVEE----VDEVPEGAHVVFSAHGVSPAVVQGAADRGLQAIDATCPLVT 128
Query: 132 KVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNG 191
KV + K D ++ G HEE TA A + IV N E V +
Sbjct: 129 KVHREAVRFAKADMQILLIGHEGHEEVEGTAGEAPEQTIVVNSPEHADVIEV-------- 180
Query: 192 SSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE 251
DPD +LV + +QTT+ ET E +R+
Sbjct: 181 -------------------KDPD-NLVWL---SQTTLSVDETME--------TVRRLRAR 209
Query: 252 NVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN 311
N + IC ATQ RQ A+ K+ VD LV+ I S + E + G
Sbjct: 210 FPNLQDPPSDDICYATQNRQVAIKKV---AVDADLVIVIGSANSSNSVRL-VEVALEYGA 265
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
K +Y++ + V++E WL G T+G+TSGAS P+ V+++L
Sbjct: 266 KASYRVDYASEVKQE-WL-DGVNTVGVTSGASVPEVLVQELL 305
>gi|153215128|ref|ZP_01949835.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae 1587]
gi|124114919|gb|EAY33739.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae 1587]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 259 P-----------------EWFVAAQL-IGVTAGASAPEELVNQILERIKEL 291
>gi|319779282|ref|YP_004130195.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis MCE9]
gi|317109306|gb|ADU92052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis MCE9]
gi|399114552|emb|CCG17346.1| recname: full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ec=1.17.1.2 [Taylorella equigenitalis 14/56]
Length = 315
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 79/349 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ ++ L+E GFC GV+RA+ I A + I++ +EI+HN V + L A I
Sbjct: 6 HAEILLSEPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRFVVQSLR--AKGAIF 62
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
V+E D V +G +V+ A G ++ + +++ D TCP V+KV V+K +
Sbjct: 63 VDE----LDEVPEGSIVIFSAHGVSLNVRREAEARGLRVFDATCPLVTKVHIEVKKMHEA 118
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ I+ G H E T A G +V+ +++ + +
Sbjct: 119 GRSIIMIGHKGHPEVEGTLGQARGNMYLVETVEDVQNL---------------------- 156
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ DPD + QTT+ +T L+ K + KF N
Sbjct: 157 ------EVPDPD----NLAYVTQTTLSVDDT----ALITKALHDKFP----NIVAPKKAD 198
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K++ + D+ VV E+AE PSY ID+ I P
Sbjct: 199 ICYATQNRQDAV-KIIAPQCDVFFVVGSVNSSNSNRLRELAERLKCPSYLIDNPDMINPA 257
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ +IGIT+GAS P+ V++V+ ++ E+
Sbjct: 258 -----------------WI-EGKSSIGITAGASAPEVLVQNVINRLREL 288
>gi|229512424|ref|ZP_04401898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TMA 21]
gi|229350574|gb|EEO15520.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TMA 21]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 78/350 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y S + +EK +
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY----------------------ASDTGGMYLVEKPE 152
Query: 205 KAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
VS K DP + +QTT+ ET ++ + + + G +
Sbjct: 153 DVVSLQVKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK--------D 200
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I P
Sbjct: 201 DICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDIDP 259
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 260 -----------------EWFVDAQL-IGVTAGASAPEELVNQILERIKEL 291
>gi|413963427|ref|ZP_11402654.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
gi|413929259|gb|EKS68547.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 77/348 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+V++ LA+ GFC GV+RA++I A K F I++ +EI+HN V L + I
Sbjct: 11 DVEILLAQPRGFCAGVDRAIEIVERAIKLF-GAPIYVRHEIVHNAYVVADLRKKGAIFI- 68
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ V +G ++ A G + + +++ D TCP V+KV V K ++
Sbjct: 69 -----EELSDVPEGATLIFSAHGVSKAVRSEAEARGLRVFDATCPLVTKVHIEVAKMRQE 123
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ ++ G H E T +G + M E + D +L +L
Sbjct: 124 GFDIVMIGHKGHPEVEGTMGQSG-----EGMHLVEDI-DDVLKLDLP------------- 164
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DP ++ QTT+ ++ +++ + ++ + I
Sbjct: 165 --------DPQ----RIAYVTQTTL---SVDDASAIIDALKSKYPEIKEPKKQ-----DI 204
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + + D+++VV E+AE RGIPSY +DS +I P
Sbjct: 205 CYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNSSRLREVAEKRGIPSYMVDSPTQIDP-- 261
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 262 ---------------RWV-EGKKRIGVTAGASAPEVLAQAVIARLREL 293
>gi|451336277|ref|ZP_21906835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
gi|449421061|gb|EMD26504.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
Length = 422
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 95/351 (27%)
Query: 27 VKLAESYGFCWGVERAVQIAYEA--RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V LA FC GVERA+++ A R+ P +++ +I+HN TV LE++ +
Sbjct: 117 VCLAAPRSFCAGVERAIEVVERALERRGTP---LYVRKQIVHNATVIADLEQLGAVFV-- 171
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH-KKG 143
+ D V G VV A G A + + ++D TCP V+KV + ++G
Sbjct: 172 ----DELDEVPDGATVVFSAHGVAPAVWSEAAARGLDVIDATCPLVAKVHAEARRFVRRG 227
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D T ++ G HEE T A G+ ++V+N+ E G L+ T+ ++L
Sbjct: 228 D-TVVLIGHGGHEEVDGTLGEAPGEILLVENVAEV---------GTLDVPDPTRVSYL-- 275
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
QTT+ ET E+ V+ + + F +
Sbjct: 276 ---------------------TQTTLAADETAEV-------------VDALRQRFPALAG 301
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEK 305
+ IC A+ RQDA+ + + VDL+LV VE+AE G P++ ID
Sbjct: 302 PPSDDICYASTNRQDALRGLARD-VDLVLVVGSPNSSNSLRLVELAEAAGTPAHLIDDAT 360
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I EL WL +G+T+GAS P V+ V+ +
Sbjct: 361 DI-------------EL----GWLADAG-RVGLTAGASAPPHLVDGVVDAL 393
>gi|237751299|ref|ZP_04581779.1| penicillin tolerance protein [Helicobacter bilis ATCC 43879]
gi|229372665|gb|EEO23056.1| penicillin tolerance protein [Helicobacter bilis ATCC 43879]
Length = 280
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 155/349 (44%), Gaps = 87/349 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ YGFC+GV+RA++I + + P +IHNP RLE +N V
Sbjct: 1 MEVILADKYGFCFGVKRAIKITEKIAQNNPNT--LTLGPLIHNPLEISRLE----KNFGV 54
Query: 85 EEGKKQFDVVNKGDV--VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
K Q D+ GD V++ G + + L K V I D TCP+V+K VEK
Sbjct: 55 ---KVQEDITKLGDSKSVIIRTHGITKQNLEILQTKGVSITDATCPFVTKPQQIVEKMSN 111
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y +I G +H E + S++ K IV + E+ L++
Sbjct: 112 DGYNIVIFGDSNHPEVRSVMSYSVKTPIVVSDLES----------------------LQQ 149
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
KK KV + +QTT + E+ ++V+ + + N E + FNT
Sbjct: 150 IKKIPK----------KVAVVSQTT---KQIEQFLQIVQ------YLISNAMEVRV-FNT 189
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+AT E Q+A + + +K D++++V IA++ SY ++ E I
Sbjct: 190 ICNATFENQEAT-RTLSQKADIMIIVGGKTSSNTKQLFYIAQNHCKDSYLVEDENDI--- 245
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD---KAVEDVLKKV 356
K+ W G+ GI++GASTP+ K VE+ +K +
Sbjct: 246 --------------KQEWFV-GKKICGISAGASTPNWVIKNVENAIKSL 279
>gi|336176874|ref|YP_004582249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia
symbiont of Datisca glomerata]
gi|334857854|gb|AEH08328.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia
symbiont of Datisca glomerata]
Length = 322
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 151/342 (44%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA G+C GV+RAVQ +A + + +++ +I+HN V K LE A I VE
Sbjct: 3 RILLANPRGYCAGVDRAVQTVEKALELY-GAPVYVRKQIVHNAHVVKTLE--AKGAIFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V G VV A G A ++ ++ +D TCP V+KV + K D+
Sbjct: 60 ETYE----VPTGATVVFSAHGVAPTVHEEARSRELRTIDATCPLVTKVHGEARRFAKEDF 115
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE + T A I +V ++AE V + +
Sbjct: 116 DILLIGHEGHEEVIGTTGQAPDRIHLVDGAEDAEAV---------------------RVR 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D KV +QTT+ ETE + + + G + + IC
Sbjct: 155 -----------DESKVAYLSQTTLSVDETEVTVRALRERFPLLQGPPSAD--------IC 195
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGN 311
ATQ RQ A+ K + +V+LILV VE+A D G+P ++ +D+ +++ P
Sbjct: 196 YATQNRQVAV-KEIASQVELILVVGSPNSSNSVRLVEVALDHGVPAAHLVDNAEQVDPA- 253
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G TIG+TSGAS P++ V +V+
Sbjct: 254 ----------------WL-EGVETIGVTSGASVPEELVTEVV 278
>gi|153826772|ref|ZP_01979439.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-2]
gi|229530491|ref|ZP_04419879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
12129(1)]
gi|149739423|gb|EDM53663.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-2]
gi|229332264|gb|EEN97752.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
12129(1)]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 259 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILERIKEL 291
>gi|300690693|ref|YP_003751688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum PSI07]
gi|299077753|emb|CBJ50391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum PSI07]
Length = 324
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L
Sbjct: 13 TEADAEVLLAQPRGFCAGVDRAIEIVERALQLF-GAPIYVRHEIVHNAYVVSDLRSKGAV 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 72 FV------QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKM 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T A +++ ++ + V ++
Sbjct: 126 RAQGFEIIMIGHKGHPEVEGTMGQADDGMLL--VESVDDVARLVVN-------------- 169
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
D ++ QTT+ ET+EI V R V H
Sbjct: 170 ---------------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 207 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 265
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 266 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
>gi|333984328|ref|YP_004513538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylomonas
methanica MC09]
gi|333808369|gb|AEG01039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylomonas
methanica MC09]
Length = 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 150/357 (42%), Gaps = 98/357 (27%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA------ 78
+++ LA GFC GV+RA++I +A F I++ +E++HN TV L+E
Sbjct: 1 MQIVLANPRGFCAGVDRAIEIVDQAIDTFGA-PIYVRHEVVHNRTVVDGLKEKGAIFIED 59
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ ++PV G ++ A G + E + + + D TCP V+KV V
Sbjct: 60 LSDVPV------------GSYLIFSAHGVSKEVQREAEERQLTVFDATCPLVTKVHMQVA 107
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
KH K D I+ G H E T G+ + +
Sbjct: 108 KHAKQDREVILIGHAGHPEVEGTM------------------------GQYEKCTEHGDI 143
Query: 199 FLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
+L + + V + +PD + QTT+ +T K V+ + E
Sbjct: 144 YLVETPEDVKSLQVNNPD----NLAYVTQTTLSMTDT-------------KVMVDALRER 186
Query: 257 FISF-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSY 299
F S + IC ATQ RQDA++ + + DLILVV EIAE G P+Y
Sbjct: 187 FSSIKEQKKDDICYATQNRQDAVHDL-SKISDLILVVGSPNSSNSNRLREIAEQLGKPAY 245
Query: 300 WIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
ID+ H +L K+ WL G +G+T+GAS P+ V++V+ ++
Sbjct: 246 LIDT---------------HTDL--KKEWL-DGINVVGVTAGASAPEVLVQEVINQL 284
>gi|338997877|ref|ZP_08636561.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
TD01]
gi|338765240|gb|EGP20188.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
TD01]
Length = 329
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 153/350 (43%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V++KLA GFC GV+RA+ I A F I++ +E++HN V + L E + V
Sbjct: 13 VQIKLANPRGFCAGVDRAIDIVNRALDVF-GPPIYVRHEVVHNRFVVETLRERGA--VFV 69
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 70 EELHEVPDDV----IVIFSAHGVSRAVQQEAEQRGLKVFDATCPLVTKVHLEVLRYAKRG 125
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG++ +L + +
Sbjct: 126 QECILIGHEGHPEVEGT---MGRY-------------DTSHGGQI---------YLVEDE 160
Query: 205 KAVSK-GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
+ V+K G + D + QTT+ +T ++ ++ + E F
Sbjct: 161 QDVAKLGVN---DPSALAFVTQTTLSMDDTAKV-------------IDALREKFPEIQGP 204
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ + DL+LVV E++E G P+Y ID+ +
Sbjct: 205 RKDDICYATQNRQDAVRELAADS-DLVLVVGSPNSSNSNRLRELSERMGTPAYLIDNADQ 263
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I P WL +G IG+T+GAS P+ V+ V+ K+
Sbjct: 264 IEPA-----------------WL-EGVSRIGVTAGASAPEVLVKGVIDKL 295
>gi|344172144|emb|CCA84772.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
syzygii R24]
Length = 324
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L
Sbjct: 13 TEADAEVLLAQPRGFCAGVDRAIEIVERALQLF-GAPIYVRHEIVHNAYVVSDLRSKGAV 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 72 FV------QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKM 125
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T A +++ ++ + V ++
Sbjct: 126 RAQGFEIIMIGHKGHPEVEGTMGQADDGMLL--VESVDDVARLVVN-------------- 169
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
D ++ QTT+ ET+EI V R V H
Sbjct: 170 ---------------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 207 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVR 265
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 266 P-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
>gi|307730750|ref|YP_003907974.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
gi|307585285|gb|ADN58683.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
Length = 319
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 79/354 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T AG+ + +V+++++ + +
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIEDVQAL----------------- 160
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
+ DP+ ++ QTT+ + EI +R + +
Sbjct: 161 -----------QLADPE----RIAFVTQTTLSVDDAAEI--------IRALKAKYPSIRE 197
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS
Sbjct: 198 PKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 257 QIDP-----------------VWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|87122998|ref|ZP_01078857.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Marinomonas sp. MED121]
gi|86161715|gb|EAQ63021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas sp.
MED121]
Length = 318
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 83/347 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
++LA GFC GV+RA+ I F E I++ +E++HN V + L+ A + V+E
Sbjct: 5 IQLANPRGFCAGVDRAIDIVNRCLDLF-EAPIYVRHEVVHNKFVVESLK--ARGAVFVDE 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ V ++V+ A G + + ++ +++ D TCP V+KV V ++ +
Sbjct: 62 ----LEQVPDDNLVIFSAHGVSKAVRLEAEHRGLKVFDATCPLVTKVHLEVVRYSRDGME 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G H E T G+Y DY GG + S ++ K K
Sbjct: 118 CVLIGHDGHPEVEGT---MGQY-------------DYSKGGHIYLVESPEDVAKLKVK-- 159
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----N 261
+P+ K+ QTT+ + + ++++ EHF +
Sbjct: 160 -----NPE----KLAFVTQTTLSMDDASVV-------------IDSLREHFPLIRGPKKD 197
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K+ EE L+LVV E++E G +Y ID+
Sbjct: 198 DICYATQNRQDAVKKLAEES-SLVLVVGSVNSSNSNRLKELSERMGTTAYLIDN------ 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++I ++ WL KG +IGIT+GAS P+ V++V+ ++
Sbjct: 251 ADEIQFE-----------WL-KGIDSIGITAGASAPEVLVQEVIARL 285
>gi|385677275|ref|ZP_10051203.1| hydroxymethylbutenyl pyrophosphate reductase [Amycolatopsis sp.
ATCC 39116]
Length = 397
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 142/346 (41%), Gaps = 83/346 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYE--ARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
V LA FC GVERA++I A++ P I++ EI+HN V L +
Sbjct: 90 SVLLAAPRSFCAGVERAIEIVERLLAQRGGP---IYVRKEIVHNRHVVDGLRVRGAVFV- 145
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ D V +G VV A G + + + +++VD TCP V+KV +
Sbjct: 146 -----DELDAVPRGATVVFSAHGVSPAVRAKADRRRLKVVDATCPLVTKVHAEARRFAGQ 200
Query: 144 DYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
T ++ G HEE T A + ++V++++EA V
Sbjct: 201 GDTVLLIGHAGHEEVEGTLGEAPDRTVLVQSVEEARRV---------------------- 238
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ DPD +V QTT+ ET E+ L E + R+F + +
Sbjct: 239 ------RVPDPD----RVTYLTQTTLSVDETAEV--LTE--LRRRFPALR----GPASDD 280
Query: 263 ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPG 310
IC AT RQD++ + V DL+LV VE+AE G P++ ID + + P
Sbjct: 281 ICYATTNRQDSL-RSVARDTDLVLVVGSRNSSNSLRLVELAERAGTPAHLIDDARDVRP- 338
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL G IG+T+GAS P V+ V+ +
Sbjct: 339 ----------------EWL-SGVERIGLTAGASAPPGLVDSVVAAL 367
>gi|334129384|ref|ZP_08503189.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methyloversatilis universalis FAM5]
gi|333445610|gb|EGK73551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methyloversatilis universalis FAM5]
Length = 308
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 138/347 (39%), Gaps = 77/347 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA GFC GVERA+ I A +Q+ I++ +E++HN V L I
Sbjct: 1 MEVLLANPRGFCAGVERAIAIVERALEQY-GAPIYVRHEVVHNKFVVDSLRAKGAIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
V G ++ A G + +++ D TCP V+KV V K +
Sbjct: 58 ----DDLADVPAGATLIFSAHGVPQAVRHDAGARGLRVFDATCPLVTKVHVEVAKMRDAG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+ G E +
Sbjct: 114 REIVMIGHKGHPEVEGTM------------------------GQSEGGMHLVETVTDVQT 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
VS DPD K+ QTT+ + + I + G + + IC
Sbjct: 150 LRVS---DPD----KLAYVTQTTLSVDDAQTIVDALRARFPTIVGPKR--------DDIC 194
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + + DL+LVV E+AE G+P+Y ID+ +I PG
Sbjct: 195 YATQNRQDAV-KFMAPRSDLVLVVGSPNSSNSNRLREVAEQFGVPAYLIDNASQIDPG-- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL G+ +G+T+GAS P+ V+ V+ ++ E+
Sbjct: 252 ---------------WL-DGRKRVGVTAGASAPEVLVDAVIARLREL 282
>gi|218282288|ref|ZP_03488587.1| hypothetical protein EUBIFOR_01169 [Eubacterium biforme DSM 3989]
gi|218216723|gb|EEC90261.1| hypothetical protein EUBIFOR_01169 [Eubacterium biforme DSM 3989]
Length = 299
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 77/325 (23%)
Query: 34 GFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQ--- 90
G+C GV +A+++A + R Q+P++KI I ++HN V K L+ ++ I E K +
Sbjct: 13 GYCGGVLKAIEVAKKTRIQYPDQKITILGNLVHNQYVKKALQSYSIDTI---ENKNKTRY 69
Query: 91 --FDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
D +++G +V+ A G + + K + +VD +CP+V + V+++ DYT
Sbjct: 70 ELLDEISEG-IVIFTAHGVSPKVYEKAKEKGLILVDASCPFVLQTQKIVKQYLDEDYTIF 128
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
GK H E E+ Y + +K +L + KK +
Sbjct: 129 YIGKNKHPEA-----------------ESIY-------------TMSKNVYLIEPKKEI- 157
Query: 209 KGFDPDVDLVKVGIANQTTM----LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+VD K+ + NQTTM LK ++I +L + + IC
Sbjct: 158 ----PNVDTNKIFVTNQTTMSIYELKDTFDQIKQLYPSAIFH--------------DEIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIA----YKLMHG 320
+AT+ RQ A+ + E VD ++VV G P+ +++K + G K + +
Sbjct: 200 NATRVRQQAILDL--ENVDCLIVV------GDPTSN-NTQKLVDIGKKAGIPDVFSIQTV 250
Query: 321 ELVEKENWLPKGQITIGITSGASTP 345
E ++K+++ P TI ITSGASTP
Sbjct: 251 EDIDKKDFEPYS--TIAITSGASTP 273
>gi|145297757|ref|YP_001140598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418358324|ref|ZP_12961001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|166217143|sp|A4SIX8.1|ISPH_AERS4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|142850529|gb|ABO88850.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356688360|gb|EHI52920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 311
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 155/347 (44%), Gaps = 78/347 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + + K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPDDVARLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+PD DL V QTT+ ET ++ + K + G + IC
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDVIDALRKQFPKIQGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ +M VD++LVV E+AE G +Y ID I
Sbjct: 198 YATQNRQDAVREMA-GLVDVMLVVGSRNSSNSNRLRELAEKVGSKAYLIDDASMI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ WL +G IG+T+GAS PD V++V+ ++ E+
Sbjct: 252 ------------ETVWL-EGVKAIGVTAGASAPDVLVQNVIARLREL 285
>gi|161582020|ref|NP_230334.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|255743856|ref|ZP_05417812.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholera
CIRS 101]
gi|262156075|ref|ZP_06029194.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
INDRE 91/1]
gi|379740543|ref|YP_005332512.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
IEC224]
gi|417812733|ref|ZP_12459392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-49A2]
gi|417815600|ref|ZP_12462233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HCUF01]
gi|418331735|ref|ZP_12942676.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-06A1]
gi|418336155|ref|ZP_12945056.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-23A1]
gi|418342992|ref|ZP_12949787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-28A1]
gi|418348159|ref|ZP_12952894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43A1]
gi|418354540|ref|ZP_12957262.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A1]
gi|419825153|ref|ZP_14348659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1033(6)]
gi|421315872|ref|ZP_15766444.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1032(5)]
gi|421319541|ref|ZP_15770100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1038(11)]
gi|421323591|ref|ZP_15774119.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1041(14)]
gi|421327987|ref|ZP_15778502.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1042(15)]
gi|421330912|ref|ZP_15781394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1046(19)]
gi|421334581|ref|ZP_15785049.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1048(21)]
gi|421338473|ref|ZP_15788909.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-20A2]
gi|421345638|ref|ZP_15796024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46A1]
gi|421350516|ref|ZP_15800882.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-25]
gi|422890794|ref|ZP_16933205.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-40A1]
gi|422901669|ref|ZP_16937032.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48A1]
gi|422905894|ref|ZP_16940739.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-70A1]
gi|422912489|ref|ZP_16947015.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HFU-02]
gi|422921912|ref|ZP_16955117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BJG-01]
gi|422924972|ref|ZP_16958002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-38A1]
gi|423144292|ref|ZP_17131906.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-19A1]
gi|423148944|ref|ZP_17136303.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-21A1]
gi|423152789|ref|ZP_17139987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-22A1]
gi|423155594|ref|ZP_17142707.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-32A1]
gi|423159429|ref|ZP_17146401.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-33A2]
gi|423164115|ref|ZP_17150902.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48B2]
gi|423730248|ref|ZP_17703566.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A1]
gi|423748669|ref|ZP_17711576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A2]
gi|423891966|ref|ZP_17725653.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62A1]
gi|423926741|ref|ZP_17730269.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-77A1]
gi|424001296|ref|ZP_17744385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A2]
gi|424005452|ref|ZP_17748436.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-37A1]
gi|424023462|ref|ZP_17763126.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62B1]
gi|424026266|ref|ZP_17765882.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-69A1]
gi|424585591|ref|ZP_18025185.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1030(3)]
gi|424594286|ref|ZP_18033624.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1040(13)]
gi|424598151|ref|ZP_18037349.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio Cholerae
CP1044(17)]
gi|424600905|ref|ZP_18040062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1047(20)]
gi|424605884|ref|ZP_18044849.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1050(23)]
gi|424609718|ref|ZP_18048576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-39A1]
gi|424612519|ref|ZP_18051326.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41A1]
gi|424616342|ref|ZP_18055033.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-42A1]
gi|424621278|ref|ZP_18059806.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-47A1]
gi|424644256|ref|ZP_18082010.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A2]
gi|424651899|ref|ZP_18089423.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A2]
gi|424655848|ref|ZP_18093150.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A2]
gi|429887917|ref|ZP_19369422.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
PS15]
gi|440708979|ref|ZP_20889639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
4260B]
gi|443502794|ref|ZP_21069783.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-64A1]
gi|443506707|ref|ZP_21073497.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-65A1]
gi|443510814|ref|ZP_21077478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-67A1]
gi|443514376|ref|ZP_21080915.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-68A1]
gi|443518189|ref|ZP_21084606.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-71A1]
gi|443523056|ref|ZP_21089296.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-72A2]
gi|443530686|ref|ZP_21096702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-7A1]
gi|443534445|ref|ZP_21100357.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-80A1]
gi|443538036|ref|ZP_21103892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A1]
gi|449053996|ref|ZP_21732664.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. Inaba G4222]
gi|20138764|sp|Q9KU44.2|ISPH_VIBCH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|255738487|gb|EET93876.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholera
CIRS 101]
gi|262030111|gb|EEY48756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
INDRE 91/1]
gi|340042900|gb|EGR03863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HCUF01]
gi|340043194|gb|EGR04154.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-49A2]
gi|341624993|gb|EGS50466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-70A1]
gi|341626164|gb|EGS51570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48A1]
gi|341626643|gb|EGS52006.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-40A1]
gi|341640665|gb|EGS65246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HFU-02]
gi|341647457|gb|EGS71536.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BJG-01]
gi|341648329|gb|EGS72393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-38A1]
gi|356420458|gb|EHH73984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-06A1]
gi|356421172|gb|EHH74677.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-21A1]
gi|356425995|gb|EHH79334.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-19A1]
gi|356433678|gb|EHH86865.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-23A1]
gi|356434189|gb|EHH87371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-22A1]
gi|356437719|gb|EHH90805.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-28A1]
gi|356442763|gb|EHH95598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-32A1]
gi|356447737|gb|EHI00525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43A1]
gi|356449985|gb|EHI02721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-33A2]
gi|356453794|gb|EHI06454.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A1]
gi|356456252|gb|EHI08861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48B2]
gi|378794053|gb|AFC57524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
IEC224]
gi|395922613|gb|EJH33429.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1032(5)]
gi|395922806|gb|EJH33621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1041(14)]
gi|395925866|gb|EJH36663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1038(11)]
gi|395930572|gb|EJH41319.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1042(15)]
gi|395934765|gb|EJH45503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1046(19)]
gi|395937374|gb|EJH48093.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1048(21)]
gi|395944909|gb|EJH55581.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-20A2]
gi|395948583|gb|EJH59228.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46A1]
gi|395954638|gb|EJH65248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-25]
gi|395962386|gb|EJH72685.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A2]
gi|395963579|gb|EJH73842.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A2]
gi|395966400|gb|EJH76525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-42A1]
gi|395974574|gb|EJH84099.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-47A1]
gi|395977437|gb|EJH86847.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1030(3)]
gi|395979125|gb|EJH88489.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1047(20)]
gi|408009444|gb|EKG47350.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-39A1]
gi|408016215|gb|EKG53769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41A1]
gi|408036881|gb|EKG73297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1040(13)]
gi|408044592|gb|EKG80498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio Cholerae
CP1044(17)]
gi|408046301|gb|EKG82001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1050(23)]
gi|408056887|gb|EKG91758.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A2]
gi|408611424|gb|EKK84785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1033(6)]
gi|408627101|gb|EKK99926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A1]
gi|408640510|gb|EKL12300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A2]
gi|408658127|gb|EKL29199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-77A1]
gi|408659156|gb|EKL30211.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62A1]
gi|408848174|gb|EKL88227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-37A1]
gi|408849115|gb|EKL89148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A2]
gi|408873235|gb|EKM12437.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62B1]
gi|408881179|gb|EKM20089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-69A1]
gi|429225085|gb|EKY31371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
PS15]
gi|439975720|gb|ELP51832.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
4260B]
gi|443432914|gb|ELS75435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-64A1]
gi|443436738|gb|ELS82855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-65A1]
gi|443440301|gb|ELS89990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-67A1]
gi|443444396|gb|ELS97670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-68A1]
gi|443448231|gb|ELT04866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-71A1]
gi|443451006|gb|ELT11270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-72A2]
gi|443458887|gb|ELT26282.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-7A1]
gi|443462449|gb|ELT33488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-80A1]
gi|443466469|gb|ELT41127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A1]
gi|448266521|gb|EMB03748.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. Inaba G4222]
Length = 316
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
>gi|253681777|ref|ZP_04862574.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum D str. 1873]
gi|253561489|gb|EES90941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum D str. 1873]
Length = 633
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 81/351 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA+ GFC+GV RAV A +R+++ + I+ +IHN V K L+ + +I +
Sbjct: 1 MKIQLADKAGFCFGVNRAVDTALNSREKY-NKPIYTLGPLIHNNDVVKFLKSKDINSIEL 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ D + + DV+V+ + G + L K I D TCP+V+ + V+K+ +
Sbjct: 60 ED----LDNLKENDVIVIRSHGITPKVFDILKEKKFIIADATCPYVAHIHERVKKYYELG 115
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E + + I+
Sbjct: 116 YKIVIVGDSNHPEVIGINGYCNDTAIIS-------------------------------- 143
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + KV I QTT + E K+ EK ++ + + I+FNTIC
Sbjct: 144 ---KDGLNISKLPAKVCIVAQTT---EKQENFQKVTEK-------IKPLCDELITFNTIC 190
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT+ RQ+A ++ + VD ++V+ EI ++ + I++ K+I
Sbjct: 191 NATKIRQEAA-SILSQNVDTMVVIGGFHSSNTTKLFEICKNNCKNTIHIENVKQIPK--- 246
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
EL+ N IG+T+GASTPD +++ + K+ E E
Sbjct: 247 --------ELINSSN-------NIGVTAGASTPDWIIKEAILKMSEYTNSE 282
>gi|350559914|ref|ZP_08928754.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782182|gb|EGZ36465.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 312
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 144/342 (42%), Gaps = 77/342 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GVERA++I A + F +++ +E++HN V RL V +
Sbjct: 3 VVLANPRGFCAGVERAIEIVERALELF-GAPLYVRHEVVHNRHVVDRLRAGGVVFV---- 57
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ D V G VV+ A G + +Q+ D TCP V+KV V ++ +
Sbjct: 58 --DELDEVPDGQVVIFSAHGVPKRVQDEAARRGLQVFDATCPLVTKVHLEVARYAREGRE 115
Query: 147 SIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE-AFLEKFK 204
++ G H E T FA + GG + + ++ A LE
Sbjct: 116 VVLIGHAGHPEVEGTLGQFAPAH-----------------GGRMYLVEAPEDVAGLE--- 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
VS DPD ++ +QTT+ +T + + R G ++ IC
Sbjct: 156 --VS---DPD----RLAYVSQTTLSMDDTAAVIDALRARFPRIEGPRKMD--------IC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++V + DL+LVV EI G+ SY +D + P
Sbjct: 199 YATQNRQDAVKELVRQ-CDLLLVVGSGNSSNSNRLREIGARAGVESYLVDGPADVEPA-- 255
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL +G+ IG+T+GAS P+ V ++++
Sbjct: 256 ---------------WL-EGKRHIGVTAGASAPEILVRELIE 281
>gi|121535824|ref|ZP_01667624.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosinus
carboxydivorans Nor1]
gi|121305596|gb|EAX46538.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosinus
carboxydivorans Nor1]
Length = 655
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 100/354 (28%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV----- 79
+K+ LAE GFC+GV+RA++ AY Q P ++ IIHNP + +RL E V
Sbjct: 1 MKIILAEYRGFCYGVKRAIETAYACIGQGP---VYTLGPIIHNPQLVQRLSEQGVVMANT 57
Query: 80 -QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ IP V++ + G E +++++VD TCP V K +
Sbjct: 58 LEQIPAGR-------------VIIRSHGVGPEVYDQARARSLEVVDATCPHVRKAQQAAR 104
Query: 139 K-HKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTK 196
+ +KG Y +++ G+ +H E + ++AG+ + +V+ +A+ +
Sbjct: 105 QLAEKGYYVAVV-GEPNHPEVKSIVAWAGERVTVVETPADAQNL---------------- 147
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
+ E+ G+ QTT + I ++ KT R+ V
Sbjct: 148 -PYHEQL-----------------GVVAQTTFASDQFNTIVDIL-KTKCREIEVS----- 183
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
TIC AT +RQ A K+ KVD+++VV E+ +G P+Y +++
Sbjct: 184 ----RTICTATDQRQQAAIKLA-RKVDVMVVVGGKNSANTSRLAELCRLQGCPTYHVETA 238
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ + K +W G T+GIT+GASTPD +E+V K+ E
Sbjct: 239 QEL-----------------KIDWF-TGVQTVGITAGASTPDWIIEEVYSKMQE 274
>gi|121587771|ref|ZP_01677531.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
2740-80]
gi|153818721|ref|ZP_01971388.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae NCTC
8457]
gi|153823999|ref|ZP_01976666.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae B33]
gi|153829359|ref|ZP_01982026.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
623-39]
gi|227080866|ref|YP_002809417.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
M66-2]
gi|229505694|ref|ZP_04395204.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BX 330286]
gi|229508732|ref|ZP_04398225.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
B33]
gi|229519518|ref|ZP_04408961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC9]
gi|229608713|ref|YP_002879361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
MJ-1236]
gi|254291963|ref|ZP_04962743.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
AM-19226]
gi|254851017|ref|ZP_05240367.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae MO10]
gi|297580809|ref|ZP_06942735.1| penicillin tolerance protein LytB [Vibrio cholerae RC385]
gi|298500799|ref|ZP_07010602.1| LytB protein [Vibrio cholerae MAK 757]
gi|360034595|ref|YP_004936358.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. 2010EL-1786]
gi|9655124|gb|AAF93850.1| lytB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547998|gb|EAX58078.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
2740-80]
gi|126510743|gb|EAZ73337.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae NCTC
8457]
gi|126518480|gb|EAZ75703.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae B33]
gi|148875142|gb|EDL73277.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
623-39]
gi|150422102|gb|EDN14069.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
AM-19226]
gi|227008754|gb|ACP04966.1| lytB protein [Vibrio cholerae M66-2]
gi|229344207|gb|EEO09182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC9]
gi|229354256|gb|EEO19186.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
B33]
gi|229357917|gb|EEO22834.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BX 330286]
gi|229371368|gb|ACQ61791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
MJ-1236]
gi|254846722|gb|EET25136.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae MO10]
gi|297535225|gb|EFH74060.1| penicillin tolerance protein LytB [Vibrio cholerae RC385]
gi|297540580|gb|EFH76638.1| LytB protein [Vibrio cholerae MAK 757]
gi|356645749|gb|AET25804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. 2010EL-1786]
Length = 320
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L ++ E+
Sbjct: 259 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 291
>gi|256545242|ref|ZP_05472607.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256399069|gb|EEU12681.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 691
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 156/347 (44%), Gaps = 68/347 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A++ GFC GV R+V +A +A ++ K + ++HNPT KRLE+ V +
Sbjct: 1 MKIIVAKNSGFCNGVRRSVDLANKASEKNI--KTYTLGPLVHNPTQVKRLEKKGVSVVDE 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E K K +V+ + G + L + ++VD TCP + ++ + K +
Sbjct: 59 NEILKI-----KNSQIVIRSHGVSENLKENLKKNSNEVVDATCPVLLNIYKKIIKKEHEG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
YT +I G H E A AS+ II+K+ EA+ +
Sbjct: 114 YTIVIIGDKEHPEIKAMASYVNNGIIIKDETEAKNIT----------------------- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
++ K+ + +QTT E I +EKT N+ + NTIC
Sbjct: 151 -----------NMSKLYVVSQTTNRIDFFENIAHELEKT----------NDDVVIENTIC 189
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELV 323
+AT+ RQ+A K + ++VD ++VV + +IA K + +
Sbjct: 190 NATRLRQEAC-KSLSKEVDCMIVVGGFNSSNTNKLY-----------QIAQKYCENVQRI 237
Query: 324 EKENWLPKGQIT----IGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
E LP +++ IG+ +GASTPD+ +E+V+ ++ ++ EE +
Sbjct: 238 ETVKDLPLQKLSNFNIIGVIAGASTPDQVIEEVVNRMDDLTNEELMN 284
>gi|374622176|ref|ZP_09694703.1| hydroxymethylbutenyl pyrophosphate reductase [Ectothiorhodospira
sp. PHS-1]
gi|373941304|gb|EHQ51849.1| hydroxymethylbutenyl pyrophosphate reductase [Ectothiorhodospira
sp. PHS-1]
Length = 314
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 140/344 (40%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + LA GFC GV+RA++I A F I++ +E++HN V L E I V
Sbjct: 1 MHILLANPRGFCAGVDRAIEIVERALDLF-GTPIYVRHEVVHNRYVVNELREKGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G V+ A G + +++ D TCP V+KV V +H
Sbjct: 58 EE----LDQVPDGATVIFSAHGVPRTVRDEARRRGLRVFDATCPLVTKVHMQVARHAARG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y D GGE+ + + A K
Sbjct: 114 EEVVLIGHAGHPEVDGT---LGQY-------------DRSQGGEIYLVENVEAASRLDVK 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ + QTT+ +T+ I V+ R ++ + IC
Sbjct: 158 HPETLAY-----------VTQTTLSMDDTQGI---VDALRARFPHIQGQRR-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ + E DLILVV EIAE G+ +Y ID + I P
Sbjct: 199 YATQNRQDAIKALAAE-CDLILVVGSPNSSNSNRLREIAEKLGVEAYLIDGAEDIQP--- 254
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL +G+ IG+++GAS P+ V+ VL +
Sbjct: 255 --------------QWL-EGRRRIGVSAGASAPELLVQQVLDHL 283
>gi|168207492|ref|ZP_02633497.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens E str. JGS1987]
gi|169342619|ref|ZP_02863664.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens C str. JGS1495]
gi|169299261|gb|EDS81330.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens C str. JGS1495]
gi|170661181|gb|EDT13864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens E str. JGS1987]
Length = 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 153/345 (44%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLENNDIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D + KGDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 A----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDENHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++R ++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVR------ASKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+ E V+ TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 --LLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
>gi|411010798|ref|ZP_11387127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
aquariorum AAK1]
gi|423199624|ref|ZP_17186207.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila SSU]
gi|404629185|gb|EKB25949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila SSU]
Length = 311
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 153/352 (43%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G AV EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVSKAVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + A + + K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-------------TPADVARLK 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + HF
Sbjct: 155 VK-----NPD-DLCFV---TQTTLSVDETSDV-------------IDALRAHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGAKAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
G WL G IG+T+GAS P+ V+ V+ ++ E+
Sbjct: 252 EAG-----------------WL-AGVKAIGVTAGASAPEVLVQSVITRLREL 285
>gi|421484099|ref|ZP_15931671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii HLE]
gi|400197806|gb|EJO30770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii HLE]
Length = 325
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA+ I A + I++ +EI+HN V + L
Sbjct: 6 TASDAEVLLAQPRGFCAGVDRAIDIVERA-IELHGAPIYVRHEIVHNRYVVEDLRAKGAI 64
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I + D G +VV A G + ++ +Q+ D TCP V+KV V +
Sbjct: 65 FI------DELDDAPSGSIVVFSAHGVSKAVRAEAESRGLQVFDATCPLVTKVHIEVARM 118
Query: 141 KKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ I+ G H E T A G Y++ E V D + G E+N
Sbjct: 119 RAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV-------ETVED-VAGLEVN-------- 162
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
DP+ + QTT+ + + V K + +F ++ E
Sbjct: 163 -------------DPE----NLAYVTQTTL----SVDDAAAVSKALKARF--PSIVEPKK 199
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
S IC ATQ RQDA+ K++ DL+LVV E+AE +G+ SY ID
Sbjct: 200 S--DICYATQNRQDAV-KVMAPDCDLVLVVGSPNSSNSNRLREVAERKGVASYLIDGADS 256
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P WL + IG+T+GAS P+ V+ V+ +V E+
Sbjct: 257 IDPA-----------------WLVDRK-RIGVTAGASAPEILVQQVIDRVKEL 291
>gi|335042506|ref|ZP_08535533.1| penicillin tolerance protein [Methylophaga aminisulfidivorans MP]
gi|333789120|gb|EGL55002.1| penicillin tolerance protein [Methylophaga aminisulfidivorans MP]
Length = 319
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 88/350 (25%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GV+RA+ I A + F +++ +E++HN V L + I VEE
Sbjct: 7 LANPRGFCAGVDRAIDIVERALELF-GAPVYVRHEVVHNRFVVDGLRDKGA--IFVEE-- 61
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
D V G+ ++ A G + + +++++ D TCP V+KV V +++K + I
Sbjct: 62 --VDEVPDGNTLIFSAHGVSKKVQSEGRKRDLKVFDATCPLVTKVHMEVSRYEKQNMECI 119
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G H E T G+Y +S+ +L + + V+
Sbjct: 120 LIGHAGHPEVEGT---MGQY-----------------------TSTEGGMYLVESPEDVA 153
Query: 209 --KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF-----ISFN 261
K +P ++ QTT+ +T + ++ + EHF S +
Sbjct: 154 KLKVKNPQ----RLAFVTQTTLSVDDTSVV-------------IDALREHFPDIIGPSKD 196
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K+ E DL+LVV E++E G P+Y ID+ ++I P
Sbjct: 197 DICYATQNRQDAVKKLANE-CDLVLVVGSVNSSNSNRLRELSEKLGTPAYLIDNAEQIDP 255
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL + + IG+T+GAS P+ V V++K+ ++
Sbjct: 256 -----------------QWL-ENKNRIGLTAGASAPEILVNQVVEKLRDL 287
>gi|269797892|ref|YP_003311792.1| hydroxymethylbutenyl pyrophosphate reductase [Veillonella parvula
DSM 2008]
gi|269094521|gb|ACZ24512.1| hydroxymethylbutenyl pyrophosphate reductase [Veillonella parvula
DSM 2008]
Length = 632
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 83/342 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAANN--DGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D+V ++ G A+ E K + +VD TCP+V K +
Sbjct: 57 QEVS---DIVEGTMIIRSHGVGPAIYE--EAEEKGLHVVDATCPYVKKAQQDAKSVIDEG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G+ +H E + +A I+ +E S+ K +EK
Sbjct: 112 MTLVILGEKNHPEVKSINLWANNEGIIIEDEE----------------SAQKLQVVEKM- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G+ QTT + + I ++EK +++ F TIC
Sbjct: 155 ----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ++ + VDL++V+ E+ D G +Y I++ +
Sbjct: 189 NATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCATYHIETSTEL----- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|385799694|ref|YP_005836098.1| hydroxymethylbutenyl pyrophosphate reductase [Halanaerobium
praevalens DSM 2228]
gi|309389058|gb|ADO76938.1| hydroxymethylbutenyl pyrophosphate reductase [Halanaerobium
praevalens DSM 2228]
Length = 721
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 87/353 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V +E GFC+GVERA+ + EA K+ ++ +IHNP V +RLE+ +N+ V
Sbjct: 4 LEVITSEEAGFCFGVERALDMVLEAAKKNDALNVYTLGPLIHNPQVVERLEK---KNVKV 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D +V++ + G A E + K ++++D TCP+V ++
Sbjct: 61 ASSLAEID----SGIVIIRSHGVAPEVLAKARAKKLKVIDATCPYVKNAQKYAKRLVDEG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---E 201
Y + I+G H E G Y G+S K + + E
Sbjct: 117 YQTFIYGDEDHPE------VQGIY----------------------GASDKKASIIGEKE 148
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K K KVG+ QTT EI L+ T +++ V FN
Sbjct: 149 DLKSIELKA--------KVGLVAQTTKSPESFREIIDLI-ATKVKELKV---------FN 190
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC+ T RQ + K+ E+ VD++ V+ EI P+Y I++ I
Sbjct: 191 TICNTTDVRQSSAKKLAED-VDIMFVIGGHNSANTTRLAEICTVTNTPTYHIETAAEI-- 247
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
K+ WL + +GIT+GASTPD + +V++ + E +E
Sbjct: 248 ---------------KKEWLSEKN-KVGITAGASTPDWLIREVVQLMNEENKE 284
>gi|410478417|ref|YP_006766054.1| penicillin tolerance protein [Leptospirillum ferriphilum ML-04]
gi|424866297|ref|ZP_18290138.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II 'C75']
gi|124515868|gb|EAY57377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
rubarum]
gi|387223094|gb|EIJ77466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II 'C75']
gi|406773669|gb|AFS53094.1| penicillin tolerance protein [Leptospirillum ferriphilum ML-04]
Length = 302
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 162/350 (46%), Gaps = 81/350 (23%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
L E G C GV+RA+++A++ ++ ++I +EI+HN V K L E V++ V+E K
Sbjct: 5 LPEYAGVCVGVKRAIKMAHKTAEE-ATGPVFILHEIVHNTHVVKDLSERGVKS--VDEVK 61
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ V+KG +++ A G A E + ++N+++VDTTCP V K+ V+ + +YT
Sbjct: 62 E----VDKGTLII-SAHGVAPEVIADARSRNLEVVDTTCPLVWKIHRIVKALAEKNYTIF 116
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G+ +H+E + A +I + + KE E + G + S T ++
Sbjct: 117 LLGERNHDEVMGVQGVAKDHIHIFHKKE-EIAHLPLTEGPVALVSQTTQSI--------- 166
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
K FD +DL ++ ++ ++ NTICDAT+
Sbjct: 167 KYFDEILDL--------------------------LLERYPQLEIH------NTICDATE 194
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+RQ + + + +D+++ V E++ SY +DS +
Sbjct: 195 KRQTSALAIAGD-MDVMITVGSMSSANSRRLQEVSAGLCRASYLVDSANEV--------- 244
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
+ W G+ +G+T+GASTP+ +E V++K+ EI R + +
Sbjct: 245 --------SDTWFKGGE-RVGVTAGASTPEWLIEGVIEKLMEISRAKGFE 285
>gi|295677430|ref|YP_003605954.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1002]
gi|295437273|gb|ADG16443.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1002]
Length = 319
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 157/363 (43%), Gaps = 81/363 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K + I++ +EI+HN V + L +
Sbjct: 5 DTTLAEAEILLAQPRGFCAGVDRAIEIVERAIKLY-GSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I + + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ENLEEVPAGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K ++ + ++ G H E T A + M E + D
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAA-----EGMHLVEDIED---------------- 156
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHF 257
++ + A DP+ ++ QTT+ + E IG L K ++ E
Sbjct: 157 -VQALQLA-----DPE----RIAFVTQTTLSVDDAAEIIGAL-------KAKYPSIREP- 198
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + DL++VV E+AE G+P+Y +DS
Sbjct: 199 -KKQDICYATQNRQDAV-KFMAPQCDLVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE--IKREE 363
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E ++
Sbjct: 257 QIDP-----------------VWV-EGKRRIGVTAGASAPEVLAQAVIARLRELGVRNVR 298
Query: 364 ALQ 366
ALQ
Sbjct: 299 ALQ 301
>gi|406980773|gb|EKE02335.1| hypothetical protein ACD_20C00399G0020 [uncultured bacterium]
Length = 289
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 48/332 (14%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
++LA+ GFC+GV+RAV ++ + +++ P ++I ++IHN V + L + +Q I E
Sbjct: 6 IELAKHAGFCYGVKRAVDLSVKIKEENPSTPVYILGQLIHNTQVIEHLSSLGIQTI--ET 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
++ + + ++ G + + L K QIVD TCP V +V + Y
Sbjct: 64 IPEELN-----GICIIRTHGVTPQTIQELEQKGCQIVDATCPDVKRVQDKARSLAEEGYK 118
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II GK H E +A + A Y S EA + ++
Sbjct: 119 VIIIGKPDHPEVIAIKAHADLY-------------------------SVDEAIVISSEQE 153
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
V K K+GI QTT ++I ++ E+ E + +NTIC A
Sbjct: 154 VYKYLSIIKKAKKIGIVTQTTQTHENFKKILPII---------AEHSTELKV-YNTICSA 203
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T +RQ + E V+L+LVV + + P K + EL E +
Sbjct: 204 TCKRQQEAMTLANE-VELMLVVGSKSSANTTHLA----EIVSPIKKTIHIETEKELDEYK 258
Query: 327 NWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ L K IGIT+GASTP +E V++K+ E
Sbjct: 259 DLLEKAN-KIGITAGASTPGYVIEKVIEKIGE 289
>gi|182626353|ref|ZP_02954108.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens D str. JGS1721]
gi|177908372|gb|EDT70917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens D str. JGS1721]
Length = 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE+ + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D + +GDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 A----DSLKEGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDENHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++R ++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVR------ASKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+E EN TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 -------LLEDENVK-----TIGITAGASTPDWIINEVISKIKEL 282
>gi|229519959|ref|ZP_04409389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TM 11079-80]
gi|229343011|gb|EEO07999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TM 11079-80]
Length = 320
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETVDVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L+++ E+
Sbjct: 259 P-----------------EWFVAAQL-IGVTAGASAPEELVNQILERIKEL 291
>gi|188997063|ref|YP_001931314.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188932130|gb|ACD66760.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 288
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 56/333 (16%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A++ GFC+GV AV +A +A ++ + IIHN V L+ + V+ +
Sbjct: 6 VAQTAGFCFGVRIAVDMAKQAGEKLGHA--YTNGPIIHNKQVVNYLKSIGVEEM------ 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ + + GD V++ + G + L N+ ++D TCP+V KV V++ + Y +
Sbjct: 58 QDYSQLKPGDTVIIRSHGVPPKTERMLKELNINVLDATCPFVKKVHDKVKQLVEEGYFVV 117
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
I G+ H E + T E+ G E F + KK
Sbjct: 118 IIGEEGHPEVIGTLGHLE---------------------EVGGKGVVVENFEDLVKKVPK 156
Query: 209 KGFDPDVDLVKVGIANQTTMLKGE-TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
+ ++G+ QTT + E +G L E T E FNTICDAT
Sbjct: 157 RN--------RIGVVAQTTQSEDFFREAVGYLAENT-----------EELKVFNTICDAT 197
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
RQ+ + K+ E VD+++++ + G K + P Y + + ++ +
Sbjct: 198 SVRQEEVKKIAPE-VDVMIIIG-GKHSGNTQRLYQISKALNPN---TYHIETADELQNQ- 251
Query: 328 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
W + IGI++GASTPD +++V+ K+ EIK
Sbjct: 252 WFENKE-NIGISAGASTPDWIIQEVVNKIKEIK 283
>gi|187925120|ref|YP_001896762.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phytofirmans PsJN]
gi|187716314|gb|ACD17538.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
phytofirmans PsJN]
Length = 319
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 79/354 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPAGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K ++ + ++ G H E T AG + M E + D
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAG-----EGMHLVEDIDD---------------- 156
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHF 257
++ + A DP+ ++ QTT+ + E IG L K ++ E
Sbjct: 157 -VQALQLA-----DPE----RIAFVTQTTLSVDDAAEIIGAL-------KAKYPSIREP- 198
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS
Sbjct: 199 -KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 257 QIDP-----------------VWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|332530378|ref|ZP_08406323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hylemonella
gracilis ATCC 19624]
gi|332040189|gb|EGI76570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hylemonella
gracilis ATCC 19624]
Length = 320
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 81/347 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ LAE GFC GV+RA++I A +F I++ +EI+HN V L+ A I
Sbjct: 13 NAEILLAEPRGFCAGVDRAIEIVERALAKF-GAPIYVRHEIVHNTYVVNDLK--AKGAIF 69
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+EE D V G +V A G + + QI D TCP V+KV V K K
Sbjct: 70 IEE----LDDVPPGATLVFSAHGVSRAVQREAERRGFQIFDATCPLVTKVHVEVAKLHKE 125
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSST--KEAFLE 201
Y I+ G H E T G+L+ EA +
Sbjct: 126 GYEFIMIGHKGHPEVEGTM------------------------GQLDSGIHLVEDEADVA 161
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ + A S+ K+ + QTT+ ++ ++ R V +
Sbjct: 162 RVRLAQSE---------KLAVVTQTTL---SVDDAAGILAAVKARFPQVREPKQ-----Q 204
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K++ +VD+++VV E+A RG+ +Y +D+ +
Sbjct: 205 DICYATQNRQDAV-KVLSGQVDVLVVVGSPTSSNSNRLREVAHKRGVAAYMVDNADEL-- 261
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W +G+ +G+T+GAS P+ V+ V++++
Sbjct: 262 ---------------QADWF-EGKARVGLTAGASAPEILVQQVIERI 292
>gi|170690903|ref|ZP_02882069.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
gi|170144152|gb|EDT12314.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
Length = 314
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 83/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRQKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G A + + ++D TCP V+KV ++
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVAQTVERDAEARGLDVLDATCPLVTKVHVQGRQYVAAG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ E E+ LN T A++
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAEVEH---------LNLPVDTPLAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
QTT+ +T I ++R+F + +T
Sbjct: 162 --------------------TQTTLSVDDTRGI----IDALLRRF------NDIVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ ++ ++VD++LVV EI + G+ SY +
Sbjct: 192 DICYATQNRQAAVREL-SKQVDVLLVVGATNSSNSNRLREIGSESGVASYL------VAD 244
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
G+++ K+ W Q TIGIT+GAS P++ V++V+
Sbjct: 245 GSEV-----------KQEWFANAQ-TIGITAGASAPEEMVKNVI 276
>gi|15842974|ref|NP_338011.1| lytB protein [Mycobacterium tuberculosis CDC1551]
gi|31794562|ref|NP_857055.1| LYTB-like protein LYTB1 [Mycobacterium bovis AF2122/97]
gi|57117100|ref|YP_177967.1| Probable LYTB-related protein LytB1 [Mycobacterium tuberculosis
H37Rv]
gi|121639306|ref|YP_979530.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663245|ref|YP_001284768.1| lytB-related protein LytB1 [Mycobacterium tuberculosis H37Ra]
gi|224991803|ref|YP_002646492.1| lytB-related protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254552484|ref|ZP_05142931.1| lytB-related protein lytB1 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289449078|ref|ZP_06438822.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CPHL_A]
gi|289571617|ref|ZP_06451844.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T17]
gi|289576113|ref|ZP_06456340.1| lytB family protein lytB1 [Mycobacterium tuberculosis K85]
gi|289752096|ref|ZP_06511474.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T92]
gi|289755511|ref|ZP_06514889.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|294995850|ref|ZP_06801541.1| lytB-related protein lytB1 [Mycobacterium tuberculosis 210]
gi|297636042|ref|ZP_06953822.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|297733041|ref|ZP_06962159.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN R506]
gi|306973840|ref|ZP_07486501.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu010]
gi|313660373|ref|ZP_07817253.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN V2475]
gi|339633387|ref|YP_004725029.1| LYTB-related protein LYTB1 [Mycobacterium africanum GM041182]
gi|378773167|ref|YP_005172900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|383309113|ref|YP_005361924.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB327]
gi|386000174|ref|YP_005918473.1| LYTB-like protein LYTB1 [Mycobacterium tuberculosis CTRI-2]
gi|386006218|ref|YP_005924497.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB423]
gi|392387989|ref|YP_005309618.1| lytB1 [Mycobacterium tuberculosis UT205]
gi|397675331|ref|YP_006516866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Rv]
gi|424805944|ref|ZP_18231375.1| penicillin tolerance protein [Mycobacterium tuberculosis W-148]
gi|433628522|ref|YP_007262151.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140060008]
gi|61226768|sp|P0A5I2.1|ISPH2_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|61226769|sp|P0A5I3.1|ISPH2_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|13883313|gb|AAK47825.1| lytB protein [Mycobacterium tuberculosis CDC1551]
gi|31620158|emb|CAD95586.1| PROBABLE LYTB-RELATED PROTEIN LYTB1 [Mycobacterium bovis AF2122/97]
gi|121494954|emb|CAL73440.1| Probable lytB-related protein lytB1 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148507397|gb|ABQ75206.1| putative lytB-related protein LytB1 [Mycobacterium tuberculosis
H37Ra]
gi|224774918|dbj|BAH27724.1| putative lytB-related protein [Mycobacterium bovis BCG str. Tokyo
172]
gi|289422036|gb|EFD19237.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CPHL_A]
gi|289540544|gb|EFD45122.1| lytB family protein lytB1 [Mycobacterium tuberculosis K85]
gi|289545371|gb|EFD49019.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T17]
gi|289692683|gb|EFD60112.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T92]
gi|289696098|gb|EFD63527.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|308356822|gb|EFP45673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu010]
gi|326905220|gb|EGE52153.1| penicillin tolerance protein [Mycobacterium tuberculosis W-148]
gi|339332743|emb|CCC28464.1| putative LYTB-related protein LYTB1 [Mycobacterium africanum
GM041182]
gi|341603331|emb|CCC66012.1| probable lytB-related protein lytB1 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344221221|gb|AEN01852.1| LYTB-like protein LYTB1 [Mycobacterium tuberculosis CTRI-2]
gi|356595488|gb|AET20717.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Mycobacterium
bovis BCG str. Mexico]
gi|378546540|emb|CCE38819.1| lytB1 [Mycobacterium tuberculosis UT205]
gi|380723066|gb|AFE18175.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB327]
gi|380726706|gb|AFE14501.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB423]
gi|395140236|gb|AFN51395.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Mycobacterium
tuberculosis H37Rv]
gi|432156128|emb|CCK53383.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140060008]
gi|440582873|emb|CCG13276.1| putative LYTB-RELATED protein LYTB1 [Mycobacterium tuberculosis
7199-99]
gi|444896937|emb|CCP46203.1| Probable LYTB-related protein LytB1 [Mycobacterium tuberculosis
H37Rv]
Length = 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 136/355 (38%), Gaps = 85/355 (23%)
Query: 20 YTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV 79
Y G V V LA FC GVERA++ E +++ +I+HN V L +
Sbjct: 13 YASGEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA 71
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+ VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 72 --VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAAR 129
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
T + G HEET T A + ++V+ + LN T+ +
Sbjct: 130 FAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLS 180
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
+L QTT+ ET ++ ++ + F
Sbjct: 181 YL-----------------------TQTTLALDETADV-------------IDALRARFP 204
Query: 259 SFNT-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
+ IC AT RQ A+ MV E D++LV VE+A+ G P+Y I
Sbjct: 205 TLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLI 263
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
D I P WL TIG+T+GAS P + V V+ +
Sbjct: 264 DGPDDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 300
>gi|167759010|ref|ZP_02431137.1| hypothetical protein CLOSCI_01357 [Clostridium scindens ATCC 35704]
gi|336422943|ref|ZP_08603082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 5_1_57FAA]
gi|167663417|gb|EDS07547.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
scindens ATCC 35704]
gi|336006789|gb|EGN36821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 285
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 79/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA++ GFC+GV RAV+ YE K EKI+ IIHN V K L V+ I
Sbjct: 1 MKIELAKTAGFCFGVRRAVETVYEQVKHHQGEKIYTYGPIIHNEEVIKDLRRQGVEVI-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV-EKHKKG 143
++ + VV++ + G L K + VD TCP+V K+ V E+ +KG
Sbjct: 59 --NSEEELEKLEEGVVIIRSHGVPKAIYDKLEEKGLDCVDATCPFVKKIHNIVAEESQKG 116
Query: 144 DYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ II G H E +AG + +++ +EA++
Sbjct: 117 SHIVII-GNSEHPEVEGIKGWAGDDVTVIQTAEEAQH----------------------- 152
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
F P ++ + +QTT + +E LVE +++ + I NT
Sbjct: 153 --------FRPPDTARRICVVSQTTFNYNKFKE---LVEIITKKEYDI-------IVLNT 194
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+AT+ERQ + + E+VD ++V+ EI + +Y+I +
Sbjct: 195 ICNATKERQQEA-RQIAERVDAMIVIGDKRSSNTQKLFEICGKACLNTYYIQTLD----- 248
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + VE T+GIT+GASTP+ +E+V V
Sbjct: 249 ---DFDMNQLRSVE----------TVGITAGASTPNNIIEEVQNNV 281
>gi|298526861|ref|ZP_07014270.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308232442|ref|ZP_07664083.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu001]
gi|308370245|ref|ZP_07666897.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu002]
gi|308371325|ref|ZP_07667134.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu003]
gi|308372522|ref|ZP_07667396.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu004]
gi|308373726|ref|ZP_07667639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu005]
gi|308374856|ref|ZP_07667879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu006]
gi|308376099|ref|ZP_07668190.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu007]
gi|308380675|ref|ZP_07669245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu011]
gi|422814614|ref|ZP_16862838.1| lytB-like protein lytB1 [Mycobacterium tuberculosis CDC1551A]
gi|298496655|gb|EFI31949.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308213954|gb|EFO73353.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu001]
gi|308324900|gb|EFP13751.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu002]
gi|308329131|gb|EFP17982.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu003]
gi|308332966|gb|EFP21817.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu004]
gi|308336583|gb|EFP25434.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu005]
gi|308340456|gb|EFP29307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu006]
gi|308344323|gb|EFP33174.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu007]
gi|308360772|gb|EFP49623.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu011]
gi|323717964|gb|EGB27152.1| lytB-like protein lytB1 [Mycobacterium tuberculosis CDC1551A]
Length = 335
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 136/355 (38%), Gaps = 85/355 (23%)
Query: 20 YTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV 79
Y G V V LA FC GVERA++ E +++ +I+HN V L +
Sbjct: 19 YASGEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA 77
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+ VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 78 --VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAAR 135
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
T + G HEET T A + ++V+ + LN T+ +
Sbjct: 136 FAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLS 186
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
+L QTT+ ET ++ ++ + F
Sbjct: 187 YL-----------------------TQTTLALDETADV-------------IDALRARFP 210
Query: 259 SFNT-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
+ IC AT RQ A+ MV E D++LV VE+A+ G P+Y I
Sbjct: 211 TLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLI 269
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
D I P WL TIG+T+GAS P + V V+ +
Sbjct: 270 DGPDDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 306
>gi|423204057|ref|ZP_17190613.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC34]
gi|404628051|gb|EKB24839.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC34]
Length = 311
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 157/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVARLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + +HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRKHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGARAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ +WL +G IG+T+GAS P+ V+ V+ ++ E+
Sbjct: 252 -----------------EASWL-EGVKAIGVTAGASAPEVLVQSVIARLREL 285
>gi|317050910|ref|YP_004112026.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurispirillum
indicum S5]
gi|316945994|gb|ADU65470.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurispirillum
indicum S5]
Length = 289
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 76/351 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ L + GFC+GV+RA+Q+A+E + + + I+ IIHNP V ++L+ + V+ +
Sbjct: 1 MEIVLGKYGGFCFGVKRAIQLAFE-KGERHDGSIYTLGPIIHNPQVVEKLDSLGVREV-- 57
Query: 85 EEGKKQFDVVNKGD-VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+V N + V++ + G + V + D TCP+V ++ + V
Sbjct: 58 ---SDLDEVANPSESAVIIRSHGVGPQVYDRALAMGVAVEDATCPYVKRIHSIVTDLVAQ 114
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+Y +I G+ H E VA ++AG++ +V E+ D LE
Sbjct: 115 EYQVLIVGEPDHPEVVAIKAYAGEHGVV-----VEHPSD-----------------LESI 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K A K G+ QTT + E++ ++V + ++ N FNTI
Sbjct: 153 KLAR-----------KTGVVAQTTQSQ---EKLQQVVSALLAKR------NSEVRIFNTI 192
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIA--------- 314
CDAT RQ ++ D++LV+ ++ G N++A
Sbjct: 193 CDATDVRQKEAVEIASGS-DVVLVI--------------GGRKSGNTNRLAEICIGIQPD 237
Query: 315 -YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
Y + ++ E W +G+ +GIT+GASTPD + +V++ + I RE +
Sbjct: 238 TYHIETAAELQTE-WF-RGKQRVGITAGASTPDYLISEVIEVLQRISRENS 286
>gi|241663906|ref|YP_002982266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
pickettii 12D]
gi|240865933|gb|ACS63594.1| hydroxymethylbutenyl pyrophosphate reductase [Ralstonia pickettii
12D]
Length = 327
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L
Sbjct: 16 TQADAEVLLAQPRGFCAGVDRAIEIVERALELF-GAPIYVRHEIVHNAYVVGDLRNKGAV 74
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + +++ D TCP V+KV V K
Sbjct: 75 FV------QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKM 128
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ + I+ G H E T A +++ E V D L T+ A++
Sbjct: 129 RAQGFEIIMIGHKGHPEVEGTMGQANDGMLL-----VESVDDV---AHLEVKDPTRLAYV 180
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
QTT+ ET+EI V R V H
Sbjct: 181 -----------------------TQTTLSVDETQEI---VAAIKARFPAV-----HEPKK 209
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++
Sbjct: 210 QDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVK 268
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W+ G+ +G+T+GAS P++ + ++ ++
Sbjct: 269 P-----------------EWV-AGKRRVGLTAGASAPEELAQSIVDRL 298
>gi|68172030|ref|ZP_00545320.1| LytB protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88658611|ref|YP_507317.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia
chaffeensis str. Arkansas]
gi|67998548|gb|EAM85311.1| LytB protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88600068|gb|ABD45537.1| hydroxymethylbutenyl pyrophosphate reductase [Ehrlichia chaffeensis
str. Arkansas]
Length = 319
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 83/354 (23%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPE-EKIWITNEIIHNPTVNKRLEEMAVQNI 82
NV+V LA GFC GV RA++I A K + K+++ +EI+HN + L+EM V I
Sbjct: 8 NVEVILANPRGFCAGVSRAIEIVKLAVKYHSDNRKVYVLHEIVHNKYIINSLKEMGVIFI 67
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
D G +++ A G + E + N++I+D TCP V+KV V+ + K
Sbjct: 68 DT------LDQAEDGSILIYSAHGISKEIEHLGQSCNLEIIDATCPLVNKVHKEVQAYDK 121
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
Y I+ G H E T ++V+N+ + + + E+ S
Sbjct: 122 KGYQIILIGHKGHREVEGTMGQITNPVLLVQNLSDIDNI-------EVTNSD-------- 166
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K+ QTT+ +T+EI + K + +KF N
Sbjct: 167 -----------------KLAYVTQTTLSVDDTKEI---INK-LKQKFP----NIKGPDLK 201
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ K + E VD+I V+ E+AE + P++ IDS
Sbjct: 202 DICYATQNRQTAV-KQLSELVDIIFVLGSKNSSNSNRLKELAELKT-PAFLIDS------ 253
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD---KAVEDVLKKVFEIK 360
Y+ ++ ++++ N IGIT+GAS P+ V D+LK+ IK
Sbjct: 254 -----YQEINLDILKDVN-------KIGITAGASAPEILITEVIDLLKQHMNIK 295
>gi|209517440|ref|ZP_03266281.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
gi|209502094|gb|EEA02109.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
Length = 319
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 81/355 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K + I++ +EI+HN V + L +
Sbjct: 5 DTTLAEAEILLAQPRGFCAGVDRAIEIVERAIKLY-GSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I + D V G+ V+ A G + ++ +++ D TCP V+KV V
Sbjct: 64 AIFI------ENLDEVPAGNTVIFSAHGVSKAVRSEAESRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T A + + +V+++++ + +
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAAEGMHLVEDIEDVQAL----------------- 160
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEH 256
LE DP+ ++ QTT+ + E IG L K ++ E
Sbjct: 161 -QLE----------DPE----RIAFVTQTTLSVDDAAEIIGAL-------KAKYPSIREP 198
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS
Sbjct: 199 --KKQDICYATQNRQDAV-KFMAPQCDVVVVVGSPNSSNSNRLRELAEKLGVPAYMVDSP 255
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 256 DQIDP-----------------VWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|148824589|ref|YP_001289343.1| lytB-related protein lytB1 [Mycobacterium tuberculosis F11]
gi|167966942|ref|ZP_02549219.1| lytB-related protein lytB1 [Mycobacterium tuberculosis H37Ra]
gi|253800428|ref|YP_003033429.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 1435]
gi|254233983|ref|ZP_04927308.1| lytB-related protein lytB1 [Mycobacterium tuberculosis C]
gi|254365995|ref|ZP_04982040.1| lytB-related protein lytB1 [Mycobacterium tuberculosis str.
Haarlem]
gi|289759539|ref|ZP_06518917.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T85]
gi|308377327|ref|ZP_07668485.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu008]
gi|308378300|ref|ZP_07668713.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu009]
gi|308406138|ref|ZP_07669520.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu012]
gi|375297655|ref|YP_005101922.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|385992614|ref|YP_005910912.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5180]
gi|385996250|ref|YP_005914548.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5079]
gi|392433866|ref|YP_006474910.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 605]
gi|424949014|ref|ZP_18364710.1| LYTB-like protein [Mycobacterium tuberculosis NCGM2209]
gi|449065494|ref|YP_007432577.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Korea
1168P]
gi|124599512|gb|EAY58616.1| lytB-related protein lytB1 [Mycobacterium tuberculosis C]
gi|134151508|gb|EBA43553.1| lytB-related protein lytB1 [Mycobacterium tuberculosis str.
Haarlem]
gi|148723116|gb|ABR07741.1| lytB-related protein lytB1 [Mycobacterium tuberculosis F11]
gi|253321931|gb|ACT26534.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 1435]
gi|289715103|gb|EFD79115.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T85]
gi|308348255|gb|EFP37106.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu008]
gi|308352980|gb|EFP41831.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu009]
gi|308364377|gb|EFP53228.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu012]
gi|328460160|gb|AEB05583.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|339296204|gb|AEJ48315.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5079]
gi|339299807|gb|AEJ51917.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5180]
gi|358233529|dbj|GAA47021.1| LYTB-like protein [Mycobacterium tuberculosis NCGM2209]
gi|379029741|dbj|BAL67474.1| LYTB-like protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392055275|gb|AFM50833.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 605]
gi|449034002|gb|AGE69429.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 331
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 136/355 (38%), Gaps = 85/355 (23%)
Query: 20 YTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV 79
Y G V V LA FC GVERA++ E +++ +I+HN V L +
Sbjct: 15 YASGEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA 73
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+ VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 74 --VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAAR 131
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGK-YIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
T + G HEET T A + ++V+ + LN T+ +
Sbjct: 132 FAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLS 182
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
+L QTT+ ET ++ ++ + F
Sbjct: 183 YL-----------------------TQTTLALDETADV-------------IDALRARFP 206
Query: 259 SFNT-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWI 301
+ IC AT RQ A+ MV E D++LV VE+A+ G P+Y I
Sbjct: 207 TLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLI 265
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
D I P WL TIG+T+GAS P + V V+ +
Sbjct: 266 DGPDDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 302
>gi|357403779|ref|YP_004915703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
gi|351716444|emb|CCE22104.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
Length = 314
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 149/344 (43%), Gaps = 72/344 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA++I +A + F I++ +E++HN TV L++ I +
Sbjct: 1 MQIILANPRGFCAGVDRAIEIVDQALEAFGA-PIYVRHEVVHNRTVVDGLKDKGA--IFI 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ V G ++ A G + +N+ + D TCP V+KV V KH K D
Sbjct: 58 ED----LSDVPVGSYLIFSAHGVSKRVQEEAEERNLTVFDATCPLVTKVHLQVAKHAKQD 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T M + E + NG E + K
Sbjct: 114 REVILIGHAGHPEVEGT------------MGQYEKCTE-------NGGIYLVETPEDVAK 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V+ +P+ + QTT+ +T K++ + +F ++ E + IC
Sbjct: 155 LKVN---NPN----NLAYVTQTTLSMTDT----KVMVDALRARF--SSIQEQ--KKDDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+Y + K DLILVV EIAE G P+Y ID+ +
Sbjct: 200 YATQNRQDAVYDLA-NKTDLILVVGSPNSSNSNRLREIAEQLGKPAYLIDTANDM----- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W G +G+T+GAS P+ V++V+ ++
Sbjct: 254 ------------SREWF-DGITAVGVTAGASAPEVLVQEVINQL 284
>gi|110802077|ref|YP_698474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens SM101]
gi|122956726|sp|Q0STT3.1|ISPH_CLOPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110682578|gb|ABG85948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens SM101]
Length = 282
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 156/345 (45%), Gaps = 79/345 (22%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV A + +K+F + KI+ +IHN V LE+ + I + +
Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSD 63
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ +NKGDVV++ + G + L +K + + + TCP+V+ + V+K + Y
Sbjct: 64 T----NSLNKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYK 119
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
II G +H E + + I+ N K LE
Sbjct: 120 IIIVGDENHPEVIGINGWCNDSAIITNGKTE----------------------LENIP-- 155
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + +QTT E +E V ++++ ++ ++FNTIC A
Sbjct: 156 -----------AKVCVVSQTT----EKKETWNKVLNEIVKE------SKEIVAFNTICSA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T RQ ++ ++ +E DL+ V+ EI + SY I++ K +
Sbjct: 195 TDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES---- 249
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
L+ E V+ TIGIT+GASTPD + +V+ K+ E+
Sbjct: 250 --LLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
>gi|390571890|ref|ZP_10252121.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|389936124|gb|EIM98021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
Length = 319
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 77/353 (21%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K + I++ +EI+HN V + L +
Sbjct: 5 DTTLAEAEILLAQPRGFCAGVDRAIEIVERAIKLY-GSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I +Q D V G V+ A G + + + +++ D TCP V+KV V
Sbjct: 64 AIFI------EQLDEVPSGSTVIFSAHGVSKAVRAEADERGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K + + ++ G H E T + E Y+ + +++ + + A
Sbjct: 118 KMRAEGFDIVMIGHKGHPEVEGT---------MGQTAEGMYLVE-----DIDDVQALQLA 163
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
DP+ ++ QTT+ + +I + KF +V E
Sbjct: 164 -------------DPE----RIAYVTQTTLSVDDAAQI----IAALKAKF--PSVKEP-- 198
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + + D+++VV E+AE G+PSY +DS +
Sbjct: 199 KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPSYMVDSPDQ 257
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W+ + IG+T+GAS P+ + V+ ++ E+
Sbjct: 258 IDPA-----------------WVADKR-RIGVTAGASAPEALAQAVIGRLREL 292
>gi|375140639|ref|YP_005001288.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium rhodesiae NBB3]
gi|359821260|gb|AEV74073.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium rhodesiae NBB3]
Length = 327
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + I V+
Sbjct: 18 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNVHVVETLAKAGA--IFVD 74
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++++D TCP V+KV ++ + DY
Sbjct: 75 E----TDEVPEGAIVVFSAHGVAPTVHQIAAERNLKVIDATCPLVTKVHNEAKRFARDDY 130
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ + ++G S + K
Sbjct: 131 DILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGPDSVDNVTIRDENK 173
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ +QTT+ ET E V + E F +
Sbjct: 174 VI--------------WLSQTTLSVDETMET-------------VRRLRERFPTLQDPPS 206
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G+ AY + +
Sbjct: 207 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSDTAYLVDYA 262
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G T+G+TSGAS P+ V VL+++ E
Sbjct: 263 DDIDPA-WL-DGVTTVGVTSGASVPELLVRGVLERLAE 298
>gi|50955263|ref|YP_062551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|71152187|sp|Q6ADV0.1|ISPH_LEIXX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|50951745|gb|AAT89446.1| penicillin-tolerance protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 337
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 146/331 (44%), Gaps = 52/331 (15%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G +V LA G+C GV+RAV IA E + +++ +I+HN V LE I
Sbjct: 12 GQKRVLLAAPRGYCAGVDRAV-IAVEKALERYGAPVYVRKQIVHNIHVVSELERQGA--I 68
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G +V A G + + ++ ++ +D TCP V+KV + +
Sbjct: 69 FVDE----VDEVPEGAHIVFSAHGVSPAVVAAAADRGLRAIDATCPLVTKVHREAVRFAR 124
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D+ ++ G HEE TA A + + + N S EA +
Sbjct: 125 DDFEILLIGHEGHEEVEGTAGHAPERVTLVN--------------------SPDEADTIE 164
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K DPD +V +QTT+ ET E +R+ N +
Sbjct: 165 VK-------DPD----RVVWLSQTTLSVDETME--------TVRRLRERFPNLQNPPSDD 205
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC ATQ RQ A+ K V + DL++VV A E + G K AY++ +
Sbjct: 206 ICYATQNRQVAI-KKVAQSADLVIVVGSANSSNSVRLV---EVALEYGAKAAYRVDYASE 261
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ +E WL G T+G+TSGAS P+ V++VL
Sbjct: 262 IRQE-WL-DGVATVGVTSGASVPEVLVQEVL 290
>gi|194292676|ref|YP_002008583.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
gi|193226580|emb|CAQ72531.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
Length = 332
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 83/359 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A + +++ +EI+HN V + L++ + +
Sbjct: 1 MQVILAQPRGFCAGVVRAIEIVDRALVKH-GAPVFVRHEIVHNKHVVQGLKDKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G + E + + + + +D TCP V KV T ++
Sbjct: 58 ----EELDEVPAGAVTIFSAHGVSREVVADASQRQLHAIDATCPLVIKVHTQGRQYAASG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK I+V+N EA + K
Sbjct: 114 RTVILIGHAGHPEVEGTMGQIPGKVILVQN-----------------------EADVAKL 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
D V QTT+ +T I + R+F + + +T
Sbjct: 151 DLP---------DDTPVAYVTQTTLSVDDTRNI----IAALGRRF------SNLVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ + + D+ILV+ EI + G+PSY I + P
Sbjct: 192 DICYATQNRQSAVRDLC-KLADVILVIGATNSSNSNRLREIGTESGVPSYLIAEGSELDP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
W+ + +GIT+GAS P+ VEDV+ + + E +A
Sbjct: 251 A-----------------WVRDANV-VGITAGASAPEAMVEDVIAALRRLGPVEVSTMA 291
>gi|229525337|ref|ZP_04414742.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
bv. albensis VL426]
gi|229338918|gb|EEO03935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
bv. albensis VL426]
Length = 320
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 80/348 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y ID + I
Sbjct: 200 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDID 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W Q+ IG+T+GAS P++ V +L+++
Sbjct: 259 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILERI 288
>gi|359768917|ref|ZP_09272682.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans NBRC 16320]
gi|359313614|dbj|GAB25515.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans NBRC 16320]
Length = 335
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 146/363 (40%), Gaps = 92/363 (25%)
Query: 13 LKENGFEYTWGNV----KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNP 68
L +G T G++ ++ LAE G+C GV+RAV+ A + +++ EI+HN
Sbjct: 7 LAASGPTRTLGDMTESKRILLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNR 65
Query: 69 TVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCP 128
V L E + + D V +G +VV A G + E T +N++ +D TCP
Sbjct: 66 HVVDTLAERGAIFV------GETDEVPEGAIVVFSAHGVSPEVHRTAAQRNLKTIDATCP 119
Query: 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGE 188
V+KV ++ + DY ++ G HEE TA A ++I + G +
Sbjct: 120 LVTKVHQEAKRFARDDYDILLIGHEGHEEVEGTAGEAPEHI------------QLVDGPD 167
Query: 189 LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF 248
+ S + D KV +QTT+ ET E
Sbjct: 168 AVDTVSVR-------------------DESKVIWLSQTTLSVDETMET------------ 196
Query: 249 GVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILV------------VEIA 291
V + E F N IC ATQ RQ A+ M K DL++V VE+A
Sbjct: 197 -VRRLRERFPELNDPPSDDICYATQNRQVAVKAMA-PKCDLVIVVGSKNSSNSVRLVEVA 254
Query: 292 EDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 350
G SY +D + I P WL G T+GITSGAS P+ V
Sbjct: 255 LQNGASASYLVDYAREIDPA-----------------WL-DGVETVGITSGASVPEVLVR 296
Query: 351 DVL 353
V+
Sbjct: 297 GVI 299
>gi|148260826|ref|YP_001234953.1| hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium cryptum
JF-5]
gi|338979875|ref|ZP_08631213.1| Hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium sp. PM]
gi|146402507|gb|ABQ31034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
cryptum JF-5]
gi|338209212|gb|EGO96993.1| Hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium sp. PM]
Length = 327
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 145/347 (41%), Gaps = 82/347 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GVERA++I A +F I++ +EI+HN V + L +
Sbjct: 20 MKVVLAQPRGFCAGVERAIEIVERALAKF-GPPIYVRHEIVHNRHVVEDLRSRGAVFV-- 76
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V G + V A G A + + N+ + ++D TCP V+KV + ++
Sbjct: 77 ----DEISEVPDGAITVFSAHGVARKVQQSAANRALPVIDATCPLVAKVHSEGRRYAGQG 132
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+++G + +
Sbjct: 133 REIVLIGHAGHAEVEGTI------------------------GQIDGRVYLVQTVEDVAS 168
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEE-IGKLVEKTMMRKFGVENVNEHFISFNTI 263
VS DPD K+ QTT+ +T I LVE R G+ + I
Sbjct: 169 LQVS---DPD----KLAYITQTTLSVDDTRGIIAALVE----RFPGIVGPD-----VRDI 212
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ+A+ + + E+VD+ILVV EI + G PSY ID + P
Sbjct: 213 CYATQNRQEAV-RHLAEQVDVILVVGSRNSSNSNRLCEIGAELGRPSYLIDDASHLDP-- 269
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPD---KAVEDVLKK 355
+W KG +G+T+GAS P+ K V D L+K
Sbjct: 270 ---------------SWF-KGIRAVGVTAGASAPEVLVKGVIDGLRK 300
>gi|158929983|gb|ABW82964.1| hydroxymethylbutenyl pyrophosphate reductase [uncultured bacterium
pEAF66]
Length = 315
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 77/346 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA+ GFC GV+RA++I A KQF I++ +EI+HN V + L I
Sbjct: 4 EILLAQPRGFCAGVDRAIEIVERALKQF-GAPIYVRHEIVHNAYVVEDLRSKGAIFI--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G+ +V A G + ++ + I D TCP V+KV V K +K
Sbjct: 60 ---EDLDDVPAGNTLVFSAHGVSKAVRAEAASRGLTIFDATCPLVTKVHVEVAKMRKQGC 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E T + E Y+ + + E + S +
Sbjct: 117 EIIMIGHDGHPEVEGT---------MGQTDEGMYLVETV---EDVAALSVR--------- 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
+PD + +QTT+ +T +I + + K NV E IC
Sbjct: 156 ------NPD----NLAYVSQTTLSVDDTADIIQAI------KGRYPNVIEP--KKGDICY 197
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
AT RQ+A+ K + +V++++VV E+AE +G P+Y +D+ +I P
Sbjct: 198 ATTNRQEAV-KFMAPQVEVVIVVGSPNSSNSNRLREVAEKKGTPAYMVDNASQIDP---- 252
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL G++ IG+T+GAS P+ V+ V+ ++ E+
Sbjct: 253 -------------QWL-VGKLRIGVTAGASAPEVLVQAVIDRLKEL 284
>gi|357411427|ref|YP_004923163.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces
flavogriseus ATCC 33331]
gi|320008796|gb|ADW03646.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces
flavogriseus ATCC 33331]
Length = 346
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 150/349 (42%), Gaps = 86/349 (24%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+ +V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE+
Sbjct: 25 GDRRVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRHEIVHNKYVVQTLEK------ 77
Query: 83 PVEEGKKQFDV---VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+G DV V +G +V+ A G A + + +D TCP V+KV +
Sbjct: 78 ---KGAIFVDVTAEVPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVR 134
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
+ K DY ++ G HEE + T+ A +I + + D + E+ S
Sbjct: 135 YAKEDYDILLIGHEGHEEVIGTSGEAPDHITLVDGP------DDVANVEVRDES------ 182
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFI 258
KV +QTT+ ET E +G L KF N
Sbjct: 183 -------------------KVVWLSQTTLSVDETMETVGAL-----KNKFP----NLLSP 214
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEK 305
+ IC ATQ RQ A+ K+ E+ DL++V VE+A D G P ++ +D
Sbjct: 215 PSDDICYATQNRQVAVKKLAED-ADLVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFAS 273
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
I E WL +G T+G+TSGAS PD V+ VL+
Sbjct: 274 EI-----------------DEAWL-EGVTTVGLTSGASVPDVLVDGVLE 304
>gi|445498856|ref|ZP_21465711.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Janthinobacterium sp. HH01]
gi|444788851|gb|ELX10399.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Janthinobacterium sp. HH01]
Length = 320
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 87/351 (24%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA+ GFC GV+RA++I A QF I++ +EI+HN V + L I
Sbjct: 5 EILLAQPRGFCAGVDRAIEIVERALTQF-GAPIYVRHEIVHNAYVVEDLRNKGAIFI--- 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G+ +V A G + ++ + I D TCP V+KV V K +K
Sbjct: 61 ---EDLDDVPAGNTLVFSAHGVSKAVRAEAESRGLSIFDATCPLVTKVHVEVAKMRKQGC 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E T + +E Y+ + + +++ S TK
Sbjct: 118 EIIMIGHDGHPEVEGT---------MGQTEEGMYLVETV--ADVDKLSVTK--------- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
PD ++ +QTT+ +T +I +E + + +
Sbjct: 158 -------PD----QLAYVSQTTLSVDDTADI-------------IEALKRKYPAIIEPKK 193
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC AT RQ+A+ K + +V++++VV E+AE +G P+Y +D+ +I
Sbjct: 194 GDICYATTNRQEAV-KFMAPQVEVVIVVGSPNSSNSNRLREVAEKKGTPAYMVDNATQID 252
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P WL +G++ IG+T+GAS P+ V V+ ++ E+
Sbjct: 253 P-----------------LWL-EGKLRIGVTAGASAPEVLVHAVIDRLKEL 285
>gi|183980308|ref|YP_001848599.1| LytB-related protein LytB2 [Mycobacterium marinum M]
gi|183173634|gb|ACC38744.1| LytB-related protein LytB2 [Mycobacterium marinum M]
Length = 333
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 137/343 (39%), Gaps = 75/343 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA FC GV RA++ A E +++ +I+HN TV L++ I V+E
Sbjct: 24 VLLASPRSFCAGVHRAIE-AVERVLDRATGPVYVRKQIVHNRTVVAELQDRGA--IFVDE 80
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ D G VVV A G + N + +++VD TCP V+KV + T
Sbjct: 81 LDEIPDPPAPGAVVVFSAHGVSPAVRAAANGRGLEVVDATCPLVTKVHAEAARFAGRGDT 140
Query: 147 SIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEET T A ++V+N + EL+ + ++L
Sbjct: 141 VLLIGHLGHEETDGTLGVAPNSMLLVQNADDVT---------ELDLPEDAQVSYL----- 186
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
QTT+ ET ++ + K + E E IC
Sbjct: 187 ------------------TQTTLAVDETTDVIDALRKRFPKL--AEPPTED------ICY 220
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKI 313
AT RQ A+ +V + D +LV VE+A RG P+Y ID I P
Sbjct: 221 ATTNRQRAVEAIV-RRCDALLVVGSQNSSNSQRLVELARRRGTPAYLIDGPTDIDP---- 275
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+WL TIGIT+GAS P + VE V+ +
Sbjct: 276 -------------HWL-DSTATIGITAGASAPPRLVEQVIDAL 304
>gi|333368106|ref|ZP_08460323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
gi|332977843|gb|EGK14597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
Length = 318
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 79/347 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I EA +F E I++ +E++HN V L + V
Sbjct: 1 MQIYLANPRGFCAGVDRAIAIVNEALTRF-EPPIYVRHEVVHNKFVVSDLANRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
EE + V G +V+ A G AVE+ +++ + D TCP V+KV V K +
Sbjct: 58 EELHE----VPDGSIVIFSAHGVSKAVED--EAERRDLTVFDATCPLVTKVHIEVAKFAR 111
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
+ +I+ G + H E T F+ +Y GGE+ EA +E
Sbjct: 112 DNMDAILIGHHGHPEVEGTMGRFSAQY-----------------GGEI--YLVENEADVE 152
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K + + +PD ++ QTT+ +T +V + +KF N +
Sbjct: 153 KLEVS-----NPD----RLAFVTQTTLSMDDT----AVVIDALRKKFP----NIQGPRKD 195
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K + + +++LVV E+AE +Y ID+
Sbjct: 196 DICYATQNRQDAV-KDLASRCEVVLVVGSPNSSNSNRLRELAERMDCRAYLIDNA----- 249
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
GE+ K+ W G +G+T+GAS P+ +++VL+++
Sbjct: 250 ----------GEM--KKEWF-DGVEAVGVTAGASAPEILIQEVLQQL 283
>gi|227497817|ref|ZP_03928002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
urogenitalis DSM 15434]
gi|226832777|gb|EEH65160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
urogenitalis DSM 15434]
Length = 350
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 146/347 (42%), Gaps = 78/347 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA G+C GV+RAV +A + I++ EI+HN V + L + +
Sbjct: 20 RILLAAPRGYCAGVDRAVDAVEQALAHY-GTPIYVRKEIVHNKYVVEALSQRGAVFV--- 75
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV A G + V +++Q +D TCP V+KV + DY
Sbjct: 76 ---SETDEVPEGARVVFSAHGVSPAVHVQAEARHLQTIDATCPLVTKVHKQAVRFAHDDY 132
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G HEE T A ++I V +NG + +
Sbjct: 133 DIILVGHTGHEEVEGTQGEAPEHIQV-----------------VNGPHEVDQVQVR---- 171
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
DP KV +QTT+ ET E +L+ + + + + IC
Sbjct: 172 ------DPQ----KVVWISQTTLSVDETMETVRLLRERFPQMIDPPS--------DDICY 213
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K + +VD+++VV E+A + G P +Y +D I P
Sbjct: 214 ATQNRQVAV-KTIAPQVDVMIVVGSGNSSNSVRLKEVALEAGAPAAYRVDYASEIDP--- 269
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL +G T+G+TSGAS P+ V DV+ ++ E+
Sbjct: 270 --------------VWL-EGAQTVGLTSGASVPEILVRDVVSRLGEL 301
>gi|73542415|ref|YP_296935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
gi|72119828|gb|AAZ62091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
Length = 324
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 150/353 (42%), Gaps = 81/353 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + ++ +A+ GFC GV+RA++I A +F I++ +EI+HN V L
Sbjct: 6 TAPDAEILMAQPRGFCAGVDRAIEIVERALTRF-GAPIYVRHEIVHNAYVVADLRRKGAV 64
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ ++ D V G V+ A G + + ++ + + D TCP V+KV V K
Sbjct: 65 FV------RELDEVPAGATVIFSAHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKM 118
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+ ++ G H E T M +AE GG L S A L
Sbjct: 119 RAEGCEIVMIGHRGHPEVEGT------------MGQAE-------GGMLLVESVADVAGL 159
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK--TMMRKFGVENVNEHFI 258
D ++ QTT+ ET EI ++ ++R+ ++
Sbjct: 160 VV------------ADPARLAYVTQTTLSVDETLEIVAALKARFPLIREPKKQD------ 201
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + +VD+++VV E+A G+P+Y +D+ +
Sbjct: 202 ----ICYATQNRQDAV-KFMAPQVDVVIVVGSPNSSNSNRLRELAARLGVPAYMVDAPDQ 256
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ P W+ G+ IG+T+GAS P++ + ++ ++ E+
Sbjct: 257 VHP-----------------EWV-AGKRRIGLTAGASAPEELAQSIVARLREL 291
>gi|294944827|ref|XP_002784450.1| hypothetical protein Pmar_PMAR003709 [Perkinsus marinus ATCC
50983]
gi|239897484|gb|EER16246.1| hypothetical protein Pmar_PMAR003709 [Perkinsus marinus ATCC
50983]
Length = 86
Score = 91.3 bits (225), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Query: 1 MNQEYTSDIIKKLKENG-FEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIW 59
+ + + S ++++++ + + T GN+ KLAE++GFCWGVERAV IAYE+R+++P++ IW
Sbjct: 5 LREVHNSTLVEEIQSSSDYTLTVGNITFKLAEAHGFCWGVERAVAIAYESRRRYPDKTIW 64
Query: 60 ITNEIIHNPTVNKRLE-EMAVQ 80
+TNE+IHNPTVN+ L E++V+
Sbjct: 65 MTNEVIHNPTVNRNLXGELSVR 86
>gi|148652390|ref|YP_001279483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. PRwf-1]
gi|172048503|sp|A5WCZ2.1|ISPH_PSYWF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|148571474|gb|ABQ93533.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. PRwf-1]
Length = 318
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 157/347 (45%), Gaps = 79/347 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I EA +F E I++ +E++HN V L + V
Sbjct: 1 MQIYLANPRGFCAGVDRAIAIVNEALARF-EPPIYVRHEVVHNKFVVSDLANRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
EE V G +V+ A G AVE+ +++ + D TCP V+KV V K +
Sbjct: 58 EE----LHEVPDGSIVIFSAHGVSKAVED--EAERRDLTVFDATCPLVTKVHIEVAKFAR 111
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
+++ G H E T F+ +Y GGE++ + EA +E
Sbjct: 112 EKMDAVLIGHQGHPEVEGTMGRFSAQY-----------------GGEIHLVEN--EADVE 152
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
K + + DPD ++ QTT+ +T +V + +KF N +
Sbjct: 153 KLEVS-----DPD----RLAFVTQTTLSMDDT----AVVIDALRKKFP----NIQGPRKD 195
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K + ++ +++LVV E+AE +Y ID+
Sbjct: 196 DICYATQNRQDAV-KDLAQRCEVVLVVGSPNSSNSNRLRELAERMNCKAYLIDNA----- 249
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
GE+ K+ W G +G+T+GAS P+ +++VL ++
Sbjct: 250 ----------GEM--KKEWF-AGVGAVGVTAGASAPEILIQEVLNQL 283
>gi|452961140|gb|EME66447.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
ruber BKS 20-38]
Length = 333
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ +A ++ I++ EI+HN V + L E V +
Sbjct: 23 RVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRHVVETLAERGVVFV--- 78
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G V+V A G + + +N++ +D TCP V+KV ++ + DY
Sbjct: 79 ---DETDEVPEGAVLVFSAHGVSPAVHASAAERNLRTIDATCPLVTKVHQEAKRFARDDY 135
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G + + +
Sbjct: 136 DILLIGHEGHEEVEGTAGEAPDHVQL-----------------VDGPDAVDQVTVR---- 174
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D KV +QTT+ ET E + +L EK + + + IC
Sbjct: 175 ----------DEAKVIWLSQTTLSVDETMETVQRLREKFPLLQDP---------PSDDIC 215
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E DL++VV R + E +G G + A+ + + V+
Sbjct: 216 YATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDYAREVD 271
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G T+GITSGAS P+ V V+ + E
Sbjct: 272 P-TWL-EGVRTVGITSGASVPEVLVRGVIDLLAE 303
>gi|344170253|emb|CCA82652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [blood disease
bacterium R229]
Length = 322
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 77/345 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ +V LA+ GFC GV+RA++I A + F I++ +EI+HN V L +
Sbjct: 14 DAEVLLAQPRGFCAGVDRAIEIVERALQLF-GAPIYVRHEIVHNAYVVSDLRSKGAVFV- 71
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ D V G V+ A G + + +++ D TCP V+KV V K +
Sbjct: 72 -----QELDDVPVGGTVIFSAHGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKMRAQ 126
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ I+ G H E T A +++ ++ + V ++
Sbjct: 127 GFEIIMIGHKGHPEVEGTMGQADDGMLL--VESVDDVARLVVN----------------- 167
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
D ++ QTT+ ET+EI V R V H I
Sbjct: 168 ------------DPARLAYVTQTTLSVDETQEI---VAAIKARFPAV-----HEPKKQDI 207
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +++ P
Sbjct: 208 CYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVRP-- 264
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL G+ +G+T+GAS P++ + ++ ++
Sbjct: 265 ---------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 293
>gi|296136105|ref|YP_003643347.1| hydroxymethylbutenyl pyrophosphate reductase [Thiomonas intermedia
K12]
gi|295796227|gb|ADG31017.1| hydroxymethylbutenyl pyrophosphate reductase [Thiomonas intermedia
K12]
Length = 327
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 145/350 (41%), Gaps = 78/350 (22%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E + ++V LA GFC GV+RA+ I A ++F I++ +EI+HN V L+ A
Sbjct: 13 EISAPELQVLLASPRGFCAGVDRAIDIVERALERF-GAPIYVRHEIVHNTYVVNDLK--A 69
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ V+E + V KG VV A G + +Q+ D TCP V+KV V
Sbjct: 70 KGAVFVDE----LEQVPKGGTVVFSAHGVSQAVRAQALALGLQVFDATCPLVTKVHVEVA 125
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K ++ ++ G H E T A +V+ + + LN + A
Sbjct: 126 KMRRDGLEIVMIGHAGHPEVEGTMGQAEGIYLVQTLDDV---------ARLNIAPDAPLA 176
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
F+ QTT+ + EI + +F H
Sbjct: 177 FV-----------------------TQTTLSVDDAAEI----VAALRARFP----QVHEP 205
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ KM+ +VD+++VV E+A+ G P+Y +D +
Sbjct: 206 KKQDICYATQNRQDAV-KMLAPQVDVVIVVGSPTSSNSNRLREVAQRMGKPAYMVDQVED 264
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + WL +G IG+T+GAS P+ V+ V+ ++
Sbjct: 265 L-----------------RAEWL-EGARQIGLTAGASAPEALVDQVVARL 296
>gi|448747265|ref|ZP_21728926.1| LytB protein [Halomonas titanicae BH1]
gi|445565177|gb|ELY21289.1| LytB protein [Halomonas titanicae BH1]
Length = 334
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 148/346 (42%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA+ I A F I++ +E++HN V + L A + V
Sbjct: 18 IQIKLANPRGFCAGVDRAIDIVNRALDVF-GPPIYVRHEVVHNRFVVETLR--ARGAVFV 74
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 75 EE----LDEVPDDVIVIFSAHGVSRAVQADAERRGLKVFDATCPLVTKVHLEVLRYAKRG 130
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 131 QECILIGHEGHPEVEGT---MGRY-------------DTSHGGRI---------YLVEDE 165
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V+K DP K+ QTT+ +T ++ + G N +
Sbjct: 166 EDVAKLEVNDPS----KLAFVTQTTLSMDDTAKVIDALRDKFAEIQGPRN--------DD 213
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ + DL+LVV E++E G P+Y ID+ +I P
Sbjct: 214 ICYATQNRQDAVRELAAQS-DLLLVVGSPNSSNSNRLRELSERMGTPAYLIDNADQIDP- 271
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL + +G+T+GAS P+ V+ V+ K+
Sbjct: 272 ----------------KWL-ENVARVGVTAGASAPEVLVKGVIAKL 300
>gi|152983734|ref|YP_001348552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PA7]
gi|150958892|gb|ABR80917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PA7]
Length = 309
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 77/344 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC GVERA++ A +QF +++ +EI+HN V + LE + +
Sbjct: 1 MKIILAQPRGFCAGVERAIESVESALEQF-GAPVYVLHEIVHNRHVVRSLEGKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V++ A G A ++ + TCP V KV ++
Sbjct: 58 ----ERLDEVPAGAVLLFSAHGVAQRVEDQAAEAGLRAFNATCPLVLKVHRQGRQYAAKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y I+ G H+E + T G L K +
Sbjct: 114 YRIILIGDIDHQEVIGTV----------------------------GQIPAPVTVLRKVE 145
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ + F D L + QTT+ +T + + + + G + N IC
Sbjct: 146 EVGALPFAADTPLAYI---TQTTLSMDDTRAVVAALRQRYPQIVGPDTRN--------IC 194
Query: 265 DATQERQDAMYKMVEEKVDLILVVE------------IAEDRGIPSYWIDSEKRIGPGNK 312
A Q RQ A+ + + +V L+LVV +AE GIPS
Sbjct: 195 YAVQNRQLAV-RSLSRQVQLVLVVGGHNSANSETLRWVAECEGIPS-------------- 239
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
Y+L +G + +E W G T+G+++GASTP+ ++DVL ++
Sbjct: 240 --YRLANGSELRRE-WF-DGISTVGLSAGASTPEAMIDDVLDRI 279
>gi|421499023|ref|ZP_15946090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas media
WS]
gi|407182063|gb|EKE56053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas media
WS]
Length = 311
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L++ + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKDAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVAKLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + +HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSMDETSDV-------------IDALRQHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGARAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ +WL +G IG+T+GAS P+ V++V+ ++ E+
Sbjct: 252 -----------------EASWL-EGVERIGVTAGASAPEVLVQNVIARLREL 285
>gi|194290591|ref|YP_002006498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
gi|193224426|emb|CAQ70437.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Cupriavidus taiwanensis LMG 19424]
Length = 321
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 149/354 (42%), Gaps = 89/354 (25%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ ++ +A+ GFC GV+RA++I A ++F I++ +EI+HN V L +
Sbjct: 9 DAEILMAQPRGFCAGVDRAIEIVERALERF-GAPIYVRHEIVHNAYVVADLRRKGAVFV- 66
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ D V G V+ A G + E + + + D TCP V+KV V K +
Sbjct: 67 -----GELDEVPAGATVIFSAHGVSREVREDAARRGLHVFDATCPLVTKVHVEVSKLRAQ 121
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G H E T A G ++V+++ + + L + ++ A++
Sbjct: 122 GCEIVMIGHRGHPEVEGTMGQANGGMVLVESVDDVQ---------ALQIADPSRLAYV-- 170
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
QTT+ ET EI V + F
Sbjct: 171 ---------------------TQTTLSVDETSEI-------------VAALKARFPEIRE 196
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + +V++++VV E+AE G+P+Y +D+ +
Sbjct: 197 PKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAERLGVPAYMVDAPE 255
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
++ P W+ G+ IG+T+GAS P+ + +++++ E+
Sbjct: 256 QVRP-----------------EWI-AGKRRIGLTAGASAPEALAQSIVERLREL 291
>gi|383824888|ref|ZP_09980055.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
xenopi RIVM700367]
gi|383336186|gb|EID14591.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
xenopi RIVM700367]
Length = 333
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 54/332 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V + L + +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVETLAKAGAVFV-- 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V +G +VV A G A + +N+Q++D TCP V+KV ++ + D
Sbjct: 80 ----DETDEVPEGAIVVFSAHGVAPTVHASAAARNLQVIDATCPLVTKVHNEAKRFARDD 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE + TA A ++ + ++G ++ +
Sbjct: 136 YDILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPAAVDRVRVR--- 175
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D KV +QTT+ ET +I VE+ R +++ + IC
Sbjct: 176 -----------DENKVIWLSQTTLSVDETMDI---VERLRRRFPKLQDPPS-----DDIC 216
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M + L++VV A S + E +G G++ A+ + + ++
Sbjct: 217 YATQNRQVAVKAMAPQ-CQLVIVVGSANSSN--SMRL-VEVALGAGSRAAHLVDCADDID 272
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL T+G+TSGAS P+ V VL+++
Sbjct: 273 P-RWL-DDVTTVGVTSGASVPEVLVRGVLERL 302
>gi|293604227|ref|ZP_06686635.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii ATCC 43553]
gi|292817452|gb|EFF76525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii ATCC 43553]
Length = 325
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 145/358 (40%), Gaps = 91/358 (25%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA+ I A + I++ +EI+HN V + L
Sbjct: 6 TASDAEVLLAQPRGFCAGVDRAIDIVERA-IELHGAPIYVRHEIVHNRYVVQDLRAKGAI 64
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I + D G +VV A G + + +Q+ D TCP V+KV V +
Sbjct: 65 FI------DELDDAPTGSIVVFSAHGVSKAVRAEAEARGLQVFDATCPLVTKVHIEVARM 118
Query: 141 KKGDYTSIIHGKYSHEETVATASFA--GKYII-----VKNMKEAEYVCDYILGGELNGSS 193
+ I+ G H E T A G Y++ V N++ A
Sbjct: 119 RAAGREIIMIGHKGHPEVEGTLGQAQGGMYLVETVEDVANLQVA---------------- 162
Query: 194 STKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENV 253
DP+ + QTT+ + + V + + +F N+
Sbjct: 163 ------------------DPE----NLAFVTQTTL----SVDDAAAVSQALKARF--PNI 194
Query: 254 NEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWI 301
E S IC ATQ RQDA+ K++ + DL+LVV E+AE +G+ SY I
Sbjct: 195 AEPKKS--DICYATQNRQDAV-KVLAPECDLVLVVGSPNSSNSNRLREVAERKGVASYLI 251
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
D I P WL + IG+T+GAS P+ V+ V+ +V E+
Sbjct: 252 DGADSIDPA-----------------WLVDRK-RIGVTAGASAPEILVQQVIDRVKEL 291
>gi|417819540|ref|ZP_12466156.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE39]
gi|423947642|ref|ZP_17733601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-40]
gi|423976912|ref|ZP_17737149.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-46]
gi|340041102|gb|EGR02070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE39]
gi|408661639|gb|EKL32623.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-40]
gi|408666010|gb|EKL36813.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-46]
Length = 316
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + ++++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDDNIVIFSAHGVSQAVRQEAKDRSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ E+VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W Q+ IG+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
>gi|375102392|ref|ZP_09748655.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora cyanea NA-134]
gi|374663124|gb|EHR63002.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora cyanea NA-134]
Length = 334
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 149/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A +++ +++ EI+HN V + L E V I V+
Sbjct: 20 RVLLAKPRGYCAGVDRAVVTVEKALEKY-GAPVYVRKEIVHNKHVVETLRERGV--IFVD 76
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +VV A G + +N++ +D TCP V+KV V + + DY
Sbjct: 77 ETSE----VPEGALVVFSAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFARDDY 132
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ A ++ + + E
Sbjct: 133 DILLIGHEGHEEVEGTSGEAPDHVQLVDTPE----------------------------- 163
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DVD V V ++ L T V++TM R V + E F
Sbjct: 164 --------DVDKVTVRDPSKVVWLSQTTLS----VDETMER---VNQLKERFPELADPPS 208
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ M E DL+LVV R + E + G K A+ + +
Sbjct: 209 DDICYATSNRQVAVKAMAAE-CDLVLVV---GSRNSSNSKRLVEVALQAGAKDAHLIDYA 264
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V++E WL KG TIG+TSGAS PD V ++L + E
Sbjct: 265 REVDEE-WL-KGAETIGVTSGASVPDVLVLELLDHLAE 300
>gi|148273412|ref|YP_001222973.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831342|emb|CAN02298.1| ispH [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 329
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 148/331 (44%), Gaps = 52/331 (15%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV +A +++ +++ +I+HN V LE M +
Sbjct: 3 GPKKVLLAAPRGYCAGVDRAVVAVEKALERY-GAPVYVRKQIVHNVHVVSTLERMGA--V 59
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE D V +G VV A G + + ++ +Q +D TCP V+KV + K
Sbjct: 60 FVEE----VDEVPEGAHVVFSAHGVSPAVVQGAADRGLQAIDATCPLVTKVHREAVRFAK 115
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D ++ G HEE TA A + IV N E V +
Sbjct: 116 ADMQILLIGHEGHEEVEGTAGEAPEQTIVVNSPEHADVIEV------------------- 156
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
DPD +LV + +QTT+ ET E +R+ N +
Sbjct: 157 --------KDPD-NLVWL---SQTTLSVDETME--------TVRRLRARFPNLQDPPSDD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC ATQ RQ A+ K+ VD LV+ I S + E + G K +Y++ +
Sbjct: 197 ICYATQNRQVAIKKV---AVDADLVIVIGSANSSNSVRL-VEVALEYGAKASYRVDYASE 252
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVL 353
V++E WL G T+G+TSGAS P+ V+++L
Sbjct: 253 VKQE-WL-DGVQTVGVTSGASVPEVLVQELL 281
>gi|117619589|ref|YP_855227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166217142|sp|A0KG42.1|ISPH_AERHH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|117560996|gb|ABK37944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 311
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 156/354 (44%), Gaps = 88/354 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + V
Sbjct: 1 MNILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
EE D V +V+ A G AV EM ++ +++ D TCP V+KV V + +
Sbjct: 58 EE----LDEVPDDSIVIFSAHGVSKAVREMA--KSRALKVFDATCPLVTKVHMEVHRASR 111
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+++ G H E + T G+Y +N + Y+ + + ++ K
Sbjct: 112 KGSEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVAKLK 154
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
K +PD DL V QTT+ ET ++ ++ + HF
Sbjct: 155 VK-------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRAHFPKIQG 190
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID
Sbjct: 191 PRKDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGAKAYLIDDAS 249
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I + +WL G IG+T+GAS P+ V+ V+ ++ E+
Sbjct: 250 MI-----------------EADWL-AGVEAIGVTAGASAPEVLVQSVITRLREL 285
>gi|323359466|ref|YP_004225862.1| penicillin tolerance protein [Microbacterium testaceum StLB037]
gi|323275837|dbj|BAJ75982.1| penicillin tolerance protein [Microbacterium testaceum StLB037]
Length = 353
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 151/334 (45%), Gaps = 52/334 (15%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV +A ++ +++ +I+HN V LE+ I
Sbjct: 27 GQKKVLLAAPRGYCAGVDRAVVAVEKALDRY-GAPVYVRKQIVHNIHVVTELEKKGA--I 83
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE D V +G VV A G + + +++ +Q +D TCP V+KV + +
Sbjct: 84 FVEE----VDEVPEGSHVVFSAHGVSPAVVSAASDRGLQAIDATCPLVTKVHREAVRFAR 139
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A +++ V N E V +
Sbjct: 140 DDYEILLIGHDGHEEVEGTAGEAPEHVTVVNSPEHADVVEV------------------- 180
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
DP KV +QTT+ ET E +R+ + + +
Sbjct: 181 --------RDPS----KVVWLSQTTLSVDETME--------TVRRLRLRFPHLQDPPSDD 220
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC ATQ RQ A+ K V DL++VV A S + E + G K AY++ + +
Sbjct: 221 ICYATQNRQVAI-KKVAVGADLVIVVGSANSSN--SVRL-VEVALEHGAKAAYRVDYVDE 276
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +E WL +G T+G+TSGAS P+ V +VL ++
Sbjct: 277 IRQE-WL-EGVETVGVTSGASVPEVLVTEVLDEL 308
>gi|331269557|ref|YP_004396049.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal
protein S1-like protein [Clostridium botulinum
BKT015925]
gi|329126107|gb|AEB76052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1-like protein [Clostridium botulinum
BKT015925]
Length = 634
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 65/337 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K++LA+ GFC+GV RAV A RK++ + I+ +IHN V K L + +I +
Sbjct: 3 KIQLADKAGFCFGVNRAVDTALNCRKKY-NKPIYTLGPLIHNNDVVKFLNSKDINSIELG 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D + + DV+V+ + G + + L K I D TCP+V+ + V+K+ + Y
Sbjct: 62 D----LDSLKENDVIVIRSHGITPKVLDILKEKKFIIADATCPYVAHIHERVKKYYELGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G +H E + + I+
Sbjct: 118 KIVIVGDSNHPEVIGINGYCNDTAIIS--------------------------------- 144
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
G + KV I QTT + E++ K ++ + + I+FNTIC
Sbjct: 145 --KDGLNIRKLPAKVCIVAQTTEKQENFEKVTK----------KIKPLCDELITFNTICS 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT+ RQ+A ++ + VD ++V+ G S ++ K K +H E VE+
Sbjct: 193 ATKIRQEAA-SILSQNVDTMVVI-----GGFHSS--NTTKLYEICKKNCKNTVHVENVEQ 244
Query: 326 ENWLPKGQI----TIGITSGASTPDKAVEDVLKKVFE 358
+PK I IG+T+GASTPD +++ + K+ E
Sbjct: 245 ---IPKELINSSNNIGVTAGASTPDWIIKEAILKMSE 278
>gi|385674943|ref|ZP_10048871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
sp. ATCC 39116]
Length = 490
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 145/352 (41%), Gaps = 80/352 (22%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G ++ LA FC GVERA++I A +++ +++ +++HN V +RLE + +
Sbjct: 184 GEGELLLASPRSFCAGVERAIEIVERALERY-GAPVYVRRQVVHNAHVVRRLEALGAVFV 242
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK- 141
++ + V +G VL A G A ++++++D TCP V KV T V+++
Sbjct: 243 ------QEVEEVPRGATTVLAAHGVAPAVRAAAQARDLRVIDATCPLVMKVHTEVKRYTG 296
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
+GD +I G HEE T A + I+V EA GG
Sbjct: 297 RGDTVFLI-GHADHEEVEGTVGEAPERIVVVEDAEAAAHVRAPEGG-------------- 341
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
V A QTT+ E +EI ++ R G+E +
Sbjct: 342 ------------------VAYAMQTTLAVDEADEIASVLRS---RFPGIEGPRR-----D 375
Query: 262 TICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGP 309
IC AT RQ A+ + EE DL+LV VE+A RG + +D +
Sbjct: 376 DICYATTNRQRAVTAVAEEA-DLVLVVGSANSSNSVRLVEVARRRGTRARLVDDVSEV-- 432
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
WL G IGIT+GAS P V ++++ + + R
Sbjct: 433 ---------------DLRWL-AGVKRIGITAGASAPPDLVAELVRCLRGLGR 468
>gi|408907335|emb|CCM11568.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
heilmannii ASB1.4]
Length = 274
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 85/346 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++VK+A++YGFC+GV+RA++IA + + +IHNP KRLE+ N+ V
Sbjct: 1 MRVKMAKNYGFCFGVKRAIEIAQKNKNSL------TLGSLIHNPKEIKRLEQD--YNVRV 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V V++ G ++ L +K I+D TCP+V K VEK
Sbjct: 53 QE---EVQSVQADKSVIIRTHGIPKNDLALLKDKGAHIIDATCPYVIKPQQIVEKMSANG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E S++ ++ N EL + +K
Sbjct: 110 YQIVIFGDANHPEVKGVISYSSTPPLIVNSL-----------AELQDQNLSK-------- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+V + +QT T++ KL+E + F + E I FNTIC
Sbjct: 151 --------------RVALVSQT------TKQTPKLLE---IASFLIARCAEVRI-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT + Q+A+ ++ +E VD++++V IA++ SY ++ +
Sbjct: 187 NATFDNQEAVRELSQE-VDIMVIVGGKTSSNTKQLFNIAKEFCADSYLVEDFNDL----- 240
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+E+W + GI++GASTP +E V +K+ E
Sbjct: 241 ------------EESWF-NDKTLCGISAGASTPGWIIEGVREKILE 273
>gi|118473320|ref|YP_889470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis str. MC2 155]
gi|118174607|gb|ABK75503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis str. MC2 155]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + I V+
Sbjct: 5 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVETLAKAGA--IFVD 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A + +N++++D TCP V+KV ++ + DY
Sbjct: 62 E----TDEVPEGAIVVFSAHGVAPTVHQSAAERNLKVIDATCPLVTKVHNEAKRFARDDY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ + ++G S +
Sbjct: 118 DILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGPESVDAVTVR---- 156
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V + E F +
Sbjct: 157 ----------DESKVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 193
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G+ A+ + +
Sbjct: 194 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSDAAHLVDYA 249
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G TIG+TSGAS P+ V VL+++ E
Sbjct: 250 DDIDPA-WL-DGVTTIGVTSGASVPEILVRGVLERLAE 285
>gi|237756865|ref|ZP_04585344.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237690974|gb|EEP60103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 288
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 56/333 (16%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
+A++ GFC+GV AV +A +A ++ + IIHN V L+ + V+ +
Sbjct: 6 VAQTAGFCFGVRIAVDMAKQAGEKLGHA--YTNGPIIHNKQVVNYLKSIGVEEM------ 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ + + GD V++ + G + L +V ++D TCP+V KV V++ + Y +
Sbjct: 58 QGYSQLKPGDTVIIRSHGVPPKTERMLKELHVNVLDATCPFVKKVHDKVKQLVEEGYFVV 117
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
I G+ H E + T E++G E F + KK
Sbjct: 118 IIGEEGHPEVIGTLGHLE---------------------EVDGKGVVVENFEDLVKKVPK 156
Query: 209 KGFDPDVDLVKVGIANQTTMLKGE-TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
+ ++G+ QTT + E +G L E T E FNTICDAT
Sbjct: 157 RN--------RIGVVAQTTQSEDFFREAVGYLAENT-----------EELKVFNTICDAT 197
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
RQ+ + K+ E VD+++++ + G K + P Y + + ++ E
Sbjct: 198 SVRQEEVKKIAPE-VDVMIIIG-GKHSGNTQRLYQISKALNPN---TYHIETADELQ-EQ 251
Query: 328 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
W + IG+++GASTPD +++V+ K+ EIK
Sbjct: 252 WFENKE-NIGVSAGASTPDWIIQEVVNKIKEIK 283
>gi|307726527|ref|YP_003909740.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
gi|307587052|gb|ADN60449.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 144/344 (41%), Gaps = 83/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRQKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G A + + + ++D TCP V+KV ++
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVAQKVERDAQARGLDVLDATCPLVTKVHVQGRQYVAAG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ E E+
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAEVEH------------------------ 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
D VD + QTT+ +T I ++R+F + +T
Sbjct: 150 -------LDLPVD-TPLAYVTQTTLSVDDTRGI----IDALLRRF------TDIVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ ++ ++VD++LVV EI + G+ SY + + P
Sbjct: 192 DICYATQNRQAAVREL-SKQVDVLLVVGATNSSNSNRLREIGSESGVASYLVADGSEVKP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W Q TIGIT+GAS P++ V++V+
Sbjct: 251 -----------------EWFANAQ-TIGITAGASAPEEMVKNVI 276
>gi|184200358|ref|YP_001854565.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kocuria
rhizophila DC2201]
gi|183580588|dbj|BAG29059.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kocuria
rhizophila DC2201]
Length = 351
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 149/333 (44%), Gaps = 52/333 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV IA E + +++ EI+HN V + LEE + VE
Sbjct: 24 KVLLAAPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKEIVHNKHVVQTLEERGA--VFVE 80
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G + + + +++N+ +D TCP V+KV + K DY
Sbjct: 81 E----TDEVPEGSLVVFSAHGVSPAVVQSAHDRNLHTIDATCPLVTKVHREAVRFAKNDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T A ++I + N E T E
Sbjct: 137 EILLIGHVGHEEVEGTFGEAPEHIQIVNSPE---------------DVDTLEV------- 174
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
DPD KV +QTT+ ET E + + + N + IC
Sbjct: 175 -----HDPD----KVVWLSQTTLSVDETME--------TVNRLRAKFPNMIDPPSDDICY 217
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT RQ A+ K + + DL+LVV A S + E + G + A ++ V+
Sbjct: 218 ATSNRQAAI-KEIAPQADLVLVVGSANSSN--SVRL-KEVALEYGARRAERVDFANQVD- 272
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E+W +G T+G+TSGAS P+ V+ VL + E
Sbjct: 273 ESWF-EGVATVGLTSGASVPEVLVQQVLDLLAE 304
>gi|443488737|ref|YP_007366884.1| LytB-related protein LytB2 [Mycobacterium liflandii 128FXT]
gi|442581234|gb|AGC60377.1| LytB-related protein LytB2 [Mycobacterium liflandii 128FXT]
Length = 333
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 136/343 (39%), Gaps = 75/343 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA FC GV RA++ A E +++ +I+HN TV L+ I V+E
Sbjct: 24 VLLASPRSFCAGVHRAIE-AVERVLDRATGPVYVRKQIVHNRTVVAELQNRGA--IFVDE 80
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ D G VVV A G + N + +++VD TCP V+KV + T
Sbjct: 81 LDEIPDPPAPGAVVVFSAHGVSPAVRAAANGRGLEVVDATCPLVTKVHAEAARFAGRGDT 140
Query: 147 SIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEET T A ++V+N + EL+ + ++L
Sbjct: 141 VLLIGHLGHEETDGTLGVAPNSMLLVQNADDVT---------ELDLPEDAQVSYL----- 186
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
QTT+ ET ++ + K + E E IC
Sbjct: 187 ------------------TQTTLAVDETTDVIDALRKRFPKL--AEPPTED------ICY 220
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPGNKI 313
AT RQ A+ +V + D +LV VE+A RG P+Y ID I P
Sbjct: 221 ATTNRQRAVEAIV-RRCDALLVVGSQNSSNSQRLVELARRRGTPAYLIDGPTDIDP---- 275
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+WL TIGIT+GAS P + VE V+ +
Sbjct: 276 -------------HWL-DSTATIGITAGASAPPRLVEQVIDAL 304
>gi|251773108|gb|EES53662.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
ferrodiazotrophum]
Length = 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 87/357 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ L E G C GV+RA+++A++ ++ I++ +EI+HN V L V ++
Sbjct: 1 MEIFLTEYAGVCVGVKRAIKMAHKTAEE-AHGPIFVLHEIVHNTHVVNDLANRGVHSVD- 58
Query: 85 EEGKKQFDV--VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
DV V++G +++ A G A + ++ + +VDTTCP VSK+ V+
Sbjct: 59 -------DVAEVSEGTLII-SAHGVAPSVIADAKSRQLDVVDTTCPLVSKIHRIVKALAD 110
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+YT ++ G+ SH+E + A +I + + KE E+ G T
Sbjct: 111 KNYTILLLGEKSHDEVMGVQGHAKDHIHIFHRKE-----------EIPGLPMTDG----- 154
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
V + +QTT +K E + LVE+ + N
Sbjct: 155 ----------------PVALVSQTTQSIKYFDEILALLVERYPQLEV-----------HN 187
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TICDAT++RQ + + +D+++ V E+A SY +D +
Sbjct: 188 TICDATEKRQTSALA-IAGNMDVMITVGSMSSANSRRLQEVAGGLCPASYLVDKATDV-- 244
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
+ W GQ +G+T+GASTPD +E V+ ++ EI RE ++
Sbjct: 245 ---------------QAEWF-TGQERVGVTAGASTPDYLIEGVIDRLMEISRERGME 285
>gi|171057384|ref|YP_001789733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptothrix
cholodnii SP-6]
gi|170774829|gb|ACB32968.1| hydroxymethylbutenyl pyrophosphate reductase [Leptothrix cholodnii
SP-6]
Length = 327
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 77/343 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ GFC GV+RA++I A +F I++ +EI+HN V L+ A I +E
Sbjct: 11 EVLLAQPRGFCAGVDRAIEIVERALTRF-GAPIYVRHEIVHNTYVVNDLK--AKGAIFIE 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ + V G +V A G + + QI D TCP V+KV V K ++ Y
Sbjct: 68 DLAE----VPPGATLVFSAHGVSQAVRAEATERGFQIFDATCPLVTKVHVEVAKMRREGY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E T G+L+ E + +
Sbjct: 124 EFIMIGHKGHPEVEGTM------------------------GQLDSGIHLVEDVADVAQV 159
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
++ DP ++ + QTT+ + EI V K V E IC
Sbjct: 160 QLA---DPS----RLAVVTQTTLSVDDAAEILAAV------KARFPQVREP--KQQDICY 204
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K++ +VD+++VV E+AE RG P+Y +D+ +
Sbjct: 205 ATQNRQDAV-KLLSAEVDVLIVVGSPTSSNSNRLREVAERRGTPAYMVDNADEL------ 257
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W G+ +G+T+GAS P+ V+ V++++
Sbjct: 258 -----------QGAWF-DGRARVGLTAGASAPELLVQQVIERL 288
>gi|381151613|ref|ZP_09863482.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Methylomicrobium album BG8]
gi|380883585|gb|EIC29462.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Methylomicrobium album BG8]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 76/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA++I +A + F I++ +E++HN TV L+ A + +
Sbjct: 1 MQIVLANPRGFCAGVDRAIEIVDQALETF-GAPIYVRHEVVHNRTVVDGLK--AKGAVFI 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ K+ V G ++ A G + + + + + D TCP V+KV V KH K D
Sbjct: 58 EDLKE----VPVGSYLIFSAHGVSKQVQKEAEERQLTVFDATCPLVTKVHIQVAKHAKSD 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ + +L +
Sbjct: 114 REVILIGHAGHPEVEGTM------------------------GQYEKCTENGGIYLVETP 149
Query: 205 KAVS--KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V+ K +PD + QTT+ +T+ +V+ R G++ + +
Sbjct: 150 EDVANLKVNNPD----NLTYVTQTTLSMTDTK---VMVDALKARFTGIKEQKK-----DD 197
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ + +K D ILVV EIAE G P+Y ID+ K +
Sbjct: 198 ICYATQNRQDAVQDLA-KKADAILVVGSPNSSNSNRLREIAEQLGKPAYLIDTAKDM--- 253
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K+ W G +G+T+GAS P+ V++V+ K+
Sbjct: 254 --------------KQEWF-DGIEVVGVTAGASAPEVLVQEVISKL 284
>gi|399989476|ref|YP_006569826.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis str. MC2 155]
gi|399234038|gb|AFP41531.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
smegmatis str. MC2 155]
Length = 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V + L + +
Sbjct: 28 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVETLAKAGAIFV--- 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G A + +N++++D TCP V+KV ++ + DY
Sbjct: 84 ---DETDEVPEGAIVVFSAHGVAPTVHQSAAERNLKVIDATCPLVTKVHNEAKRFARDDY 140
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ + ++G S +
Sbjct: 141 DILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGPESVDAVTVR---- 179
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V + E F +
Sbjct: 180 ----------DESKVIWLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 216
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G+ A+ + +
Sbjct: 217 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSDAAHLVDYA 272
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL G TIG+TSGAS P+ V VL+++ E
Sbjct: 273 DDIDPA-WL-DGVTTIGVTSGASVPEILVRGVLERLAE 308
>gi|32265637|ref|NP_859669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
hepaticus ATCC 51449]
gi|50400966|sp|Q7VJV5.1|ISPH_HELHP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|32261685|gb|AAP76735.1| penicillin tolerance protein LytB [Helicobacter hepaticus ATCC
51449]
Length = 273
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 146/355 (41%), Gaps = 102/355 (28%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KVK A+ YGFC+GV+RA++IA R Q +IHN +RL+
Sbjct: 1 MKVKFAKKYGFCFGVKRAIRIA--ERNQHAT----TFGPLIHNSREIERLQ--------- 45
Query: 85 EEGKKQFDV--------VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTS 136
K FDV K V++ G +++ L + I+D TCP+V+K
Sbjct: 46 ----KDFDVSLSRSLEEAQKFKSVIVRTHGITKDDLQVLKEHHTHIIDATCPFVTKPQQI 101
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
VEK + Y II G SH E AS+ I+ N+ E +++
Sbjct: 102 VEKMSQEGYQIIIFGDNSHPEVKGVASYGDDVAIIANIDELKHL---------------- 145
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
KK KV + +QTT + E GK+ V VNE
Sbjct: 146 -----TLKK-------------KVALVSQTT---KQPEHFGKIA------ALLVSLVNEC 178
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
I FNTIC AT E Q A+ ++ E D++++V +IA++ SY I+ E
Sbjct: 179 RI-FNTICSATFENQFAVDELSRE-ADIMVIVGGKNSSNTKQLFKIAKEYCTDSYLIEDE 236
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I W G+ GIT+GASTPD + V +K+ +I
Sbjct: 237 NEID-----------------NTWFV-GKELCGITAGASTPDWIISRVQEKIEQI 273
>gi|323529047|ref|YP_004231199.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|407709889|ref|YP_006793753.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
gi|323386049|gb|ADX58139.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|407238572|gb|AFT88770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 143/344 (41%), Gaps = 83/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRQKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G A + + ++D TCP V+KV ++
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVAQTVERDAEARGLDVLDATCPLVTKVHVQGRQYVAAG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ E E+
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAEVEH------------------------ 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
D VD + QTT+ +T I ++RKF + +T
Sbjct: 150 -------LDLPVD-TPLAYVTQTTLSVDDTRGI----IDALLRKF------TDIVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ ++ ++VD++LVV EI + G+ SY + + P
Sbjct: 192 DICYATQNRQAAVREL-SKQVDVLLVVGATNSSNSNRLREIGSESGVASYLVADGSEVKP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W Q TIGIT+GAS P++ V++V+
Sbjct: 251 -----------------EWFANAQ-TIGITAGASAPEEMVKNVI 276
>gi|333921058|ref|YP_004494639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333483279|gb|AEF41839.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolicicoccus
subflavus DQS3-9A1]
Length = 328
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 148/342 (43%), Gaps = 78/342 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ EI+HN V + L E + VE
Sbjct: 18 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRKEIVHNRHVVETLSERGA--VFVE 74
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G + + ++ +D TCP V+KV ++ + D+
Sbjct: 75 E----VDEVPEGALVVFSAHGVSPAVHEAAGTRELRTIDATCPLVTKVHQEAKRFARDDF 130
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G S + +
Sbjct: 131 DILLIGHEGHEEVEGTAGEAPSHVQL-----------------VDGPDSVDKVEVR---- 169
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
D +V +QTT+ ET E VE+ R G+++ + IC
Sbjct: 170 ----------DESRVVWLSQTTLSVDETMET---VERLRKRFPGLQDPPS-----DDICY 211
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNK 312
ATQ RQ A+ M E DL++V VE+A D G SY +D K I P
Sbjct: 212 ATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSLRLVEVALDAGARTSYLVDYAKEINPA-- 268
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL +G T+G+TSGAS P+ V+ VL+
Sbjct: 269 ---------------WL-EGVETVGVTSGASVPEILVDGVLQ 294
>gi|313893418|ref|ZP_07826990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442059|gb|EFR60479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 158 str. F0412]
Length = 632
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 156/344 (45%), Gaps = 87/344 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAAS--SDGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLP-AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+E + +G +++ G A+ E K + IVD TCP V K + +
Sbjct: 57 QE----VSDIEEGTMIIRSHGVGPAIYE--EAEQKGLNIVDATCPHVKKAQQDAKSVIED 110
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
T +I G+ +H E + +A + II+++ + AE K +EK
Sbjct: 111 GMTLVILGEKNHPEVKSINLWANNEGIIIEDEESAE-----------------KLQIVEK 153
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
G+ QTT + + I ++EK +++ F T
Sbjct: 154 M-----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKT 186
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+ATQERQ++ ++ VDL++VV E+ D G +Y I++ +
Sbjct: 187 ICNATQERQNSAVELA-RNVDLMIVVGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL--- 242
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 --------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|406675608|ref|ZP_11082795.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC35]
gi|404626998|gb|EKB23804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC35]
Length = 311
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L++ + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKDAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVAKLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + +HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRKHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGARAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ +WL +G IG+T+GAS P+ V++V+ ++ E+
Sbjct: 252 -----------------EASWL-EGVKAIGVTAGASAPEVLVQNVIARLREL 285
>gi|118474670|ref|YP_892407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
fetus subsp. fetus 82-40]
gi|424821074|ref|ZP_18246112.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
fetus subsp. venerealis NCTC 10354]
gi|166217153|sp|A0RQC4.1|ISPH_CAMFF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|118413896|gb|ABK82316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
fetus subsp. fetus 82-40]
gi|342327853|gb|EGU24337.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
fetus subsp. venerealis NCTC 10354]
Length = 279
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 71/337 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA+SYGFC+GV+RA++IA ++ E+IHN RL+ N V
Sbjct: 1 MKIELAKSYGFCFGVKRAIKIAENSKNA------STIGELIHNSLEIDRLK----NNFNV 50
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ K ++ N+ ++ G E + L +++V+I+D TCP+V+K VEK
Sbjct: 51 KTLKDISELKNEKKAII-RTHGITKEGLANLKSRDVEIIDATCPFVTKPQQIVEKMSSEG 109
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y + G +H E S++ K + V + D E+ LE K
Sbjct: 110 YEIVFFGDINHPEVKGVMSYSSKNVYV--------ILD--------------ESELETVK 147
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P K+ + +QTT + E+ K+V M R V E + FNTIC
Sbjct: 148 L-------PS----KIAVVSQTT---KKIEKFTKIVSYLMQR------VKEVRV-FNTIC 186
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT E Q+A+ ++ + D+++++ ++ S K + P +Y L+E
Sbjct: 187 NATLENQEAVREL-SSRADVMVIIGGKNSSNTKQLYLIS-KNLCPD---SY------LIE 235
Query: 325 KEN-----WLPKGQITIGITSGASTPDKAVEDVLKKV 356
EN W ++ GI++GASTP+ +++V+ K+
Sbjct: 236 SENELELKWFQNKKLC-GISAGASTPEWVIQNVINKL 271
>gi|54026769|ref|YP_121011.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
farcinica IFM 10152]
gi|71152191|sp|Q5YQ94.1|ISPH_NOCFA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|54018277|dbj|BAD59647.1| putative isoprenoid biosynthesis protein [Nocardia farcinica IFM
10152]
Length = 336
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ +A ++ I++ EI+HN V + L E V + V+
Sbjct: 27 RVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRHVVETLRERGV--VFVD 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ + V +G VVV A G + +N+ +D TCP V+KV ++ + DY
Sbjct: 84 DTAE----VPEGAVVVFSAHGVSPAVHEAAAARNLHTIDATCPLVTKVHQEAKRFARDDY 139
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A +++ + + +A
Sbjct: 140 DILLIGHEGHEEVEGTAGEAPEHVQLVDGPDA---------------------------- 171
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
VD V+V N+ L T + + +E V+ + E F S
Sbjct: 172 ---------VDRVRVRDENKVIWLSQTTLSVDETMET-------VQRLRERFPSLQDPPS 215
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E DL++VV R + E + G K A+ + +
Sbjct: 216 DDICYATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALNAGAKAAHLVDYA 271
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ WL +G TIGITSGAS P+ V VL + E
Sbjct: 272 REVDPA-WL-EGVRTIGITSGASVPEILVRGVLDMLAE 307
>gi|399156374|ref|ZP_10756441.1| hydroxymethylbutenyl pyrophosphate reductase [SAR324 cluster
bacterium SCGC AAA001-C10]
Length = 318
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 83/347 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+ + LA GFC GV+RA+ I +A + + I++ +EI+HN V +RL + V+N
Sbjct: 10 INLVLASPRGFCAGVDRAITIVEKALEMY-GAPIYVQHEIVHNKHVVQRLRNEGAVFVEN 68
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
I D + +G + A G + E + +Q++D TCP V+KV +++
Sbjct: 69 I---------DKIPEGSHAIFSAHGVSPEVRKRAEKRKLQVLDATCPLVTKVHREAQRYA 119
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
K ++T I+ G ++H E T A ++I V + E V D +
Sbjct: 120 KEEHTIILIGHHNHVEVKGTVGEAPEHIFV--VGTVEEVSDLKI---------------- 161
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
PD KVG QTT+ +T I +++ G + +
Sbjct: 162 -----------PDEK--KVGYITQTTLSLDDTAGIIIALKERFPEIKGP--------AKD 200
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ+A+ K++ ++VDL+LVV E+AE G+ + I+S + P
Sbjct: 201 DICYATQNRQNAV-KVLSKEVDLVLVVGAQNSSNSVRLLEVAETTGVKARRIESAVELDP 259
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL + + +GIT+GAS P+ V+ ++ ++
Sbjct: 260 -----------------EWLEEVR-NVGITAGASAPEDIVQGIVAEI 288
>gi|91201335|emb|CAJ74395.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 584
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 100/355 (28%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
++KV +A++ GFC GV RA+ I +A ++ K++ +IHNP V + LE
Sbjct: 4 SLKVFVAKTAGFCMGVRRAMDILLDAANEKNIGAKVYTDGPLIHNPQVLEYLE------- 56
Query: 83 PVEEGKKQFDVVN-----KGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV 137
K+ +VN VV+ A G + +K ++ D TCP V +V + +
Sbjct: 57 -----KRDLHIVNDVTDLSNSTVVIRAHGVTPSRRAEIESKGAKVCDATCPHVMRVQSII 111
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
+K+ Y++II G H E V +A G+ +V+NM+ E +
Sbjct: 112 KKYAAQGYSTIIVGDNGHAEVVGLLGYAEGRGHVVENMENIELL---------------- 155
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTT----MLKGETEEIGKLVEKTMMRKFGVEN 252
P +D KV I QTT + K +EI + +
Sbjct: 156 ----------------PPMD--KVCIVAQTTQDRHLFKRAIDEIKRRYPNSE-------- 189
Query: 253 VNEHFISFNTICDATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIPSYWI 301
SF TIC +T +RQD + + + +I+V V I E +G P++ +
Sbjct: 190 ------SFETICSSTYKRQDEVVNLCKSVDAMIVVGGRGSANTTRLVTICESQGTPTFHV 243
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++ I NK+ K+ + TIG+T+GASTP+ ++ V+ KV
Sbjct: 244 ETDSEIDL-NKL--KVFN---------------TIGVTAGASTPNWMIKRVVDKV 280
>gi|291288842|ref|YP_003505658.1| hydroxymethylbutenyl pyrophosphate reductase [Denitrovibrio
acetiphilus DSM 12809]
gi|290886002|gb|ADD69702.1| hydroxymethylbutenyl pyrophosphate reductase [Denitrovibrio
acetiphilus DSM 12809]
Length = 843
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 64/334 (19%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE--MAVQNIPVEE 86
+A+ GFC+GVERAV + + KQF ++ IIHNP + + E + V P E
Sbjct: 5 IADHAGFCFGVERAVSLVEDTSKQFT--GVYTLGPIIHNPQIVSKFAENGIGVCYNPEE- 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
VN+ + VV+ + G E TL ++ V +VD TCP+V K S +K
Sbjct: 62 -------VNEDNTVVVRSHGVTKETYATLASRKVNVVDATCPFVKKAQNSAKKLGNEGAV 114
Query: 147 SIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+++G+ +H E + SF +Y+IV ++ EA +
Sbjct: 115 VVVYGEKNHPEVKSIVSFIDSRYVIVSDVGEASVL------------------------- 149
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
PD + + QTT ++I +++ KT K ++N TIC+
Sbjct: 150 -------PDENC--YALVAQTTQNSESFDKIAEIL-KTKCDKLIIKN---------TICN 190
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT RQ + + +KVD+++V+ + G + + K I + + E ++K
Sbjct: 191 ATSLRQASAIDLA-KKVDIMVVIG-GRNSGNTTRLYEICKNICAN---THHIETKEELKK 245
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
E + G +GIT+GASTP VE+V++ + E+
Sbjct: 246 EIF--DGCRKVGITAGASTPGYLVEEVIEFLKEV 277
>gi|424781785|ref|ZP_18208641.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
showae CSUNSWCD]
gi|421960317|gb|EKU11920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
showae CSUNSWCD]
Length = 276
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 63/333 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA SYGFC+GV+RA++IA A+ IIHN RL + N+
Sbjct: 1 MKIELASSYGFCFGVKRAIKIAENAKDAVT------IGPIIHNNDEINRLNKNF--NVKT 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG + D K ++ G ++ L +++++D TCP+V+K EK K
Sbjct: 53 LEGINEIDGEKKA---IIRTHGITKGDLAELKKSDIKVIDATCPFVTKPQQICEKMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G H E S+A GK +V ++E+E LE
Sbjct: 110 YDIVIFGDEKHPEIKGVKSYAVGKVFVV--LEESE---------------------LESV 146
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K A KV + +QTT + E+ ++V M+R V E + FNTI
Sbjct: 147 KLA-----------QKVAVISQTTR---KVEKFMQIVNYLMLR------VKEVRV-FNTI 185
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT E Q+A+ K + + D+++VV ++ S+ + +Y L+ EL
Sbjct: 186 CNATFENQEAV-KNLAVRADVMVVVGGKNSSNTKQLYLISK----TACEDSY-LVENELE 239
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W +G+ G+++GASTPD ++ V+ K+
Sbjct: 240 LERTWF-EGKNLCGVSAGASTPDWIIQKVIDKL 271
>gi|312194579|ref|YP_004014640.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EuI1c]
gi|311225915|gb|ADP78770.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EuI1c]
Length = 321
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 149/342 (43%), Gaps = 78/342 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ +A + + +++ +I+HN V K LE A I VE
Sbjct: 3 RVLLAKPRGYCAGVDRAVQTVEKALELY-GVPVYVRKQIVHNAHVVKTLE--AKGAIFVE 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V G VV A G A + + ++ +D TCP V+KV + + + DY
Sbjct: 60 ETEE----VPHGATVVFSAHGVAPTVHEEASERKLRTIDATCPLVTKVHSEARRFAREDY 115
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V T A I +++ G + +
Sbjct: 116 DILLIGHEGHEEVVGTTGQAPDRI-------------HLVDGPEDAAD------------ 150
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
K DP +V +QTT+ ET + + G N + IC
Sbjct: 151 --VKVRDPK----RVAYLSQTTLSVDETMTTVDALRERFPHLTGPPNSD--------ICY 196
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K + VDLILV VE+A D G P +Y +D+ +++
Sbjct: 197 ATQNRQVAV-KEIANAVDLILVVGSPNSSNSVRLVEVALDAGAPAAYLVDNCEQV----- 250
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ WL +G T+G+TSGAS P++ V +++
Sbjct: 251 ------------NDAWL-QGVETVGVTSGASVPEELVTELMS 279
>gi|242238042|ref|YP_002986223.1| hydroxymethylbutenyl pyrophosphate reductase [Dickeya dadantii
Ech703]
gi|242130099|gb|ACS84401.1| hydroxymethylbutenyl pyrophosphate reductase [Dickeya dadantii
Ech703]
Length = 316
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 148/355 (41%), Gaps = 74/355 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + I++ +E++HN V L E I
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEVY-GAPIYVRHEVVHNRYVVDGLRERGAIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+Q D V G +++ A G + N+++ + D TCP V+KV V + +
Sbjct: 58 ----EQIDEVPDGAILIFSAHGVSQAVRAEARNRDLTVFDATCPLVTKVHMEVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y N K Y+ + + + + K
Sbjct: 114 MEAILIGHAGHPEVEGT---MGQY---SNPKGGMYLVE-----------GPDDVWSLQVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ F QTT+ +T + + + G + IC
Sbjct: 157 NETNLCF-----------MTQTTLSVDDTSAVIDALRARFPQIIGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+A+ + +E D++LVV E+A+ G PSY IDS I
Sbjct: 198 YATTNRQEAVRNLAQE-ADVVLVVGSKNSSNSNRLAELAQRVGKPSYLIDSADDI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+E+W + +G+T+GAS PD V+ V+K++ + + AL++
Sbjct: 252 ------------QESWFSR-TACVGVTAGASAPDVLVQQVVKRLQGMGGQIALEM 293
>gi|326404220|ref|YP_004284302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
multivorum AIU301]
gi|325051082|dbj|BAJ81420.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
multivorum AIU301]
Length = 321
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 144/347 (41%), Gaps = 82/347 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GVERA++I A +F I++ +EI+HN V + L +
Sbjct: 14 MKVVLAQPRGFCAGVERAIEIVERALAKF-GPPIYVRHEIVHNRHVVEDLRSRGAVFV-- 70
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V G + V A G A + + N+ + + D TCP V+KV + ++
Sbjct: 71 ----DEISEVPDGAITVFSAHGVARKVQQSAANRALPVTDATCPLVAKVHSEGRRYAGQG 126
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+++G + +
Sbjct: 127 REIVLIGHAGHAEVEGTI------------------------GQIDGRVYLVQTVEDVAS 162
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEE-IGKLVEKTMMRKFGVENVNEHFISFNTI 263
VS DPD K+ QTT+ +T I LVE R G+ + I
Sbjct: 163 LQVS---DPD----KLAYITQTTLSVDDTRGIIAALVE----RFPGIVGPD-----VRDI 206
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ+A+ + + E+VD+ILVV EI + G PSY ID + P
Sbjct: 207 CYATQNRQEAV-RHLAEQVDVILVVGSRNSSNSNRLCEIGAELGRPSYLIDDASHLDP-- 263
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPD---KAVEDVLKK 355
+W KG +G+T+GAS P+ K V D L+K
Sbjct: 264 ---------------SWF-KGIRAVGVTAGASAPEVLVKGVIDGLRK 294
>gi|388600508|ref|ZP_10158904.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii DS40M4]
gi|444427190|ref|ZP_21222582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444239560|gb|ELU51122.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 72/353 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 58 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y +E Y++ A +EK K
Sbjct: 114 MEVVLIGHAGHPEVEGTM---GQY-------SSETGGMYLV---------ETPADVEKLK 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V DP DL V +QTT+ ET ++ + + + G + IC
Sbjct: 155 SIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPEIQGPRK--------DDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ + VD+++VV E+AE G P Y D + I P
Sbjct: 200 YATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP--- 255
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
W +G++ +G+T+GAS P++ V +L ++ E+ EA+
Sbjct: 256 --------------EWF-EGKVKVGVTAGASAPEELVNQILDRIKELVGAEAV 293
>gi|421048099|ref|ZP_15511095.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392242264|gb|EIV67751.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898]
Length = 322
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 11 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 68 E----TDEVPEGAIVVFSAHGVAPTVHDKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 124 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 163 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 200 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 255
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ E WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 256 EDIDPE-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 291
>gi|381205128|ref|ZP_09912199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 314
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 167/349 (47%), Gaps = 81/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+++ LA GFC GV+RA+ I +A RK P +++ +EI+HN V +RL+ V I
Sbjct: 6 LEIVLASPRGFCAGVDRAILIVEKALRKWGP--PVYVRHEIVHNRQVVERLQAQGV--IF 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE K+ + KG + A G + +++++VD TCP V+KV +++++
Sbjct: 62 VEEIKE----IPKGSHAIFSAHGVSPVVRQQAREQSLEMVDATCPLVTKVHGEAQRYRRK 117
Query: 144 DYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++T ++ G H E T A + I+++ +++AE V + S + A+L
Sbjct: 118 NFTILLIGHAEHVEVQGTMGEAPERMIVIETIQDAEKV---------QLTDSNQIAYL-- 166
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
QTT+ +T EI K+++K R G+E + +
Sbjct: 167 ---------------------TQTTLSLDDTFEIIKILKK---RFPGIEGPPK-----DD 197
Query: 263 ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQ+A+ K + +V+ ILV VE+A+ +G + ++ +I
Sbjct: 198 ICYATQNRQNAV-KELASQVERILVVGASNSSNTLRLVEVAKAQGTEARRVEEASQIEKT 256
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ VE+ + +IGIT+GAS P+ V+ ++ K+ E+
Sbjct: 257 D-----------VERVD-------SIGITAGASAPEDVVQSIVAKLCEL 287
>gi|206602112|gb|EDZ38594.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II '5-way CG']
Length = 302
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 160/350 (45%), Gaps = 81/350 (23%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
L E G C GV+RA+++A++ ++ ++I +EI+HN V K L E V++ V+E K
Sbjct: 5 LPEYAGVCVGVKRAIKMAHKTAEE-ATGPVFILHEIVHNTHVVKDLSERGVKS--VDEVK 61
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ V+KG +++ A G A E + ++N++++DTTCP V K+ V+ + +YT
Sbjct: 62 E----VDKG-TLIISAHGVAPEVIADARSRNLEVIDTTCPLVWKIHRIVKALAEKNYTIF 116
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G+ +H+E + A +I + F K
Sbjct: 117 LLGERNHDEVMGVQGVAKDHIHI-------------------------------FHKKEE 145
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
P D V + +QTT +EI + ++ ++ ++ NTICDAT+
Sbjct: 146 IAHLPQTD-GPVALVSQTTQSIKYFDEILDM----LLERYPQLEIH------NTICDATE 194
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+RQ + + + +D+++ V E++ SY +DS +
Sbjct: 195 KRQTSALAIAGD-MDVMITVGSMSSANSRRLQEVSAGLCRASYLVDSANEV--------- 244
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
++W G+ +G+T+GASTP+ +E V++K+ EI R + +
Sbjct: 245 --------SDSWFKGGE-RVGVTAGASTPEWLIEGVIEKLMEISRAKGFE 285
>gi|365869247|ref|ZP_09408794.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|363998704|gb|EHM19910.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
Length = 327
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 16 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 72
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 73 E----TDEVPEGAIVVFSAHGVAPTVHDKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 128
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 129 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 167
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 168 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 204
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 205 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 260
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ E WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 261 EDIDPE-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 296
>gi|375264515|ref|YP_005021958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
EJY3]
gi|369839839|gb|AEX20983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
EJY3]
Length = 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 151/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + +++ + D TCP V+KV V + + +
Sbjct: 58 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKQRDLTVFDATCPLVTKVHMEVARASRRN 113
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ A +
Sbjct: 114 MEVVLIGHAGHPEVEGTMGQYASETGGMYLVET-----------------------PADV 150
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 151 EKLKAIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +M E VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAVREMASE-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIK 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W G+ +G+T+GAS P++ V +L+++ E+
Sbjct: 255 P-----------------EWF-DGKTKVGVTAGASAPEELVNQILERIKEM 287
>gi|414582523|ref|ZP_11439663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1215]
gi|420876404|ref|ZP_15339777.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0304]
gi|420882393|ref|ZP_15345757.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0421]
gi|420888024|ref|ZP_15351378.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0422]
gi|420897649|ref|ZP_15360988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0708]
gi|420898048|ref|ZP_15361385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0817]
gi|420903766|ref|ZP_15367088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1212]
gi|420970592|ref|ZP_15433791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0921]
gi|392091448|gb|EIU17259.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0421]
gi|392091983|gb|EIU17793.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0304]
gi|392092584|gb|EIU18389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0422]
gi|392096961|gb|EIU22756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0708]
gi|392109071|gb|EIU34850.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0817]
gi|392109606|gb|EIU35381.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1212]
gi|392117675|gb|EIU43443.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1215]
gi|392173354|gb|EIU99022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0921]
Length = 322
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 11 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 68 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 124 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 163 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 200 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 255
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ E WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 256 EDIDPE-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 291
>gi|261416329|ref|YP_003250012.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|385791193|ref|YP_005822316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372785|gb|ACX75530.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302325360|gb|ADL24561.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 310
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA+ + +A ++F I++ +EI+HN V L++ V +
Sbjct: 3 KIVLATPRGFCAGVDRAIHVVEKAIEKF-GTPIYVRHEIVHNKFVVDTLKDKGVVFV--- 58
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV+ A G A +N+Q++D +CP V KV S ++H
Sbjct: 59 ---DELDQVPEGSVVIFSAHGVAEHIYEEAKARNLQVLDASCPLVLKVHFSAKRHYNAGR 115
Query: 146 TSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T G +++N +AE V D EL A++
Sbjct: 116 HIILIGHAGHAEVEGTLGQLPEGAITLIRNENDAETV-DVPADKEL--------AYI--- 163
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ ET +I + +++ G E +
Sbjct: 164 --------------------TQTTLSVAETRKIIEALKRRFPNIIGPEA--------GDL 195
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT RQ A+ ++ E VD++LVV E+ ++G+PS+ I + P
Sbjct: 196 CYATGNRQAAVLELCSE-VDMLLVVGAKNSSNSSRLMELGLEQGLPSHLIADVNDLDPA- 253
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W +G T+GI+SGAS P+ V+ V+
Sbjct: 254 ----------------WF-EGIDTVGISSGASAPEVLVQGVV 278
>gi|238062740|ref|ZP_04607449.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora sp.
ATCC 39149]
gi|237884551|gb|EEP73379.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora sp.
ATCC 39149]
Length = 329
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 62/336 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ EA + + I++ +I+HN V + LE A + VE
Sbjct: 13 RVLLAKPRGYCAGVDRAVQTVEEALRLY-GAPIYVRKQIVHNKHVVRTLE--AKGAVFVE 69
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G V+ A G A E ++++ +D TCP V+KV ++ DY
Sbjct: 70 ENEE----VPEGATVIFSAHGVAPEVYEQARARSLKAIDATCPLVTKVHQEAKRFAAEDY 125
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE + TA A +I +V +A+ V
Sbjct: 126 DILLIGHEGHEEVIGTAGEAPAHIQLVDGPDDADKVTVR--------------------- 164
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DP KV +QTT+ ET E + +L + + + + I
Sbjct: 165 -------DPS----KVVWLSQTTLSVDETLETVARLKSRLPLLQSP---------PSDDI 204
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT RQ + ++ E D++LVV + + +D+ R G A+++
Sbjct: 205 CYATSNRQHVVKEIAPE-CDVVLVVGSRNSSNSVRLVEVALDAGARAGHLVDFAHEI--- 260
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ WL +G T+G+TSGAS PD+ V+DVL +
Sbjct: 261 ----DDAWL-EGAGTVGLTSGASVPDELVQDVLAHL 291
>gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal
protein S1 homolog [Clostridium botulinum Bf]
gi|237795216|ref|YP_002862768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain-containing protein [Clostridium botulinum Ba4
str. 657]
gi|182672058|gb|EDT84019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal
protein S1 homolog [Clostridium botulinum Bf]
gi|229260583|gb|ACQ51616.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate
reductase/ribosomal protein S1 [Clostridium botulinum
Ba4 str. 657]
Length = 644
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 145/331 (43%), Gaps = 59/331 (17%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +E+
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIED 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + IV+TTCP VS + +K+ + Y
Sbjct: 62 ----IDKLNKDDTIIIRSHGVPLQTINYLKDKGLNIVNTTCPHVSNIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ T L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAII-------------------SKDGTNINNLDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLNILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV-EK 325
TQ RQ A K+ EKVD ++V+ + I N +H E V E
Sbjct: 193 TQVRQQAAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIHVENVKEI 244
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ K IG+T+GASTPD +++ + K+
Sbjct: 245 PEHIYKNSNIIGVTAGASTPDWIIKEAINKM 275
>gi|83945319|ref|ZP_00957667.1| LytB protein [Oceanicaulis sp. HTCC2633]
gi|83851153|gb|EAP89010.1| LytB protein [Oceanicaulis alexandrii HTCC2633]
Length = 314
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 55/334 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V+LA GFC GV+RA+QI +A +++ +++ +EI+HN V RLE M +
Sbjct: 7 LTVQLASPRGFCAGVDRAIQIVEKALERY-GAPVYVRHEIVHNKHVVNRLEAMGAVFV-- 63
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K+ D VV A G +N+ VD TCP VSKV ++H K
Sbjct: 64 ----KELDECPDDRPVVFSAHGVPQRVPAEAARRNMLYVDATCPLVSKVHVEAQRHHKAG 119
Query: 145 YTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G H E + T G +++ +++A E F+ K
Sbjct: 120 QEILLIGHAGHPEVIGTMGQLPDGVMHLIETVEDA-------------------ETFVPK 160
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
DP V QTT+ +T +I ++K R G+ ++
Sbjct: 161 ---------DPS----NVAFVTQTTLSVDDTADIVAALQK---RFPGIAAPHK-----ED 199
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQ A+ K + E DL+LVV A + ++ +R G K A + E
Sbjct: 200 ICYATTNRQAAV-KAIGEGADLVLVVG-APNSSNSVRLVEVAERA--GAKTARLVQKAEE 255
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ +WL +G IGI++GAS P++ VE +L +
Sbjct: 256 IDW-SWL-EGVKRIGISAGASAPEELVEGLLSAL 287
>gi|381399043|ref|ZP_09924314.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microbacterium
laevaniformans OR221]
gi|380773787|gb|EIC07220.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microbacterium
laevaniformans OR221]
Length = 353
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 156/347 (44%), Gaps = 65/347 (18%)
Query: 12 KLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVN 71
+L++N G+ +V LA G+C GV+RAV IA E + +++ +I+HN V
Sbjct: 19 RLQDNPVP---GHKRVLLASPRGYCAGVDRAV-IAVEKALERYGAPVYVRKQIVHNIHVV 74
Query: 72 KRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVS 131
LE A + VEE D V +G VV A G + + +++ +Q +D TCP V+
Sbjct: 75 TELE--AKGAVFVEE----VDEVPEGAHVVFSAHGVSPAVVNAASDRGLQAIDATCPLVT 128
Query: 132 KVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNG 191
KV + + D+ ++ G HEE TA A ++ V N
Sbjct: 129 KVHREAVRFARDDFEILLIGHDGHEEVEGTAGEAPDHVTVVN------------------ 170
Query: 192 SSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE 251
S EA + V K D KV +QTT+ ET E V
Sbjct: 171 --SPAEA-----DRVVVK------DPAKVVWLSQTTLSVDETMET-------------VR 204
Query: 252 NVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKR 306
+ E F + IC ATQ RQ A+ K V + DL++VV A S + E
Sbjct: 205 RLRERFPELQDPPSDDICYATQNRQVAI-KKVAKDADLVIVVGSANSSN--SVRL-VEVA 260
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ G K AY++ + +++E WL G T+G+TSGAS P+ V++VL
Sbjct: 261 LEYGAKAAYRVDYAHEIQQE-WL-DGVETVGVTSGASVPEVLVQEVL 305
>gi|385681235|ref|ZP_10055163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
sp. ATCC 39116]
Length = 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 64/334 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A E + +++ EI+HN V + L E V I VE
Sbjct: 10 RVLLAKPRGYCAGVDRAV-VAVEKALELYGPPVYVRKEIVHNRHVVESLRERGV--IFVE 66
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G++VV A G + +N++ +D TCP V+KV V + + DY
Sbjct: 67 ETSE----VPEGELVVFSAHGVSPAVRAEAEERNLRTIDATCPLVTKVHKEVNRFAREDY 122
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE TA A ++ +V ++A V
Sbjct: 123 DILLIGHEGHEEVEGTAGEAPTHVQLVDTAEDAAKV------------------------ 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+ DP KV +QTT+ V++TM R V+ + F +
Sbjct: 159 ----EVRDPS----KVVWLSQTTL----------SVDETMER---VDQLKGRFPNLADPP 197
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC AT RQ A+ M E DL+LVV +++ ++ K+ G + A+ +
Sbjct: 198 SDDICYATSNRQTAVKAMAAE-CDLVLVVG-SKNSSNSQRLVEVAKQAGARD--AHLIDF 253
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
V+ E WL +G T+G+TSGAS PD V D+L
Sbjct: 254 AREVD-EKWL-EGVTTVGVTSGASVPDVLVMDLL 285
>gi|399908663|ref|ZP_10777215.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
KM-1]
Length = 325
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 146/345 (42%), Gaps = 73/345 (21%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+V+++LA GFC GV+RA++I A F I++ +E++HN V L I
Sbjct: 5 SVRIRLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNRFVVDTLRSRGA--IF 61
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE D V +V+ A G + + +++ D TCP V+KV V ++ K
Sbjct: 62 VEE----LDEVPDDVIVIFSAHGVSRAVQEDAERRGLKVFDATCPLVTKVHMEVLRYAKR 117
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T G+Y D GG + ++ +
Sbjct: 118 GQECILIGHAGHPEVEGT---MGRY-------------DTTHGGAIYLVEDEEDVARLEV 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K D ++ QTT+ +T ++++ + +E + + I
Sbjct: 162 K-----------DPARLAFVTQTTLSMDDT---ARVIDALRAKFPEIEGPRK-----DDI 202
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +L+LVV E+AE G P+Y ID +I P
Sbjct: 203 CYATQNRQDAVRELA-AGCELLLVVGSPNSSNSNRLRELAERVGTPAYLIDDASQIDPA- 260
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL +G +GIT+GAS P+ V+ V++++
Sbjct: 261 ----------------WL-QGVSAVGITAGASAPEVLVKGVIERL 288
>gi|254248385|ref|ZP_04941705.1| Penicillin tolerance protein [Burkholderia cenocepacia PC184]
gi|124874886|gb|EAY64876.1| Penicillin tolerance protein [Burkholderia cenocepacia PC184]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 141/346 (40%), Gaps = 81/346 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LAE GFC GV RA+ I A +++ +++ +EI+HN V L+ +
Sbjct: 1 MRVILAEPRGFCAGVVRAIDIVDRALEKY-GAPVYVRHEIVHNRRVVDGLKRKGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL--NNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D + + V V A G V +MV + + ++D TCP V+KV ++
Sbjct: 58 ----ESLDDIPEQAVTVFSAHG--VGQMVEAEARQRGLHVLDATCPLVAKVHVQARRYAS 111
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
T ++ G H E V T A + +E
Sbjct: 112 QGKTVVLIGHAGHPEVVGTLDQAPDATV----------------------------LVES 143
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ F D L + QTT+ +T +I + R G+ N H
Sbjct: 144 KADVAALPFAADAPLAYI---TQTTLSVDDTRDI---IYALKQRYPGIVGPNVH-----D 192
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQ A+ ++ +V+L+LV+ EIA + GIPS+ I +GP
Sbjct: 193 ICYATQNRQTAVRELCR-RVELMLVIGARYSSNTVRLHEIALESGIPSHLIADAGELGP- 250
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G T+GITSGAS P+ V++V+ +
Sbjct: 251 ----------------QWF-QGIATVGITSGASAPETLVDEVIAAL 279
>gi|407368562|ref|ZP_11115094.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
mandelii JR-1]
Length = 315
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A + +PD K+ QTT+ +T ++++ R + + + I
Sbjct: 150 DVAALQVVNPD----KLAFVTQTTLSMDDTS---RVIDALRARFPAIGGPRK-----DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|372490099|ref|YP_005029664.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Dechlorosoma suillum PS]
gi|359356652|gb|AEV27823.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Dechlorosoma suillum PS]
Length = 309
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 144/355 (40%), Gaps = 98/355 (27%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA GFC GVERA+ I A ++F I++ +E++HN V L A + V
Sbjct: 1 MEVILANPRGFCAGVERAIAIVERALERF-GAPIYVRHEVVHNKFVVDGLR--AKGAVFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G V+ A G A + + +++ D TCP V+KV V K ++
Sbjct: 58 EE----LDEVPAGATVIFSAHGVAKAVREEADRRGLKVFDATCPLVTKVHNEVAKMREQG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T +G +NG E
Sbjct: 114 REVIMIGHKGHPEVEGT-----------------------MGQSVNGGMHLVET------ 144
Query: 205 KAVSKGFDPDVDLVKV------GIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENV 253
DVD + V G QTT+ + + G+ + RK
Sbjct: 145 -------REDVDQLMVRFPEQLGFVTQTTLSVDDAANVIQAIRGRFPDAAGPRK------ 191
Query: 254 NEHFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWI 301
+ IC ATQ RQDA+ K + E DL++VV E+A+ RG+ Y +
Sbjct: 192 -------DDICYATQNRQDAV-KHLAESCDLVIVVGSRNSSNSNRLLEVAKLRGVRGYLV 243
Query: 302 DSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
D ++I + WL +G TIG+T+GAS P+ V+ V+ ++
Sbjct: 244 DGAEQI-----------------EAEWL-QGVSTIGVTAGASAPETLVQGVISRL 280
>gi|221135356|ref|ZP_03561659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola sp.
HTCC2999]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 146/346 (42%), Gaps = 74/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V+LA GFC GV+RA+ I A F E I++ +E++HN V L+E + V
Sbjct: 1 MQVQLANPRGFCAGVDRAITIVERALDLF-EHPIYVRHEVVHNKFVVDGLKERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V +V+ A G + + +++ D TCP V+KV V + K
Sbjct: 58 EE----LHQVPDDSIVIFSAHGVSQAVRTEATQRGLKVFDATCPLVTKVHMEVMRASKKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y N + Y+ + + ++A + K
Sbjct: 114 IECILIGHKGHPEVEGT---MGQY---DNPQGGIYLVE-----------TAEDARQLQVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+PD + +QTT+ +T ++ + +T G + IC
Sbjct: 157 -------NPDA----LYYCSQTTLSVDDTADVIDALRETFPNIDGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ +M DL+LVV E+A G PSY ID I P
Sbjct: 198 YATQNRQDAVREMA-VSCDLLLVVGATNSSNSNRLSELAVKLGTPSYLIDDASMIQP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G+ IG+T+GAS P+ V+ V+ + E
Sbjct: 254 --------------QWL-EGKQAIGVTAGASAPEILVQGVIDALHE 284
>gi|226365341|ref|YP_002783124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
opacus B4]
gi|254806912|sp|C1AYI4.1|ISPH_RHOOB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226243831|dbj|BAH54179.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
opacus B4]
Length = 336
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 150/349 (42%), Gaps = 62/349 (17%)
Query: 10 IKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPT 69
I + ++G G +V LAE G+C GV+RAV+ +A ++ I++ EI+HN
Sbjct: 11 ITRSADSGASRADGEKRVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRH 69
Query: 70 VNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPW 129
V + L + V + + D V +G ++V A G + + +N++ +D TCP
Sbjct: 70 VVETLSDQGVVFV------DETDEVPEGALLVFSAHGVSPAVHESAAARNLRTIDATCPL 123
Query: 130 VSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGEL 189
V+KV ++ + D+ ++ G HEE TA A ++ + +
Sbjct: 124 VTKVHQEAKRFARDDFDILLIGHEGHEEVEGTAGEAPDHVQL-----------------V 166
Query: 190 NGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFG 249
+G S + D KV +QTT+ ET +
Sbjct: 167 DGPDSVDAVTVR--------------DESKVIWLSQTTLSVDETMQT------------- 199
Query: 250 VENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSE 304
V + E F S + IC ATQ RQ A+ M E DL++VV R + E
Sbjct: 200 VARLRERFPSLQDPPSDDICYATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVE 255
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+G G K +Y + + V+ WL G T+GITSGAS P+ V V+
Sbjct: 256 VALGAGAKASYLVDYAREVDPA-WL-DGVRTVGITSGASVPEILVRGVI 302
>gi|73538723|ref|YP_299090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
gi|72122060|gb|AAZ64246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
Length = 323
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 143/350 (40%), Gaps = 83/350 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A + +++ +EI+HN V + L+ + +
Sbjct: 1 MQVILAQPRGFCAGVVRAIEIVDRALVKH-GAPVFVRHEIVHNKHVVEGLKNKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G + + + + +D TCP V KV ++
Sbjct: 58 ----EELDEVPAGAVTIFSAHGVSRAVVADAGQRQLHAIDATCPLVIKVHNQGRQYAASG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK I+V+N E E L+ + T A++
Sbjct: 114 RTVILIGHAGHPEVEGTMGQIPGKVILVQNEAEVE---------RLDLPADTPVAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
QTT+ +T I + R+F + + +T
Sbjct: 162 --------------------TQTTLSVDDTRNI----IAALARRF------SNMVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ + + D+ILV+ EI + G+PSY I + P
Sbjct: 192 DICYATQNRQSAVRDLC-KVADVILVIGATNSSNSNRLREIGTESGVPSYLIADGSELDP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ I +GIT+GAS P++ VEDV+ + +
Sbjct: 251 A-----------------WVTGANI-VGITAGASAPEEMVEDVINALRHL 282
>gi|406908733|gb|EKD49163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [uncultured
bacterium]
Length = 279
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 151/329 (45%), Gaps = 57/329 (17%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +++ GFC+GV RAV+ A EA ++ E ++++ +II+N V + L+ ++ +
Sbjct: 1 MKISVSKEIGFCFGVARAVKTAIEASNKY-EGRVYMLGDIINNEIVIEMLKGKGIKKV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + + GD+ ++ A G + KN+ I+D TCP V K+ +V +
Sbjct: 58 ----DRLEDIPNGDIFLVRAHGVPPDTFKMAKKKNLVIIDATCPMVQKIHGAVVSFDRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G H+E + A II+ + K AE
Sbjct: 114 YRVVIVGDRGHDEVIGIAGEVESPIIISDKKSAE-------------------------- 147
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KA +G K+GI +Q+T + + EI +++K + ++ NT+C
Sbjct: 148 KARVEGM-------KLGIVSQSTQYERDVSEIVDILKKKA----------DEAVASNTVC 190
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
++T+ RQ ++ +E D+++V+ + SE+ P K+ L EL
Sbjct: 191 NSTKTRQREAARLSKEN-DVMIVIGSKRSANTGRLKMISEEN-NPKTKMV--LTKDEL-- 244
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVL 353
W + ++G+T+GAST + V+DV+
Sbjct: 245 DPIWFEDAE-SVGVTAGASTRIEEVDDVV 272
>gi|271969671|ref|YP_003343867.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Streptosporangium roseum DSM 43021]
gi|270512846|gb|ACZ91124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Streptosporangium roseum DSM 43021]
Length = 322
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 152/354 (42%), Gaps = 88/354 (24%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T +V +A+ G+C GV+RAVQ +A +Q+ I++ +I+HN V + LEE
Sbjct: 5 TPATRRVLVAKPRGYCAGVDRAVQAVEKALEQY-GAPIYVRKQIVHNTHVVRTLEERGA- 62
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I VEE ++ V +G +VV A G + ++++ +D TCP V+KV ++
Sbjct: 63 -IFVEETEE----VPEGAIVVFSAHGVSPVVHQEAARRSLRTIDATCPLVTKVHNEAKRF 117
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
DY ++ G HEE TA A +I + ++G S
Sbjct: 118 ASQDYDILLIGHEGHEEVEGTAGEAPDHIQL-----------------VDGLDSV----- 155
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
A + DP ++ +QTT+ ET E V + E F +
Sbjct: 156 -----AAVQVKDPS----RLVWLSQTTLSVDETVET-------------VSRLKERFPNL 193
Query: 261 -----NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWID 302
+ IC ATQ RQ A+ K + + L++V VE+A D G SY +D
Sbjct: 194 IDPPSDDICYATQNRQVAV-KEIAAQAQLVIVVGSENSSNSKRLVEVAVDHGADASYLVD 252
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I K+ WL G T+G+TSGAS PD+ V +VL ++
Sbjct: 253 DASLI-----------------KDEWL-DGVTTVGVTSGASVPDELVSEVLARL 288
>gi|300024397|ref|YP_003757008.1| hydroxymethylbutenyl pyrophosphate reductase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526218|gb|ADJ24687.1| hydroxymethylbutenyl pyrophosphate reductase [Hyphomicrobium
denitrificans ATCC 51888]
Length = 325
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 152/341 (44%), Gaps = 64/341 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+QI +A +F +++ +EI+HN V L +
Sbjct: 8 LKILLAAPRGFCAGVDRAIQIVEQALTKF-GAPVYVRHEIVHNRYVVDSLRAKGAVFV-- 64
Query: 85 EEGKKQFD-VVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
K+ D + + V+ A G A N+N+ +VD TCP VSKV +H +
Sbjct: 65 ----KELDEIPDTTQPVIFSAHGVAKAIPEKAKNRNMFVVDATCPLVSKVHMEAARHHEQ 120
Query: 144 DYTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
I+ G H E V T AG +V+++++A
Sbjct: 121 GREIILVGHNGHPEVVGTLGQLPAGAIHLVESVEDA------------------------ 156
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ F P D K+ QTT+ +T EI ++++ G V E
Sbjct: 157 -------RTFTPR-DASKLAYVTQTTLSLDDTAEIVAVLKERFPEIGG--PVKE------ 200
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
IC AT RQ+A+ K++ K+D +LV+ G P +S + + K K +
Sbjct: 201 DICYATTNRQNAV-KVIAPKIDGLLVI------GGPKSS-NSLRLVEVAAKSGCKFSY-- 250
Query: 322 LVEKENWLPKGQI----TIGITSGASTPDKAVEDVLKKVFE 358
LVE+ +P G + TIGIT+GAS P+ VE+V++ + E
Sbjct: 251 LVERAKDIPWGDLEHAHTIGITAGASAPEVIVEEVIEAIRE 291
>gi|156973302|ref|YP_001444209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
ATCC BAA-1116]
gi|156524896|gb|ABU69982.1| hypothetical protein VIBHAR_00983 [Vibrio harveyi ATCC BAA-1116]
Length = 321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 72/353 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 62 EE----LHEVPDDNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y +E Y++ A +EK K
Sbjct: 118 MEVVLIGHAGHPEVEGTM---GQY-------SSETGGMYLV---------ETPADVEKLK 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V DP DL V +QTT+ ET ++ + + + G + IC
Sbjct: 159 SIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPEIQGPRK--------DDIC 203
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ + VD+++VV E+AE G P Y D + I P
Sbjct: 204 YATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP--- 259
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
W +G++ +G+T+GAS P++ V +L ++ E+ EA+
Sbjct: 260 --------------EWF-EGKVKVGVTAGASAPEELVNQILDRIKELVGAEAV 297
>gi|429766811|ref|ZP_19299053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
celatum DSM 1785]
gi|429182957|gb|EKY24033.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
celatum DSM 1785]
Length = 281
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 148/334 (44%), Gaps = 67/334 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA++ GFC+GV+RAV A + ++++ +KI+ +IHN V LE+ + I +
Sbjct: 3 KVTLAKNAGFCFGVKRAVDEAIKTQREY-NKKIYTLGPLIHNNDVVNYLEDNDIYAIDIN 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ + +N GDV+++ + G + E L +K + +++ TCP+V+ + V K Y
Sbjct: 62 D----IENLNSGDVILIRSHGVSKEVFDLLTDKGLIVINATCPFVTNIQKKVNKFSNEGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G +H E + + IV K+ + + D
Sbjct: 118 KIVILGDKNHPEVIGINGWCNNEAIV--TKDGKIIEDL---------------------- 153
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
P+ KV + +QTT E EE + + K FNTIC
Sbjct: 154 -------PN----KVCVVSQTT----EKEENWNITINNLNNKVS------ELKQFNTICA 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT+ERQ ++ ++ + VD +++V + I N +H +E
Sbjct: 193 ATEERQSSVLEL-SKTVDFMIIVGGKNSSNTTKLY-----EIAKEN--CKNTIH---IEN 241
Query: 326 ENWLPKGQI------TIGITSGASTPDKAVEDVL 353
LP+ I TIG+T+GASTPD +++V+
Sbjct: 242 AKELPQSLIDDSSINTIGVTAGASTPDWIIKEVI 275
>gi|153834655|ref|ZP_01987322.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
HY01]
gi|148868907|gb|EDL67965.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
HY01]
Length = 321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 72/353 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 62 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y +E Y++ A +EK K
Sbjct: 118 MEVVLIGHAGHPEVEGTM---GQY-------SSETGGMYLV---------ETPADVEKLK 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V DP DL V +QTT+ ET ++ + + + G + IC
Sbjct: 159 SIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK--------DDIC 203
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ + VD+++VV E+AE G P Y D + I P
Sbjct: 204 YATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP--- 259
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
W +G++ +G+T+GAS P++ V +L ++ E+ EA+
Sbjct: 260 --------------EWF-EGKVKVGVTAGASAPEELVNQILDRIKELVGAEAV 297
>gi|378717101|ref|YP_005281990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans VH2]
gi|375751804|gb|AFA72624.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Gordonia
polyisoprenivorans VH2]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 139/346 (40%), Gaps = 88/346 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE G+C GV+RAV+ A + +++ EI+HN V L E +
Sbjct: 6 RILLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNRHVVDTLAERGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + E T +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGAIVVFSAHGVSPEVHRTAAQRNLKTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + G + + S +
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPEHI------------QLVDGPDAVDTVSVR--------- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN---- 261
D KV +QTT+ ET E V + E F N
Sbjct: 158 ----------DESKVIWLSQTTLSVDETMET-------------VRRLRERFPELNDPPS 194
Query: 262 -TICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRI 307
IC ATQ RQ A+ M K DL++V VE+A G SY +D + I
Sbjct: 195 DDICYATQNRQVAVKAMA-PKCDLVIVVGSKNSSNSVRLVEVALQNGASASYLVDYAREI 253
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
P WL G T+GITSGAS P+ V V+
Sbjct: 254 DPA-----------------WL-DGVETVGITSGASVPEVLVRGVI 281
>gi|407648402|ref|YP_006812161.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
brasiliensis ATCC 700358]
gi|407311286|gb|AFU05187.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
brasiliensis ATCC 700358]
Length = 337
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 145/341 (42%), Gaps = 62/341 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G +V LAE G+C GV+RAV+ +A + I++ EI+HN V + L E V I
Sbjct: 24 GGKRVLLAEPRGYCAGVDRAVETVEKALDKH-GAPIYVRKEIVHNRHVVETLRERGV--I 80
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G +VV A G + + +N+ +D TCP V+KV ++ +
Sbjct: 81 FVDE----TDEVPEGALVVFSAHGVSPAVHESAAARNLHTIDATCPLVTKVHQEAKRFAR 136
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A ++I + ++G S +
Sbjct: 137 DDYDILLIGHEGHEEVEGTAGEAPEHIQL-----------------VDGPDSVDNVTVR- 178
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
D KV +QTT+ ET E V + E F +
Sbjct: 179 -------------DESKVIWLSQTTLSVDETMET-------------VRRLRERFPTLQD 212
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ M E DL++VV S + E + G K AY +
Sbjct: 213 PPSDDICYATSNRQTAVKAMAPE-CDLVIVV--GSKNSSNSVRL-VEVALNAGAKAAYLV 268
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ WL G TIGITSGAS PD V VL + E
Sbjct: 269 DFAREVDTA-WL-AGVQTIGITSGASVPDILVRGVLDMLEE 307
>gi|300114035|ref|YP_003760610.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
watsonii C-113]
gi|299539972|gb|ADJ28289.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
watsonii C-113]
Length = 320
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 150/344 (43%), Gaps = 55/344 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RA+ I A + + I++ +EI+HN V + L+ V I
Sbjct: 1 MKVTLAQPRGFCAGVVRAIDIVEHALEIY-GAPIYVLHEIVHNQHVVEDLQRRGV--IFT 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK-HKKG 143
E+ + G V + A G + + T ++Q++D TCP V+KV +K +++G
Sbjct: 58 ED----LASIPTGSVTIFSAHGVSTAVVETAKKNDLQVIDATCPLVTKVHLQAKKYYRQG 113
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
D II G H E T +K YV D + A +EK
Sbjct: 114 DELIII-GHAGHPEVEGTRG---------RVKGTVYVLDSV-------------AEVEKL 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DP+ + QTT+ +T ++ ++K + G + I
Sbjct: 151 TVK-----DPE----HIAYVTQTTLSIDDTRDVVDALKKRFPKIHGP--------GLDDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ+A+ +M +E VD++LVV S + + G N I L+
Sbjct: 194 CYATQNRQNAVREMSKE-VDILLVVGARN-----SSNSNRLREAGEQNGITAHLIQDAKD 247
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+W Q +GIT+GASTP+ V+ VL ++ EE L
Sbjct: 248 LDSSWFTP-QSRVGITAGASTPEILVQGVLNELRNYGVEEVRDL 290
>gi|417851759|ref|ZP_12497446.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338218608|gb|EGP04366.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 76/356 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E+ + I++ +E++HN V L E I V
Sbjct: 1 MKIILANPRGFCAGVDRAISIV-ESALEIHGSPIYVRHEVVHNRFVVNGLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LHEVPDGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVEGT---MGQY-------------DNPEGGIF---------LVESVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + DL QTT+ +T E+ +E + ++ + N IC
Sbjct: 149 DIAKLGLRQEDDLT---FMTQTTLSIDDTSEV---IEALKQKYPAIQGPRK-----NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ ++ DL++VV E+A G+ S ID I P
Sbjct: 198 YATTNRQQAVRELAQQS-DLVIVVGSKNSSNSNRLAELASRMGVVSKLIDDTNDIDP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE--IKREEALQ 366
+WL + TIGIT+GAS P+ V+ V+K++ E + R E LQ
Sbjct: 254 --------------SWL-ENVTTIGITAGASAPEVLVQSVVKRLQELGVTRVEELQ 294
>gi|421254563|ref|ZP_15709377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421264431|ref|ZP_15715412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064383|ref|ZP_18467508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida X73]
gi|425066539|ref|ZP_18469659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida P1059]
gi|401688193|gb|EJS83835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401692165|gb|EJS86767.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404381133|gb|EJZ77616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida X73]
gi|404381327|gb|EJZ77804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida P1059]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 76/356 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E+ + I++ +E++HN V L E I V
Sbjct: 1 MKIILANPRGFCAGVDRAISIV-ESALEIHGSPIYVRHEVVHNRFVVNGLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LHEVPDGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVEGT---MGQY-------------DNPEGGIF---------LVESVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + DL QTT+ +T E+ +E + ++ + N IC
Sbjct: 149 DIAKLGLRQEDDLT---FMTQTTLSIDDTSEV---IEALKQKYPAIQGPRK-----NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ ++ DL++VV E+A G+ S ID I P
Sbjct: 198 YATTNRQQAVRELAQQS-DLVIVVGSKNSSNSNRLAELASRMGVVSKLIDDANDIDP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE--IKREEALQ 366
+WL + TIGIT+GAS P+ V+ V+K++ E + R E LQ
Sbjct: 254 --------------SWL-ENVTTIGITAGASAPEVLVQSVVKRLQELGVTRVEELQ 294
>gi|330465790|ref|YP_004403533.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Verrucosispora
maris AB-18-032]
gi|328808761|gb|AEB42933.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Verrucosispora
maris AB-18-032]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 62/335 (18%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ G+C GV+RAVQ EA K + I++ +I+HN V + LE A I VEE +
Sbjct: 3 LAKPRGYCAGVDRAVQTVEEALKLY-GAPIYVRKQIVHNKHVVRTLE--AKGAIFVEENE 59
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ V +G V+ A G A E ++++ +D TCP V+KV ++ DY +
Sbjct: 60 E----VPEGATVIFSAHGVAPEVYEQAKERSLKAIDATCPLVTKVHQEAKRFAAEDYDIL 115
Query: 149 IHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G HEE + TA A ++I +V ++A+ +
Sbjct: 116 LIGHEGHEEVIGTAGEAPEHIQLVDGPEDADRITVR------------------------ 151
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
DP+ KV +QTT+ ET E + +L ++ M + + IC A
Sbjct: 152 ----DPN----KVVWLSQTTLSVDETMETVARLKKRLPMLQSP---------PSDDICYA 194
Query: 267 TQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
T RQ + ++ E D+++VV + + +D+ R G A+++
Sbjct: 195 TSNRQHVVKEIAAE-CDVVIVVGSRNSSNSVRLVEVALDAGARAGHLVDFAHEI------ 247
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL Q T+G+TSGAS PD+ V++VL + E
Sbjct: 248 -DDAWLVGAQ-TVGLTSGASVPDELVQEVLTHLAE 280
>gi|302036229|ref|YP_003796551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Nitrospira defluvii]
gi|300604293|emb|CBK40625.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Nitrospira defluvii]
Length = 320
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 147/342 (42%), Gaps = 79/342 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I + K++ I++ +EI+H+ V L + V
Sbjct: 1 MKIYLANPRGFCAGVDRAIDIVDLSLKKY-GAPIYVRHEIVHSRHVVNSLRHKGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + V +G VV+ A G A ++ + ++D TCP V KV V +
Sbjct: 58 EE----LNEVPEGSVVIFSAHGVAKSVWEEAQSRRLHVIDATCPLVIKVHNEVNRDYTQG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y I+ G H E + T K+ +V ++++ E + +EK
Sbjct: 114 YELILIGHAGHPEVIGTLGQIPDKFHLVSSVRDVESL------------------HVEKT 155
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ + QTT+ +E +VE R ++ ++ I
Sbjct: 156 Q--------------NLSYVTQTTL---SVDECRDIVEALHRRFPNIKGPHQ-----EDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ+A+ K + + VD+ILV+ E+ E GIPSY ID+ I P
Sbjct: 194 CYATQNRQNAV-KSLSKLVDVILVIGSPNSSNSNRLRELGEHCGIPSYLIDAASDINP-- 250
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+WL K ++G+++GAS P+ V +V+
Sbjct: 251 ---------------DWL-KDAKSVGLSAGASAPEVLVTEVV 276
>gi|269795925|ref|YP_003315380.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sanguibacter
keddieii DSM 10542]
gi|269098110|gb|ACZ22546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sanguibacter
keddieii DSM 10542]
Length = 353
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 147/351 (41%), Gaps = 88/351 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV IA E I++ EI+HN V + L + I V+
Sbjct: 22 RVLLAAPRGYCAGVDRAV-IAVEKALALHGAPIYVRKEIVHNKYVVETLSDRGA--IFVD 78
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G VV A G + + +++Q +D TCP V+KV + DY
Sbjct: 79 E----TDEVPEGARVVFSAHGVSPAVVAAAEERSLQTIDATCPLVTKVHKEAVRFASEDY 134
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A +I + N ++ K
Sbjct: 135 DILLIGHDGHEEVEGTAGEAPDHIQIVNSP-------------------------DEVDK 169
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V + DPD KV +QTT+ ET E V + E F +
Sbjct: 170 VVVR--DPD----KVIWISQTTLSVDETMET-------------VRRLRERFPTLQDPPS 210
Query: 261 NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRI 307
+ IC ATQ RQ A+ K+ E DL++V VE+A + G SY +D K I
Sbjct: 211 DDICYATQNRQVAVKKLAPE-CDLVIVVGSTNSSNSVRLVEVALNAGARSSYLVDYAKEI 269
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 270 -----------------DESWF-EGVRTVGVTSGASVPEILVDEVLAYLAE 302
>gi|167567357|ref|ZP_02360273.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis EO147]
gi|167574502|ref|ZP_02367376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis C6786]
Length = 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 145/345 (42%), Gaps = 79/345 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V + L + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVERALQQH-GAPVYVRHEIVHNRHVVENLRNKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G A + + + ++D TCP V+KV ++
Sbjct: 58 ----EELDEVPHGAVAIFSAHGVAQTVEMDAEARGLDVLDATCPLVTKVHVQGRQYVAAG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T G+ I+V++ E + L + T A++
Sbjct: 114 RRLILIGHAGHPEVEGTIGQIPGEVILVQSEAEVDT---------LTLPADTPIAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ +T I + +++ G + I
Sbjct: 162 --------------------TQTTLSVDDTRGIIEALQRRFTDIVGPDT--------RDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ A+ ++ E+VD++LVV EI + G+PSY + G+
Sbjct: 194 CYATQNRQAAVREL-SEQVDVLLVVGATNSSNSNRLREIGTESGVPSYLVAD------GS 246
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+I + W G +G+T+GAS P++ VEDV+ +
Sbjct: 247 EI-----------RAEWF-AGACAVGLTAGASAPEEMVEDVIAAL 279
>gi|383317790|ref|YP_005378632.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Frateuria aurantia DSM 6220]
gi|379044894|gb|AFC86950.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Frateuria aurantia DSM 6220]
Length = 331
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 150/352 (42%), Gaps = 93/352 (26%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A + + I++ +E++HN V +L A + VEE
Sbjct: 3 ILLANPRGFCAGVDRAIVIVERALEAY-GAPIYVRHEVVHNRYVVDKLR--AQGAVFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ V V+ A G + N + +++ D TCP VSKV V + + T
Sbjct: 60 ----IEEVPDDSTVIFSAHGVSKAVREEANQRGLRVYDATCPLVSKVHMEVARLGRIGRT 115
Query: 147 SIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
++ G H E T A +AG+ ++V+++ E V D LN T +++
Sbjct: 116 VLLIGHSGHPEVDGTLGQWNAKYAGEMLLVESV---EGVAD------LNPKDPTSLSYV- 165
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
QTT+ +T+ I + + E F
Sbjct: 166 ----------------------TQTTLSVDDTKSI-------------INALRERFPEIE 190
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
+ IC ATQ RQDA+ ++ E V+++LVV E+AE G+P+Y ID
Sbjct: 191 GPRKDDICYATQNRQDAVRELAAE-VEVMLVVGSVNSSNSNRLRELAEKEGVPAYLIDGA 249
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ I + W+ + +G+T+GAS P+K V DV+ ++
Sbjct: 250 EHI-----------------QHEWVANAK-RVGVTAGASAPEKLVRDVIARL 283
>gi|359798507|ref|ZP_09301078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
arsenitoxydans SY8]
gi|359363329|gb|EHK65055.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
arsenitoxydans SY8]
Length = 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 145/353 (41%), Gaps = 81/353 (22%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA+ I A + I++ +EI+HN V + L
Sbjct: 6 TASDAEVLLAQPRGFCAGVDRAIDIVERA-IELHGAPIYVRHEIVHNRYVVEDLRAKGAI 64
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I + D G +VV A G + + +Q+ D TCP V+KV V +
Sbjct: 65 FI------DELDDAPAGSIVVFSAHGVSKAVRAEAEARGLQVFDATCPLVTKVHIEVARM 118
Query: 141 KKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ I+ G H E T A G Y++ E V D A
Sbjct: 119 RAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV-------ETVEDV--------------A 157
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
LE VS D + QTT+ + + V + + +F ++ E
Sbjct: 158 SLE-----VS-------DPANLAYVTQTTL----SVDDAAAVSQALKARF--PSIAEPKK 199
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
S IC ATQ RQDA+ M E DL+LVV E+AE +G+ S+ ID
Sbjct: 200 S--DICYATQNRQDAVKVMAPE-CDLVLVVGSPNSSNSNRLREVAERKGVASHLIDGAHS 256
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P WL G+ IG+T+GAS P+ V+ V+ +V E+
Sbjct: 257 IDPA-----------------WL-VGRKRIGVTAGASAPEILVQQVIARVKEL 291
>gi|325964034|ref|YP_004241940.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470121|gb|ADX73806.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 153/337 (45%), Gaps = 62/337 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V LEE I
Sbjct: 31 GTKKVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEQGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G +V+ A G + + + ++ ++ +D TCP V+KV + K
Sbjct: 88 FVDE----TDEVPEGALVIFSAHGVSPAVVQSAEDRGLRTIDATCPLVTKVHKEAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D+ ++ G HEE TA A ++I + +NG + +
Sbjct: 144 DDFDILLIGHDGHEEVEGTAGEAPEHIQI-----------------INGPHEVDKVTVR- 185
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DP+ KV +QTT+ ET E +L++ E F +
Sbjct: 186 ---------DPE----KVIWLSQTTLSVDETMETVRLLK-------------ERFPTLQD 219
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ K + + DL++VV A S + E + G K +Y++
Sbjct: 220 PPSDDICYATTNRQVAI-KKISPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASYRV 275
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
V+ E W +G T+G+TSGAS P+ V+DVL+
Sbjct: 276 DFANEVD-EAWF-EGVATVGVTSGASVPEVLVKDVLR 310
>gi|15603529|ref|NP_246603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378775685|ref|YP_005177928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida 36950]
gi|386835540|ref|YP_006240859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. 3480]
gi|13431628|sp|P57960.1|ISPH_PASMU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|12722070|gb|AAK03748.1| LytB [Pasteurella multocida subsp. multocida str. Pm70]
gi|356598233|gb|AET16959.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida 36950]
gi|385202245|gb|AFI47100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. 3480]
Length = 314
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 149/356 (41%), Gaps = 76/356 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E+ + I++ +E++HN V L E I V
Sbjct: 1 MKIILANPRGFCAGVDRAISIV-ESALEIHGSPIYVRHEVVHNRFVVNGLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LHEVPDGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVEGT---MGQY-------------DNPEGGIF---------LVESVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + DL QTT+ +T E+ +E + ++ + N IC
Sbjct: 149 DIAKLGLRQEDDLT---FMTQTTLSIDDTSEV---IEALKQKYPAIQGPRK-----NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ ++ DL++VV E+A G+ S ID I P
Sbjct: 198 YATTNRQQAVRELAQQS-DLVIVVGSKNSSNSNRLAELASRMGVVSKLIDDANDIDP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE--IKREEALQ 366
WL + TIGIT+GAS P+ V+ V+K++ E + R E LQ
Sbjct: 254 --------------TWL-ENVTTIGITAGASAPEVLVQSVVKRLQELGVTRVEELQ 294
>gi|237745563|ref|ZP_04576043.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes HOxBLS]
gi|229376914|gb|EEO27005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes HOxBLS]
Length = 316
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 148/343 (43%), Gaps = 81/343 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC GV+RA++ A F + +++ +EI+HN V RL+ I +
Sbjct: 1 MKLILAQPRGFCAGVKRAIETVERALALF-GKPVYVRHEIVHNTHVVNRLKNRGA--IFI 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G V++ A G + +++++ D TCP V+KV V K +K +
Sbjct: 58 EE----LDEVPSGSVLIFSAHGVSKAIRQDAERRHLRLFDATCPLVTKVHAEVAKMRKDN 113
Query: 145 YTSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
I+ G H E T S +G Y+I NG +EK
Sbjct: 114 CEIIVIGHKGHPEVEGTMGQSDSGMYLI-------------------NGIDD-----IEK 149
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K +P+ ++ +QTT+ +T EI ++K + +
Sbjct: 150 LKVE-----NPE----RLAYVSQTTLSIDDTTEIIAALKKRFPSIVEPKKAD-------- 192
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC AT RQ A+ ++ +K LILVV E+AE G +Y +D+ I P
Sbjct: 193 ICYATTNRQKAVRRLA-KKTGLILVVGSPNSSNSNRLREMAEKNGAIAYMVDNASEIDP- 250
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+WL G T+GIT+GAS P+ V +V+
Sbjct: 251 ----------------DWL-AGHDTVGITAGASAPEVLVREVV 276
>gi|315501922|ref|YP_004080809.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora sp.
L5]
gi|315408541|gb|ADU06658.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora sp.
L5]
Length = 346
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAVQ EA K + I++ +I+HN V + LE A I VE
Sbjct: 30 RVLLANPRGYCAGVDRAVQTVEEALKLY-GAPIYVRKQIVHNKHVVRTLE--AQGAIFVE 86
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G V+ A G A E ++++ +D TCP V+KV + DY
Sbjct: 87 ENEE----VPEGATVIFSAHGVAPEVYEQAKQRSLRAIDATCPLVTKVHHEARRFAAQDY 142
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A +I + ++G + +
Sbjct: 143 DILLIGHEGHEEVIGTAGEAPAHIQL-----------------VDGPDGVDKVTVR---- 181
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP+ KV +QTT+ ET E + +L ++ + + + IC
Sbjct: 182 ------DPE----KVVWLSQTTLSVDETLETVARLKKRLPLLQSP---------PSDDIC 222
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
AT RQ + ++ E D+++VV R + E + G + Y + +E
Sbjct: 223 YATSNRQHVVKEIAPE-CDVVIVV---GSRNSSNSVRLVEVALDAGARAGYLVDFAHEIE 278
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS PD+ V+ VL + E
Sbjct: 279 -DAWL-TGARTVGVTSGASVPDELVQQVLAHLAE 310
>gi|229493946|ref|ZP_04387718.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
erythropolis SK121]
gi|453067149|ref|ZP_21970438.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
qingshengii BKS 20-40]
gi|259493953|sp|C1A2V7.1|ISPH_RHOE4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226186838|dbj|BAH34942.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
erythropolis PR4]
gi|229319223|gb|EEN85072.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
erythropolis SK121]
gi|452767317|gb|EME25558.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
qingshengii BKS 20-40]
Length = 337
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 151/334 (45%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ +A ++ I++ EI+HN V + LE+ V I V+
Sbjct: 27 RVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRHVVETLEDQGV--IFVD 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G ++V A G + + +N++ +D TCP V+KV ++ + DY
Sbjct: 84 E----TDEVPEGSLLVFSAHGVSPAVHDSAAERNLRTIDATCPLVTKVHQEAKRFARDDY 139
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G S +
Sbjct: 140 DILLIGHEGHEEVEGTAGEAPDHVTI-----------------VDGPDSVDAVTVR---- 178
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D KV +QTT+ ET + + +L E+ N + IC
Sbjct: 179 ----------DESKVIWLSQTTLSVDETMQTVARLRERFP---------NLQDPPSDDIC 219
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E DL++VV R + E +G G +Y + + V+
Sbjct: 220 YATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALGAGAAASYLVDYAREVD 275
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G T+GITSGAS P+ V V++ + E
Sbjct: 276 LA-WL-EGVQTVGITSGASVPEVLVRGVIELLAE 307
>gi|34558835|gb|AAQ75179.1| hydroxymethylbutenyl pyrophosphate reductase [Alvinella pompejana
epibiont 7G3]
Length = 277
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 91/352 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA SYGFC+GV+RA+ IA + N I + P ++ + E +++
Sbjct: 1 MRIELASSYGFCYGVKRAINIAEKHE-----------NSITYGPLIHNKDEINRLKSSFG 49
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D + + D VV+ G E+ L + +I++ TCP+V+K VEK + D
Sbjct: 50 IGLAHKLDDIKEKDTVVIRTHGIPKNELKILKQQKNKIINATCPYVTKPQQIVEKMSQED 109
Query: 145 YTSIIHGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y+ II G +H E S+A +II++ KE
Sbjct: 110 YSIIIFGDKNHPEIKGVVSYAKDRDNAFIILR-----------------------KEELE 146
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E K+ KV + QTT + EI V +++ V F
Sbjct: 147 ELPLKS------------KVAVVAQTTRKPADFLEI---VNSLILKHKEVR-------VF 184
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTIC+AT E QDA + ++ D+++V+ I + SY I++EK +
Sbjct: 185 NTICNATFENQDAAEDLA-KRADIMIVIGGKHSSNTKQLHSITKKWCPDSYLIENEKEL- 242
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
K W + ++ GI++GASTPD V+DV+K + IK
Sbjct: 243 ----------------KNEWFREKKLC-GISAGASTPDWIVQDVIKHIKAIK 277
>gi|398986123|ref|ZP_10691394.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM24]
gi|399011802|ref|ZP_10714132.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM16]
gi|398117386|gb|EJM07138.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM16]
gi|398152911|gb|EJM41421.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM24]
Length = 314
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 146/345 (42%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 KAVS-KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ +PD K+ QTT+ +T + + +T G ++ I
Sbjct: 150 DVAELQVHNPD----KLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD-------I 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|398812861|ref|ZP_10571574.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Variovorax sp. CF313]
gi|398076385|gb|EJL67448.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Variovorax sp. CF313]
Length = 322
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 148/346 (42%), Gaps = 83/346 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE GFC GV+RA++I A +F I++ +EI+HN V L+ A I +E
Sbjct: 7 EVILAEPRGFCAGVDRAIEIVERAIAKF-GAPIYVRHEIVHNTYVVNELK--AKGAIFIE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
E V G +V A G AVE+ ++ +I D TCP V+KV V K K
Sbjct: 64 E----LSDVPPGATLVFSAHGVSKAVEQ--EARDRGFEIFDATCPLVTKVHVEVAKLAKE 117
Query: 144 DYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ I+ G H E T + +V+++ + V S S E
Sbjct: 118 GFEFIMIGHKGHPEVEGTMGQLSSGIHLVEDVADVAKV-----------SPSQTE----- 161
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K+ + QTT+ + EI V R V +
Sbjct: 162 ----------------KLAVVTQTTLSVDDAAEIAAAVR---TRFPAVREPKQ-----QD 197
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K++ +VDL++VV E+A+ G SY +DS + + P
Sbjct: 198 ICYATQNRQDAV-KIMSPQVDLVIVVGSPTSSNSNRLRELAQRLGTESYMVDSAEELKP- 255
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G+ IG+T+GAS P+ V +V+++V
Sbjct: 256 ----------------EWF-EGKTRIGLTAGASAPEVLVREVIERV 284
>gi|320354674|ref|YP_004196013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfobulbus
propionicus DSM 2032]
gi|320123176|gb|ADW18722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfobulbus
propionicus DSM 2032]
Length = 306
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 147/345 (42%), Gaps = 85/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
++V LA+ GFC GV RA+ I ++A ++ +++ +EI+HN V LEE+ + +
Sbjct: 1 MEVILAKPRGFCAGVNRAIAIVHQALERH-RPPVYVLHEIVHNTHV---LEELRCRGAVF 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
VEE + + +G V V A G AVE+ T ++I+D TCP VSKV + +
Sbjct: 57 VEE----LEDIPRGSVTVFSAHGVSRAVEQRAT--ALGLRIIDATCPLVSKVHRRMIRLN 110
Query: 142 KGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
Y ++ G H E T A G +V E G+L +
Sbjct: 111 AQGYDVLVIGHKGHPEVEGTCGQAVGPVHVVSKASEI---------GQLQVT-------- 153
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
DPD KVG QTT+ +T EI + + R + +
Sbjct: 154 -----------DPD----KVGYVTQTTLSVDDTREILLAIRRRFPRIAEPDRTD------ 192
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC AT RQ A+ ++ ++VDL+LVV E+AE R P++ ID I
Sbjct: 193 --ICYATTNRQAAVRELA-DRVDLVLVVGSKNSSNSNRLREVAELRQTPAHLIDDASEID 249
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
P W G +G+++GAS P+ V V+
Sbjct: 250 PA-----------------WF-AGVKRVGVSAGASAPEHLVVGVV 276
>gi|186472955|ref|YP_001860297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phymatum STM815]
gi|184195287|gb|ACC73251.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia phymatum
STM815]
Length = 314
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 79/342 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRQKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G + + + ++D TCP V+KV ++ G
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVSQSVERDAEQRGLDVLDATCPLVTKVHVQGRQYVAGG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ EAE +L T A++
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQS--EAEV-------AQLELPIDTPLAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ +T I +++ G + I
Sbjct: 162 --------------------TQTTLSVDDTRGIINALKRRFPDIVGPDT--------RDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ A+ ++ +VD++LVV EI + G+PSY + I P
Sbjct: 194 CYATQNRQAAVREL-SSQVDVLLVVGATNSSNSNRLREIGSESGVPSYLVADGSEIKP-- 250
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W T+GIT+GAS P++ VE+V+
Sbjct: 251 ---------------EWF-ANVTTVGITAGASAPEEMVENVI 276
>gi|451976211|ref|ZP_21927377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
alginolyticus E0666]
gi|451929827|gb|EMD77555.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
alginolyticus E0666]
Length = 321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 155/357 (43%), Gaps = 80/357 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + V
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--VFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + +++ + D TCP V+KV V + + +
Sbjct: 62 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKQRDLTVFDATCPLVTKVHMEVARASRRN 117
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ A +
Sbjct: 118 MEVVLIGHAGHPEVEGTMGQYASETGGMYLVET-----------------------PADV 154
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 155 EKLKSIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ ++ E VD+++VV E+AE G P Y D + I
Sbjct: 200 DDICYATQNRQDAVRELAGE-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIK 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
P W +G+ +G+T+GAS P++ V +L+++ E+ EA+
Sbjct: 259 P-----------------EWF-EGKTKVGVTAGASAPEELVNQILERIKELVGAEAV 297
>gi|336426344|ref|ZP_08606354.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336010779|gb|EGN40759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 282
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 148/331 (44%), Gaps = 60/331 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LAES GFC+GV+RAV YE + +KI+ IIHN V + LE+ VQ I
Sbjct: 1 MEVILAESAGFCFGVKRAVDKVYE--QIASGKKIYTYGPIIHNEFVVQDLEKKGVQVIES 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D + +G VV+ + G + + ++ VD TCP+V ++ VEK
Sbjct: 59 EE---ELDKLTEGTVVI-RSHGVPKSICEKIEKQGLECVDATCPFVKRIHKIVEKESAAG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I G H E + G S T A +E K
Sbjct: 115 CRIVIIGNAGHPEVEG----------------------------IQGWSLTPAAVVESEK 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+A +P L I +QTT + +E LVE + + + + VN TIC
Sbjct: 147 EAREFVAEPGKKLC---IVSQTTFNYNKFQE---LVEIFLKKGYDISVVN-------TIC 193
Query: 265 DATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
+AT+ERQ K + KVD ++V+ + R + Y I + A+ +
Sbjct: 194 NATEERQTEA-KDIAAKVDAMIVIGGKHSSNTRKL--YEICC-------RECAHTCLIQT 243
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDV 352
L + LPK +GIT+GASTP+K +E+V
Sbjct: 244 LDDLHLELPKAVRLVGITAGASTPNKLIEEV 274
>gi|57239245|ref|YP_180381.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia
ruminantium str. Welgevonden]
gi|71152181|sp|Q5HB13.1|ISPH_EHRRW RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|57161324|emb|CAH58247.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia
ruminantium str. Welgevonden]
Length = 328
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 151/345 (43%), Gaps = 84/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEIIHNPTVNKRLEEMAVQNIP 83
V+V LA GFC GV RA++I A + + + K I++ +EI+HN + + L+ M V I
Sbjct: 13 VEVILARPRGFCAGVSRAIEIVKLAIEYYKDTKTIYVLHEIVHNKYIVETLKTMGVIFI- 71
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ D G V++ A G + ++++ L ++++++D TCP V+KV V+ +
Sbjct: 72 -----DKVDQAQDGSVLIYSAHGVSKSIKQLAEL--RDLEVIDATCPLVNKVHKEVQLYD 124
Query: 142 KGDYTSIIHGKYSHEETVATA-SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K Y I+ G H E T + IIV+N+ + + +
Sbjct: 125 KSGYQVILIGHKGHREVEGTVGQISTPVIIVQNLNDIDKI-------------------- 164
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ FDPD K+ QTT+ +T K++ + +KF N
Sbjct: 165 --------EIFDPD----KLAYVTQTTLSVDDT----KVIIDKLKKKFP----NIKGPDL 204
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV---------EIAEDRGIPS--YWIDSEKRIGP 309
IC ATQ RQ K + E VD++ ++ + E GI + + IDS K I
Sbjct: 205 KDICYATQNRQTTT-KRLAELVDIVFILGSKNSSNSNRLKELAGIQTQAFLIDSYKEIDL 263
Query: 310 GNKIAYKLMHGELVEKENWLPKGQIT-IGITSGASTPDKAVEDVL 353
N L IT IGIT+GAS PD V+ V+
Sbjct: 264 -----------------NLL--NDITKIGITAGASAPDILVQQVI 289
>gi|329911399|ref|ZP_08275503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Oxalobacteraceae bacterium IMCC9480]
gi|327545924|gb|EGF31024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Oxalobacteraceae bacterium IMCC9480]
Length = 317
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 91/352 (25%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ LA+ GFC GV+RA++I A QF I++ +EI+HN V L I
Sbjct: 4 NKEILLAQPRGFCAGVDRAIEIVERALIQF-GAPIYVRHEIVHNAYVVDDLRTKGA--IF 60
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+EE V G VV A G + + + ++I D TCP V+KV VEK ++
Sbjct: 61 IEE----LADVPTGQTVVFSAHGVSKAVKIEAEERGLRIFDATCPLVTKVHVEVEKMRRD 116
Query: 144 DYTSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
I+ G H E T S G Y++ ++ A L+
Sbjct: 117 GREIIMIGHDGHPEVEGTMGQSEQGMYLV---------------------ETTDDVARLQ 155
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
+ PD+ + +QTT+ +T +I + + + F
Sbjct: 156 VAR--------PDL----LAYVSQTTLSVDDTADI-------------IAALKQRFPDIA 190
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC AT RQ+A+ K + +V+L++VV E+AE +G+PS+ +D+
Sbjct: 191 EPKKGDICYATTNRQEAV-KFMAPQVELVIVVGSPNSSNSNRLREVAEKKGVPSFMVDNA 249
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++I P WL +G+ IG+T+GAS P+ V+ V+ ++
Sbjct: 250 EQIEPA-----------------WL-EGKQRIGVTAGASAPEVLVQAVIDRL 283
>gi|383759385|ref|YP_005438370.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrivivax
gelatinosus IL144]
gi|381380054|dbj|BAL96871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Rubrivivax
gelatinosus IL144]
Length = 321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 147/344 (42%), Gaps = 80/344 (23%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LAE GFC GV+RA++I A +F I++ +EI+HN V L A I +EE
Sbjct: 9 LAEPRGFCAGVDRAIEIVERALAKF-GAPIYVRHEIVHNTYVVNDLR--AKGAIFIEELA 65
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ V +G +V A G + + ++ D TCP V+KV V K + Y I
Sbjct: 66 E----VPRGATLVFSAHGVSQAVREEAERRGFKVFDATCPLVTKVHVEVAKLAREGYEFI 121
Query: 149 IHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G H E T + I +V++ ++ ++V
Sbjct: 122 MIGHKGHPEVEGTMGQLSEGIYLVEDAEDVQHV--------------------------- 154
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
P D K+ + QTT+ + EI V++ +V E IC AT
Sbjct: 155 ----QPRGD--KLAVVTQTTLSVDDAAEILAAVKQRF------PHVREP--KKQDICYAT 200
Query: 268 QERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAY 315
Q RQDA+ K++ VD+++VV E+AE G P++ +DS + P
Sbjct: 201 QNRQDAV-KVMAPAVDVVIVVGSPTSSNSNRLRELAERLGTPAHMVDSADDLLP------ 253
Query: 316 KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W +G+ +G+T+GAS PD V+ V+ ++ E+
Sbjct: 254 -----------EWF-EGRRRVGLTAGASAPDILVQQVIARLREL 285
>gi|383311776|ref|YP_005364586.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. HN06]
gi|380873048|gb|AFF25415.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. HN06]
Length = 314
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 149/356 (41%), Gaps = 76/356 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E+ + I++ +E++HN V L E I V
Sbjct: 1 MKIILANPRGFCAGVDRAISIV-ESALEIHGSPIYVRHEVVHNRFVVNGLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LHEVPDGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVEGT---MGQY-------------DNPEGGIF---------LVESVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + DL QTT+ +T E+ +E + ++ + N IC
Sbjct: 149 DIAKLGLRQEDDLT---FMTQTTLSIDDTSEV---IEALKQKYPAIQGPRK-----NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ ++ DL++VV E+A G+ S ID I P
Sbjct: 198 YATTNRQQAVRELAQQS-DLVIVVGSKNSSNSNRLAELASRMGVVSKLIDDANDIDP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE--IKREEALQ 366
WL + TIGIT+GAS P+ V+ V+K++ E + R E LQ
Sbjct: 254 --------------TWL-ENVTTIGITAGASAPEVLVQSVVKRLQELGVTRVEELQ 294
>gi|284043298|ref|YP_003393638.1| hydroxymethylbutenyl pyrophosphate reductase [Conexibacter woesei
DSM 14684]
gi|283947519|gb|ADB50263.1| hydroxymethylbutenyl pyrophosphate reductase [Conexibacter woesei
DSM 14684]
Length = 319
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 141/341 (41%), Gaps = 79/341 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA G+C GV+RAVQ A F +++ EI+HN V ++L I VE
Sbjct: 7 KILLASPRGYCAGVDRAVQTVERA-LDFHGAPVYVRKEIVHNKHVVEQLRSRGA--IFVE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ + V +G VV A G A + + +D TCP V+KV + DY
Sbjct: 64 DETE----VPEGSTVVFSAHGVAPSVHENSAKRGLNTIDATCPLVTKVHREAVRFAADDY 119
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
T ++ G HEE T A +I+ + E E D + G
Sbjct: 120 TIVLIGHAGHEEVEGTMGEAPDHIV---LVETEDDVDALEIG------------------ 158
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTIC 264
DPD +V +QTT+ ET I +L EK N+ + IC
Sbjct: 159 ------DPD----RVAYISQTTLSVDETRAIIARLREK-------FPNITGP--RTDDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ K + DL+LV V++ + G SY ID E ++
Sbjct: 200 YATTNRQLAV-KQLARACDLVLVIGSQNSSNSQRLVDVTRELGTDSYLIDHEGQV----- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
E WL +G+ +GITSGAS P++ V+ ++
Sbjct: 254 ------------DETWL-EGRRVVGITSGASAPEELVQRLV 281
>gi|399017937|ref|ZP_10720126.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. CF444]
gi|398102704|gb|EJL92884.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. CF444]
Length = 320
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 150/347 (43%), Gaps = 81/347 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA+ GFC GV+RA++I A QF I++ +EI+HN V L I +E
Sbjct: 7 EILLAQPRGFCAGVDRAIEIVERALTQF-GAPIYVRHEIVHNAYVVADLRSKGA--IFIE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E V G+ V+ A G + + + + D TCP V+KV V K ++
Sbjct: 64 E----LADVPAGNTVIFSAHGVSKAVQAEALERGLAVFDATCPLVTKVHMEVAKMRREGR 119
Query: 146 TSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T + AG Y++ E +
Sbjct: 120 EIIMIGHEGHPEVEGTMGQTEAGMYLV--------------------------ETVDDVM 153
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K AV+ DPD+ + +QTT+ +T +I + KF N+ E I
Sbjct: 154 KLAVT---DPDL----LAYVSQTTLSVDDTTDI----IAALKSKF--PNIAEP--KKGDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT RQ+A+ K + +VD+++VV E+AE +G+P+Y +D+ I
Sbjct: 199 CYATTNRQEAV-KFMAPQVDVVIVVGSPNSSNSNRLREVAEKKGVPAYMVDNADLI---- 253
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+WL G+ IG+T+GAS P+ V+ V+ ++ E
Sbjct: 254 -------------NADWL-VGKKRIGVTAGASAPEVLVQAVIDRLKE 286
>gi|397688389|ref|YP_006525708.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
stutzeri DSM 10701]
gi|395809945|gb|AFN79350.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
stutzeri DSM 10701]
Length = 314
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 145/351 (41%), Gaps = 83/351 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L E I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D V G +V+ A G + + + + +++ D TCP V+KV V K+ +
Sbjct: 58 DE----LDQVPDGFIVIFSAHGVSQAVRMEADKRGLKVFDATCPLVTKVHLEVTKYSREG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y D GG + + + +
Sbjct: 114 RECILIGHHGHPEVEGT---MGQY-------------DTANGGSIYLVEDEDDVAQLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
S F QTT+ +T + ++ + F S
Sbjct: 158 NPESLAF-----------VTQTTLSMDDTSRV-------------IDALRTRFPSIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ E D++LVV E+AE P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLAGE-CDVVLVVGSPNSSNSNRLRELAERMDTPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
K W + IGIT+GAS P+ V V+ ++ E
Sbjct: 253 -----------------KREWFAEDS-RIGITAGASAPEVLVRGVIDQLRE 285
>gi|220913293|ref|YP_002488602.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
chlorophenolicus A6]
gi|219860171|gb|ACL40513.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrobacter
chlorophenolicus A6]
Length = 359
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 62/341 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V LEE +
Sbjct: 31 GAKKVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEKGAVFV 89
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V +G +V+ A G + + + + ++ +D TCP V+KV + K
Sbjct: 90 ------DETDEVPEGALVIFSAHGVSPAVVESAGQRGLRTIDATCPLVTKVHKEAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D+ ++ G HEE TA A +I + +NG + +
Sbjct: 144 DDFDILLIGHDGHEEVEGTAGEAPDHIQI-----------------INGPHEVDKVTVR- 185
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DP+ KV +QTT+ ET E +L++ E F +
Sbjct: 186 ---------DPE----KVIWLSQTTLSVDETMETVRLLK-------------ERFPTLQD 219
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ K + + DL++VV A S + E + G K +Y++
Sbjct: 220 PPSDDICYATTNRQVAI-KKISPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASYRV 275
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E W +G T+G+TSGAS P+ V+DVL+ + E
Sbjct: 276 DFANQVD-EAWF-EGVATVGVTSGASVPEVLVQDVLRLLAE 314
>gi|400406449|ref|YP_006589197.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[secondary endosymbiont of Heteropsylla cubana]
gi|400364702|gb|AFP85769.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[secondary endosymbiont of Heteropsylla cubana]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 74/353 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A K + I++ +EI+HN V L + V I
Sbjct: 3 ILLANPRGFCAGVKRAISIVESALKIY-RAPIYVYHEIVHNRYVVNMLCQQGVIFI---- 57
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ + V +G V++ A G + NN+N+ I D TCP V+KV V + +
Sbjct: 58 --ENINKVPEGSVLIFSAHGVSQSVRKEANNRNLTIFDATCPLVNKVHMEVIRASREGRE 115
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I+ G H E T G+Y N+ Y+ + S K+ + K K+
Sbjct: 116 AILIGHNGHPEVKGT---MGQY---NNLSAGIYLVE-----------SEKDVWELKVKR- 157
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
VD K+ QTT+ ++ I + G N IC A
Sbjct: 158 --------VD--KLSFMLQTTLSLDDSAIIVDALRLRFPSIIGPRKEN--------ICYA 199
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T+ RQ+A+ +++ K D++LVV E+ + G P+Y ID I
Sbjct: 200 TRNRQEAV-RILAAKSDVVLVVGSKNSSNSNRLTELVKRSGKPAYLIDRADDI------- 251
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+ +W K + IG+T+GAS PD VE V+ ++ + +E ++L
Sbjct: 252 ----------QSSWFYKKE-NIGVTAGASAPDILVEHVITRLRLLGAQEPIEL 293
>gi|269962532|ref|ZP_06176880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
1DA3]
gi|269832727|gb|EEZ86838.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
1DA3]
Length = 321
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 156/360 (43%), Gaps = 86/360 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 62 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y SS T +L
Sbjct: 118 MEVVLIGHAGHPEVEGTM---GQY-----------------------SSDTGGMYLVETP 151
Query: 201 ---EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 152 ADVEKLKAIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK----- 199
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ + VD+++VV E+AE G P Y D +
Sbjct: 200 ---DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPE 255
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
I P W +G++ +G+T+GAS P++ V +L ++ E+ EA+
Sbjct: 256 DIMP-----------------EWF-EGKVKVGVTAGASAPEELVNQILDRIKELVGAEAV 297
>gi|433643574|ref|YP_007289333.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070008]
gi|432160122|emb|CCK57441.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070008]
Length = 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 135/352 (38%), Gaps = 85/352 (24%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G V V LA FC GVERA++ E +++ +I+HN V L + +
Sbjct: 16 GEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA--V 72
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 73 FVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAA 132
Query: 143 GDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T + G HEET T A + ++V+ + LN T+ ++L
Sbjct: 133 RGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLSYL- 182
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ ET ++ ++ + F +
Sbjct: 183 ----------------------TQTTLALDETADV-------------IDALRARFPTLG 207
Query: 262 T-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSE 304
IC AT RQ A+ MV E D++LV VE+A+ G P+Y ID
Sbjct: 208 QPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLIDGP 266
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I P WL TIG+T+GAS P + V V+ +
Sbjct: 267 DDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 300
>gi|444305206|ref|ZP_21140991.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. SJCon]
gi|443482427|gb|ELT45337.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. SJCon]
Length = 358
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 152/342 (44%), Gaps = 62/342 (18%)
Query: 22 WGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
G KV LA G+C GV+RAV IA E + +++ +I+HN V LEE
Sbjct: 29 LGTKKVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEKGAIF 87
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ + D V +G +V+ A G + + + + ++ +D TCP V+KV +
Sbjct: 88 V------DETDEVPEGALVIFSAHGVSPAVVESAEERGLRTIDATCPLVTKVHKEAVRFA 141
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
K D+ ++ G HEE TA A ++I + +NG + +
Sbjct: 142 KDDFDILLIGHDGHEEVEGTAGEAPEHIQI-----------------INGPHEVDKVTVR 184
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
DP+ KV +QTT+ ET E +L++ E F +
Sbjct: 185 ----------DPE----KVIWLSQTTLSVDETMETVRLLK-------------ERFPTLQ 217
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+ IC AT RQ A+ K + + DL++VV A S + E + G K +Y+
Sbjct: 218 DPPSDDICYATTNRQVAI-KKISPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASYR 273
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ V+ E W +G T+G+TSGAS P+ V+DVL+ + E
Sbjct: 274 VDFANEVD-EAWF-EGVATVGVTSGASVPEVLVQDVLRLLAE 313
>gi|424047856|ref|ZP_17785412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-03]
gi|408883166|gb|EKM21953.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-03]
Length = 317
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 156/360 (43%), Gaps = 86/360 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 58 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y SS T +L
Sbjct: 114 MEVVLIGHAGHPEVEGTM---GQY-----------------------SSDTGGMYLVETP 147
Query: 201 ---EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 148 ADVEKLKAIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK----- 195
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ + VD+++VV E+AE G P Y D +
Sbjct: 196 ---DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPE 251
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
I P W +G++ +G+T+GAS P++ V +L ++ E+ EA+
Sbjct: 252 DIMP-----------------EWF-EGKVKVGVTAGASAPEELVNQILDRIKELVGAEAV 293
>gi|237809687|ref|YP_002894127.1| hydroxymethylbutenyl pyrophosphate reductase [Tolumonas auensis DSM
9187]
gi|259493954|sp|C4LD10.1|ISPH_TOLAT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|237501948|gb|ACQ94541.1| hydroxymethylbutenyl pyrophosphate reductase [Tolumonas auensis DSM
9187]
Length = 310
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 148/352 (42%), Gaps = 84/352 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A +F +++ +E++HN V L+ M I V
Sbjct: 1 MKILLANPRGFCAGVDRAITIVKNALHKF-GAPVYVRHEVVHNKYVVDELKAMGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D + G+ V+ A G + +Q+ D TCP V+KV V + +
Sbjct: 58 DE----LDEIPDGNTVIFSAHGVPKRVREEARKRGLQVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y + NG T +E
Sbjct: 114 QEVVLIGHKGHPEVEGT---LGQY-------------------DENG---TGMYLVEDAN 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+ S P KV QTT+ ET +I ++ + EHF +
Sbjct: 149 QVDSL---PVQQPEKVSFVTQTTLSVDETRDI-------------IDALREHFPAIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ + + +VD++LVV E+AE G +Y +D ++
Sbjct: 193 KDDICYATQNRQDAV-RALAPQVDVMLVVGSKNSSNSNRLRELAERLGTRAYLLDDASQL 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
++ W ++G+T+GAS P+ V+ V+ +++++
Sbjct: 252 -----------------QDEWFTNVN-SVGVTAGASAPEVLVQSVIDRLYQL 285
>gi|159036480|ref|YP_001535733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinispora
arenicola CNS-205]
gi|157915315|gb|ABV96742.1| hydroxymethylbutenyl pyrophosphate reductase [Salinispora arenicola
CNS-205]
Length = 328
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 152/336 (45%), Gaps = 62/336 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+ +V LA+ G+C GV+RAVQ EA K + I++ +I+HN V + LE A I
Sbjct: 10 GSKRVLLAKPRGYCAGVDRAVQTVEEALKLY-GAPIYVRKQIVHNRHVVRTLE--AKGAI 66
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE ++ V +G VV A G A E ++++ +D TCP V+KV ++
Sbjct: 67 FVEENEE----VPEGATVVFSAHGVAPEVHEQARARSLKSIDATCPLVTKVHQEAKRFAA 122
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
DY ++ G HEE V T+ A ++I +V ++A+ V
Sbjct: 123 QDYDILLIGHEGHEEVVGTSGEAPEHIQLVDGPEDADQVTVR------------------ 164
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISF 260
DPD KV +QTT+ ET E + +L ++ + +
Sbjct: 165 ----------DPD----KVVWLSQTTLSVDETLETVARLKKRLPLLQSP---------PS 201
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRG---IPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ + K + D+++VV + +D+ R G A ++
Sbjct: 202 DDICYATSNRQH-VVKQIAPDCDVMIVVGSTNSSNSVRLVEVALDAGARAGHLVDFAREI 260
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ WL G T+G+TSGAS P++ V++VL
Sbjct: 261 -------DDAWL-DGARTVGLTSGASVPEELVQEVL 288
>gi|403527999|ref|YP_006662886.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. Rue61a]
gi|403230426|gb|AFR29848.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Arthrobacter sp. Rue61a]
Length = 361
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 52/332 (15%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V LEE I
Sbjct: 31 GPKKVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEQGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE D V +G +V+ A G + + + ++ ++ +D TCP V+KV + K
Sbjct: 88 FVEE----TDEVPEGALVIFSAHGVSPAVVQSAEDRGLRTIDATCPLVTKVHKEAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A ++I + +NG
Sbjct: 144 EDYDILLIGHEGHEEVEGTAGEAPEHIQI-----------------INGPH--------- 177
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+VD V V +T L T + + +E + K + + +
Sbjct: 178 -----------EVDKVTVRDPEKTIWLSQTTLSVDETMETVRLLKDRFPTLQDP--PSDD 224
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQ A+ K + + DL++VV A S + E + G K +Y++
Sbjct: 225 ICYATTNRQVAI-KKIAPQADLVIVVGSANSSN--SVRL-VEVALEYGAKSSYRVDFANE 280
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
V+ E+W +G T+G+TSGAS P+ V+DVL+
Sbjct: 281 VD-ESWF-EGVATVGVTSGASVPEVLVKDVLR 310
>gi|344341585|ref|ZP_08772503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiocapsa
marina 5811]
gi|343798517|gb|EGV16473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiocapsa
marina 5811]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 144/349 (41%), Gaps = 84/349 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + LA GFC GV+RA++I + + +++ +E++HN V L+E + V
Sbjct: 1 MNILLANPRGFCAGVDRAIEIVDRVLELY-GAPVYVRHEVVHNRFVVDGLKERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G ++ A G A E +N+++ D TCP V+KV V +H K
Sbjct: 58 EE----VDEVPDGATLIFSAHGVAQEVRRAAEGRNLRVFDATCPLVTKVHLEVARHCKNG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T + + D GG ++ S + + K
Sbjct: 114 IEVILIGHAGHPEVEGTM--------------GQCLSD---GGAMHLVESVADVAGLEIK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DP +V QTT+ +T I ++ + E F
Sbjct: 157 -------DPS----RVAYVTQTTLSVDDTSGI-------------IDALRERFPEIQGPK 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ + + DL+LVV E+AE +G +Y ID + I
Sbjct: 193 KSDICYATQNRQDAVRDLA-ARCDLLLVVGSANSSNSNRLRELAEKQGCTAYLIDGPEDI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +WL +G+T+GAS P+ VE V+ ++
Sbjct: 252 -----------------RRDWLSAAP-RVGLTAGASAPEVLVEQVIAQL 282
>gi|405983426|ref|ZP_11041732.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia
piriformis YIT 12062]
gi|404389032|gb|EJZ84113.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia
piriformis YIT 12062]
Length = 275
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 145/343 (42%), Gaps = 86/343 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV A+ G C+GVERA+ +A A E+ + +IHNP V + L E V
Sbjct: 1 MKVIRAKHAGVCYGVERALDMAVAA--MMDEDNTYTLGPLIHNPKVVEELRERGV----- 53
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + D + +G +VV+ + G + + L K + ++D TCP V+K S + +
Sbjct: 54 -EVAESVDDLEEG-IVVIRSHGVEPQVLSALREKGLTVIDATCPHVAKAQRSAGELRNAG 111
Query: 145 YTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G+ H E AG + ++V + E
Sbjct: 112 GTVIVIGRSEHPEVKGLCGHAGPRAVVVADASEL-------------------------- 145
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
PD VGI QTT K E++ +VE R F E NTI
Sbjct: 146 ---------PDTLEEPVGIVVQTTESK---EKLDAVVEAVRARGFEPE-------VKNTI 186
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT++RQ++ + EE VD I+V+ I + S++++S +
Sbjct: 187 CFATRQRQNSAAALAEE-VDAIVVIGGKNSSNTTHLFNICKAHCDRSFFVESAE------ 239
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E ++ L +G T+G+T+GASTPD ++ V++
Sbjct: 240 ------------ELDSSLFEGCETVGVTAGASTPDDQIQAVVE 270
>gi|302389719|ref|YP_003825540.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosediminibacter
oceani DSM 16646]
gi|302200347|gb|ADL07917.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosediminibacter
oceani DSM 16646]
Length = 672
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 163/341 (47%), Gaps = 66/341 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ +AE+ GFC+GV+ AV++ + K+ EK + I+HN V +++E + V+ +
Sbjct: 1 MQIIVAENAGFCFGVKNAVRLLEDLIKK--REKTYTLGPIVHNQQVVEKMENLGVKAV-- 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D +++G++V+ G + + K + ++D TCP+V KV + D
Sbjct: 57 -----DLDDISEGNLVIR-THGVPPDVIEQARQKGLNVIDATCPFVKKVQKLARDISEKD 110
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T +I G +H E + G+ ++++N ++A ++ F +K
Sbjct: 111 CTVVIIGDPNHPEVKGIKGWCPGEAVVIENEEDA------------------RKFFTDK- 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+VG+ QTT + ++I ++++ + F +NT
Sbjct: 152 ---------------RVGVVVQTTQTEENVKKIMDILKEKLDLAF----------FYNTR 186
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT +RQ A K V E V+++LVV G S +++K + K+ H E
Sbjct: 187 CNATHQRQKAAKK-VAESVEVMLVV-----GGKNSS--NTKKLAQVCQNVGAKVYHIETA 238
Query: 324 E--KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
+ K+ W +G +GIT+GASTPD +++V+ K+ EI RE
Sbjct: 239 DEIKKEWF-RGVEKVGITAGASTPDWIIKEVISKMEEISRE 278
>gi|269103422|ref|ZP_06156119.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163320|gb|EEZ41816.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 145/348 (41%), Gaps = 80/348 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + + + + D TCP V+KV V + +
Sbjct: 58 EE----LSEVPDDNIVIFSAHGVSQAVRNEAKARQLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T +S G +V+N + + A
Sbjct: 114 MEVVLIGHAGHPEVEGTMGQYSSDEGGMYLVENPDDVQ-------------------ALR 154
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+K K DP + +QTT+ ET ++ + + G
Sbjct: 155 DKVK-------DPS----NLHFVSQTTLSVDETSDVINTLRQVFPAIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +M + VD+++VV E+AE G P Y D I
Sbjct: 196 DDICYATQNRQDAVREMAK-NVDVMIVVGSKNSSNSNRLRELAEKLGTPGYLTDCADDID 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P NWL Q T+G+T+GAS P++ V ++ ++
Sbjct: 255 P-----------------NWLSDVQ-TVGVTAGASAPEELVNQIIARI 284
>gi|302865378|ref|YP_003834015.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora
aurantiaca ATCC 27029]
gi|302568237|gb|ADL44439.1| hydroxymethylbutenyl pyrophosphate reductase [Micromonospora
aurantiaca ATCC 27029]
Length = 346
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 147/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAVQ EA K + I++ +I+HN V + LE I VE
Sbjct: 30 RVLLANPRGYCAGVDRAVQTVEEALKLY-GAPIYVRKQIVHNKHVVRTLEAQGA--IFVE 86
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G V+ A G A E ++++ +D TCP V+KV + DY
Sbjct: 87 ENEE----VPEGATVIFSAHGVAPEVYEQAKQRSLRAIDATCPLVTKVHHEARRFAAQDY 142
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A +I + ++G + +
Sbjct: 143 DILLIGHEGHEEVIGTAGEAPAHIQL-----------------VDGPDGVDKVTVR---- 181
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP+ KV +QTT+ ET E + +L ++ + + + IC
Sbjct: 182 ------DPE----KVVWLSQTTLSVDETLETVARLKKRLPLLQSP---------PSDDIC 222
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
AT RQ + K + D+++VV R + E + G + Y + +E
Sbjct: 223 YATSNRQH-VVKEIAPACDVVIVV---GSRNSSNSVRLVEVALDAGARAGYLVDFAHEIE 278
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL G T+G+TSGAS PD+ V+ VL + E
Sbjct: 279 -DAWL-TGARTVGVTSGASVPDELVQQVLAHLAE 310
>gi|433636469|ref|YP_007270096.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070017]
gi|432168062|emb|CCK65588.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070017]
Length = 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 135/352 (38%), Gaps = 85/352 (24%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G V V LA FC GVERA++ E +++ +I+HN V L + +
Sbjct: 16 GEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA--V 72
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 73 FVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAA 132
Query: 143 GDYTSIIHGKYSHEETVATASFAGK-YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T + G HEET T A + ++V+ + LN T+ ++L
Sbjct: 133 RGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLSYL- 182
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ ET ++ ++ + F +
Sbjct: 183 ----------------------TQTTLALDETADV-------------IDALRARFPTLG 207
Query: 262 T-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSE 304
IC AT RQ A+ MV E D++LV VE+A+ G P+Y ID
Sbjct: 208 QPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLIDGP 266
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I P WL TIG+T+GAS P + V V+ +
Sbjct: 267 DDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 300
>gi|303229902|ref|ZP_07316678.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica ACS-134-V-Col7a]
gi|302515458|gb|EFL57424.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica ACS-134-V-Col7a]
Length = 632
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 89/345 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE V P+
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAADS--DGKSYTLGPIIHNPQVVGRLESKGVS--PI 56
Query: 85 EEGKKQFDVVNKGDVVVLP-AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+E +++G +++ G A+ E K + I+D TCP V K + +
Sbjct: 57 QE----VSDIDEGTMIIRSHGVGPAIYE--EAEEKGLNILDATCPHVKKAQQDAKSVIED 110
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
T +I G+ +H E + +A K II+++ + AE
Sbjct: 111 GMTLVILGEKNHPEVKSINLWANNKGIIIEDEESAE------------------------ 146
Query: 203 FKKAVSKGFDPDVDLV-KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
++ +V K+G+ QTT + + I +++EK +++ F
Sbjct: 147 -----------NLQVVEKMGVVVQTTFSQFKFNSIIEILEKK----------SKNLKIFK 185
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC+ATQERQ++ ++ VDL++V+ E+ D G +Y I++ +
Sbjct: 186 TICNATQERQNSAVELA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL-- 242
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ---------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|294793636|ref|ZP_06758773.1| penicillin tolerance protein LytB [Veillonella sp. 3_1_44]
gi|294455206|gb|EFG23578.1| penicillin tolerance protein LytB [Veillonella sp. 3_1_44]
Length = 632
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 83/342 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAAN--SDGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D+ ++ G A+ E K + +VD TCP V K +
Sbjct: 57 QEVS---DIAEGTMIIRSHGVGPAIYE--EAEEKGLHVVDATCPHVKKAQQDAKSVIDDG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G+ +H E + +A I+ +E S+ K +EK
Sbjct: 112 MTLVILGEKNHPEVKSINLWANNEGIIIEDEE----------------SAQKLQVVEKM- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G+ QTT + + I ++EK +++ F TIC
Sbjct: 155 ----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ++ + VDL++V+ E+ D G +Y I++ +
Sbjct: 189 NATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL----- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|340628361|ref|YP_004746813.1| putative LYTB-like protein LYTB1 [Mycobacterium canettii CIPT
140010059]
gi|433632480|ref|YP_007266108.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070010]
gi|340006551|emb|CCC45737.1| putative LYTB-related protein LYTB1 [Mycobacterium canettii CIPT
140010059]
gi|432164073|emb|CCK61507.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070010]
Length = 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 135/352 (38%), Gaps = 85/352 (24%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G V V LA FC GVERA++ E +++ +I+HN V L + +
Sbjct: 16 GEVTVLLASPRSFCAGVERAIETVKRV-LDVAEGPVYVRKQIVHNTVVVAELRDRGA--V 72
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VE+ + D G VVV A G + + + +Q+VD TCP V+KV +
Sbjct: 73 FVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAA 132
Query: 143 GDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T + G HEET T A + ++V+ + LN T+ ++L
Sbjct: 133 RGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADV---------AALNLPEGTQLSYL- 182
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ ET ++ ++ + F +
Sbjct: 183 ----------------------TQTTLALDETADV-------------IDALRARFPTLG 207
Query: 262 T-----ICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSE 304
IC AT RQ A+ MV E D++LV VE+A+ G P+Y ID
Sbjct: 208 QPPSEDICYATTNRQRALQSMVGE-CDVVLVIGSCNSSNSRRLVELAQRSGTPAYLIDGP 266
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
I P WL TIG+T+GAS P + V V+ +
Sbjct: 267 DDIEP-----------------EWL-SSVSTIGVTAGASAPPRLVGQVIDAL 300
>gi|58579207|ref|YP_197419.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia
ruminantium str. Welgevonden]
gi|58417833|emb|CAI27037.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
[Ehrlichia ruminantium str. Welgevonden]
Length = 332
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 151/345 (43%), Gaps = 84/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEIIHNPTVNKRLEEMAVQNIP 83
V+V LA GFC GV RA++I A + + + K I++ +EI+HN + + L+ M V I
Sbjct: 17 VEVILARPRGFCAGVSRAIEIVKLAIEYYKDTKTIYVLHEIVHNKYIVETLKTMGVIFI- 75
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ D G V++ A G + ++++ L ++++++D TCP V+KV V+ +
Sbjct: 76 -----DKVDQAQDGSVLIYSAHGVSKSIKQLAEL--RDLEVIDATCPLVNKVHKEVQLYD 128
Query: 142 KGDYTSIIHGKYSHEETVATA-SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K Y I+ G H E T + IIV+N+ + + +
Sbjct: 129 KSGYQVILIGHKGHREVEGTVGQISTPVIIVQNLNDIDKI-------------------- 168
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ FDPD K+ QTT+ +T K++ + +KF N
Sbjct: 169 --------EIFDPD----KLAYVTQTTLSVDDT----KVIIDKLKKKFP----NIKGPDL 208
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV---------EIAEDRGIPS--YWIDSEKRIGP 309
IC ATQ RQ K + E VD++ ++ + E GI + + IDS K I
Sbjct: 209 KDICYATQNRQTTT-KRLAELVDIVFILGSKNSSNSNRLKELAGIQTQAFLIDSYKEIDL 267
Query: 310 GNKIAYKLMHGELVEKENWLPKGQIT-IGITSGASTPDKAVEDVL 353
N L IT IGIT+GAS PD V+ V+
Sbjct: 268 -----------------NLL--NDITKIGITAGASAPDILVQQVI 293
>gi|374986915|ref|YP_004962410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
bingchenggensis BCW-1]
gi|297157567|gb|ADI07279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
bingchenggensis BCW-1]
Length = 333
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 147/334 (44%), Gaps = 62/334 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ EI+HN V + LE+ I V+
Sbjct: 8 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRKEIVHNKYVVQTLEKKGA--IFVD 64
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G +V+ A G A + + +D TCP V+KV + K DY
Sbjct: 65 ETEE----VPEGSIVIFSAHGVAPVVHEEARQRRLATIDATCPLVTKVHKEAVRFAKEDY 120
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A +I + ++G + L
Sbjct: 121 DILLIGHEGHEEVIGTSGEAPDHITL-----------------VDGPGDVENVQLR---- 159
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 160 ----------DESKVVWLSQTTLSVDETMET-------------VDALKERFPALISPPS 196
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ K V + DL++VV + + E +G G K + +
Sbjct: 197 DDICYATQNRQTAI-KQVAAEADLVIVV---GSKNSSNSVRLVEVALGAGAKTGHLVDFA 252
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
++ E WL +G T+G+TSGAS PD VE VL+
Sbjct: 253 SEID-EAWL-EGVTTVGVTSGASVPDVLVEGVLE 284
>gi|119946874|ref|YP_944554.1| hydroxymethylbutenyl pyrophosphate reductase [Psychromonas
ingrahamii 37]
gi|166217480|sp|A1SZP0.1|ISPH_PSYIN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|119865478|gb|ABM04955.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychromonas
ingrahamii 37]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 148/344 (43%), Gaps = 74/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV RA+ I A F I++ +E++HN V L A + V
Sbjct: 1 MEIILANPRGFCAGVHRAISIVDRALDIF-TPPIYVRHEVVHNQYVVDDLR--ARGAVFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V + +V+ A G A ++++I D TCP V+KV V + +
Sbjct: 58 EE----LDEVPENSIVIFSAHGVAQSVRAEAKRRDLKIFDATCPLVTKVHMEVTRASRRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E V T G+Y D GG S E K
Sbjct: 114 QECILIGHQGHPEVVGT---MGQY-------------DNPQGGIYLIESP------EDIK 151
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K K +P+ + ++QTT+ +T I K + + + G + IC
Sbjct: 152 KLEVK--NPN----SLCFSSQTTLSVDDTANIIKALREKFPKIDGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + E+ DL+LVV E A G+ +Y IDSEK I
Sbjct: 198 YATQNRQDAV-KALAERSDLVLVVGSTNSSNSNRLQEKASCVGVNAYLIDSEKDI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K WL ++ +G+T+GAS P+ V++V+ ++
Sbjct: 252 ------------KTEWLENVKV-VGVTAGASAPEVLVKEVIARL 282
>gi|359778469|ref|ZP_09281738.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
globiformis NBRC 12137]
gi|359304386|dbj|GAB15567.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
globiformis NBRC 12137]
Length = 358
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 62/337 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E Q +++ +I+HN V LEE +
Sbjct: 31 GPKKVLLAAPRGYCAGVDRAV-IAVEKALQHYGPPVYVRKQIVHNVHVVSSLEEQGAIFV 89
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V +G +V+ A G + + + ++ ++ +D TCP V+KV + K
Sbjct: 90 ------DETDEVPEGALVIFSAHGVSPAVVQSAEDRGLRTIDATCPLVTKVHKEAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D+ ++ G HEE T+ A ++I + +NG + +
Sbjct: 144 DDFDILLIGHDGHEEVEGTSGEAPEHIQI-----------------INGPHEVDKVTVR- 185
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DP+ KV +QTT+ ET E +L++ + F +
Sbjct: 186 ---------DPE----KVIWLSQTTLSVDETMETVRLLK-------------DRFPTLQD 219
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ K + + DL++VV A S + E + G K +Y++
Sbjct: 220 PPSDDICYATTNRQVAI-KKIAPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASYRV 275
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
V+ E+W +G T+G+TSGAS P+ V+DVL+
Sbjct: 276 DFANEVD-ESWF-EGVATVGVTSGASVPEVLVKDVLR 310
>gi|330831170|ref|YP_004394122.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii B565]
gi|328806306|gb|AEB51505.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii B565]
Length = 311
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 157/352 (44%), Gaps = 88/352 (25%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A ++F I++ +E++HN V +L+E + VEE
Sbjct: 3 ILLANPRGFCAGVDRAISIVESALEKF-GAPIYVRHEVVHNRYVVNKLKEAGA--VFVEE 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D V +V+ A G A V EM ++ +++ D TCP V+KV V + +
Sbjct: 60 ----LDEVPDDSIVIFSAHGVAKTVREMA--KSRALKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++ G H E + T G+Y +N + Y+ + + ++ K K
Sbjct: 114 SEAVLIGHAGHPEVIGT---MGQY---ENREGGMYLVE-----------TPEDVAKLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD DL V QTT+ ET ++ ++ + +HF
Sbjct: 157 -------NPD-DLCFV---TQTTLSVDETSDV-------------IDALRKHFPKIQGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ +M VD +LVV E+AE G +Y ID I
Sbjct: 193 KDDICYATQNRQDAVREMA-GLVDAMLVVGSRNSSNSNRLRELAEKVGARAYLIDDASMI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ +WL + IG+T+GAS P+ V++V+ ++ E+
Sbjct: 252 -----------------EASWLEDVK-AIGVTAGASAPEVLVQNVIARLREL 285
>gi|358636226|dbj|BAL23523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azoarcus sp.
KH32C]
Length = 311
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 154/352 (43%), Gaps = 89/352 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA GFC GVERA++I A ++F I++ +E++HN V + L A + VE
Sbjct: 5 EILLANPRGFCAGVERAIEIVERALERF-GAPIYVRHEVVHNKFVVEGLR--AKGAVFVE 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G V+ A G + + +++ D TCP V+KV V + ++
Sbjct: 62 E----LDEVPTGSTVIFSAHGVPQTVRLEAEKRGLRVFDATCPLVTKVHIEVGRMREQGR 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G H E T + +K+ + +EK +
Sbjct: 118 EIVMIGHKGHPEVEGT---------MGQVKDGIH-------------------LVEKVED 149
Query: 206 -AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
A+ DPD K+ QTT+ ++ LV T +R E F +
Sbjct: 150 VAMLNVADPD----KLAYVTQTTL---SIDDAAALV--TALR--------ERFPNIIGPK 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ K + +VD++ VV E+AE RG+P+Y ID+ + I
Sbjct: 193 KDDICYATQNRQDAV-KFMTPQVDVVFVVGSRNSSNSNRLREVAELRGVPAYLIDNAEGI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P + +G+ IG+T+GAS P+ V+ V+ ++ ++
Sbjct: 252 DPA------------------MLEGRKRIGVTAGASAPEVLVDAVIDRLKQL 285
>gi|430759508|ref|YP_007215365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430009132|gb|AGA31884.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 318
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 83/342 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GVERA++I A + F +++ +E++HN V RL V +
Sbjct: 3 LANPRGFCAGVERAIEIVERALELF-GAPLYVRHEVVHNRHVVDRLRADGVVFV------ 55
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ D V G VV+ A G ++ +++ D TCP V+KV V ++ + +
Sbjct: 56 DELDEVPDGQVVIFSAHGVPKRVQEEAAHRGLRVFDATCPLVTKVHLEVARYAREGREVV 115
Query: 149 IHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+ G H E T ++ G+ +V++ ++ + G E+
Sbjct: 116 LIGHAGHPEVEGTLGQFDPAYGGRMYLVESPED-------VAGLEVA------------- 155
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DPD ++ +QTT+ +T + + R G ++ I
Sbjct: 156 --------DPD----RLAYVSQTTLSMDDTATVIDALRARFPRVEGPRKMD--------I 195
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++V + DL+LVV EI G+ ++ +D + P
Sbjct: 196 CYATQNRQDAVKELVRQ-CDLLLVVGSSNSSNSNRLREIGARAGVEAHLVDGPADVQPA- 253
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G+ IG+T+GAS P+ V +++
Sbjct: 254 ----------------WL-QGKQHIGVTAGASAPEILVRELI 278
>gi|261212206|ref|ZP_05926492.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC341]
gi|260838814|gb|EEX65465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC341]
Length = 316
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 72/347 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELNEVPDNNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y +S T +L +
Sbjct: 114 MEVVLIGHAGHPEVEGTM---GQY-----------------------ASDTGGMYLVEKP 147
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ V K + D + +QTT+ ET ++ + + + G + IC
Sbjct: 148 EDVVKLQNKVKDPSHLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK--------DDIC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ +++ E+VD+++VV E+AE G P Y D + I P
Sbjct: 200 YATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIHP--- 255
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 256 --------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 287
>gi|297559101|ref|YP_003678075.1| hydroxymethylbutenyl pyrophosphate reductase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296843549|gb|ADH65569.1| hydroxymethylbutenyl pyrophosphate reductase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 323
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 153/337 (45%), Gaps = 64/337 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +I+HN V + LEE I VE
Sbjct: 12 RVLLANPRGYCAGVDRAVITVEKALEQY-GAPIYVRKQIVHNTHVVRTLEERGA--IFVE 68
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G +VV A G + + ++++ +D TCP V+KV ++ D
Sbjct: 69 ETEE----VPEGAIVVFSAHGVSPAVHEEAHRRSLKTIDATCPLVTKVHKEAKRFAAEDR 124
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G HEE T+ A ++I IV++ E V
Sbjct: 125 DIILIGHIGHEEVEGTSGEAPEHIQIVESPDEVHKV------------------------ 160
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+ +PD V +QTT+ ET + V+ + E F +
Sbjct: 161 ----QVRNPD----NVSWLSQTTLSVDETTQT-------------VDALRERFPNLLDPP 199
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC AT RQDA+ M E +L++VV D S + E + G A+ + +
Sbjct: 200 SDDICYATSNRQDAVKAMAPE-CELVIVV--GSDNSSNSVRL-VEVALDAGADAAHLIDN 255
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
L+ ++WL +G T+G+TSGAS PD V ++L K+
Sbjct: 256 ASLM-NDSWL-EGVTTVGVTSGASVPDILVRELLDKL 290
>gi|261250338|ref|ZP_05942914.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260939454|gb|EEX95440.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 80/348 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 5 MKIKLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 EE----LSEVPDDNIVIFSAHGVSQAVRKEAKQRDLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ ++ +
Sbjct: 118 MEVVLIGHVGHPEVEGTMGQYASDEGGMYLVERPED-----------------------V 154
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
K K+ V DP+ + +QTT+ ET ++ + + + G
Sbjct: 155 LKLKELVK---DPN----HLHYVSQTTLSVDETADVIEELRRVFPDIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +M + VD+++VV E+AE G P Y D + I
Sbjct: 200 DDICYATQNRQDAVREMATD-VDVVIVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIE 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W +G++ +G+T+GAS P++ V +L+++
Sbjct: 259 P-----------------KWF-EGKVKVGVTAGASAPEELVNQILERI 288
>gi|417954637|ref|ZP_12597669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342814913|gb|EGU49844.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 317
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 80/348 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKIKLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 EE----LSEVPDDNIVIFSAHGVSQAVRKEAKQRDLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ ++ +
Sbjct: 114 MEVVLIGHVGHPEVEGTMGQYASDEGGMYLVERPED-----------------------V 150
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
K K+ V DP+ + +QTT+ ET ++ + + + G
Sbjct: 151 LKLKELVK---DPN----HLHYVSQTTLSVDETADVIEELRRVFPDIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +M + VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAVREMATD-VDVVIVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIE 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W +G++ +G+T+GAS P++ V +L+++
Sbjct: 255 P-----------------KWF-EGKVKVGVTAGASAPEELVNQILERI 284
>gi|291302984|ref|YP_003514262.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
gi|290572204|gb|ADD45169.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
Length = 334
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV+ +A + + +++ +I+HN V LEE I VE
Sbjct: 16 RVLLAKPRGYCAGVDRAVETVEKALELY-GPPVYVRKQIVHNKHVVATLEEAGA--IFVE 72
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G +VV A G A E ++++ +D TCP V+KV + + DY
Sbjct: 73 EN----DEVPPGSIVVFSAHGVAPEVHEQAKQRDLKAIDATCPLVTKVHSEARRFAAQDY 128
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T A + I + + E
Sbjct: 129 DILLIGHDGHEEVIGTTGEAPENITLVDGPE----------------------------- 159
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT--- 262
DV VKV N+ L T + + ++ V+ + + F +
Sbjct: 160 --------DVKNVKVRDENKVVWLSQTTLSVDETMDT-------VDGLRQRFPLLQSPPS 204
Query: 263 --ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
IC ATQ RQ + K + + D++LVV E + G++ Y + +
Sbjct: 205 DDICYATQNRQQVV-KEIADDCDVMLVVGSTNSSNSVRLV---EVALQAGSRAGYLVDYA 260
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ E+WL +G T+G+TSGAS PD V VL+ + E
Sbjct: 261 HEIQ-ESWL-EGATTVGVTSGASVPDDLVTGVLEFLAE 296
>gi|393759426|ref|ZP_10348241.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393162315|gb|EJC62374.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 323
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N +V LA+ GFC GV+RA+ I A + I++ +EI+HN V + L I
Sbjct: 9 NAEVVLAQPRGFCAGVDRAIDIVERA-LELHGAPIYVRHEIVHNRYVVEDLRSKGAIFI- 66
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
K+ D G +V+ A G + + + +++ D TCP V+KV V + +
Sbjct: 67 -----KELDEAPAGAIVIFSAHGVSRQVRDEAERRGLKVFDATCPLVTKVHIEVSRMRAE 121
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T G+ +G E +
Sbjct: 122 GREIIMIGHVGHPEVEGTL------------------------GQADGGMYLVETPEDVA 157
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K V+ DPD K+ QTT+ + + +V + + +F + E S I
Sbjct: 158 KLNVA---DPD----KLAFVTQTTL----SVDDAAVVAQALRERF--PTIVEPKKS--DI 202
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K++ + DL+LVV E+AE +G +Y +D + I P
Sbjct: 203 CYATQNRQDAV-KIMAPQCDLVLVVGSTNSSNSNRLREVAERKGAEAYLLDKPEMIDPA- 260
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL G+ +G+T+GAS P+ V V++++ E+
Sbjct: 261 ----------------WL-VGKKRVGVTAGASAPEVLVNQVIQRLQEL 291
>gi|187478893|ref|YP_786917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bordetella
avium 197N]
gi|115423479|emb|CAJ50013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (putative drug
tolerance protein) [Bordetella avium 197N]
Length = 328
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 146/354 (41%), Gaps = 83/354 (23%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + +V LA+ GFC GV+RA++I A + I++ +EI+HN V + L
Sbjct: 9 TAADAEVLLAQPRGFCAGVDRAIEIVERA-LELHGAPIYVRHEIVHNRYVVEDLRAKGAI 67
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I + D G +VV A G + + +++ D TCP V+KV V +
Sbjct: 68 FI------DELDQAPTGSIVVFSAHGVSKAVRAEAEARGLRVFDATCPLVTKVHIEVARM 121
Query: 141 KKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
+ I+ G H E T A G Y++ E V D + G T
Sbjct: 122 RAAGREIIMIGHKGHPEVEGTLGQAQSGMYLV-------ETVAD------VEGLIVT--- 165
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF-GVENVNEHF 257
DPD + QTT+ + + V + + +F G+ +
Sbjct: 166 -------------DPD----NLAFVTQTTL----SVDDAAAVSRALKARFPGIVEPKK-- 202
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ K++ + DL+LVV E+AE G+ +Y +D
Sbjct: 203 ---SDICYATQNRQDAV-KVLAPECDLVLVVGSPNSSNSNRLREVAERIGVEAYLVDGAS 258
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P WL + + IGIT+GAS P+ V V+ +V E+
Sbjct: 259 SIDPA-----------------WL-RERRRIGITAGASAPEVLVNQVIDRVKEL 294
>gi|239616620|ref|YP_002939942.1| hydroxymethylbutenyl pyrophosphate reductase [Kosmotoga olearia TBF
19.5.1]
gi|259493949|sp|C5CIU9.1|ISPH_KOSOT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|239505451|gb|ACR78938.1| hydroxymethylbutenyl pyrophosphate reductase [Kosmotoga olearia TBF
19.5.1]
Length = 298
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNI 82
+K+ LAES GFC+GV RAV EA K+ +EK + +I+HN V K+L++M ++
Sbjct: 1 MKIVLAESLGFCYGVNRAV----EATKRLLKEKRDARVIGDIVHNEIVMKKLKDMGLKVY 56
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
P + F + V ++ A GA+ + L + +VD TCP V V++ + +K
Sbjct: 57 P-DLSSIDFSDTAENSVAIIRAHGASPDVEDFLKRRFGYVVDLTCPIVYNVFSLAKDLEK 115
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y +I GK H E A Y+IV+ + E T +AFL +
Sbjct: 116 KGYFIVIFGKKDHAEVKALCGRLNDYLIVEPGYDFE----------------TIKAFLRE 159
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE-NVNEHFISFN 261
K KV + +QTTM +E KL EK +++ G+E +VN N
Sbjct: 160 KKPK------------KVALISQTTM---NSESFEKLAEK-LLKLEGIEVSVN------N 197
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM--H 319
TIC+ T R+ M + + D ++VV KR K+A K++ H
Sbjct: 198 TICNVTINRE-KMAIHLAQTCDAVVVV--------------GGKRSSNTGKLA-KIVESH 241
Query: 320 GEL---VEKENWLPKGQI--TIGITSGASTPDKAVEDVL 353
G+ V+ LP I +GI SG STP + + +L
Sbjct: 242 GKRAFHVQNPEQLPDLSIYRKVGIISGTSTPKEQILKIL 280
>gi|91784960|ref|YP_560166.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
xenovorans LB400]
gi|91688914|gb|ABE32114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
xenovorans LB400]
Length = 319
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 152/353 (43%), Gaps = 77/353 (21%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 5 DTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKKG 63
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
I ++ + V G+ V+ A G + + +++ D TCP V+KV V
Sbjct: 64 AIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAEIRGLRVYDATCPLVTKVHIEVA 117
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K ++ + ++ G H E T AG + M E + D
Sbjct: 118 KMRQDGFDIVMIGHKGHPEVEGTMGQAG-----EGMHLVEDIED---------------- 156
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
++ + A DP+ ++ QTT+ ++ +++ + + +
Sbjct: 157 -VQALQLA-----DPE----RIAFVTQTTL---SVDDAAQIIAALKAKYPSIREPKKQ-- 201
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS +
Sbjct: 202 ---DICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSPDQ 257
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 258 IDP-----------------VWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|328947790|ref|YP_004365127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
succinifaciens DSM 2489]
gi|328448114|gb|AEB13830.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
succinifaciens DSM 2489]
Length = 284
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 146/340 (42%), Gaps = 66/340 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEA---RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN 81
+KV A+ GFC GV RAV+ A A ++ +K++ +IHNP V LE+ Q
Sbjct: 1 MKVVRAKVLGFCMGVRRAVETASAALENSEKNGHKKVFTLGPLIHNPLVMDSLEKKGAQI 60
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ + G VVV+ A G + + L N+ +I+D TCP V + K
Sbjct: 61 LE----PSSLEKAKSGSVVVIRAHGTTPQVVSALENQGAEILDATCPRVHLSQKRAAEWK 116
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-L 200
K + +I G +H E V+ + +A + +V S +EA +
Sbjct: 117 KKGFLVVIAGDKNHGEVVSISGYAENHAVV--------------------VESAEEALKI 156
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E +K V + QTT E E+I +++ N F
Sbjct: 157 EIPEKTV--------------LIAQTTFSPVEFEKIASALKQK----------NPSVQIF 192
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
N+IC AT ERQ+A+ K +E KVD ILV+ ++ + + I K
Sbjct: 193 NSICSATMERQNAL-KELEGKVDAILVIG-------GKNSANTRRLFETASLICGKTA-- 242
Query: 321 ELVEKENWLPKGQI---TIGITSGASTPDKAVEDVLKKVF 357
L+E + +P T+G+T+GASTPD ++++ + +
Sbjct: 243 -LIEDSSEIPDSFFSLKTVGLTAGASTPDFVIDEIERALL 281
>gi|77461070|ref|YP_350577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens Pf0-1]
gi|123603233|sp|Q3K6L8.1|ISPH_PSEPF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|77385073|gb|ABA76586.1| IspH protein (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
reductase) [Pseudomonas fluorescens Pf0-1]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
+++KLA GFC GV+RA++I A + F I++ +E++HN V +E++ ++ I
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFV---VEDLRIRGAIF 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 57 VEE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVAKYSRD 112
Query: 144 DYTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
I+ G H E T AS G +V++ K+ EL + K A
Sbjct: 113 GRECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AELQVHNPDKLA 163
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
F+ QTT+ +T + + +T G ++
Sbjct: 164 FV-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD--- 196
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 197 ----ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +++W G IGIT+GAS P+ V V++++
Sbjct: 252 L-----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|294791775|ref|ZP_06756923.1| penicillin tolerance protein LytB [Veillonella sp. 6_1_27]
gi|294457005|gb|EFG25367.1| penicillin tolerance protein LytB [Veillonella sp. 6_1_27]
Length = 632
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 83/342 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAAN--SDGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D+ ++ G A+ E K + +VD TCP V K +
Sbjct: 57 QEVS---DIAEGTMIIRSHGVGPAIYE--EAEEKGLHVVDATCPHVKKAQQDAKSVIDEG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G+ +H E + +A I+ +E S+ K +EK
Sbjct: 112 MTLVILGEKNHPEVKSINLWANNEGIIIEDEE----------------SAQKLQVVEKM- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G+ QTT + + I ++EK +++ F TIC
Sbjct: 155 ----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ++ + VDL++V+ E+ D G +Y I++ +
Sbjct: 189 NATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL----- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|359424547|ref|ZP_09215660.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia amarae
NBRC 15530]
gi|358240147|dbj|GAB05242.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia amarae
NBRC 15530]
Length = 318
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 149/351 (42%), Gaps = 88/351 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ EI+HN V + L E +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVERALDKY-GAPVYVRKEIVHNRHVVETLTERGAVFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + E T +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDDVPEGAIVVFSAHGVSPEVHKTAAERNLKTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + ++G SS + +
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPEHIQL-----------------VDGPSSVENVSVR---- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ V++TM V+ + E F
Sbjct: 158 ----------DESKVIWLSQTTL----------SVDETMAT---VDRLRERFPLLADPPS 194
Query: 261 NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRI 307
+ IC ATQ RQ A+ M + +L++V VE+A G +Y +D + I
Sbjct: 195 DDICYATQNRQVAVKAMAPQ-CELVIVVGSKNSSNSVRLVEVALQNGAGAAYLVDYAREI 253
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
P WL G T+G+TSGAS P+ V V++ + E
Sbjct: 254 DPA-----------------WL-DGVTTVGVTSGASVPEVLVRGVVELLAE 286
>gi|223039541|ref|ZP_03609828.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
rectus RM3267]
gi|222879112|gb|EEF14206.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
rectus RM3267]
Length = 280
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 150/337 (44%), Gaps = 71/337 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++++LA SYGFC+GV+RA++IA A+ IIHN RL + N+
Sbjct: 5 LRIELASSYGFCFGVKRAIKIAENAKDAVT------IGPIIHNNDEINRLNKNF--NVKT 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG D +N ++ G ++ L +++++D TCP+V+K EK K
Sbjct: 57 LEG---IDEINGAKKAIIRTHGITKGDLAELKKSDIKVIDATCPFVTKPQQICEKMSKEG 113
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G +H E S+A GK +V + GEL G KF
Sbjct: 114 YDIVIFGDENHPEIKGVKSYAVGKVFVVLDE------------GELAGV---------KF 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ KV + +QTT + E+ ++V M+R V E + FNTI
Sbjct: 153 AQ-------------KVAVISQTTR---KVEKFMQIVNFLMLR------VKEVRV-FNTI 189
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT E Q+A+ K + K D +++V ++ S+ LV
Sbjct: 190 CNATFENQEAV-KNLAAKADAMVIVGGKNSSNTKQLYLISKS----------ACEDSYLV 238
Query: 324 EKENWLPK----GQITIGITSGASTPDKAVEDVLKKV 356
E E+ L + G+ G+++GASTPD ++ V+ ++
Sbjct: 239 ENESELERAWFEGKNLCGVSAGASTPDWIIQKVVGRL 275
>gi|398980967|ref|ZP_10689199.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM25]
gi|398133998|gb|EJM23174.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM25]
Length = 314
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 147/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AELQVHNPDKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|395795253|ref|ZP_10474562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
Ag1]
gi|395340616|gb|EJF72448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
Ag1]
Length = 315
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 146/350 (41%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
A + +P+ K+ QTT+ +T + ++ + F +
Sbjct: 150 DVAALQVHNPE----KLAFVTQTTLSMDDTSRV-------------IDALRSRFPAIGGP 192
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ +E D++LVV E+AE PSY ID +
Sbjct: 193 RKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPSYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +W G IGIT+GAS P+ V V++++
Sbjct: 252 M-----------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|282848928|ref|ZP_06258318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
parvula ATCC 17745]
gi|282581433|gb|EFB86826.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
parvula ATCC 17745]
Length = 632
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 83/342 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAANN--DGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D+ ++ G A+ E K + +VD TCP V K +
Sbjct: 57 QEVS---DIAEGTMIIRSHGVGPAIYE--EAEEKGLHVVDATCPHVKKAQQDAKSVIDEG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G+ +H E + +A I+ +E S+ K +EK
Sbjct: 112 MTLVILGEKNHPEVKSINLWANNEGIIIEDEE----------------SAQKLQVVEKM- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G+ QTT + + I ++EK +++ F TIC
Sbjct: 155 ----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ++ + VDL++V+ E+ D G +Y I++ +
Sbjct: 189 NATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL----- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|383784997|ref|YP_005469567.1| 4-hydroxy-3-methylbut-2-enyl-diphosphate reductase [Leptospirillum
ferrooxidans C2-3]
gi|383083910|dbj|BAM07437.1| 4-hydroxy-3-methylbut-2-enyl-diphosphate reductase [Leptospirillum
ferrooxidans C2-3]
Length = 302
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 85/348 (24%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
L E G C GV+ A+++A ++ ++ ++I +EI+HN V K L VQ++
Sbjct: 5 LPEYAGVCVGVKLAIKLANKSAEE-SVGPVFILHEIVHNTHVVKDLANRGVQSV------ 57
Query: 89 KQFDVVNKGD--VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D V++ D +++ A G A + + +KN+++VDTTCP VSK+ V +YT
Sbjct: 58 ---DAVSEVDRGTLIISAHGVAPDVIKEARDKNLEVVDTTCPLVSKIHRIVRNLADKNYT 114
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G+ SH+E + +A ++I + + E E +
Sbjct: 115 ILLLGEESHDEVMGVQGWAKEHIHIFHKPE------------------------EIDRLP 150
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
V G V + +QTT +EI L + K+ V+ NTICDA
Sbjct: 151 VVSG--------PVALVSQTTQSIKYFDEILAL----LTVKYPQLEVH------NTICDA 192
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
T++RQ + ++ + +D+++ V E++ SY +DS K I P
Sbjct: 193 TEKRQTSALEIAGD-MDVMITVGSTTSANSRRLQEVSAGLCPKSYLVDSAKDINP----- 246
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
W G +G+T+GASTPD +E V++++ EI E
Sbjct: 247 ------------EWF-NGSERVGVTAGASTPDWLIEGVIERLGEISSE 281
>gi|254774114|ref|ZP_05215630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 332
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 146/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V LE+ +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVSTLEKAGAVFV-- 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G +VV A G A +N+ +D TCP V+KV + + D
Sbjct: 80 ----EETDEVPEGAIVVFSAHGVAPTVHAAAAERNLHTIDATCPLVTKVHNEARRFARND 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G ++ +
Sbjct: 136 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVAAVDNVTVRDED 178
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K V +QTT+ ET EI VE+ R +++ + IC
Sbjct: 179 KVV--------------WLSQTTLSVDETMEI---VERLRQRFPKLQDPPS-----DDIC 216
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E DL++VV +S + + H LV+
Sbjct: 217 YATQNRQVAVKAMAPE-CDLVIVVGSRNSS-------NSVRLVEVALGGGAGAAH--LVD 266
Query: 325 -----KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G T+G+TSGAS P+ V+ VL+++ E
Sbjct: 267 WADDIDPAWL-EGVTTVGVTSGASVPEVLVQGVLERLAE 304
>gi|256374878|ref|YP_003098538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinosynnema
mirum DSM 43827]
gi|255919181|gb|ACU34692.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
Length = 314
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +++ +++ EI+HN V + L + +
Sbjct: 4 RVLLANPRGYCAGVDRAVVTVEKALEKY-GAPVYVRKEIVHNKHVVETLSKRGAIFV--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + + +++++ +D TCP V+KV ++ + DY
Sbjct: 60 ---NETDEVPEGALVVFSAHGVSPKVHEEAADRSLRTIDATCPLVTKVHKEAQRFAREDY 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A +I + + E
Sbjct: 117 DILLIGHEGHEEVEGTAGEAPDHIQLVDTAE---------------------------DV 149
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
A + DP KV +QTT+ V++TM+R V + E F
Sbjct: 150 AKVEVRDPS----KVIWLSQTTL----------SVDETMVR---VRQLKERFPDLQEPPS 192
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ M E DL+LVV S + E + G K +Y + +
Sbjct: 193 DDICYATSNRQVAVKTMAPE-CDLVLVV--GSKNSSNSVRL-VEVALQAGAKASYLIDYA 248
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E V+ E WL +G T+G+TSGAS PD V D+LK + E
Sbjct: 249 EEVD-EAWL-EGVGTVGVTSGASVPDILVMDLLKHLAE 284
>gi|384105544|ref|ZP_10006461.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
imtechensis RKJ300]
gi|419961017|ref|ZP_14477027.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
opacus M213]
gi|424851313|ref|ZP_18275710.1| LytB family protein [Rhodococcus opacus PD630]
gi|432333242|ref|ZP_19585041.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
wratislaviensis IFP 2016]
gi|356665978|gb|EHI46049.1| LytB family protein [Rhodococcus opacus PD630]
gi|383835507|gb|EID74933.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
imtechensis RKJ300]
gi|414573644|gb|EKT84327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
opacus M213]
gi|430779850|gb|ELB94974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
wratislaviensis IFP 2016]
Length = 336
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 54/345 (15%)
Query: 10 IKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPT 69
I + ++G G +V LAE G+C GV+RAV+ +A ++ I++ EI+HN
Sbjct: 11 ITRSADSGASRADGEKRVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRH 69
Query: 70 VNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPW 129
V + L + V + + D V +G ++V A G + + +N++ +D TCP
Sbjct: 70 VVETLTDQGVVFV------DETDEVPEGALLVFSAHGVSPAVHESAAARNLRTIDATCPL 123
Query: 130 VSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGEL 189
V+KV ++ + D+ ++ G HEE TA A ++ + +
Sbjct: 124 VTKVHQEAKRFARDDFDILLIGHEGHEEVEGTAGEAPDHVQL-----------------V 166
Query: 190 NGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKF 248
+G S + D KV +QTT+ ET + + +L E+
Sbjct: 167 DGPDSVDAVTVR--------------DESKVIWLSQTTLSVDETMQTVARLRER------ 206
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIG 308
N+ + + IC ATQ RQ A+ M E DL++VV R + E +G
Sbjct: 207 -FPNLQDP--PSDDICYATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALG 259
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
G K +Y + + V+ WL G T+GITSGAS P+ V V+
Sbjct: 260 AGAKASYLVDYAREVDPA-WL-DGVRTVGITSGASVPEILVRGVI 302
>gi|149911066|ref|ZP_01899694.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moritella sp.
PE36]
gi|149805892|gb|EDM65880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moritella sp.
PE36]
Length = 314
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 149/349 (42%), Gaps = 84/349 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A + F E +++ +E++HN V L+E + V
Sbjct: 1 MEILLANPRGFCAGVDRAISIVERALELF-ETPVYVRHEVVHNRYVVDGLKENGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G VV+ A G + +++++ D TCP V+KV V + +
Sbjct: 58 EE----LDEVPDGRVVIFSAHGVSKAVQAEAKRRDLKVFDATCPLVTKVHMEVTRASRRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y N Y+ + I + E ++
Sbjct: 114 IECVLIGHKGHPEVEGT---MGQY---DNADGGMYLVESI--------ADVAELSVK--- 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
D+ + ++QTT+ + I ++ + E F
Sbjct: 157 -----------DVNNLTYSSQTTLSVDDCSGI-------------IDALRERFPEIKGPR 192
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ K+ VD++ VV E +E+ G+PSY ID+ I
Sbjct: 193 KDDICYATQNRQDAVSKLA-GMVDIMFVVGSKNSSNSNRLREKSENLGVPSYLIDNAGDI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P L +G++ +G+T+GAS P ++ V++K+
Sbjct: 252 DP------------------VLLEGKLKVGVTAGASAPKILIDQVVEKL 282
>gi|114706696|ref|ZP_01439597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvimarina
pelagi HTCC2506]
gi|114538088|gb|EAU41211.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvimarina
pelagi HTCC2506]
Length = 342
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 146/342 (42%), Gaps = 58/342 (16%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T +++KL E GFC GV+RA+QI A K++ +++ +EI+HN V L +M
Sbjct: 14 TKPALRLKLCEPRGFCAGVDRAIQIVVLALKKY-GAPVYVRHEIVHNKYVVDGLRDMGAV 72
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ K+ +V + G VV A G +++ +D TCP VSKV +H
Sbjct: 73 FV-----KELHEVPDDGQPVVFSAHGVPKSVPARAEARDMFYLDATCPLVSKVHKQGLRH 127
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K ++ G H E V T LG G+ + E
Sbjct: 128 VKLGRHVLLIGHAGHPEVVGT-----------------------LGQLPEGTVTLIET-- 162
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
++ VS F+P D +G QTT+ +T V K + KF S
Sbjct: 163 ---EEDVS-AFEP-ADPSALGFITQTTLSVDDTAG----VVKALQAKFP----EMQAPSS 209
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+IC AT RQDA+ K+ + DL +VV A + ++ KR G + +
Sbjct: 210 ESICYATTNRQDAV-KVAAPETDLFVVVG-APNSSNSKRLVEVAKRFGARDAM------- 260
Query: 321 ELVEKENWLP----KGQITIGITSGASTPDKAVEDVLKKVFE 358
LVE E +P K TI +++GAS PD ++ ++ K E
Sbjct: 261 -LVENEREIPWESLKTGATIALSAGASAPDILIDAIIAKARE 301
>gi|419760475|ref|ZP_14286754.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Thermosipho africanus H17ap60334]
gi|407514578|gb|EKF49393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Thermosipho africanus H17ap60334]
Length = 811
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 73/329 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ GFC+GVE+AV + E K +K++ ++I+HN V + LE + +
Sbjct: 1 MQIKIAKGIGFCFGVEKAVNVTKELLKS--GKKVFTDDDIVHNKQVMEELERLGLS---- 54
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ GD+ ++ A G E++ + + ++VD TC V ++ +VE ++
Sbjct: 55 ---------YDNGDIYLIRAHGLPKEKIEKIKKDH-RVVDLTCNIVYNLFKTVEVYENKG 104
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +++GK +H E +A S++ II T E + K
Sbjct: 105 YQVVVYGKITHPEMIALKSYSKNAII------------------------TMEPLVIKSD 140
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K+ +A+QTTM + E KL + ++ +F V FN+I
Sbjct: 141 --------------KIFVASQTTMSYKDFENFYNKLKDISIYNEFKV---------FNSI 177
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+ T R+ + K+ +E VDL++VV + ++ K ++ K +H E +
Sbjct: 178 CNITHNREIEVEKLSKE-VDLMIVVG-------GKHSSNTRKLFNIASQ-HTKAIHIETI 228
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDV 352
++ +PKG ++GI SG STP + VE++
Sbjct: 229 DEIKEIPKGVDSVGIISGTSTPKEIVEEI 257
>gi|217970192|ref|YP_002355426.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thauera sp.
MZ1T]
gi|217507519|gb|ACK54530.1| hydroxymethylbutenyl pyrophosphate reductase [Thauera sp. MZ1T]
Length = 312
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 145/346 (41%), Gaps = 77/346 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA GFC GVERA++I A K++ I++ +E++HN V L A I V+
Sbjct: 5 EILLANPRGFCAGVERAIEIVERALKRY-GAPIYVRHEVVHNKFVVDDLR--AKGAIFVD 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G+ V+ A G ++ + +++ D TCP V+KV V + +
Sbjct: 62 E----LDEVPTGNTVIFSAHGVSLAVREEAERRGLRVFDATCPLVTKVHVEVARMRDQGK 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G H E T G+++G E +
Sbjct: 118 EIVMIGHKGHPEVEGTM------------------------GQVDGGIHLVETPADVAGL 153
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
V+ DP+ ++ QTT+ + I + R G + + IC
Sbjct: 154 QVA---DPE----QLAYVTQTTLSVDDAAAIVDALRTRFPRVVGPKK--------DDICY 198
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K + D++ VV E+A RG+P+Y ID+ I P
Sbjct: 199 ATQNRQDAV-KFMTPYADVVFVVGSKNSSNSNRLREVAALRGVPAYLIDNAAGIDPA--- 254
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ +G+ IG+T+GAS P+ V +V+ ++ E+
Sbjct: 255 --------------WI-EGKRRIGVTAGASAPEVLVAEVIARLEEL 285
>gi|116671379|ref|YP_832312.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. FB24]
gi|116611488|gb|ABK04212.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. FB24]
Length = 359
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 62/337 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V LEE +
Sbjct: 31 GPKKVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEKGAIFV 89
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V +G +V+ A G + + + ++ ++ +D TCP V+KV + K
Sbjct: 90 ------DETDEVPEGALVIFSAHGVSPAVVQSAEDRGLRTIDATCPLVTKVHREAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
D+ ++ G HEE TA A ++I + +NG + +
Sbjct: 144 DDFDILLIGHDGHEEVEGTAGEAPEHIQI-----------------INGPHEVDKVTVR- 185
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DP+ KV +QTT+ ET E +L++ E F +
Sbjct: 186 ---------DPE----KVIWLSQTTLSVDETMETVRLLK-------------ERFPTLQD 219
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ K + + DL++VV A S + E + G K +Y++
Sbjct: 220 PPSDDICYATTNRQVAI-KKISPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASYRV 275
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
V+ E W +G T+G+TSGAS P+ V+DVL+
Sbjct: 276 DFANEVD-EAWF-EGVATVGVTSGASVPEVLVKDVLR 310
>gi|168186332|ref|ZP_02620967.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum C str. Eklund]
gi|169295859|gb|EDS77992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum C str. Eklund]
Length = 634
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 156/337 (46%), Gaps = 65/337 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA+ GFC+GV+RAV A ++ ++ I+ +IHN V + L+ + +I ++
Sbjct: 3 KILLADKAGFCFGVKRAVDTAITCSNEY-KKPIYTLGPLIHNNDVVEFLKSKNITSIELD 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + + +GDVV++ + G + L +KN+ I D TCP+V+ + +V+K+ + Y
Sbjct: 62 E----INSLKEGDVVIIRSHGITPSVIKLLKDKNLIIADATCPYVAHIHETVKKYYQLGY 117
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
II G +H E V + I+ LN S +
Sbjct: 118 QIIIVGDKNHPEVVGINGYCNNTAIISK-------------DGLNIKSLSD--------- 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV I +QTT + E K+++K + + + +FNTIC+
Sbjct: 156 -------------KVCIVSQTT---EKQENFNKVIDKIIP-------LCKSLANFNTICN 192
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT+ RQ++ K + +KVD ++V+ G S ++ K K +H VE
Sbjct: 193 ATKTRQESA-KELSQKVDSMVVI-----GGYHSS--NTTKLYEICKKNCNNTIH---VEN 241
Query: 326 ENWLPKGQI----TIGITSGASTPDKAVEDVLKKVFE 358
+ +P+ I IG+T+GASTP +++ + K+ E
Sbjct: 242 ASEIPQDLIENSNNIGVTAGASTPAWIIKEAILKMSE 278
>gi|406888152|gb|EKD34721.1| hypothetical protein ACD_75C02217G0001 [uncultured bacterium]
Length = 309
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 140/340 (41%), Gaps = 80/340 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GVERA++ +++ +++ +EI+HN V LE+ +
Sbjct: 7 VYLASPRGFCAGVERAIETVKICLQRY-GRPVYVLHEIVHNKHVISELEQSGAVFV---- 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ + +G+V + A G ++ ++ VD TCP V+ V VEK+ Y
Sbjct: 62 --EHLSEIPQGEVCIFSAHGVSLAIKKKARELGLRTVDATCPLVTSVHGMVEKYHAMGYD 119
Query: 147 SIIHGKYSHEETVATAS-FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G + H E TA A + IV + +EA + A ++K
Sbjct: 120 VVIIGHHKHPEVEGTAGRVADRVHIVADEEEARTI-----------------AVMDKE-- 160
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
KV QTT+ K + I +++ G + IC
Sbjct: 161 -------------KVAYVTQTTLNKNDIVGILDVLQSRFPHIKGPP---------SNICF 198
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K + E DL+ VV E+A+ G+ ++ ID I P
Sbjct: 199 ATQNRQDAV-KQLAEISDLVFVVGSKNSSNSNRLREVAKQCGVEAHLIDDYHDIDPA--- 254
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL G+ IGIT+GAS P++ V+ V+
Sbjct: 255 --------------WL-SGRKKIGITAGASAPERLVDGVI 279
>gi|398850125|ref|ZP_10606833.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM80]
gi|398249487|gb|EJN34873.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM80]
Length = 314
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 147/354 (41%), Gaps = 93/354 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AELQVHNPDKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + ++ + F +
Sbjct: 165 V-----------------------TQTTLSMDDTSRV-------------IDALRSRFPA 188
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID
Sbjct: 189 IGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLID 247
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +++W G IGIT+GAS P+ V V++++
Sbjct: 248 GAEDL-----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|418053992|ref|ZP_12692048.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
gi|353211617|gb|EHB77017.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
Length = 325
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 64/328 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+QI +A +F +++ +EI+HN V L+ +
Sbjct: 8 LKILLAAPRGFCAGVDRAIQIVEQALTKF-GAPVYVRHEIVHNRYVVDSLKAKGAVFV-- 64
Query: 85 EEGKKQFD-VVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
K+ D + + V+ A G A N+N+ +VD TCP VSKV +H +
Sbjct: 65 ----KELDEIPDTRQPVIFSAHGVAKAVPEAAKNRNMFVVDATCPLVSKVHMEATRHYEQ 120
Query: 144 DYTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
I+ G + H E V T AG +VK+ K+A AF+
Sbjct: 121 GREIILVGHHGHPEVVGTLGQLPAGAIHLVKSAKDA-------------------RAFMP 161
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ D K+ QTT+ +T EI ++++ + G V E
Sbjct: 162 R-------------DSSKLAYVTQTTLSLDDTAEIVAVLKERFPQIGG--PVKE------ 200
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
IC AT RQ+A+ K + K+D +LV+ G P +S + + K K
Sbjct: 201 DICYATTNRQNAV-KSIAPKIDGLLVI------GGPKSS-NSLRLVEVAAKAGCKFSF-- 250
Query: 322 LVEKENWLPKGQI----TIGITSGASTP 345
LVE+ N +P ++ TIGIT+GAS P
Sbjct: 251 LVERANDIPWRELEHARTIGITAGASAP 278
>gi|420152334|ref|ZP_14659387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
massiliensis F0489]
gi|394764941|gb|EJF46575.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
massiliensis F0489]
Length = 345
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 147/343 (42%), Gaps = 64/343 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G ++ LA G+C GV+RAV +A + I++ EI+HN V + L +
Sbjct: 13 GTGRILLAAPRGYCAGVDRAVDAVEQALAHY-GAPIYVRKEIVHNKYVVEALSRRGAIFV 71
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V +G VV A G + ++ +Q +D TCP V+KV + K
Sbjct: 72 ------SETDEVPEGARVVFSAHGVSPAVHAQAASRQLQTIDATCPLVTKVHKQAIRFAK 125
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
GDY I+ G HEE T A +I V +NG +
Sbjct: 126 GDYDIILVGHSGHEEVEGTQGEAPDHIQV-----------------VNGPHEVDAVTVR- 167
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DP+ KV +QTT+ ET E +L + E F
Sbjct: 168 ---------DPE----KVVWISQTTLSVDETLETVRL-------------LRERFPHLSD 201
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWID-SEKRIGPGNKIAYK 316
+ IC ATQ RQ A+ K + +VD+++VV G S + E + G A++
Sbjct: 202 PPGDDICYATQNRQGAV-KTIAPQVDVMVVV----GSGNSSNSVRLKEVALEAGAPAAHR 256
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ + +E E+W G T+G+TSGAS P+ V +V++++ E+
Sbjct: 257 VDYARELE-ESWF-VGARTVGLTSGASVPEILVREVIERLGEM 297
>gi|433649654|ref|YP_007294656.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium smegmatis JS623]
gi|433299431|gb|AGB25251.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium smegmatis JS623]
Length = 333
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 148/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRHVVDTLAKAGAVFV--- 79
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G A T + ++++D TCP V+KV ++ + DY
Sbjct: 80 ---DETDEVPEGAIVVFSAHGVAPTVHETAAARELKVIDATCPLVTKVHNEAKRFARDDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G + + + K
Sbjct: 137 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPDAVDDVTVRDENK 179
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
+ +QTT+ ET E V + E F +
Sbjct: 180 VI--------------WLSQTTLSVDETMET-------------VRRLREKFPTLQDPPS 212
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E L++VV R + E +G G+ A+ + +
Sbjct: 213 DDICYATQNRQVAVKAMAPE-CQLVIVV---GSRNSSNSVRLVEVALGAGSDAAHLVDYA 268
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ WL +G T+G+TSGAS P+ V VL+++ +
Sbjct: 269 DDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAD 304
>gi|389581080|ref|ZP_10171107.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfobacter postgatei 2ac9]
gi|389402715|gb|EIM64937.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfobacter postgatei 2ac9]
Length = 568
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 149/356 (41%), Gaps = 92/356 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+K+ +A++ GFC GV RAV + +A + +E I+ +IHNP V + LE +
Sbjct: 1 MKISIAKTAGFCMGVRRAVDMVLDASNE-AKEPIYTYGPLIHNPQVLEMLESKQIFRMDT 59
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
IP E GK +V++ A G E+ L + +++ TCP V +V ++K+
Sbjct: 60 IP-ESGK---------GIVLIRAHGVPPEDEKALADAGFTVLNATCPRVVRVQVIIDKYS 109
Query: 142 KGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K Y +II G H E + +A GK + N+ + + L
Sbjct: 110 KKGYDTIILGDEKHPEVIGLLGYARGKGHTITNLDQLKS--------------------L 149
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+F+KAV V Q T + + +E H+ F
Sbjct: 150 PRFEKAVV-----------VAQTTQNTKIFAQIKE-------------WCSTNTPHYEIF 185
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
NTICD+T++RQ+ + +M D ++VV ++A + G PS
Sbjct: 186 NTICDSTEKRQNEVREMAVTH-DAVIVVGGKFSGNTKRLAQVAAETGKPS---------- 234
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQI-TIGITSGASTPDKAVEDVLKKVFEIKREE 363
MH E + ++ + +I IT+GASTP+ + D +V + RE+
Sbjct: 235 ---------MHIEQASEIDYASISHVQSIAITAGASTPNWIINDTCSRVEQALREK 281
>gi|255322490|ref|ZP_05363635.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
showae RM3277]
gi|255300398|gb|EET79670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
showae RM3277]
Length = 276
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 63/333 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LA SYGFC+GV+RA++IA A+ IIHN RL + N+
Sbjct: 1 MKIELASSYGFCFGVKRAIKIAENAKDAVT------IGPIIHNNDEINRLNKNF--NVKT 52
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EG + D K ++ G ++ L +++++D TCP+V+K EK K
Sbjct: 53 LEGISEIDGEKKA---IIRTHGITKGDLAELKKSDIKVIDATCPFVTKPQQICEKMSKEG 109
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y +I G H E S+A GK +V ++E+E LE
Sbjct: 110 YDIVIFGDEKHPEIKGVKSYAIGKVFVV--LEESE---------------------LEGV 146
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K A KV + +QTT + E+ ++V M+R V E + FNTI
Sbjct: 147 KLA-----------QKVAVISQTTR---KVEKFMQIVNYLMLR------VKEVRV-FNTI 185
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+AT E Q+A+ K + + D+++VV ++ S+ + +Y L+ EL
Sbjct: 186 CNATFENQEAV-KNLAVRADVMVVVGGKNSSNTKQLYLISK----TACEDSY-LVENELE 239
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W +G+ G+++GASTPD ++ V+ ++
Sbjct: 240 LERAWF-EGKNLCGVSAGASTPDWIIQKVIDRL 271
>gi|41408782|ref|NP_961618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|417749726|ref|ZP_12398115.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium avium subsp. paratuberculosis S397]
gi|440778124|ref|ZP_20956892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis S5]
gi|50400912|sp|Q73WH6.1|ISPH_MYCPA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|41397140|gb|AAS05001.1| LytB' [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458725|gb|EGO37685.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium avium subsp. paratuberculosis S397]
gi|436721508|gb|ELP45632.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis S5]
Length = 332
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 146/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V LE+ +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVSTLEKAGAVFV-- 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G +VV A G A +N+ +D TCP V+KV + + D
Sbjct: 80 ----EETDEVPEGAIVVFSAHGVAPTVHAAAAERNLHTIDATCPLVTKVHNEARRFARND 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G ++ +
Sbjct: 136 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVAAVDNVRVRDED 178
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K V +QTT+ ET EI VE+ R +++ + IC
Sbjct: 179 KVV--------------WLSQTTLSVDETMEI---VERLRQRFPKLQDPPS-----DDIC 216
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E DL++VV +S + + H LV+
Sbjct: 217 YATQNRQVAVKAMAPE-CDLVIVVGSRNSS-------NSVRLVEVALGGGAGAAH--LVD 266
Query: 325 -----KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G T+G+TSGAS P+ V+ VL+++ E
Sbjct: 267 WADDIDPAWL-EGVTTVGVTSGASVPEVLVQGVLERLAE 304
>gi|365840242|ref|ZP_09381442.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaeroglobus
geminatus F0357]
gi|364562032|gb|EHM39903.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaeroglobus
geminatus F0357]
Length = 457
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 148/351 (42%), Gaps = 87/351 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V +A + GFC+GV RAV++A +A E IIHNP + L E V PV
Sbjct: 1 MRVHIAAACGFCYGVRRAVELAAQA-----EAGTHTLGPIIHNPQLVDSLSEKGVT--PV 53
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V G +++ + G + + + IVD TCP V K K
Sbjct: 54 ----NSLEEVADGSRLLIRSHGVGPDVYDEAEKRRLHIVDATCPHVKKAQQDARKVINAK 109
Query: 145 YTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+I G+ H E ++ + + G + II+ ++EAE + + E
Sbjct: 110 KVLVIIGEKDHPEVISISQWGGNRAIIIDKVEEAEEI-----------------PYCETM 152
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
G+ QTT + ++I E + K G H + TI
Sbjct: 153 -----------------GVVVQTTFSQSRFKQI----ESVLAGKTG------HLDVYMTI 185
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C AT++RQ+A ++ KVD ++V+ ++ ++G P+Y +++ I P +
Sbjct: 186 CAATRQRQEAAVELA-GKVDAMIVIGGRNSANTGRLAQVCAEQGCPTYHVETAAEINPDD 244
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
+ MH IG+T+GAST D +++V+K + +++ E
Sbjct: 245 ---FAGMH---------------DIGVTAGASTTDWIIQEVVKMMEDLQTE 277
>gi|224370270|ref|YP_002604434.1| protein IspH [Desulfobacterium autotrophicum HRM2]
gi|223692987|gb|ACN16270.1| IspH [Desulfobacterium autotrophicum HRM2]
Length = 567
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 141/335 (42%), Gaps = 84/335 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A + GFC GV RAV + +A +E+I +IHNP V + LE+ + +I
Sbjct: 1 MKITIARTAGFCMGVRRAVDLVLDASNA-TKERICTYGPLIHNPQVLEMLEKKGIPSINT 59
Query: 85 EEGKKQFDVVNKGD-VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ KG+ V++ A G ++ L +++D TCP V +V T ++KH
Sbjct: 60 --------IPEKGEGTVLIRAHGVPPQDKRQLELAGFKVIDATCPRVIRVQTIIKKHTDQ 111
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y SII G H E +AGK G + + A LEK
Sbjct: 112 GYASIILGDRDHPEVKGLLGYAGK----------------------GGVAVSSLAALEKL 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
P D + I QTT E++ + + EN E+ + F+TI
Sbjct: 150 ---------PSFD--RAIIVAQTTQDTHLFEQV---------KVWAQENHPEYKV-FDTI 188
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
CD+T++RQ KM + D ++VV ++A D G P++ I+
Sbjct: 189 CDSTEKRQAETRKM-AQICDAVVVVGGRESGNTRRLAQVARDTGKPAFHIEDVS------ 241
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 346
EL KE G I IT+GASTP+
Sbjct: 242 ---------ELDIKEL---AGAKHIAITAGASTPN 264
>gi|420908819|ref|ZP_15372135.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-R]
gi|420915209|ref|ZP_15378514.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-S]
gi|420921390|ref|ZP_15384687.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-S]
gi|420926088|ref|ZP_15389375.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-1108]
gi|420965559|ref|ZP_15428774.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0810-R]
gi|420976438|ref|ZP_15439622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0212]
gi|420981815|ref|ZP_15444987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-R]
gi|421005970|ref|ZP_15469086.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0119-R]
gi|421011683|ref|ZP_15474779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-R]
gi|421016604|ref|ZP_15479673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-S]
gi|421022051|ref|ZP_15485100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0731]
gi|421027667|ref|ZP_15490705.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-R]
gi|421032817|ref|ZP_15495840.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-S]
gi|392122893|gb|EIU48655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-S]
gi|392125279|gb|EIU51037.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-R]
gi|392131226|gb|EIU56972.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-S]
gi|392140613|gb|EIU66342.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-1108]
gi|392172279|gb|EIU97951.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0212]
gi|392175217|gb|EIV00880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-R]
gi|392203440|gb|EIV29034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0119-R]
gi|392212156|gb|EIV37721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-R]
gi|392216374|gb|EIV41918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0731]
gi|392217226|gb|EIV42765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-S]
gi|392231726|gb|EIV57232.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-S]
gi|392232284|gb|EIV57785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-R]
gi|392258033|gb|EIV83481.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0810-R]
Length = 322
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 11 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 68 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 124 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 163 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 200 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 255
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 256 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 291
>gi|91776781|ref|YP_546537.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacillus
flagellatus KT]
gi|91710768|gb|ABE50696.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacillus
flagellatus KT]
Length = 320
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 146/345 (42%), Gaps = 87/345 (25%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GV+RA+ I +A ++F I++ +E++HN V L++ I VEE
Sbjct: 17 LANPRGFCAGVDRAIIIVEQALEKF-GAPIYVRHEVVHNKFVVDDLKKKGA--IFVEE-- 71
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
D V G+ V+ A G + + + +Q+ D TCP V+KV V K + I
Sbjct: 72 --LDEVPAGNTVIFSAHGVSKDVRAEAEARGLQVFDATCPLVTKVHLEVAKMRASGKEII 129
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G H E T M +AE GG S A LE
Sbjct: 130 MIGHKGHPEVEGT------------MGQAE-------GGMYLVESPEDVAMLEV------ 164
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENVNEHFISFNTI 263
DP ++ QTT+ + I K E T R ++I
Sbjct: 165 --KDPS----QLAYVTQTTLSIDDAAAIVSALKAKFPEITPPRS-------------DSI 205
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K++ DL++VV E+A+++G+ SY +D+ + P
Sbjct: 206 CYATQNRQDAV-KVMARDCDLVIVVGSPNSSNSNRLREVAQNQGVESYMVDNASFLDPA- 263
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W+ G+ IG+++GAS P+ V++V+ K+
Sbjct: 264 ----------------WI-VGKKRIGVSAGASAPEVLVQEVINKL 291
>gi|169628350|ref|YP_001701999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus ATCC 19977]
gi|169240317|emb|CAM61345.1| Probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Mycobacterium abscessus]
Length = 337
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 26 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 82
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 83 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 138
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 139 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 177
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 178 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 214
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 215 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 270
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 271 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 306
>gi|420863219|ref|ZP_15326612.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0303]
gi|420867616|ref|ZP_15331001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RA]
gi|420872048|ref|ZP_15335428.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RB]
gi|420930406|ref|ZP_15393682.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-151-0930]
gi|420938842|ref|ZP_15402111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-152-0914]
gi|420940655|ref|ZP_15403918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-153-0915]
gi|420945639|ref|ZP_15408892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-154-0310]
gi|420950926|ref|ZP_15414172.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0626]
gi|420955097|ref|ZP_15418336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0107]
gi|420960431|ref|ZP_15423660.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-1231]
gi|420986223|ref|ZP_15449385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0206]
gi|420991067|ref|ZP_15454219.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0307]
gi|420996901|ref|ZP_15460041.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-R]
gi|421001330|ref|ZP_15464462.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-S]
gi|421038071|ref|ZP_15501082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-R]
gi|421042401|ref|ZP_15505407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-S]
gi|392073019|gb|EIT98859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RA]
gi|392073739|gb|EIT99577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0303]
gi|392076237|gb|EIU02070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RB]
gi|392139424|gb|EIU65156.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-151-0930]
gi|392144357|gb|EIU70082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-152-0914]
gi|392156131|gb|EIU81836.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-153-0915]
gi|392158847|gb|EIU84543.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-154-0310]
gi|392160703|gb|EIU86394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0626]
gi|392188603|gb|EIV14239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0206]
gi|392189145|gb|EIV14779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-R]
gi|392190078|gb|EIV15710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0307]
gi|392201849|gb|EIV27449.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-S]
gi|392226285|gb|EIV51799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-R]
gi|392243405|gb|EIV68891.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-S]
gi|392254826|gb|EIV80289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-1231]
gi|392255625|gb|EIV81086.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0107]
Length = 322
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 11 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 68 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 124 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 163 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 200 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 255
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 256 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 291
>gi|398833793|ref|ZP_10591914.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. YR522]
gi|398220852|gb|EJN07287.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. YR522]
Length = 322
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 150/356 (42%), Gaps = 91/356 (25%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
+ ++ LA+ GFC GV+RA++I A +QF I++ +EI+HN V L A I
Sbjct: 4 ADTEILLAQPRGFCAGVDRAIEIVERALQQF-GAPIYVRHEIVHNAYVVADLR--AKGAI 60
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+EE V G+ V+ A G + + + + D TCP V+KV V K ++
Sbjct: 61 FIEE----LADVPAGNTVIFSAHGVSKAIQAEAAQRGLTVFDATCPLVTKVHMEVAKMRR 116
Query: 143 GDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
I+ G H E T + AG +++ E V D A L
Sbjct: 117 EGREIIMIGHAGHPEVEGTMGQTEAGMHLV-------ETVGDV--------------ALL 155
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ +A+ + +QTT+ +T +I + + F
Sbjct: 156 QVADEAL------------LAYVSQTTLSVDDTADI-------------ISALRARFPDI 190
Query: 261 -----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
IC AT RQ+A+ K + +VD+++VV E+AE +G+P++ +DS
Sbjct: 191 VEPKKGDICYATTNRQEAV-KFMAPQVDVVIVVGSPNSSNSNRLREVAEKKGVPAFMVDS 249
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W+ G+ IG+T+GAS P+ V+ V+ ++ EI
Sbjct: 250 AALIDP-----------------QWV-AGKHRIGVTAGASAPEVLVQAVIDRLKEI 287
>gi|397678906|ref|YP_006520441.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense str. GO 06]
gi|418248948|ref|ZP_12875270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 47J26]
gi|419711449|ref|ZP_14238912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M93]
gi|419715298|ref|ZP_14242703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M94]
gi|353450603|gb|EHB98997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 47J26]
gi|382938771|gb|EIC63100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M93]
gi|382944067|gb|EIC68376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M94]
gi|395457171|gb|AFN62834.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense str. GO 06]
Length = 337
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 26 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 82
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 83 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 138
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 139 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 177
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 178 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 214
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 215 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 270
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 271 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 306
>gi|345009042|ref|YP_004811396.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
violaceusniger Tu 4113]
gi|344035391|gb|AEM81116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
violaceusniger Tu 4113]
Length = 347
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 147/334 (44%), Gaps = 62/334 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ EI+HN V + LE+ I V+
Sbjct: 11 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRKEIVHNKYVVRTLEKKGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G +V+ A G A + + VD TCP V+KV + K DY
Sbjct: 68 ETEE----VPEGSIVIFSAHGVAPVVHEEAAERKLATVDATCPLVTKVHKEAVRFAKEDY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A +I + ++G K +
Sbjct: 124 DILLIGHEGHEEVIGTSGEAPDHITL-----------------VDGPDDVKNVEVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F
Sbjct: 163 ----------DESKVVWLSQTTLSVDETMET-------------VDALKERFPQLISPPS 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ K V + DL++VV S + E IG G K + + +
Sbjct: 200 DDICYATQNRQIAI-KQVAAESDLVIVV--GSKNSSNSVRL-VEVAIGAGAKDGHLVDYA 255
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
++ E WL +G T+G+TSGAS PD VE VL+
Sbjct: 256 SEID-EAWL-EGVTTVGVTSGASVPDVLVEGVLE 287
>gi|257063683|ref|YP_003143355.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Slackia
heliotrinireducens DSM 20476]
gi|256791336|gb|ACV22006.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Slackia
heliotrinireducens DSM 20476]
Length = 276
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 144/338 (42%), Gaps = 85/338 (25%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK 89
A+ G C+GVERA+ + A +E + +IHNP V +LE V+ + +G +
Sbjct: 6 AKHAGVCYGVERALDMVSAASMDG-DEDTFTLGPLIHNPQVVAKLESRGVRAV---DGPE 61
Query: 90 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSII 149
Q D +V+L G L ++++ ++D TCP V+K S T +I
Sbjct: 62 QVD----HGIVILRTHGVEPHIAADLKSRDLTVIDATCPHVAKAQRSAANLADTCGTVLI 117
Query: 150 HGKYSHEETVATASFAG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
G+ H E + +AG K I+V ++ E LE+
Sbjct: 118 IGRAEHPEIRSVREYAGEKAIVVADVDEV-------------------PEHLEE------ 152
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQ 268
VG+ QTT K E++ +V + R GVE + NTIC AT+
Sbjct: 153 ----------PVGVIVQTTESK---EKLQAVVNELEAR--GVETQVK-----NTICFATR 192
Query: 269 ERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+RQDA + +E VD ++V+ EI D SY++++++ + P
Sbjct: 193 QRQDAAAALADE-VDAMVVIGGKNSSNTTHLYEICRDHCDRSYFVETKEELDP------- 244
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+W +G+T+GASTPD +EDV+
Sbjct: 245 ----------SWFSATD-RVGVTAGASTPDYQIEDVIS 271
>gi|444433636|ref|ZP_21228774.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia soli
NBRC 108243]
gi|443885577|dbj|GAC70495.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia soli
NBRC 108243]
Length = 317
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ +A + +++ EI+HN V + L E +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVEKALDKH-GAPVYVRKEIVHNRHVVETLAERGAVFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + E T +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGALVVFSAHGVSPEVHRTAAERNLKTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G +S +
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPSHVQL-----------------VDGPASVDNVTVR---- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D K+ +QTT+ ET E + +L E KF + N + IC
Sbjct: 158 ----------DESKIVWLSQTTLSVDETMETVTRLRE-----KFPLLNDP----PSDDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M + DL++VV S + E + G K ++ + + VE
Sbjct: 199 YATQNRQVAVKAMA-PRCDLVIVV--GSKNSSNSVRL-VEVALQAGAKASHLVDYARDVE 254
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL +G T+GITSGAS P+ V VL + E
Sbjct: 255 VE-WL-EGVETVGITSGASVPEVLVRGVLDLLAE 286
>gi|326793619|ref|YP_004311439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas
mediterranea MMB-1]
gi|326544383|gb|ADZ89603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas
mediterranea MMB-1]
Length = 316
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 145/354 (40%), Gaps = 73/354 (20%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++LA GFC GV+RA+ I F E I++ +E++HN V + L+ +
Sbjct: 4 SIQLANPRGFCAGVDRAIDIVNRCLDLF-EAPIYVRHEVVHNKFVVESLKGRGAVFV--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +V+ A G + + + +++ D TCP V+KV V ++ +
Sbjct: 60 ---DELDQVPDDKIVIFSAHGVSQAVKTEASRRGLKVFDATCPLVTKVHLEVVRYARDGM 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G H E T G+Y D GG + + ++
Sbjct: 117 ECVLIGHDGHPEVEGT---MGQY-------------DTSKGGAIYLVENAEDV------- 153
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
A K DPD K+ QTT+ +T + + + G + IC
Sbjct: 154 ATLKVSDPD----KLAFVTQTTLSMDDTSVVIDALRQRFPNICGPRK--------DDICY 201
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K + DL+LVV E+AE G ++ ID+ I
Sbjct: 202 ATQNRQDAV-KTLASDCDLVLVVGSVNSSNSNRLRELAERMGTKAHLIDNASEI------ 254
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+ WL G ++GIT+GAS P+ V DV++++ EE +L
Sbjct: 255 -----------QCEWL-DGVSSVGITAGASAPEVLVTDVIQRLVSEGGEEPKEL 296
>gi|427414340|ref|ZP_18904530.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
ratti ACS-216-V-Col6b]
gi|425714716|gb|EKU77719.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
ratti ACS-216-V-Col6b]
Length = 631
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 156/351 (44%), Gaps = 87/351 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++++AE+ GFC+GV+RAV +A + Q E+ + IIHNP V LEE V +
Sbjct: 1 MEIRIAENCGFCYGVKRAVNMAQKTSDQL--ERSYTLGPIIHNPQVVSNLEEHGVYAV-- 56
Query: 85 EEGKKQFDVVNKGDVVVLP-AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+ + G V++ G AV + T +K +++VD TCP V K +
Sbjct: 57 ----DSLEEIPSGTVIIRSHGVGPAVYDEAT--DKGLKVVDATCPHVKKAQQDAKSVIDS 110
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ +I G+ H E ++ +A K I++++ +EA+ + F+E
Sbjct: 111 GMSLVILGEKKHPEVISINLWAQNKGIVIESEEEAKIL-----------------PFVEN 153
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
G+ QTT + + + I ++E+ R V F T
Sbjct: 154 R-----------------GVVVQTTFSQFKFQSIIDILEEK-TRNLKV---------FKT 186
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQERQ++ ++ + VDL++VV E+ D G +Y I++ +
Sbjct: 187 ICTATQERQNSAVELA-KTVDLMIVVGGKNSGNTNRLAEVCRDVGCTTYHIETATEL--- 242
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
+ W Q T+G+T+GASTPD +++V+ + E ++
Sbjct: 243 --------------EMAWFTNVQ-TVGVTAGASTPDWIIKEVIDTMNEFEQ 278
>gi|399001536|ref|ZP_10704249.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM18]
gi|398127426|gb|EJM16836.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM18]
Length = 315
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 146/345 (42%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEATGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A + +P+ ++ QTT+ +T + + K G + I
Sbjct: 150 DVAALQVNNPE----RLAFVTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|418419497|ref|ZP_12992680.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001127|gb|EHM22323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus subsp. bolletii BD]
Length = 327
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ +++ +EI+HN V L + I V+
Sbjct: 16 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGA--IFVD 72
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VV A G A +N++ +D TCP V+KV ++ + D+
Sbjct: 73 E----TDEVPEGAIVVFSAHGVAPTVHEKAAERNLKTIDATCPLVTKVHQEAKRFARDDF 128
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + TA A ++ + ++G ++ +
Sbjct: 129 DILLIGHEGHEEVIGTAGEAPDHVQL-----------------VDGPNAVDNVTVR---- 167
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
D KV +QTT+ ET E V+ + E F +
Sbjct: 168 ----------DENKVIWLSQTTLSVDETMET-------------VQRLRERFPTLQDPPS 204
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E +L++VV R + E + G++ +Y + +
Sbjct: 205 DDICYATQNRQVAVKAMAPE-CELVIVV---GSRNSSNSVRLVEVALNAGSRASYLVDYA 260
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E ++ WL +G T+G+TSGAS P+ V VL+++ E
Sbjct: 261 EDIDPA-WL-EGVTTVGVTSGASVPEVLVRGVLERLAE 296
>gi|212696092|ref|ZP_03304220.1| hypothetical protein ANHYDRO_00628 [Anaerococcus hydrogenalis DSM
7454]
gi|212676721|gb|EEB36328.1| hypothetical protein ANHYDRO_00628 [Anaerococcus hydrogenalis DSM
7454]
Length = 692
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 66/346 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV +A++ GFC GV R+V +A +A ++ +K + ++HNPT + LE+ V I
Sbjct: 1 MKVIVAKNSGFCNGVRRSVDLANKASEK--NKKTYTLGPLVHNPTQVQMLEDKGVGVIDE 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E K D +V+ + G E + ++D TCP + ++ +++ +
Sbjct: 59 NEVIKLND-----SQIVIRSHGVREELKDNIRKNQNNVIDATCPVLINIYKKIKEKENEG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E A AS+ II+K+ EA+ +
Sbjct: 114 YKVVIVGDKNHPEIKAMASYINDGIIIKDETEAKNIT----------------------- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
++ K+ + +QTT E I +EKT N+ + NTIC
Sbjct: 151 -----------NMSKLYVVSQTTNRIDFFENIAHELEKT----------NDDVVIENTIC 189
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT+ RQ+A K + ++VD ++VV G S ++ K K + E V+
Sbjct: 190 NATRLRQEAC-KSLSKEVDCMVVV-----GGFNSS--NTNKLYQIAQKYCKNVQRIETVK 241
Query: 325 KENWLPKGQIT----IGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
LP +++ IG+ +GASTPDK +E+V+ ++ ++ EE +
Sbjct: 242 D---LPLQKLSNFNIIGVIAGASTPDKVIEEVVNRMDDLTNEELMN 284
>gi|210615658|ref|ZP_03290704.1| hypothetical protein CLONEX_02922 [Clostridium nexile DSM 1787]
gi|210150201|gb|EEA81210.1| hypothetical protein CLONEX_02922 [Clostridium nexile DSM 1787]
Length = 284
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 56/334 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V+LA++ GFC+GV+RAV+ YE ++ + KI+ IIHN V K + V+ I
Sbjct: 1 MEVRLAKTAGFCFGVKRAVETVYEQAQKRSDVKIYTYGPIIHNEEVVKDMRSKGVEVIYT 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E Q + VV++ + G A E L + + VD TCP+V K+ VEK
Sbjct: 61 QEELMQL----QSGVVIIRSHGVAKEIYKILEERGLSCVDATCPFVKKIHRIVEKESMEG 116
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
+I G SH E +A ++K +++A+ + + SS
Sbjct: 117 KHIVIIGDESHPEVQGIKGWAENDVTVIKTVEDAQ---------KFHVSSD--------- 158
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
VKV + +QTT + LVE + + + NTI
Sbjct: 159 --------------VKVCVVSQTTF---NYNKFKYLVEIISKKSYDIS-------VLNTI 194
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C AT+ERQ+ + KVD ++V+ + +++K +K + + +
Sbjct: 195 CSATKERQEEA-DQIARKVDAMIVIG-------DKHSSNTQKLFEICDKACNNTYYIQTL 246
Query: 324 EKENW-LPKGQITIGITSGASTPDKAVEDVLKKV 356
+ N K T+GIT+GASTP +E+V V
Sbjct: 247 DDLNMNQLKSVKTVGITAGASTPKNIIEEVQNNV 280
>gi|383830471|ref|ZP_09985560.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora xinjiangensis XJ-54]
gi|383463124|gb|EID55214.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora xinjiangensis XJ-54]
Length = 349
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 62/333 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A +++ +++ EI+HN V L + V I V+
Sbjct: 35 RVLLAKPRGYCAGVDRAVVTVEKALEKY-GPPVYVRKEIVHNKHVVDTLRQRGV--IFVD 91
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +VV A G + +N++ +D TCP V+KV V + + DY
Sbjct: 92 ETSE----VPEGALVVFSAHGVSPAVHAEAEERNLRTIDATCPLVTKVHKEVNRFARDDY 147
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ A +++ + + E
Sbjct: 148 DILLIGHEGHEEVEGTSGEAPEHVQLVDTPE----------------------------- 178
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DVD V V ++ L T V++TM R V + E F
Sbjct: 179 --------DVDKVTVRDPSKVVWLSQTTLS----VDETMER---VNQLKERFPELADPPS 223
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ M E DL+LVV R + E + G K A+ + +
Sbjct: 224 DDICYATSNRQIAVKAMAAE-CDLVLVV---GSRNSSNSKRLVEVALQAGAKEAHLIDYA 279
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
V++E WL +G TIG+TSGAS PD V ++L
Sbjct: 280 REVDEE-WL-RGAETIGVTSGASVPDVLVLELL 310
>gi|145593437|ref|YP_001157734.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinispora
tropica CNB-440]
gi|145302774|gb|ABP53356.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinispora
tropica CNB-440]
Length = 327
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 62/336 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ EA K + I++ +I+HN V + LE I VE
Sbjct: 12 RVILAKPRGYCAGVDRAVQTVEEALKLY-GAPIYVRKQIVHNRHVVRTLEGKGA--IFVE 68
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G VV A G A E +++++ +D TCP V+KV ++ DY
Sbjct: 69 ENEE----VPEGATVVFSAHGVAPEVHEQARSRSLKAIDATCPLVTKVHQEAKRFAAEDY 124
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE + TA A ++I +V ++AE V
Sbjct: 125 DILLIGHEGHEEVIGTAGEAPEHIQLVDGPQDAERVTVR--------------------- 163
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DP+ KV +QTT+ ET E + +L ++ M + + I
Sbjct: 164 -------DPN----KVVWLSQTTLSVDETLETVARLKKRLPMLQSP---------PSDDI 203
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRG---IPSYWIDSEKRIGPGNKIAYKLMHG 320
C AT RQ + K + D+++VV + +D+ R G A ++
Sbjct: 204 CYATSNRQH-VVKQIASDCDVMIVVGSTNSSNSVRLVEVALDAGARAGHLVDFAREI--- 259
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ WL +G T+G+TSGAS P++ V++ L +
Sbjct: 260 ----DDAWL-EGARTVGLTSGASVPEELVQEALAHL 290
>gi|170754879|ref|YP_001781355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B1 str. Okra]
gi|429246339|ref|ZP_19209669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium botulinum CFSAN001628]
gi|169120091|gb|ACA43927.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum B1 str. Okra]
gi|428756649|gb|EKX79191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium botulinum CFSAN001628]
Length = 638
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KSKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ A K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQAAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|152965091|ref|YP_001360875.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kineococcus
radiotolerans SRS30216]
gi|151359608|gb|ABS02611.1| hydroxymethylbutenyl pyrophosphate reductase [Kineococcus
radiotolerans SRS30216]
Length = 361
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 151/343 (44%), Gaps = 53/343 (15%)
Query: 13 LKENGFEYTW-GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVN 71
L +G W G +V LA G+C GV+RAV IA E + +++ EI+HN V
Sbjct: 24 LAASGRRPAWDGRKRVLLAAPRGYCAGVDRAV-IAVEKALELYGAPVYVRKEIVHNKHVV 82
Query: 72 KRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVS 131
+ L E + + D V +G+ +V A G + +++Q +D TCP V+
Sbjct: 83 RTLSERGAVFV------DETDAVPEGEHLVFSAHGVSPAVREAAAARSLQTIDATCPLVT 136
Query: 132 KVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNG 191
KV + K D ++ G HEE TA A +I V + E V D I
Sbjct: 137 KVHKEAVRFAKQDAEILLIGHTGHEEVEGTAGEAPDHITVVDSPE---VADTI------- 186
Query: 192 SSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE 251
+ K DPD +LV + +QTT+ ET E +R+
Sbjct: 187 ----------QVK-------DPD-NLVWL---SQTTLSVDETME--------TVRRLRQR 217
Query: 252 NVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGN 311
N + IC AT RQ A+ K+ E DL++VV A S + E + G
Sbjct: 218 FPNLQDPPSDDICYATSNRQVAVKKIAPE-ADLVIVVGSANSSN--SVRL-VEVALDAGA 273
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ ++++ V+ + W +G T+G+TSGAS P+ V +VL+
Sbjct: 274 RASHRVDGAHEVD-DAWF-EGVTTVGVTSGASVPEILVREVLE 314
>gi|302530082|ref|ZP_07282424.1| LytB protein [Streptomyces sp. AA4]
gi|302438977|gb|EFL10793.1| LytB protein [Streptomyces sp. AA4]
Length = 336
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A E + +++ EI+HN V L E V I V+
Sbjct: 24 RVLLAKPRGYCAGVDRAV-VAVEKALELYGPPVYVRKEIVHNRHVVDTLRERGV--IFVD 80
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +VV A G + +N++ +D TCP V+KV V + K DY
Sbjct: 81 ETSE----VPEGALVVFSAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFAKDDY 136
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA G + K ++K +
Sbjct: 137 DILLIGHEGHEEVEGTA----------------------------GEAPDKVQLVDKPE- 167
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DVD V V ++ L T V++TM R V+ + + F +
Sbjct: 168 --------DVDKVDVRDPSKVIWLSQTTLS----VDETMER---VDQLRDRFPTLSDPPS 212
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ M E DL+LVV +++ ++ + G A L+
Sbjct: 213 DDICYATTNRQVAVKAMAPE-CDLVLVVG-SKNSSNSKRLVEVALKAGAS---ASHLIDF 267
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL +G T+G+TSGAS PD V D+LK
Sbjct: 268 ASEVDEAWL-EGVSTVGVTSGASVPDVLVMDLLK 300
>gi|406894557|gb|EKD39345.1| hypothetical protein ACD_75C00436G0001 [uncultured bacterium]
Length = 314
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 135/340 (39%), Gaps = 80/340 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GVERA++ +F + +++ +EI+HN V LE+ +
Sbjct: 7 VYLASPRGFCAGVERAIETVRICLSRF-GKPVYVLHEIVHNKHVIAELEQAGAVFV---- 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ + +G V + A G ++ ++ VD TCP V+ V VEK+ Y
Sbjct: 62 --EHLRDIPQGGVCIFSAHGVSLTIEKKARELGLRTVDATCPLVTSVHGMVEKYHAMGYD 119
Query: 147 SIIHGKYSHEETVATAS-FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G + H E TA G+ IV + EAE +
Sbjct: 120 VVIIGHHGHPEVEGTAGRVQGRVHIVADEAEAETIT------------------------ 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
D KV QTT+ K + I +++++ R G + IC
Sbjct: 156 --------VADAGKVAYVTQTTLNKNDILGILEILQRRFPRIKGPP---------SNICF 198
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K + DL+ VV E+A G+ ++ ID I P
Sbjct: 199 ATQNRQDAV-KQLAGISDLLFVVGSKNSSNSNRLREVARQCGVEAHLIDDFHDIDPSALQ 257
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
A K IGIT+GAS P++ V+ V+
Sbjct: 258 AKK------------------RIGITAGASAPERLVDGVI 279
>gi|260913218|ref|ZP_05919700.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
dagmatis ATCC 43325]
gi|260632805|gb|EEX50974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
dagmatis ATCC 43325]
Length = 314
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 145/347 (41%), Gaps = 74/347 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E+ + I++ +E++HN V L E I V
Sbjct: 1 MKIILANPRGFCAGVDRAISIV-ESALEIHGSPIYVRHEVVHNRFVVNGLRERGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LDEVPNGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVEGT---MGQY-------------DNPEGGIF---------LVESVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + +L QTT+ +T E+ +E + ++ + N IC
Sbjct: 149 DIAKLGLKQEDELT---FMTQTTLSIDDTSEV---IEALKQKYPAIQGPRK-----NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ ++ DL++VV E+A G+ S ID I P
Sbjct: 198 YATTNRQQAVRELAQQS-DLVIVVGSKNSSNSNRLAELASRMGVMSKLIDDADDIEP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
WL TIGIT+GAS P+ V+ V+K++ E+
Sbjct: 254 --------------QWLENVN-TIGITAGASAPEVLVQSVVKRLQEL 285
>gi|256379028|ref|YP_003102688.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
gi|255923331|gb|ACU38842.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
Length = 307
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 134/341 (39%), Gaps = 81/341 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEA--RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V LA FC GVERAV+I E R+ P + + +I+HN V RLE M +
Sbjct: 6 VLLASPRSFCAGVERAVEIVEELLRRRGGP---VHVRKQIVHNTHVVARLESMGAVFV-- 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V G VVV A G + + ++VD TCP V+KV +
Sbjct: 61 ----DELDEVPDGAVVVFSAHGVSPAVRAEAERRGFEVVDATCPLVTKVHAEARRFAGRG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T ++ G HEE T A +++ + EA +
Sbjct: 117 DTVVLIGHAGHEEVEGTLGEAPDRMLLVDGPEAVAALEV--------------------- 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP+ +V QTT+ E E+ + K G S + IC
Sbjct: 156 ------EDPE----RVSYLMQTTLAADEATEVVAALRKRFPALRG--------PSSDDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+A+ ++ E DL+LV VE+ G+P++ ID + + P
Sbjct: 198 YATTNRQEAVREVAREA-DLVLVVGSANSSNSARLVELVRREGVPAHLIDDVRDLRP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G +G+++GAS P V++V+
Sbjct: 254 --------------RWL-EGVRVVGLSAGASAPPGLVDEVV 279
>gi|402698414|ref|ZP_10846393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fragi A22]
Length = 315
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ +KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MHIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +++ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVILIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T A G +V++ K+ LN + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDARNGGAIYLVEDEKDV---------ANLNVINPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T ++++ R + +
Sbjct: 165 V-----------------------TQTTLSMDDTS---RVIDALRARFPAIGGPRK---- 194
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
N IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 195 -NDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W +G +IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QQSWF-EGVESIGITAGASAPEVLVRGVIRQL 283
>gi|398964700|ref|ZP_10680477.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM30]
gi|398148086|gb|EJM36774.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM30]
Length = 314
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 147/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AELQVRNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|297569033|ref|YP_003690377.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurivibrio
alkaliphilus AHT2]
gi|296924948|gb|ADH85758.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurivibrio
alkaliphilus AHT2]
Length = 279
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 137/342 (40%), Gaps = 100/342 (29%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEA--RKQFPEEKIWITNEIIHNPTVNKRLEEMAV--- 79
+KV LA+ GFC GV RAV+ + +Q P I +IHNP V + LEE V
Sbjct: 1 MKVILAQHAGFCMGVRRAVETTLKLVDLRQGP---IATYGPLIHNPQVLEMLEEKGVKVL 57
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
+ +P + VV+ A G E L V + D TCP V KV ++K
Sbjct: 58 EEVPA----------DTTGTVVIRAHGVPPERKHRLEASGVVVEDATCPRVVKVQAIIDK 107
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGKYIIV----KNMKEAEYVCDYILGGELNGSSST 195
++K YT++I G H E AG +V ++ E + YI
Sbjct: 108 YQKEGYTTVIVGDRDHAEVEGLMGHAGAAGLVVSRLTDLDELQLAPPYI----------- 156
Query: 196 KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNE 255
+ +QTT + EE+ + + ++++F V
Sbjct: 157 --------------------------VVSQTT----QDEELFREITDEILKRFPGGKV-- 184
Query: 256 HFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
FNTICD+T +RQD + +M E +D ++VV EIA P + +++
Sbjct: 185 ----FNTICDSTHKRQDEVREMCRE-IDALVVVGGRNSANTKRLAEIAHGLNCPVFLVET 239
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
E + P K H +G+T+GASTP
Sbjct: 240 EDELEPDK---LKKFH---------------CVGVTAGASTP 263
>gi|94501192|ref|ZP_01307714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bermanella
marisrubri]
gi|94426619|gb|EAT11605.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanobacter
sp. RED65]
Length = 314
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 156/345 (45%), Gaps = 53/345 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A F E I++ +E++HN V L + +
Sbjct: 1 MEITLANPRGFCAGVDRAIDIVNRALDIF-EPPIYVRHEVVHNKFVVDNLRDRGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V +V+ A G + ++ +++ D TCP V+KV V ++ K
Sbjct: 58 ----DELHEVPDDSIVIFSAHGVSKAVQKEAADRGLKVFDATCPLVTKVHMEVTRYAKKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D+ GGE+ +L +
Sbjct: 114 SEVILIGHKGHPEVEGT---MGQY-------------DHSAGGEI---------YLVE-D 147
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+A + +P+ + + +QTT+ +T +V K + +KF N H + IC
Sbjct: 148 EADVQALEPN-NPNALAYVSQTTLSMDDT----AIVIKALRKKFP----NIHGPKTDDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKR-IGPG-NKIAYKLMHGEL 322
ATQ RQDA+ K + + DLILVV G P+ + R +G N AY + + E
Sbjct: 199 YATQNRQDAV-KDLASQCDLILVV------GSPNSSNSNRLRELGERMNAQAYLIDNAEQ 251
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
++ W + +GIT+GAS P+ V+ V+ +V E+ ++L
Sbjct: 252 IDAA-WF-NDETKVGITAGASAPEILVQQVVSRVQELGGAAPVEL 294
>gi|152992144|ref|YP_001357865.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
NBC37-1]
gi|166217484|sp|A6Q7P9.1|ISPH_SULNB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|151424005|dbj|BAF71508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
NBC37-1]
Length = 277
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 151/350 (43%), Gaps = 87/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIA--YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
+K++LA SYGFC+GV+RA++IA ++ K + +IHN RL+E +I
Sbjct: 1 MKIQLASSYGFCFGVKRAIKIAEEHQGSKTY--------GPLIHNKDEINRLKEGF--DI 50
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ E + D V D VV+ G +E+ L + I+D TCP+V+ V +
Sbjct: 51 GLAE---KLDDVTPEDSVVIRTHGIPKDELSQLKAQENPIIDATCPYVTTPQNIVANMSE 107
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y+ +I G H E S+A + AF+ K
Sbjct: 108 KGYSIVIFGDKEHPEIKGVVSYA---------------------------KDLRNAFIVK 140
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ + KG L KV + QTT + E+ K+V ++ V FNT
Sbjct: 141 HEDEL-KGLPI---LSKVAVVAQTTR---KPEDFLKIVNALILNHKEVR-------VFNT 186
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC+AT E QDA ++ ++ D+++V+ I + SY I++E + P
Sbjct: 187 ICNATFENQDAAAELAKD-ADVMVVIGGKHSSNTKQLHSICKSYCDDSYLIENEAELEP- 244
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
W +G+ GI++GASTPD V++V+ K+ +K
Sbjct: 245 ----------------KWF-EGKKLCGISAGASTPDWIVQNVIDKIEALK 277
>gi|403510359|ref|YP_006641997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardiopsis
alba ATCC BAA-2165]
gi|402801237|gb|AFR08647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardiopsis
alba ATCC BAA-2165]
Length = 311
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 151/334 (45%), Gaps = 64/334 (19%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA G+C GV+RAV +A +Q+ I++ +I+HN V + LEE I VEE +
Sbjct: 3 LANPRGYCAGVDRAVITVEKALEQY-GAPIYVRKQIVHNTHVVRTLEERGA--IFVEETE 59
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
+ V +G +VV A G + + ++ +D TCP V+KV ++ D I
Sbjct: 60 E----VPEGAIVVFSAHGVSPAVHEQAEKRRLKTIDATCPLVTKVHKEAKRFASEDRDII 115
Query: 149 IHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G HEE T+ A ++I IV++ +E + V
Sbjct: 116 LIGHIGHEEVEGTSGEAPEHIQIVESPEEVDKV--------------------------- 148
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NT 262
+ DP+ V +QTT+ ET + V+ + E F + +
Sbjct: 149 -EVRDPN----NVSWLSQTTLSVDETNQT-------------VDALRERFPNLLDPPSDD 190
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQDA+ M E +L++VV D S + E + G +Y + + L
Sbjct: 191 ICYATSNRQDAVKAMAPE-CELVIVV--GSDNSSNSVRL-VEVALDAGADASYLIDNAGL 246
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ E WL +G T+G+TSGAS PD V ++L K+
Sbjct: 247 MD-EAWL-EGVTTVGVTSGASVPDILVRELLDKL 278
>gi|383782592|ref|YP_005467159.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Actinoplanes missouriensis 431]
gi|381375825|dbj|BAL92643.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Actinoplanes missouriensis 431]
Length = 325
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAVQ EA K + +++ +I+HN V LE A I VE
Sbjct: 7 RVLLAKPRGYCAGVDRAVQTVEEALKLY-GAPVYVRKQIVHNKHVVSTLE--ARGAIFVE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G VV A G A E +N++ +D TCP V+KV ++ DY
Sbjct: 64 ENYE----VPEGSTVVFSAHGVAPEVHEQARERNLKAIDATCPLVTKVHHEAKRFAAEDY 119
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A +I + ++G + +
Sbjct: 120 DILLIGHEGHEEVIGTSGEAPAHIQL-----------------VDGPDDVENVVVR---- 158
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP KV +QTT+ ET E + +L KT + ++ IC
Sbjct: 159 ------DPS----KVVWLSQTTLSVDETMETVARL--KTRLPLLQSPPSDD-------IC 199
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
AT RQ + K + D+++VV E +G G + + + + ++
Sbjct: 200 YATSNRQHVI-KEIAPDCDVVIVVGSTNSSNSVRLV---EVALGAGARAGHLVDYAAEIQ 255
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL G T+G++SGAS PD+ V +VL + E
Sbjct: 256 DE-WL-AGATTVGVSSGASVPDELVMEVLAHLAE 287
>gi|392946322|ref|ZP_10311964.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Frankia
sp. QA3]
gi|392289616|gb|EIV95640.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Frankia
sp. QA3]
Length = 321
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 146/342 (42%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV + E + +++ +I+HN V + LE A I V+
Sbjct: 3 RVLLAKPRGYCAGVDRAV-VTVEKALELYGSPVYVRKQIVHNLHVVRTLE--AKGAIFVD 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G VV A G A +++ ++ +D TCP VSKV + + + DY
Sbjct: 60 E----TDEVPQGATVVFSAHGVAPTVHEEASSRQLRTIDATCPLVSKVHSEARRFAREDY 115
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE V T A I +V ++A V
Sbjct: 116 DILLIGHEGHEEVVGTTGQAPDRIHLVDGPEDAAKV------------------------ 151
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K DP+ V +QTT+ ET+ K + + G + + IC
Sbjct: 152 ----KVRDPE----HVAFLSQTTLSVDETQTTVKALRERFPHLQGPPS--------DDIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGN 311
ATQ RQ A+ K + VDL++V VE+A D G P ++ +D +
Sbjct: 196 YATQNRQVAV-KEISSAVDLVIVVGSPNSSNSVRLVEVALDAGAPAAHLVDDSTEV---- 250
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+WL +G T+G+TSGAS P++ V V+
Sbjct: 251 -------------DASWL-EGVETVGVTSGASVPEELVTGVM 278
>gi|385208297|ref|ZP_10035165.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. Ch1-1]
gi|385180635|gb|EIF29911.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. Ch1-1]
Length = 319
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 77/354 (21%)
Query: 18 FEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEM 77
+ T ++ LA+ GFC GV+RA++I A K I++ +EI+HN V + L +
Sbjct: 4 MDTTLAETEILLAQPRGFCAGVDRAIEIVERAIK-LHGSPIYVRHEIVHNAYVVEDLRKK 62
Query: 78 AVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV 137
I ++ + V G+ V+ A G + + +++ D TCP V+KV V
Sbjct: 63 GAIFI------ERLEEVPPGNTVIFSAHGVSRAVRSEAETRGLRVYDATCPLVTKVHIEV 116
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE 197
K ++ + ++ G H E T AG + M E + D
Sbjct: 117 AKMRQDGFDIVMIGHKGHPEVEGTMGQAG-----EGMHLVEDIED--------------- 156
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
++ + A DP+ ++ QTT+ ++ +++ + + +
Sbjct: 157 --VQALQLA-----DPE----RIAFVTQTTL---SVDDAAQIIAALKAKYPSIREPKKQ- 201
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
IC ATQ RQDA+ K + + D+++VV E+AE G+P+Y +DS
Sbjct: 202 ----DICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDSPD 256
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+I W+ +G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 257 QI-----------------DAVWV-EGKRRIGVTAGASAPEVLAQAVIARLREL 292
>gi|119897493|ref|YP_932706.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azoarcus sp.
BH72]
gi|166217145|sp|A1K4R4.1|ISPH_AZOSB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|119669906|emb|CAL93819.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Azoarcus sp. BH72]
Length = 312
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 77/345 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N ++ LA GFC GVERA++I A ++F I++ +E++HN V L A +
Sbjct: 3 NNEILLANPRGFCAGVERAIEIVERALQRF-GAPIYVRHEVVHNKFVVDDLR--AKGAVF 59
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE D V G+ V+ A G + + + +++ D TCP V+KV V + ++
Sbjct: 60 VEE----LDEVPTGNTVIFSAHGVSQAVREEADKRGLRVFDATCPLVTKVHIEVGRMREQ 115
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
++ G H E T + +K+ ++ + ++ A L+
Sbjct: 116 GRELVMIGHKGHPEVEGT---------MGQVKDGIHLVE----------TAADVANLQV- 155
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
DPD K+ QTT+ + I + + G + + I
Sbjct: 156 -------ADPD----KLAYVTQTTLSVDDAAAIVTALRERFPNIMGPKK--------DDI 196
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + D++ VV E+AE RG+P+Y +D+ I P
Sbjct: 197 CYATQNRQDAV-KFMTPHADVVFVVGSKNSSNSNRLREVAELRGVPAYLVDNAAGIDPA- 254
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W+ G+ IG+T+GAS P+ V +V++++
Sbjct: 255 ----------------WI-VGKRRIGVTAGASAPEVLVAEVIERL 282
>gi|253997644|ref|YP_003049708.1| hydroxymethylbutenyl pyrophosphate reductase [Methylotenera mobilis
JLW8]
gi|253984323|gb|ACT49181.1| hydroxymethylbutenyl pyrophosphate reductase [Methylotenera mobilis
JLW8]
Length = 337
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 73/349 (20%)
Query: 21 TWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
T + + LA GFC GV+RA+ I +A ++F I++ +E++HN V L A
Sbjct: 15 TPNDAAIVLANPRGFCAGVDRAIIIVEQALEKF-GAPIYVRHEVVHNKFVVDELR--AKG 71
Query: 81 NIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
+ VEE D + G +V+ A G + ++ + D TCP V+KV VEK
Sbjct: 72 AVFVEE----LDEIPTGSIVIFSAHGVSKAVRAEAESRGLTAYDATCPLVTKVHIEVEKM 127
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+K ++ G H E T M + E G+S+T +
Sbjct: 128 RKAGMEIVMIGHKGHPEVEGT------------MGQVEQA----------GNSNTGMYLV 165
Query: 201 EKFKKAVSKGF-DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
E + + DP K+ QTT+ + + LV + KF N +
Sbjct: 166 ETPEDVTALTVKDPS----KLAYVTQTTL----SMDDAALVINALKEKFPQVNAPKS--- 214
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ K++ + DL+++V E+A+++GI +Y +D+ +
Sbjct: 215 -DDICYATQNRQDAV-KIMAQDCDLVIIVGSPNSSNSNRLREVAKNQGIEAYMVDNASYL 272
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P WL + +G+++GAS P+ V++V+ ++
Sbjct: 273 KP-----------------EWLVNKK-KVGVSAGASAPEVLVQEVIAQL 303
>gi|152998222|ref|YP_001343057.1| hydroxymethylbutenyl pyrophosphate reductase [Marinomonas sp.
MWYL1]
gi|150839146|gb|ABR73122.1| hydroxymethylbutenyl pyrophosphate reductase [Marinomonas sp.
MWYL1]
Length = 316
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 83/347 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
++LA GFC GV+RA+ I F E I++ +E++HN V + L+ A + V+E
Sbjct: 5 IQLANPRGFCAGVDRAIDIVNRCLDLF-EAPIYVRHEVVHNKFVVESLK--ARGAVFVDE 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D V ++V+ A G + N+ +++ D TCP V+KV V ++ +
Sbjct: 62 ----LDQVPDDNIVIFSAHGVSKAVRDEATNRGLKVFDATCPLVTKVHLEVLRYSRDGME 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G H E T G+Y D GG + S A +EK +
Sbjct: 118 CVLIGHDGHPEVEGT---MGQY-------------DDRQGGAIYLVESP--ADVEKLEVK 159
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----N 261
+P+ ++ QTT+ +T + ++ + +HF +
Sbjct: 160 -----NPE----RLAFVTQTTLSMDDTSVV-------------IDALRKHFPLIRGPKKD 197
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ + EE +L+LVV E+AE G +Y ID+ I
Sbjct: 198 DICYATQNRQDAVKTLAEES-ELVLVVGSVNSSNSNRLRELAERMGAKAYLIDNASEI-- 254
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +WL KG +IG+T+GAS P+ V +V+ ++
Sbjct: 255 ---------------QCDWL-KGIRSIGVTAGASAPEVLVNEVIDRL 285
>gi|444921164|ref|ZP_21241002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Wohlfahrtiimonas chitiniclastica SH04]
gi|444507900|gb|ELV08074.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Wohlfahrtiimonas chitiniclastica SH04]
Length = 313
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 83/346 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA GFC GV+RA+ I +A +QF I++ +E++HN V L + +
Sbjct: 4 KIYLANPRGFCAGVDRAIGIVEKALEQF-GAPIYVRHEVVHNKFVVDGLRDRGAVFV--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
++ D V +V+ A G A + + + +++ D TCP V+KV V + K
Sbjct: 60 ---QELDEVPDDAIVIFSAHGVAKAVQMEADRRGLKVFDATCPLVTKVHMEVSRDAKNAR 116
Query: 146 TSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+I+ G H E T A+ G+ +V+++K+A+ + +N
Sbjct: 117 DTILIGHAGHPEVEGTMGQFDAAHGGEIYLVEDVKDADNLV-------VN---------- 159
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+PD V QTT+ +T+EI +++ R F V +
Sbjct: 160 -----------NPD----NVSYVTQTTLSIDDTKEI---IDRLRAR-FPVIAAPKK---- 196
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ ++ ++ LI VV E+AE +G +Y ID + I
Sbjct: 197 DDICYATQNRQDAVREL-SKQCSLIFVVGSKNSSNSNRLRELAEKQGAMAYLIDRAEDI- 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ + K IG+T+GAS P+ V++V++
Sbjct: 255 -----------------DLAVLKDHDNIGVTAGASAPEVLVQEVIE 283
>gi|345001825|ref|YP_004804679.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces sp.
SirexAA-E]
gi|344317451|gb|AEN12139.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces sp.
SirexAA-E]
Length = 329
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 149/342 (43%), Gaps = 78/342 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE+ I VE
Sbjct: 11 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRHEIVHNKYVVQTLEKKGA--IFVE 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ + V +G +V+ A G A + + +D TCP V+KV ++ K DY
Sbjct: 68 QTAE----VPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKEDY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A +I + + E + E+ S
Sbjct: 124 DILLIGHDGHEEVIGTSGEAPDHITLVDGPED------VANVEVRDES------------ 165
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
KV +QTT+ ET E +G L +KF N + IC
Sbjct: 166 -------------KVVWLSQTTLSVDETMETVGAL-----KQKFP----NLLSPPSDDIC 203
Query: 265 DATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIP-SYWIDSEKRIGPGNK 312
ATQ RQ A+ K+ EE +I+V VE+A D G P ++ +D I
Sbjct: 204 YATQNRQIAVKKLSEEAELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFADEI----- 258
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL +G T+G+TSGAS PD V+ V++
Sbjct: 259 ------------DEAWL-EGVTTVGLTSGASVPDVLVDGVIE 287
>gi|262401616|ref|ZP_06078182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC586]
gi|262352033|gb|EEZ01163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC586]
Length = 316
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 150/351 (42%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + + +
Sbjct: 58 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKN 113
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ ++ E N S K
Sbjct: 114 MEVVLIGHAGHPEVEGTMGQYASETGGMYLVEKPEDVE-----------NLQSQVK---- 158
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
DP + +QTT+ ET ++ + + + G
Sbjct: 159 -----------DPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 287
>gi|380510665|ref|ZP_09854072.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
sacchari NCPPB 4393]
Length = 316
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 144/357 (40%), Gaps = 74/357 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA GFC GV+RA++I A + I++ +E++HN V L++ I V
Sbjct: 1 MDVLLANPRGFCAGVDRAIEIVKRAIETL-GAPIYVRHEVVHNRFVVDDLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G+ V+ A G A + +++ D TCP V+KV V +H +
Sbjct: 58 EE----LDEVPDGNTVIFSAHGVAQAVRQEAERRGLKVFDATCPLVTKVHFEVARHCRAG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+ + T +L E
Sbjct: 114 RDVVLIGHAGHPEVEGTM------------------------GQWDRECGTGRIYLVEDI 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
++ + +L QTT+ +T I + + G +N + I
Sbjct: 150 EQVATLHVQQPENL---AYTTQTTLSVDDTRGIIEALRARYPAMQGPKN--------DDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ + E DL+LVV E+A G+ SY ID I P
Sbjct: 199 CYATQNRQDAVRDLARE-CDLVLVVGSPNSSNSNRLSELARRDGVESYLIDGADEIDPA- 256
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
W+ G+ +G+T+GAS P V+ V+ ++ E+ + +LA
Sbjct: 257 ----------------WI-AGKRRVGLTAGASAPQVLVDGVIARLRELGADGVSELA 296
>gi|333898943|ref|YP_004472816.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fulva 12-X]
gi|333114208|gb|AEF20722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fulva 12-X]
Length = 314
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 145/351 (41%), Gaps = 83/351 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + N+ +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRNEAANRGLKVFDATCPLVTKVHLEVVRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + + + +
Sbjct: 114 RECILIGHEGHPEVEGT---MGQY-------------DVSNGGAIYLVEDEDDVATLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DP+ + QTT+ +T ++ ++ + F S
Sbjct: 158 -------DPE----NLAFVTQTTLSMDDTSKV-------------IDALRARFPSIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ E D++LVV E+AE G P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLAAE-CDVLLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
K W G IGIT+GAS P+ V V+ K+ E
Sbjct: 253 -----------------KREWF-DGAKGIGITAGASAPEVLVRGVIDKLGE 285
>gi|421142076|ref|ZP_15602052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BBc6R8]
gi|404506470|gb|EKA20464.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BBc6R8]
Length = 315
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 146/350 (41%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
A + +P+ K+ QTT+ +T + ++ + F +
Sbjct: 150 DVAALQVHNPE----KLAFVTQTTLSMDDTSRV-------------IDALRSRFPAIGGP 192
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 193 RKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +W G IGIT+GAS P+ V V++++
Sbjct: 252 M-----------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|111225494|ref|YP_716288.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia alni
ACN14a]
gi|111153026|emb|CAJ64773.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Frankia alni ACN14a]
Length = 344
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 143/342 (41%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV + E + +++ +I+HN V + LE A I V+
Sbjct: 26 RVLLAKPRGYCAGVDRAV-VTVEKALELYGSPVYVRKQIVHNLHVVRTLE--AKGAIFVD 82
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G VV A G A + + ++ +D TCP VSKV + + + DY
Sbjct: 83 E----TDEVPPGATVVFSAHGVAPTVHEEASARQLRTIDATCPLVSKVHSEARRFAREDY 138
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE V T A I +V ++A V
Sbjct: 139 DILLIGHEGHEEVVGTTGQAPDRIHLVDGPEDAAKV------------------------ 174
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K DP+ V +QTT+ ET+ K + + G + + IC
Sbjct: 175 ----KVRDPE----HVAFLSQTTLSVDETQTTVKALRERFPHLQGPPS--------DDIC 218
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIP-SYWIDSEKRIGPGN 311
ATQ RQ A+ K + VDL++V VE+A D G P +Y +D +
Sbjct: 219 YATQNRQVAV-KEISSAVDLVIVVGSPNSSNSVRLVEVALDAGAPAAYLVDDSTEV---- 273
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+WL G T+G+TSGAS P++ V V+
Sbjct: 274 -------------DASWL-DGVETVGVTSGASVPEELVTGVM 301
>gi|410726916|ref|ZP_11365147.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Clostridium sp. Maddingley MBC34-26]
gi|410599891|gb|EKQ54430.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Clostridium sp. Maddingley MBC34-26]
Length = 634
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 68/333 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA++ GFC+GV+RAV+ A +K++ KI+ +IHN V LEE + +I E+
Sbjct: 4 VILAKNAGFCFGVQRAVKEALRIQKEY-NSKIYTLGPLIHNNDVVTFLEENNIFSIEFED 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
K + GDV+V+ + G + + L + + +V+ TCP+V+ + V+K+ K Y
Sbjct: 63 INK----LKTGDVIVIRSHGVSENILNELEKRELTVVNATCPFVTNIQNKVKKYSKEGYH 118
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + CD N + TK+
Sbjct: 119 IVILGDKNHPEVIGINGW----------------CD-------NKAIITKDG-------- 147
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
F+ D+ KV + QTT E K E T+ V+ V ++FNTIC A
Sbjct: 148 ---TFEEDIPQ-KVCVVAQTT-------EKMKNWENTLKNLNSVKEV----LAFNTICAA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T RQ + K+ +E +I++ Y I E +H +E
Sbjct: 193 TDVRQKSTNKISKETDAMIVIGGKNSSNTTKLYQIAKEN--------CQNTIH---IENA 241
Query: 327 NWLPKGQI------TIGITSGASTPDKAVEDVL 353
LP I IG+T+GASTPD + +VL
Sbjct: 242 KELPMDFIKNNNIKKIGVTAGASTPDWIIREVL 274
>gi|171316761|ref|ZP_02905973.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria MEX-5]
gi|171098111|gb|EDT42926.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria MEX-5]
Length = 326
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 81/351 (23%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
N ++ LA+ GFC GV+RA++I A I++ +EI+HN V + L++ I
Sbjct: 14 ANAEILLAQPRGFCAGVDRAIEIVERAIAMH-GAPIYVRHEIVHNKYVVEDLKKKGA--I 70
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE + V G+ V+ A G + + + ++I D TCP V+KV V K ++
Sbjct: 71 FVEE----LEEVPAGNTVIFSAHGVSKAVRDEADVRGLRIYDATCPLVTKVHVEVAKMRQ 126
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G H E T + + M E V D ++K
Sbjct: 127 DGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLVESVED-----------------VQK 164
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEIGKLVEK-TMMRKFGVENVNEHFISF 260
+ A DP+ ++ + QTT+ + E IG L K +R+ ++
Sbjct: 165 LELA-----DPE----RIALVTQTTLSVDDAAEIIGALKSKYPKIREPKKQD-------- 207
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQDA+ K + + D+++VV E+AE RG+ +Y +D+ +I
Sbjct: 208 --ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPDQID 264
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W+ G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 265 PA-----------------WV-AGKRRIGVTAGASAPEVLAQAVIARLREL 297
>gi|419956702|ref|ZP_14472769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae subsp. cloacae GS1]
gi|388608459|gb|EIM37662.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae subsp. cloacae GS1]
Length = 316
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 74/355 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A + + I++ +E++HN V L E I
Sbjct: 1 MQILLANPRGFCAGVDRAISIVENALEIY-GAPIYVRHEVVHNRYVVDSLRERGAIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+Q V G +++ A G + N+++ + D TCP V+KV V + +
Sbjct: 58 ----EQISEVPDGAILIFSAHGVSQAVRNEAKNRDLTVFDATCPLVTKVHMEVARASRRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
SI+ G H E T G+Y N + Y+ + S ++ F K
Sbjct: 114 EESILIGHAGHPEVEGT---MGQY---SNPEGGMYLVE-----------SPEDVFTLNVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
F QTT+ +T ++ + + + G + IC
Sbjct: 157 NEARLSF-----------MTQTTLSVDDTSDVIDALRQRFPKIVGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+A+ + + E+ D++LVV E+A+ G ++ ID I
Sbjct: 198 YATTNRQEAV-RALAEQADVVLVVGSKNSSNSNRLAELAQRMGKAAFLIDDATDI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+E W+ K + +G+T+GAS PD V++V+ ++ E+ EA+ L
Sbjct: 252 ------------QEAWV-KNAVCVGVTAGASAPDILVQNVIARLQELGGGEAVPL 293
>gi|434381849|ref|YP_006703632.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli WesB]
gi|404430498|emb|CCG56544.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli WesB]
Length = 577
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 53/332 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV++ + GFC GV+ AV+ + + E+I++ +IHNP LE+ V+
Sbjct: 1 MKVEIGKFAGFCDGVKYAVEKTFSQASK-SNEEIYVDGHLIHNPQTLDMLEKTGVKT--Y 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + V++ V++ A G + E L+N +IV+ TC +V+K+ V+KH
Sbjct: 58 EDTEDDMSVLDDKTVII-RAHGISPERREALSNHAKKIVNLTCKYVAKIQALVKKHSSLG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y I+ G +H E + FA +V K+ +EK
Sbjct: 117 YRVIVIGNPTHPEIIGVCGFAQDVYVV-----------------------YKDEDIEKL- 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+ D K I QTT+ K E K V + + K+ N I NTIC
Sbjct: 153 --------PEDD-KKTLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT++RQ+ + + ++ D++LV+ +E + + +I K ++ + E +E
Sbjct: 196 EATEQRQNEILD-IAKRNDVVLVIGGSESSNTRNLY-----KIASSIKPSFYVEFKEDLE 249
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K + P +GI +GASTPD +ED+ + +
Sbjct: 250 KIDLTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|188586255|ref|YP_001917800.1| hydroxymethylbutenyl pyrophosphate reductase [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350942|gb|ACB85212.1| hydroxymethylbutenyl pyrophosphate reductase [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 705
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 81/356 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWI--TNEIIHNPTVNKRLEEMAV--- 79
+++ +A+ GFC GV RA+ +A + I + I+HN V + L E +
Sbjct: 1 MEILVAKGAGFCSGVNRALDKTIQAVQTDTSRDIQVFTLGPIVHNKEVIQNLTEKGIGII 60
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN-KNVQIVDTTCPWVSKVWTSVE 138
+N+ + KK + VV+ + G E LNN N ++D TCP+V KV
Sbjct: 61 ENLTQLQSKKCLSE-ETNNYVVIRSHGVGPETFKMLNNLSNTDVIDATCPFVRKVQQKAS 119
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
K + Y I G +H E + IV +++ E V D +
Sbjct: 120 KLYQDGYQIFIVGDPNHPEVKGIKEWTDNNAIV--IEKPEQVNDIEISN----------- 166
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
K + QTT+ + E+ ++VEK + R N + I
Sbjct: 167 --------------------KTAVVAQTTLRE---EKFNEIVEKILDR-------NPNTI 196
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
NTICDATQ+RQ A ++ + VD+++VV E+A G+P+Y I++ K
Sbjct: 197 VHNTICDATQKRQTATKELAGQ-VDVMIVVGGYNSSNTKKLKELAVKEGVPTYHIETAKE 255
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
+ K +W G IG+T+GASTPD +++V+ K+ E + +
Sbjct: 256 L-----------------KTDWFL-GCKKIGVTAGASTPDWTIKEVVGKMREFEEQ 293
>gi|424790685|ref|ZP_18217198.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|422797877|gb|EKU26067.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. graminis ART-Xtg29]
Length = 316
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 144/357 (40%), Gaps = 74/357 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA GFC GV+RA++I A + I++ +E++HN V L++ I V
Sbjct: 1 MDVLLANPRGFCAGVDRAIEIVKRAIETL-GAPIYVRHEVVHNRFVVDDLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G+ V+ A G + + +++ D TCP V+KV V +H +
Sbjct: 58 EE----LDEVPDGNTVIFSAHGVSQAVRQEAERRGLKVFDATCPLVTKVHFEVARHCRAG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+ N T +L E
Sbjct: 114 RDVVLIGHAGHPEVEGTM------------------------GQWNRERCTGRIYLVEDI 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
++ + +L QTT+ +T I + G +N + I
Sbjct: 150 EQVATLDIQQPENL---AYTTQTTLSVDDTRGIIDALRARYPAMQGPKN--------DDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ + + DL+LVV E+A G+ SY ID + I P
Sbjct: 199 CYATQNRQDAVRDLARQ-CDLVLVVGSPNSSNSNRLSELARRDGVESYLIDGAEEIDPA- 256
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
W+ G+ IG+T+GAS P V+ V+ ++ E+ + +LA
Sbjct: 257 ----------------WI-AGKRRIGLTAGASAPQVLVDGVIARLRELGADGVGELA 296
>gi|73667144|ref|YP_303160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia canis
str. Jake]
gi|72394285|gb|AAZ68562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia canis
str. Jake]
Length = 319
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 157/356 (44%), Gaps = 87/356 (24%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPE-EKIWITNEIIHNPTVNKRLEEMAVQNI 82
NV+V LA GFC GV RA++I A K K+++ +EI+HN + L+EM V I
Sbjct: 8 NVEVILANPRGFCAGVSRAIEIVELAIKYHSNNRKVYVLHEIVHNKYIINSLKEMGVLFI 67
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
D G +++ A G + +E + L +N++I++ TCP V+KV V+ +
Sbjct: 68 DT------LDQAEDGSILIYSAHGVSKEIEHLAQL--RNLEIINATCPLVTKVHKEVQSY 119
Query: 141 KKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
+ Y I+ G H E T ++V+ + + + +
Sbjct: 120 DREGYQIILIGHKGHREVEGTIGQITTPVLLVQTISDIDNI------------------- 160
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
AV V+ K+ QTT+ +T+EI + K + +KF N
Sbjct: 161 ------AV-------VNQNKLAYVTQTTLSVDDTKEI---INK-LKQKFP----NIKGPD 199
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQ+A+ K + E VD++ ++ E+A+ + P++ IDS K I
Sbjct: 200 LKDICYATQNRQNAV-KQLSELVDIVFILGSKNSSNSNRLKELAKLKA-PAFLIDSYKEI 257
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV---LKKVFEIK 360
L+ VEK IGIT+GAS P+ + +V LK+ IK
Sbjct: 258 D------LSLLQN--VEK----------IGITAGASAPEILITEVIDSLKQHLNIK 295
>gi|331006478|ref|ZP_08329779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC1989]
gi|330419703|gb|EGG94068.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC1989]
Length = 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 143/346 (41%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
V+VKLA GFC GV+RA+ I A + I++ +E++HN V L + I V
Sbjct: 3 VQVKLANPRGFCAGVDRAIDIVNRALDVY-GPPIYVRHEVVHNKFVVDSLRDRGA--IFV 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D V +V+ A G A + + + D TCP V+KV V K+ +
Sbjct: 60 DE----LDEVPDDKIVIFSAHGVAKAVKNDAERRELTVFDATCPLVTKVHLEVTKYSQDG 115
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA--FLEK 202
I+ G H E T G+Y D+ GG++ ++ + K
Sbjct: 116 TECILIGHQGHPEVEGT---MGQY-------------DHANGGDIYLVEDEQDVDNLVVK 159
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+A+S QTT+ +T + V + KF N +
Sbjct: 160 NPEALS-------------YVTQTTLSMDDTAK----VIAALRAKFP----NIEGPRTDD 198
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ E DL+LVV E+AE G +Y ID+ I P
Sbjct: 199 ICYATQNRQDAVKQLALE-CDLVLVVGSPNSSNSNRLRELAERCGTEAYLIDTADDINPA 257
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL Q +IG+T+GAS PD ++ V+ +
Sbjct: 258 -----------------WLNAKQ-SIGVTAGASAPDILIQQVIAAL 285
>gi|254192370|ref|ZP_04898809.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
gi|169649128|gb|EDS81821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
Length = 335
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 79/346 (22%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
N++V LA+ GFC GV RA++I A +Q +++ +EI+HN V + L + +
Sbjct: 22 NMRVILAQPRGFCAGVVRAIEIVERALQQN-GAPVYVRHEIVHNRHVVENLRNKGARFV- 79
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
++ D V G V + A G A + + ++D TCP V+KV ++
Sbjct: 80 -----EELDEVPHGAVAIFSAHGVAQTVEQDAQARGLDVLDATCPLVTKVHVQGRQYVAA 134
Query: 144 DYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
I+ G H E T + I+V++ E + L + T A++
Sbjct: 135 GRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAEVDT---------LTLPADTPVAYV-- 183
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
QTT+ +T I + +++ G + +
Sbjct: 184 ---------------------TQTTLSVDDTRGIIEALQRRFTDIVGPDTRD-------- 214
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQ A+ ++ E+VD++LVV EI + G+PSY + G
Sbjct: 215 ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNSNRLREIGTESGVPSYLVAD------G 267
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++ + W + T+G+T+GAS P++ VEDV+ +
Sbjct: 268 SEV-----------RAEWFANAR-TVGLTAGASAPEEMVEDVIAAL 301
>gi|303232061|ref|ZP_07318764.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica ACS-049-V-Sch6]
gi|401680092|ref|ZP_10812016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
ACP1]
gi|429759352|ref|ZP_19291851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica KON]
gi|302513167|gb|EFL55206.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica ACS-049-V-Sch6]
gi|400219219|gb|EJO50090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
ACP1]
gi|429179628|gb|EKY20867.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
atypica KON]
Length = 632
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 89/345 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LAE++GFC+GV+RAV++A EA + K + IIHNP V RLE V P+
Sbjct: 1 MEIILAENHGFCYGVKRAVEMANEAADS--DGKSYTLGPIIHNPQVVGRLESKGVS--PI 56
Query: 85 EEGKKQFDVVNKGDVVVLP-AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+E +++G +++ G A+ E K + I+D TCP V K + +
Sbjct: 57 QE----VSDIDEGTMIIRSHGVGPAIYE--EAEEKGLNILDATCPHVKKAQQDAKSVIED 110
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
T +I G+ +H E + +A K II+++ + A+
Sbjct: 111 GMTLVILGEKNHPEVKSINLWANNKGIIIEDEESAK------------------------ 146
Query: 203 FKKAVSKGFDPDVDLV-KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
++ +V K+G+ QTT + + I +++EK +++ F
Sbjct: 147 -----------NLQVVEKMGVVVQTTFSQFKFNSIIEILEKK----------SKNLKIFK 185
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
TIC+ATQERQ++ ++ VDL++V+ E+ D G +Y I++ +
Sbjct: 186 TICNATQERQNSAVELA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL-- 242
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ---------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|224372941|ref|YP_002607313.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nautilia
profundicola AmH]
gi|254806911|sp|B9L9K5.1|ISPH_NAUPA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|223589852|gb|ACM93588.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nautilia
profundicola AmH]
Length = 276
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 147/336 (43%), Gaps = 72/336 (21%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK 89
A+SYGFC+GV+RAV+IA E++ +IHNP +RL +N V+ +
Sbjct: 6 AKSYGFCFGVKRAVEIAEESQNAVT------LGPLIHNPLEIERL----AKNYNVKYVET 55
Query: 90 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSII 149
D+ V++ G +++ L KNV+I+D TCP+V K VE+ K Y +I
Sbjct: 56 IEDIDENVKRVIVRTHGIPKDKLQNLKEKNVEIIDATCPFVKKPQEIVEEMSKQGYDIVI 115
Query: 150 HGKYSHEETVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
G +H E S++ + +V + KE E G L +T
Sbjct: 116 FGDKNHPEIQGVMSYSVHNRVYVVLDPKELE-------GIRLKEHIAT------------ 156
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
QTT K+ + + + ++N E + FNTIC+AT
Sbjct: 157 ---------------VAQTTR---------KINDYLKITNYLIQNYKEVRV-FNTICNAT 191
Query: 268 QERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 327
E QDA+ ++ +K D+++++ + IA + LVE E
Sbjct: 192 FENQDAVRELA-KKADIMIIIGGKNSSNTKQLY-----------NIAKEFCEAYLVESEE 239
Query: 328 WLPK----GQITIGITSGASTPDKAVEDVLKKVFEI 359
L K G+ GI++GASTP+ VE ++ ++ E+
Sbjct: 240 ELKKEWFEGKKHCGISAGASTPEWLVEKIISRIKEL 275
>gi|163802407|ref|ZP_02196300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
AND4]
gi|159173708|gb|EDP58523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
AND4]
Length = 321
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 72/344 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 62 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+Y +E Y++ A +E+ K
Sbjct: 118 MEVVLIGHAGHPEVEGTM---GQY-------SSETGGMYLV---------ETPADVEQLK 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
V DP DL V +QTT+ ET ++ + + + G + IC
Sbjct: 159 AIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPEIQGPRK--------DDIC 203
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ + VD+++VV E+AE G P Y D + I P
Sbjct: 204 YATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP--- 259
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G++ +G+T+GAS P++ V +L+++
Sbjct: 260 --------------EWF-EGKVKVGVTAGASAPEELVNQILERI 288
>gi|453049162|gb|EME96780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 444
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 153/330 (46%), Gaps = 54/330 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV +A +Q+ +++ +EI+HN V K LE+ I V+
Sbjct: 122 KVLLAAPRGWCAGVDRAVIAVEKALEQY-GAPVYVRHEIVHNKYVVKTLEKKGA--IFVD 178
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E F+V +G++V+ A G A + +D TCP V+KV ++ + DY
Sbjct: 179 E---TFEV-PEGNIVIFSAHGVAPVVHEEAARGKLATIDATCPLVTKVHKEAVRYAREDY 234
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A +I + ++G +
Sbjct: 235 DILLIGHEGHEEVIGTSGEAPDHIQL-----------------VDGPQDVANVEVR---- 273
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DPD KV +QTT+ ET E +G L KF N + IC
Sbjct: 274 ------DPD----KVVWLSQTTLSVDETMETVGAL-----KNKFP----NLLSPPSDDIC 314
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ KM E DL++VV + + E +G G + A+ + + E ++
Sbjct: 315 YATQNRQTAVKKMGAE-ADLVIVV---GSKNSSNSVRLVEVALGAGARAAHLVDYAEEID 370
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL +G T+G+TSGAS P+ VE VL+
Sbjct: 371 -EAWL-EGVSTVGVTSGASVPEILVEGVLE 398
>gi|224824627|ref|ZP_03697734.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudogulbenkiania
ferrooxidans 2002]
gi|347538645|ref|YP_004846069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudogulbenkiania sp. NH8B]
gi|224603120|gb|EEG09296.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudogulbenkiania
ferrooxidans 2002]
gi|345641822|dbj|BAK75655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudogulbenkiania sp. NH8B]
Length = 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 149/353 (42%), Gaps = 77/353 (21%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ LA GFC GV+RA+ I A + + I++ +E++HN V L + I
Sbjct: 5 IMLANPRGFCAGVDRAIAIVERALELY-GAPIYVRHEVVHNRFVVDNLRDKGAIFI---- 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ V +G +V A G + + + + D TCP V+KV V++ +
Sbjct: 60 --EDLADVPRGATLVYSAHGVPLSVRQEAEERGLTVYDATCPLVTKVHVEVKRMHQAGME 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
I+ G H E T G+++G E+ + A
Sbjct: 118 IIMIGHAGHPEVEGTM------------------------GQVDGDMYLVESVADVATLA 153
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
V +PD K+ +QTT+ ET +I + +R + N + + IC A
Sbjct: 154 VK---NPD----KLAYVSQTTLSVDETRDI---IAALRVRFPAIANPKK-----DDICYA 198
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
TQ RQDA+ K++ E+ DL++VV E+A +G+ +Y +D+ + P
Sbjct: 199 TQNRQDAV-KVLAEQCDLVIVVGSPNSSNSNRLREVAALKGVEAYMVDNATLLEP----- 252
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
W +G+ +G+T+GAS P+ V+ V+ ++ E+ + +L
Sbjct: 253 ------------QWF-EGKSRVGVTAGASAPEVLVQAVITRIRELGADSVTEL 292
>gi|254482802|ref|ZP_05096039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2148]
gi|214036883|gb|EEB77553.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2148]
Length = 316
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 151/357 (42%), Gaps = 75/357 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V+LA GFC GV+RA+ I A + F I++ +E++HN V + L A + V
Sbjct: 1 MDVQLANPRGFCAGVDRAIDIVNRALEVF-GAPIYVRHEVVHNKFVVEDLR--ARGAVFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V +V+ A G + + + +++ D TCP V+KV V K+
Sbjct: 58 DE----LEEVPDDCIVIFSAHGVSQAVRKEADRRQLKVFDATCPLVTKVHMEVAKYSAAG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+ N +S +E
Sbjct: 114 RECVLIGHAGHPEVEGTM------------------------GQYNRASGGDIYLVEDES 149
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFG-VENVNEHFISFNTI 263
+A S D K+ QTT+ +T LV + ++F +E + N I
Sbjct: 150 QASSLNV---ADPGKLSYVTQTTLSMDDT----ALVIDALRQRFPHIEGPRK-----NDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + DL+LVV E+AE G ++ +D + I P
Sbjct: 198 CYATQNRQDAV-KQLAADCDLMLVVGSPNSSNSNRLRELAERMGAEAHLLDGAQDIDP-- 254
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
W+ KG+ IG+T+GAS P+ V++V+ + + E +++A
Sbjct: 255 ---------------RWV-KGKRRIGVTAGASAPEVLVQEVIDGLRALGAEAPIEVA 295
>gi|182415463|ref|YP_001820529.1| hydroxymethylbutenyl pyrophosphate reductase [Opitutus terrae
PB90-1]
gi|238692918|sp|B1ZXD4.1|ISPH_OPITP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|177842677|gb|ACB76929.1| hydroxymethylbutenyl pyrophosphate reductase [Opitutus terrae
PB90-1]
Length = 289
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 144/352 (40%), Gaps = 86/352 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQI----AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80
+KV A+S GFCWGVERA++I A++ RK ++ +IHN + ++L E ++
Sbjct: 1 MKVLRAKSAGFCWGVERAIEITRDYAHQGRK-----PVYTDGPLIHNRQMMEKLSEEGIR 55
Query: 81 NIPVEEGKKQFDV----VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTS 136
+ + + V + V+V+ A G + E L + + D TCP V +
Sbjct: 56 EVGDYQSRANIAVNPAAPGENPVMVVRAHGISPERRNYLKSLGMDFKDATCPDVGIIAGK 115
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
+ H K Y +II G +H E + + E G T
Sbjct: 116 IRLHAKKGYATIIFGDKNHPEAIGLLGYT----------------------EGRGYCITS 153
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
+A ++ L +V + +Q+TM E E+ + + KF +
Sbjct: 154 KADIDALPA-----------LERVCMVSQSTMFMHEFAELSEYARQ----KF------KE 192
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
+ F+TIC AT++RQ + + + I+V+ +A + +P+Y I++
Sbjct: 193 VLVFDTICQATKDRQTDVVALARQGAQAIVVIGGHHSANTVKLASLARLQNLPTYHIETA 252
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ P + + IG+T+GASTP+ + +V K+
Sbjct: 253 AELSPEEMKKFTV------------------IGVTAGASTPEFLISEVCAKL 286
>gi|374334778|ref|YP_005091465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanimonas sp.
GK1]
gi|372984465|gb|AEY00715.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanimonas sp.
GK1]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 74/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A ++F I++ +E++HN V +L++ +
Sbjct: 1 MEILLANPRGFCAGVDRAISIVQSALEKF-GAPIYVRHEVVHNRYVVNKLKDAGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V ++V+ A G + N+ +++ D TCP V+KV V + +
Sbjct: 58 ----DELDQVPDDNIVIFSAHGVSKAVREEAKNRGLKVFDATCPLVTKVHMEVHRASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y + GG + A LE +
Sbjct: 114 IETILIGHAGHPEVEGT---MGQY-------------ESTEGGMYLVENPADVAALEVKQ 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
PD + QTT+ ET ++ ++ R +E + + IC
Sbjct: 158 --------PD----NLTFVTQTTLSVDETSDV---IDALRARFPTIEGPRK-----DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ KVDL+LVV E+AE G ++ ID + I P
Sbjct: 198 YATQNRQDAVRELA-AKVDLMLVVGSRNSSNSNRLRELAEKIGTEAHLIDCVEMIEP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL +G IG+T+GAS P+ V++V+ +
Sbjct: 254 --------------VWL-EGAARIGVTAGASAPEVLVQEVISHL 282
>gi|338811526|ref|ZP_08623740.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Acetonema longum DSM 6540]
gi|337276493|gb|EGO64916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Acetonema longum DSM 6540]
Length = 654
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 148/354 (41%), Gaps = 82/354 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K++LAE GFC+GV+RA+ +A E KI+ +IHNP V RL Q I V
Sbjct: 1 MKIQLAEHMGFCFGVKRAIDLAQENANDHTG-KIYTLGPLIHNPQVVSRLSR---QGIAV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E D +N+G V++ + G E K + IVD TCP V K + +
Sbjct: 57 AE---NIDAINQG-TVIIRSHGVGPEVYRRAEAKGLTIVDATCPHVKKAQQAAARLAASG 112
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y II G H E + ++AG IV +E + A L F
Sbjct: 113 YQVIILGDADHPEVKSIIAWAGSDPIVIGSEE-------------------QAAELPVFP 153
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K+G+ QTT + E+ + + K ++ TIC
Sbjct: 154 --------------KLGVVAQTTF----SIELFDCILAVLQTKCQEIQID------RTIC 189
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ K+ + VD+++VV ++ G+ +Y I++ +
Sbjct: 190 TATDMRQQTARKLAGQ-VDVMVVVGGKNSANTTHLADLCRQTGVKTYHIETASEL----- 243
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
K++W +G +GIT+GASTP +E+V + ++++++ L+
Sbjct: 244 ------------KQHWF-EGARQVGITAGASTPQWIIEEVYTTMQQMEQDDRLK 284
>gi|319956087|ref|YP_004167350.1| hydroxymethylbutenyl pyrophosphate reductase [Nitratifractor
salsuginis DSM 16511]
gi|319418491|gb|ADV45601.1| hydroxymethylbutenyl pyrophosphate reductase [Nitratifractor
salsuginis DSM 16511]
Length = 286
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 99/356 (27%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA SYGFC+GV+RA++IA E P + +IHN RL
Sbjct: 1 MKIKLASSYGFCYGVKRAIKIAEE----HPGSATY--GPLIHNKDEIDRL---------- 44
Query: 85 EEGKKQFDV--------VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTS 136
K FD+ + D +V+ G E+ L + +I++ TCP+V+
Sbjct: 45 ---KSSFDIGLVESFGEAEQVDSIVIRTHGIPKNELKMLKAEGKEIINATCPYVTTPQQI 101
Query: 137 VEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
VE+ + Y+ ++ G +H E S+A ++ ++A V +
Sbjct: 102 VERMSREGYSIVVFGDRNHPEIKGVVSYA------EDPRDAFVVLE-------------- 141
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
E+ LE KV + QTT + EI V ++R V
Sbjct: 142 ESELESLPLK-----------SKVAVVAQTTRKPADFLEI---VNALVLRAKEVR----- 182
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
FNTIC+AT E QDA ++ +E D+++V+ I ++ SY I++E
Sbjct: 183 --VFNTICNATFENQDAAAELAKE-ADMMIVIGGKHSSNTKQLHSICKNYCEESYLIENE 239
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 360
+ P W +G+ GI++GASTPD V++V+ ++ EI+
Sbjct: 240 NELDPA-----------------WF-EGKELCGISAGASTPDWVVQNVIARIREIE 277
>gi|421743613|ref|ZP_16181666.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Streptomyces sp. SM8]
gi|406687990|gb|EKC91958.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Streptomyces sp. SM8]
Length = 332
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 64/335 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE I VE
Sbjct: 13 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GSPIYVRHEIVHNKYVVQTLERKGA--IFVE 69
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +V+ A G A + + +D TCP V+KV + + DY
Sbjct: 70 ETAE----VPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRFAQDDY 125
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE + T+ A +I +V ++ E V E+ S
Sbjct: 126 DILLIGHEGHEEVIGTSGEAPDHITLVDGPEDVENV-------EVRDDS----------- 167
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
KV +QTT+ ET E V+ + E F
Sbjct: 168 --------------KVVWLSQTTLSVDETMET-------------VDRLKEKFPQLISPP 200
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ +M + DL++VV S + E +G G + A+ +
Sbjct: 201 SDDICYATQNRQIAVKQM-GGQADLVIVV--GSKNSSNSVRL-VEVALGAGARDAHLVDF 256
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E ++ E WL +G T+G+TSGAS PD VE VL+
Sbjct: 257 AEEID-EAWL-EGVSTVGVTSGASVPDVLVEGVLE 289
>gi|383788101|ref|YP_005472669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caldisericum
exile AZM16c01]
gi|381363737|dbj|BAL80566.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caldisericum
exile AZM16c01]
Length = 284
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 151/340 (44%), Gaps = 70/340 (20%)
Query: 20 YTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV 79
+ G + +A+S+GFC GVERAV I +Q + ++ + I+HN RLE + V
Sbjct: 2 HNKGRRTIIVAKSFGFCSGVERAVSIVENLARQ--SKGVFTVDSILHNEREMARLEALGV 59
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK 139
K + + G++V+LPA GA E+ L ++ +I+D TCP+V + ++K
Sbjct: 60 ---------KILNPNDSGEIVILPAHGATDIEVENLKSRFKKIIDVTCPFVIRTVNIIKK 110
Query: 140 HKKGDYTSIIHGKYSHEETVATASFAGK--YIIVKNMKEAEYVCDYILGGELNGSSSTKE 197
K Y +I G+ H ET AG+ + ++ +++E
Sbjct: 111 LKSEGYKIVIVGEKGHRETKVLKETAGESLFAVISDLEE--------------------- 149
Query: 198 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
L +F+K K+ + +Q+T+ +G + ++ + K F
Sbjct: 150 --LAQFEKEY---------FSKIALVSQSTVSRGLSIDVSQFFLKHAF----------EF 188
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
F+T+C T +RQ+ +++ + VD ++VV + + KRI
Sbjct: 189 RFFDTVCPETVKRQEEA-EVLAKSVDCVVVVGGKHSANTNRLY-EIAKRINE-------- 238
Query: 318 MHGELVEKENWLPKGQIT----IGITSGASTPDKAVEDVL 353
+ VE + L K I+ IGI SG STP+ +++++
Sbjct: 239 -NALFVEDVDELRKFDISRCLKIGIVSGTSTPEYIIKEIV 277
>gi|72160875|ref|YP_288532.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermobifida
fusca YX]
gi|71914607|gb|AAZ54509.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermobifida
fusca YX]
Length = 333
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 150/350 (42%), Gaps = 90/350 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RA+ +A +Q+ I++ +I+HN V + LEE V I VE
Sbjct: 8 RVLLAKPRGYCAGVDRAIHTVEKALEQY-GPPIYVRKQIVHNTHVVRTLEERGV--IFVE 64
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G VV A G + + + ++ +D CP V+KV ++ D
Sbjct: 65 ETSE----VPEGATVVFSAHGVSPQVHKEAAERKLRTIDAACPLVTKVHKEAQRFAAEDL 120
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G HEE T+ A ++I IV + +E +
Sbjct: 121 DIILIGHEGHEEVEGTSGHAPEHIQIVDSPEEVANI------------------------ 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
K DP+ +V +QTT+ ET V+ + E F +
Sbjct: 157 ----KVRDPN----RVAWLSQTTLSVDETNAT-------------VQALRERFPNLIDPP 195
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKR 306
+ IC AT RQ A+ K + + DL +V VE+A D G SY +D+
Sbjct: 196 SDDICYATSNRQAAV-KAIAPQCDLFIVVGSSNSSNSVRLVEVARDAGARASYLVDNATY 254
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ KE WL +G TIG++SGAS P+ V ++L+++
Sbjct: 255 L-----------------KEEWL-EGVTTIGVSSGASVPEILVRELLERL 286
>gi|52425804|ref|YP_088941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mannheimia
succiniciproducens MBEL55E]
gi|71152188|sp|Q65RQ4.1|ISPH_MANSM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|52307856|gb|AAU38356.1| LytB protein [Mannheimia succiniciproducens MBEL55E]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 144/347 (41%), Gaps = 74/347 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I E + I++ +E++HN V L E + V
Sbjct: 1 MKIILANPRGFCAGVDRAISI-VELALEIHGAPIYVRHEVVHNRFVVNGLRERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + V G +V+ A G + N+N+++ D TCP V+KV V + +
Sbjct: 58 EE----LNEVPDGAIVIFSAHGVSQAVRQEAKNRNLKVFDATCPLVTKVHMQVARASRKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG +E +
Sbjct: 114 TKAILIGHEGHPEVQGT---MGQY-------------DNPEGGIF---------LVENVE 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G + +L QTT+ +T ++ ++ G N IC
Sbjct: 149 DIAKLGLKDNEELT---FMTQTTLSIDDTSDVIVALKAKYPAIQGPRK--------NDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ A+ ++ E+ DL++VV E+A G+P+ ID I P
Sbjct: 198 YATTNRQQAVRELAEQS-DLVIVVGSKNSSNSNRLAELASRMGVPAKLIDDSNDIEP--- 253
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+WL KG TIG+T+GAS P+ V+ V+ ++ E+
Sbjct: 254 --------------DWL-KGINTIGVTAGASAPEVLVQSVIARLKEL 285
>gi|170758634|ref|YP_001787128.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A3 str. Loch Maree]
gi|169405623|gb|ACA54034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A3 str. Loch
Maree]
Length = 638
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ A K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQAAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|336432555|ref|ZP_08612390.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 2_1_58FAA]
gi|336018892|gb|EGN48629.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 284
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 54/331 (16%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
VK A++ GFC+GV+RAV+ YE K I+ IIHN V K LE Q + V
Sbjct: 3 VKRAKTAGFCFGVKRAVETVYEQAKNSDAAPIYTYGPIIHNEEVVKDLEN---QGVIVLR 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+++ + + +G V++ + G A L K +QIVD TCP+V K+ V +
Sbjct: 60 TEQELEQLTEG-TVIIRSHGVAKYIYEKLEKKKIQIVDATCPFVKKIHRIVNRESAAGKQ 118
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G H E +AG+ + V KE A
Sbjct: 119 IVIIGNPKHPEVEGIRGWAGEQVFVVETKE----------------------------DA 150
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
S DP V + QTT + +++ +++ K + + V NTIC A
Sbjct: 151 ASLVLDP---ARAVCVVAQTTFNYNKFQDLVEIISK---KSYDVS-------VLNTICGA 197
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T+ERQ + EE VD ++V+ + +++K + + ++
Sbjct: 198 TRERQTEARSIAEE-VDAMIVIG-------DKHSSNTQKLFEICKGACKDTYYIQTLDDL 249
Query: 327 NWLPKGQI-TIGITSGASTPDKAVEDVLKKV 356
+ G + T+GIT+GASTP+ +E+V V
Sbjct: 250 DLNQLGSVETVGITAGASTPNNIIEEVQNNV 280
>gi|331694831|ref|YP_004331070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudonocardia
dioxanivorans CB1190]
gi|326949520|gb|AEA23217.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudonocardia
dioxanivorans CB1190]
Length = 319
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LA+ G+C GV+RAV+ +A +Q +++ +I+HN V + L E I V+
Sbjct: 8 RILLAKPRGYCAGVDRAVEAVEKALEQH-GAPVYVRKQIVHNVHVVETLTERGA--IFVD 64
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G +VV A G + ++ ++ +D TCP V+KV V++ + DY
Sbjct: 65 E----TDEVPPGSIVVFSAHGVSPAVRQQAEDRELRTIDATCPLVTKVHGEVKRFAREDY 120
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ GE G+ ++ +
Sbjct: 121 DILLVGHRGHEEVEGTS------------------------GEAPGNVQLVDSAADVASV 156
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V DPD KV +QTT+ ET E V + E F +
Sbjct: 157 TVR---DPD----KVVWLSQTTLSVDETMET-------------VAALRERFPTLQNPPS 196
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M DL+LVV A E + G +Y + +
Sbjct: 197 DDICYATQNRQIAVKAMAPH-CDLVLVVGSANSSNSVRLV---EVALAAGAGASYLIDYA 252
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ E+WL +G T+G+TSGAS P+ V VL+ + E
Sbjct: 253 RQID-ESWL-EGVTTVGVTSGASVPEVLVRGVLEHLGE 288
>gi|340360866|ref|ZP_08683330.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 448 str. F0400]
gi|339882895|gb|EGQ72784.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 448 str. F0400]
Length = 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 150/341 (43%), Gaps = 58/341 (17%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA G+C GV+RAV +A + I++ EI+HN V + L +
Sbjct: 22 KILLAAPRGYCAGVDRAVDAVEQALAHY-GAPIYVRKEIVHNKYVVEALSRRGAIFV--- 77
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV A G + ++++ +D TCP V+KV + K DY
Sbjct: 78 ---SKTDEVPEGARVVFSAHGVSPAVHARAEARHLRTIDATCPLVTKVHKQAIRFAKDDY 134
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G HEE T A + I V +NG +
Sbjct: 135 DIILVGHTGHEEVEGTQGEAPERIQV-----------------VNGPHEVDAVTVR---- 173
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI--SFNTI 263
DP+ KV +QTT+ ET E +L+ + +F H + I
Sbjct: 174 ------DPE----KVVWISQTTLSVDETMETVRLLRE----RF------PHLADPPADDI 213
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMHGEL 322
C ATQ RQ A+ K + +VD+++VV G S + E + G +AY++ +
Sbjct: 214 CYATQNRQGAV-KTIAPRVDVMVVV----GSGNSSNSVRLKEVALEAGAPVAYRVDYARE 268
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+E E+W G T+G+TSGAS P+ V +V++++ E+ +E
Sbjct: 269 LE-ESWF-AGANTVGLTSGASVPEILVREVVERLGEMGFDE 307
>gi|395763678|ref|ZP_10444347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Janthinobacterium lividum PAMC 25724]
Length = 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 79/341 (23%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA+ GFC GV+RA++I A +QF I++ +EI+HN V L I
Sbjct: 7 LAQPRGFCAGVDRAIEIVERALQQF-GAPIYVRHEIVHNAYVVADLRNKGAIFI------ 59
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
D V G+ +V A G + ++ + I D TCP V+KV V K ++ I
Sbjct: 60 DDLDDVPAGNTLVFSAHGVSKAVRAEAESRGLSIFDATCPLVTKVHMEVGKMRREGREII 119
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK-AV 207
+ G H E T M +AE +G L +E A
Sbjct: 120 MIGHDGHPEVEGT------------MGQAE------MGMHL----------VETLDDVAA 151
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDAT 267
+ +PD + +QTT+ +T +I K N+ E IC AT
Sbjct: 152 LQVANPD----SLAYVSQTTLSVDDTSDI------IAALKAKYPNIAEP--KKGDICYAT 199
Query: 268 QERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIAY 315
RQ+A+ K + +V++++VV E+AE G P+Y +D+ +I P
Sbjct: 200 TNRQEAV-KFMAPQVEVVIVVGSPNSSNSNRLREVAEKMGTPAYMVDNASQIDPA----- 253
Query: 316 KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
WL +G++ +G+T+GAS P+ V+ V++++
Sbjct: 254 ------------WL-EGKLRVGVTAGASAPEVLVQAVIERL 281
>gi|282856369|ref|ZP_06265648.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pyramidobacter
piscolens W5455]
gi|282585740|gb|EFB91029.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pyramidobacter
piscolens W5455]
Length = 293
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 137/346 (39%), Gaps = 74/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ +A G C+GV+RA+ +A Q ++ IHNP +RL++M ++ +
Sbjct: 1 MKILVAAPTGLCFGVKRAIGFVEKALAQ--TAPVYALGSPIHNPQEVERLQKMGLRVVQS 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E + G ++ A GAA + L +NV ++D TCP+V + +
Sbjct: 59 E------TEIPAGATALIRAHGAAPGVLENLRKRNVSVIDGTCPFVRAAQGHARELSEAG 112
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G H ETV + G + G S+ F
Sbjct: 113 YHVLILGNEKHPETVG------------------------IRGYVRGPSTVISTIPSLFS 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ F V + K+G+ +QTT EE V + +NTIC
Sbjct: 149 STI---FKSSVKIHKLGLVSQTTQ-----EE-----SLLAEAAKAALGVADELRIYNTIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIPSYWIDSEKRIGPGNKI 313
AT ERQ+A+ ++ + +I++ IA D + WI+
Sbjct: 196 RATIERQEAVRRLASQVEGMIVIGGHNSANTGKLCRIARDSSCDAVWIEHA--------- 246
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
G+L W+ + ++ IGI +GASTPD +E + + I
Sbjct: 247 ------GQL--DRRWVLEKRV-IGIAAGASTPDWLIEQLHNAIHNI 283
>gi|418054740|ref|ZP_12692796.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
gi|353212365|gb|EHB77765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
Length = 309
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 147/357 (41%), Gaps = 81/357 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA+ GFC GV RA++I A E +++ +EI+HN V L+ + +
Sbjct: 1 MKIILAQPRGFCAGVVRAIEIVERALATG-EGPVYVRHEIVHNRHVVDSLKAKGAKFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D + V + A G + + +N+ ++D TCP V+KV +++
Sbjct: 58 ----EDLDEIPSDAVAIFSAHGVSRDVEDGAAKRNLNVIDATCPLVTKVHNQGQRYSSLG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T G +V+N ++ LN T A++
Sbjct: 114 RTVILIGHAGHAEVEGTLGRITGPVYLVENREDVL---------NLNIPDDTPIAYI--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ +T + + V+ G E + I
Sbjct: 162 --------------------TQTTLSVDDTRQTIEAVKARFSDVIGPETRD--------I 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ A+ + V+++LVV EI E+ G+PSY + +I P
Sbjct: 194 CYATQNRQTAVRNLCGH-VEVLLVVGSANSSNSNRLREIGEECGVPSYLVADGGQIDP-- 250
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE--ALQ 366
WL G+ TIGIT+GAS P+ V+DV+ + ++ E ALQ
Sbjct: 251 ---------------RWL-AGKETIGITAGASAPEVLVDDVIGALAKLGSVEIKALQ 291
>gi|400537583|ref|ZP_10801105.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
colombiense CECT 3035]
gi|400328627|gb|EJO86138.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
colombiense CECT 3035]
Length = 308
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 141/340 (41%), Gaps = 72/340 (21%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LAE G+C GV+RAV+ A K+ +++ +EI+HN V LE+ +
Sbjct: 3 LAEPRGYCAGVDRAVETVERALKKH-GPPVYVRHEIVHNRHVVTTLEKAGAVFV------ 55
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ D V +G +VV A G A +N+ +D TCP V+KV + + DY +
Sbjct: 56 EETDEVPEGAIVVFSAHGVAPTVHAAAAERNLHTIDATCPLVTKVHNEARRFARNDYDIL 115
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
+ G HEE V TA A ++ + ++G ++ + K V
Sbjct: 116 LIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVAAVDNVTVRDENKVV- 157
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTI 263
+QTT+ ET EI VE + E F + I
Sbjct: 158 -------------WLSQTTLSVDETMEI-------------VERLRERFPKLQDPPSDDI 191
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M E +L++VV +S + + H LV
Sbjct: 192 CYATQNRQVAVKAMAPE-CELVIVVGSRNSS-------NSVRLVEVALGGGAAAAH--LV 241
Query: 324 E-----KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ WL +G T+G+TSGAS P+ VE VL ++ E
Sbjct: 242 DWADDIDPAWL-EGVTTVGVTSGASVPEVLVEGVLSRLAE 280
>gi|256822878|ref|YP_003146841.1| hydroxymethylbutenyl pyrophosphate reductase [Kangiella koreensis
DSM 16069]
gi|256796417|gb|ACV27073.1| hydroxymethylbutenyl pyrophosphate reductase [Kangiella koreensis
DSM 16069]
Length = 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 84/347 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + LA GFC GV+RA++I A + F I++ +E++HN V L E I
Sbjct: 1 MDIVLANPRGFCAGVDRAIEIVNRAIEIFGA-PIYVKHEVVHNKFVVDGLREKGAVFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + V + ++ A G + + +N+++ D TCP V+KV V +H + +
Sbjct: 58 ----EDLNDVPENATLIFSAHGVSQQVRHEAKERNLKVFDATCPLVTKVHMEVSRHSRRN 113
Query: 145 YTSIIHGKYSHEETVATA-----SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
++ G H E T + AG Y++ A+ E+N ++S
Sbjct: 114 EECVLIGHKGHPEVEGTMGQYDNTGAGIYLVEDEQDVAQL--------EVNDANS----- 160
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T+ +LV K + KF N
Sbjct: 161 --------------------LFYVTQTTLSVDDTQ---RLV-KALQAKFP----NIQGPK 192
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ E DLILVV E+AE++G SY I++ I
Sbjct: 193 KDDICYATQNRQDAVKQLAAE-CDLILVVGAQNSSNSSRLQELAENQGCRSYLINNATEI 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+WL G +G+T+GAS P+ V+DV+K
Sbjct: 252 -----------------DSSWL-NGVNKVGVTAGASAPEILVQDVIK 280
>gi|167842322|ref|ZP_02469006.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis MSMB43]
Length = 313
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 143/345 (41%), Gaps = 79/345 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V + L + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVERALQQH-GAPVYVRHEIVHNRHVVENLRNKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V G V + A G A + + ++D TCP V+KV ++ D
Sbjct: 58 ----EELDEVPHGAVAIFSAHGVAQTVEKDAEARGLDVLDATCPLVTKVHVQGRQYVAAD 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E T + I+V++ E + L + T A++
Sbjct: 114 RRLILIGHAGHPEVEGTIGQIPAEVILVQSEAEVDT---------LTLPADTPVAYV--- 161
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
QTT+ +T I + + + G + I
Sbjct: 162 --------------------TQTTLSVDDTRGIIEALHRRFTDIVGPDT--------RDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ A+ ++ E+VD++LVV EI + G+PSY + G+
Sbjct: 194 CYATQNRQAAVREL-SEQVDVLLVVGATNSSNSNRLREIGTESGVPSYL------VADGS 246
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+I + W + +G+T+GAS P++ VEDV+ +
Sbjct: 247 EI-----------RAEWFASAR-AVGLTAGASAPEEMVEDVIAAL 279
>gi|262163903|ref|ZP_06031642.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM223]
gi|262027431|gb|EEY46097.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM223]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVAT----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E T AS G +V+ ++ E N S K
Sbjct: 114 MEVVLIGHAGHPEVEGTMGQYASDTGGMYLVEKPEDVE-----------NLQSQVK---- 158
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
DP + +QTT+ ET ++ + + + G
Sbjct: 159 -----------DPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 287
>gi|182418532|ref|ZP_02949820.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
butyricum 5521]
gi|237667880|ref|ZP_04527864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182377624|gb|EDT75172.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
butyricum 5521]
gi|237656228|gb|EEP53784.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 634
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 149/349 (42%), Gaps = 101/349 (28%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA + GFC+GV+RAV A +KQ+ +KI+ +IHN V LE+ V +I +E+
Sbjct: 4 VILANNSGFCFGVKRAVDEAINIQKQY-NKKIYTLGPLIHNNDVVSYLEDNNVFSIELED 62
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
++ DV+V+ + G + + + L ++ + +V+ TCP+V+ + V+K+ + Y
Sbjct: 63 ----ISNLDPKDVIVIRSHGVSKDVLAMLESRGLTVVNATCPFVTNIQKKVKKYSEEGYH 118
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G H E V + C+ N ++ TK
Sbjct: 119 IVILGDEKHPEVVGINGW----------------CN-------NDATITK---------- 145
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH------FISF 260
D ++D+ E E V +T +K +N EH +SF
Sbjct: 146 -----DGNIDI--------------ELPEKVCAVAQTTEKKKNWDNTVEHLKDAKELLSF 186
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
NTIC AT RQ + Y + ++VD ++V+ G + KL H
Sbjct: 187 NTICAATDVRQKSTYDL-SKQVDAMIVIG------------------GKNSSNTTKLYH- 226
Query: 321 ELVEKENW-----------LPKGQIT-----IGITSGASTPDKAVEDVL 353
+ KEN LPK I IG+T+GASTPD + +VL
Sbjct: 227 --IAKENCEHTIHIENIKDLPKDFINNDIKKIGVTAGASTPDWIIREVL 273
>gi|449144131|ref|ZP_21774948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
CAIM 602]
gi|449080231|gb|EMB51148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
CAIM 602]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----HLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 287
>gi|392953666|ref|ZP_10319220.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrocarboniphaga effusa AP103]
gi|391859181|gb|EIT69710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrocarboniphaga effusa AP103]
Length = 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 154/356 (43%), Gaps = 73/356 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA++I A +Q I++ +E++HN V + L + V
Sbjct: 1 MEILLANPRGFCAGVDRAIEIVERALEQL-GAPIYVRHEVVHNRFVVESLRNKGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +G V + A G + + + + + + D TCP V+KV V+++ +
Sbjct: 58 EE----VDQVPEGAVCIFSAHGVSQQVRQDASARKLTVFDATCPLVTKVHIEVKRYSREG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G++ D GG ++ + + +
Sbjct: 114 REVVLIGHAGHPEVEGT---MGQF-------------DESQGGRIHLVETPDDVQTLPIR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K + QTT+ ++ ++++ R + + + IC
Sbjct: 158 KPEHMAY-----------VTQTTL---SMDDTARVIDALRARFPMISGPRK-----DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQD++ K + + D++LVV E+AE RG P++ ID I P
Sbjct: 199 YATQNRQDSV-KDLAAQCDVLLVVGSRNSSNSNRLRELAESRGTPAWLIDGPDDIQP--- 254
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
W+ G++ +G+T+GAS P+ V+ V+ ++ E+ A +LA
Sbjct: 255 --------------EWM-NGKLRVGVTAGASAPEVLVQQVVGRLKELGGSVAKELA 295
>gi|285017719|ref|YP_003375430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
albilineans GPE PC73]
gi|283472937|emb|CBA15442.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Xanthomonas albilineans GPE PC73]
Length = 316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 147/362 (40%), Gaps = 84/362 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA GFC GV+RA++I A + I++ +E++HN V L++ I V
Sbjct: 1 MHVLLANPRGFCAGVDRAIEIVKRAIETL-GAPIYVRHEVVHNRFVVDDLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G+ V+ A G + + +++ D TCP V+KV V +H +
Sbjct: 58 EE----LDEVPDGNTVIFSAHGVSQAVRQEAERRGLKVFDATCPLVTKVHFEVARHCRAG 113
Query: 145 YTSIIHGKYSHEETVATAS------FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
++ G H E T +G+ +V++M++ A
Sbjct: 114 RDVVLIGHAGHPEVEGTMGQWDRERGSGRIYLVEDMEQV--------------------A 153
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
LE + + QTT+ +T I + + G +N
Sbjct: 154 TLEVQQPQ------------NLAYTTQTTLSVDDTYGIIEALRARYPVMQGPKN------ 195
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ + + DL+LVV E+A G+ SY ID
Sbjct: 196 --DDICYATQNRQDAVRDLARQ-CDLVLVVGSPNSSNSNRLSELARRDGVESYLIDGASE 252
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
I P W+ G+ IG+T+GAS P V+ V+ ++ E+ E +
Sbjct: 253 IDPA-----------------WV-AGKRRIGLTAGASAPQVLVDGVIARLRELGAEGVSE 294
Query: 367 LA 368
LA
Sbjct: 295 LA 296
>gi|410615723|ref|ZP_11326739.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola
psychrophila 170]
gi|410164760|dbj|GAC40628.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola
psychrophila 170]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 163/353 (46%), Gaps = 59/353 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A + FP I++ +E++HN V L+E + V
Sbjct: 1 MQIHLANPRGFCAGVDRAITIVERALEMFPA-PIFVRHEVVHNKFVVDGLKERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E V +V+ A G + N++ +++ D TCP V+KV V + K
Sbjct: 58 DE----LSEVPDDSIVIFSAHGVSQAVRTEANSRGLKVFDATCPLVTKVHMEVMRASKKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y D + GG + S ++ K K
Sbjct: 114 TECILIGHHGHPEVEGT---MGQY-------------DNVDGG-IYLVESVEDVAALKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D K+ +QTT+ +T ++ ++ ++ ++ + + IC
Sbjct: 157 -----------DSSKLYYCSQTTLSVDDTADV---IDALRLQFPAIQGPRK-----DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQD++ ++ + DL+LVV A++ + + ++IG AY + + ++
Sbjct: 198 YATQNRQDSVRELSSD-CDLLLVVG-AQNSSNSNRLRELAEKIG---ATAYLIADADCIQ 252
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE---------IKREEALQLA 368
K +WL + IG+T+GAS P+ V+ V+ ++ E + REE ++ A
Sbjct: 253 K-SWLENAK-NIGVTAGASAPEILVQGVVNRLKEWGATATIERVGREENIEFA 303
>gi|420156930|ref|ZP_14663770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
MSTE9]
gi|394756940|gb|EJF39999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
MSTE9]
Length = 665
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 65/339 (19%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ--NIPV 84
+ +A+S GFC+GV+RAVQ+ + + ++++ IIHNP + + LEE V+ + P
Sbjct: 3 IHVAKSAGFCFGVDRAVQMVFRLLDE--GKQVYTLGPIIHNPQIVQELEERGVRIVDTPA 60
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E V +V+ + G A ++ + ++ D TCP+V K+ V + +
Sbjct: 61 E--------VPPDGTLVIRSHGVARAVQEDISGRGLECADATCPFVRKIHKIVSRACEAG 112
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G SH E + A YV + EL LEK
Sbjct: 113 QTVLIAGDASHPEIEGVIGYCAA---------APYV--FRNAAELRD-------LLEKH- 153
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+ KV + QTT EE G ++ +++K V + F TIC
Sbjct: 154 --------PEFSNQKVCVIAQTTF---SLEEWGNCLQ--ILKK-----VCTNADVFATIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT +RQ + +K DL+LV+ G S + + + Y L+E
Sbjct: 196 NATVQRQSEASDLA-QKSDLMLVI-----GGRHSSNTAKLRDVCAQSCTTY------LIE 243
Query: 325 KENWLP----KGQITIGITSGASTPDKAVEDVLKKVFEI 359
K +P K ++IGIT+GASTP +++VL + EI
Sbjct: 244 KAEEIPSQAVKKAVSIGITAGASTPASIIKEVLDTMTEI 282
>gi|387891990|ref|YP_006322287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens A506]
gi|423689859|ref|ZP_17664379.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens SS101]
gi|387160589|gb|AFJ55788.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens A506]
gi|388001900|gb|EIK63229.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens SS101]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 151/346 (43%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DASNGGAI---------YLVEDE 148
Query: 205 KAVS--KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K V+ + +PD ++ QTT+ +T + + +T G ++
Sbjct: 149 KDVANLQVHNPD----RLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD------- 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM--- 252
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W G IGIT+GAS P+ V V++++
Sbjct: 253 --------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|398782887|ref|ZP_10546539.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
auratus AGR0001]
gi|396996425|gb|EJJ07417.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
auratus AGR0001]
Length = 343
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 56/330 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV +A +Q+ +++ +EI+HN V K LE+ I VE
Sbjct: 25 KVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPVYVRHEIVHNKYVVKTLEKKGA--IFVE 81
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G++V+ A G A + +D TCP V+KV ++ K DY
Sbjct: 82 ETEE----VPEGNIVIFSAHGVAPVVHEEAKRGKLASIDATCPLVTKVHKEAVRYAKEDY 137
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A ++I + ++G +
Sbjct: 138 DILLIGHEGHEEVIGTSGEAPEHITL-----------------VDGPDDVANVEVR---- 176
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS--FNTI 263
DPD +V +QTT+ V++TM ++ + +S + I
Sbjct: 177 ------DPD----RVVWLSQTTL----------SVDETMETVDALKGRYPNLLSPPSDDI 216
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ +M E DL++VV + + E +G G + A+ + + E +
Sbjct: 217 CYATQNRQTAVKQMGAE-ADLVIVV---GSKNSSNSVRLVEVALGAGARAAHLVDYAEEI 272
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ E WL +G T+G+TSGAS P+ V VL
Sbjct: 273 D-EAWL-EGVGTVGVTSGASVPEILVHGVL 300
>gi|416999072|ref|ZP_11939741.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
parvula ACS-068-V-Sch12]
gi|333977225|gb|EGL78084.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella
parvula ACS-068-V-Sch12]
Length = 632
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 83/342 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA+++GFC+GV+RAV++A EA + K + IIHNP V RLE+ V PV
Sbjct: 1 MEIILAKNHGFCYGVKRAVEMANEAANN--DGKSYTLGPIIHNPQVVGRLEDKGVS--PV 56
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E D+ ++ G A+ E K + +VD TCP V K +
Sbjct: 57 QEVS---DIAEGTMIIRSHGVGPAIYE--EAEEKGLHVVDATCPHVKKAQQDAKSVIDEG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
T +I G+ +H E + +A I+ +E S+ K +EK
Sbjct: 112 MTLVILGEKNHPEVKSINLWANNEGIIIEDEE----------------SAQKLQVVEKM- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
G+ QTT + + I ++EK +++ F TIC
Sbjct: 155 ----------------GVVVQTTFSQFKFNSIIDILEKK----------SKNLKVFKTIC 188
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ++ + VDL++V+ E+ D G +Y I++ +
Sbjct: 189 NATQERQNSAVDLA-RNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETSTEL----- 242
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ W + Q T+G+T+GASTPD +++V++
Sbjct: 243 ------------QLEWFNRVQ-TVGVTAGASTPDWIIKEVIE 271
>gi|398992543|ref|ZP_10695508.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM21]
gi|398136844|gb|EJM25922.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM21]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + ++ +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAASRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ +P+ K+ QTT+ +T ++++ R + + + I
Sbjct: 150 DVGALQVHNPE----KLAFVTQTTLSMDDTS---RVIDALRARFPAIGGPRK-----DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|384567328|ref|ZP_10014432.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora glauca K62]
gi|384523182|gb|EIF00378.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora glauca K62]
Length = 334
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 147/338 (43%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A +++ I++ EI+HN V + L + V I V+
Sbjct: 20 RVLLAKPRGYCAGVDRAVVTVEKALEKY-GAPIYVRKEIVHNKHVVETLRKRGV--IFVD 76
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +VV A G + +N++ +D TCP V+KV V + + DY
Sbjct: 77 ETSE----VPEGALVVFSAHGVSPAVHAEAAARNLRTIDATCPLVTKVHKEVNRFARDDY 132
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A + + + E
Sbjct: 133 DILLIGHEGHEEVEGTAGEAPDRVQLVDTPE----------------------------- 163
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DVD V V ++ L T V++TM R V + E F
Sbjct: 164 --------DVDKVTVRDPSKVVWLSQTTLS----VDETMER---VRQLKERFPELADPPS 208
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC AT RQ A+ M E DL+LVV R + E + G K A+ + +
Sbjct: 209 DDICYATSNRQSAVKAMAAE-CDLVLVV---GSRNSSNSKRLVEVALQAGAKDAHLIDYA 264
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V++E WL + TIG+TSGAS PD V ++L + E
Sbjct: 265 REVDEE-WLQDVE-TIGVTSGASVPDVLVLELLDHLAE 300
>gi|225791080|gb|ACO31284.1| PtmM1 [Streptomyces platensis]
Length = 448
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 149/357 (41%), Gaps = 91/357 (25%)
Query: 19 EYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA 78
E G+ V LA FC GV+RA++I A Q+ +++ +I+HN V +E++A
Sbjct: 119 EAAKGDRAVALAAPRSFCAGVDRAIEIVERALDQY-GAPVYVRKQIVHNRHV---VEDLA 174
Query: 79 VQN-IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV 137
+ + VEE D V +G++VV A G A ++++++D TCP V+KV
Sbjct: 175 RRGAVFVEE----LDEVPEGELVVFSAHGVAPAVRDAAGERDLRVIDATCPLVTKVHAEA 230
Query: 138 EKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
++ T ++ G HEE T A + ++V+N EA
Sbjct: 231 KRFAGRGDTVVLIGHAGHEEVEGTLGEAPDRTVLVQNAVEA------------------- 271
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
A LE DP+ V QTT+ E E+ E +
Sbjct: 272 -ARLEV--------EDPEA----VSFLMQTTLAMSEATEVA-------------EALAGR 305
Query: 257 FISFNT-----ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSY 299
F S IC A+ RQ A+ + + +VDL+LVV E+AE G P+
Sbjct: 306 FPSIKAPQSEDICYASTNRQRAVEE-IAGRVDLLLVVGSPNSSNSVRLKELAERMGTPAQ 364
Query: 300 WIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+D + + + +HG IG+T+GAS PD V++++ +
Sbjct: 365 LVDD------ASDVVLEQLHGAR------------RIGLTAGASAPDALVQEIVANL 403
>gi|374705452|ref|ZP_09712322.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
S9]
Length = 318
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-SPPIYVRHEVVHNKFVVEDLR--ARGAVFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQTVRAEADRRGLKVFDATCPLVTKVHMEVGRYSREG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + K+ +EK +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DDSNGGAIYLVEDEKD--VEKLE 155
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD + QTT+ +T ++ ++ + F +
Sbjct: 156 VR-----NPDA----LAFVTQTTLSMDDTSKV-------------IDALRSKFPAIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ E D++LVV E+AE G P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLAAE-CDVLLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K+ W G IGIT+GAS P+ V V+ ++
Sbjct: 253 -----------------KQEWF-AGVDGIGITAGASAPEVLVRGVIAQL 283
>gi|291451500|ref|ZP_06590890.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
albus J1074]
gi|291354449|gb|EFE81351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
albus J1074]
Length = 332
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 64/335 (19%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE I VE
Sbjct: 13 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GSPIYVRHEIVHNKYVVQTLERKGA--IFVE 69
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +V+ A G A + + +D TCP V+KV + + DY
Sbjct: 70 ETAE----VPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRFAQDDY 125
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE + T+ A +I +V ++ E V E+ S
Sbjct: 126 DILLIGHEGHEEVIGTSGEAPDHITLVDGPEDVENV-------EVRDDS----------- 167
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
KV +QTT+ ET E V+ + E F
Sbjct: 168 --------------KVVWLSQTTLSVDETMET-------------VDRLKEKFPQLISPP 200
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ +M + DL++VV S + E +G G + A+ +
Sbjct: 201 SDDICYATQNRQIAVKQM-GGQADLVIVV--GSKNSSNSVRL-VEVALGAGARDAHLVDF 256
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E ++ E WL +G T+G+TSGAS PD VE VL+
Sbjct: 257 AEEID-EAWL-EGVGTVGVTSGASVPDVLVEGVLE 289
>gi|390570084|ref|ZP_10250356.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|420250143|ref|ZP_14753369.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
gi|389937971|gb|EIM99827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|398062359|gb|EJL54137.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 142/342 (41%), Gaps = 79/342 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRRKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G A + + ++D TCP V+KV ++ G
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVAQSVERDAEQRGLDVLDATCPLVTKVHVQGRQYVGGG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ EA + K
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQS-----------------------EAEVAKL 150
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ + D L V QTT+ +T I +++ G + I
Sbjct: 151 ELPI------DTPLAYV---TQTTLSVDDTRGIIDALKRRFPDIVGPDT--------RDI 193
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQ A+ ++ +VD++LVV EI + G+PS+ + + P
Sbjct: 194 CYATQNRQAAVREL-STQVDVLLVVGATNSSNSNRLREIGSETGVPSFLVADGSEVKP-- 250
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W + T+GIT+GAS P++ VE+V+
Sbjct: 251 ---------------EWFATVK-TVGITAGASAPEEMVENVI 276
>gi|258654507|ref|YP_003203663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nakamurella
multipartita DSM 44233]
gi|258557732|gb|ACV80674.1| hydroxymethylbutenyl pyrophosphate reductase [Nakamurella
multipartita DSM 44233]
Length = 326
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 148/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ +++ +I+HN V LE I VE
Sbjct: 11 RVLLASPRGYCAGVDRAVVTVEKALEQY-GPPVYVRKQIVHNKHVVATLESRGA--IFVE 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G++VV A G + + +Q++D TCP V+KV + DY
Sbjct: 68 E----TDEVPEGEIVVFSAHGVSPAVHEQAARRQLQVIDATCPLVTKVHKEARRFAAEDY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T A + I +L +S +A +
Sbjct: 124 DILLIGHRGHEEVEGTHGEAPEAI------------------QLINDASDVDAVTVR--- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
DP+ KV +QTT+ ET +G + + ++F + + IC
Sbjct: 163 ------DPE----KVIWLSQTTLSVDET--LGTV--DLLRKRFPLMTSPPS----DDICY 204
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH-GELVE 324
ATQ RQ+ + K + DL++VV S + E +G G AY + GE+
Sbjct: 205 ATQNRQE-VVKQIAADCDLVIVVGSTNSSN--SVRL-VEVALGAGADTAYLVDDAGEI-- 258
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL G T+G+TSGAS PD VE VL + E
Sbjct: 259 DEAWL-DGVHTVGVTSGASVPDDLVEGVLAHLQE 291
>gi|343500558|ref|ZP_08738449.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
tubiashii ATCC 19109]
gi|418477102|ref|ZP_13046238.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
gi|342820128|gb|EGU54957.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
tubiashii ATCC 19109]
gi|384575297|gb|EIF05748.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
Length = 317
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 74/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+KLA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKIKLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 58 EE----LHEVPDDNIVIFSAHGVSQAVRKEAKERDLTVFDATCPLVTKVHMEVARASRKH 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVK-NMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
++ G H E T G+Y + M E D + + E+
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQYASEQGGMYLVETPADVV-------------SLKEQV 157
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K DP + +QTT+ ET ++ + + + G + I
Sbjct: 158 K-------DPS----HLHYVSQTTLSVDETADVIEELRRVFPDIQGPRK--------DDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ +M + VD+++VV E+AE G P Y D + I P
Sbjct: 199 CYATQNRQDAVREMATD-VDVVIVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIEP-- 255
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G++ +G+T+GAS P++ V +L ++
Sbjct: 256 ---------------KWF-EGKVRVGVTAGASAPEELVNKILDRI 284
>gi|120405583|ref|YP_955412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vanbaalenii PYR-1]
gi|166217176|sp|A1TE06.1|ISPH_MYCVP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|119958401|gb|ABM15406.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vanbaalenii PYR-1]
Length = 337
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A ++ I++ +EI+HN V L + +
Sbjct: 28 RVLLAEPRGYCAGVDRAVETVERALEKH-GAPIYVRHEIVHNRYVVDTLAKAGAIFV--- 83
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+Q D V +G +VV A G A ++++ +D TCP V+KV ++ + DY
Sbjct: 84 ---EQTDEVPEGAIVVFSAHGVAPTVHEEAAARHLRTIDATCPLVTKVHNEAKRFARDDY 140
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE V TA A ++ V + +A
Sbjct: 141 DILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA---------------------------- 172
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
VD V V N+ L T + + +E V + E F +
Sbjct: 173 ---------VDKVTVRDPNKVIWLSQTTLSVDETMET-------VRRLREKFPTLQDPPS 216
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E LV+ + S + E +G G A+ + +
Sbjct: 217 DDICYATQNRQVAVKAMAPE---CELVIVVGSKNSSNSVRL-VEVALGAGASAAHLVDYA 272
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ ++ W G T+G+TSGAS P+ V VL ++ E
Sbjct: 273 DDIDPA-WF-DGVTTVGVTSGASVPEILVRGVLDRLAE 308
>gi|406705724|ref|YP_006756077.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [alpha
proteobacterium HIMB5]
gi|406651500|gb|AFS46900.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [alpha
proteobacterium HIMB5]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 65/348 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ L+ GFC GVERA++I ++ K+F +++ +EI+HN V L + I V
Sbjct: 6 IKILLSAPRGFCAGVERAIEIVEKSLKKF-GSPVYVRHEIVHNKYVVDDLRKKGA--IFV 62
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ +K V+ A G +N N+ +D TCP VSKV E K
Sbjct: 63 EELD---EIEDKSRPVIFSAHGVPKSVPAQADNYNINYIDATCPLVSKVHREAENLNKAG 119
Query: 145 YTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+ I+ G +H E + T G ++++ +EA+ +Y L
Sbjct: 120 FHIILIGHKNHPEVIGTMGQLPVGSIDLIQDKEEAQ---NYDLE---------------- 160
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
D K+ QTT+ +T++I K+++K ++ E S +
Sbjct: 161 -------------DGRKLAYVTQTTLSVDDTKDIIKILKKRY------PDIKEP--SKDD 199
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQ A+ K + +K D+ V+ + + ++ K G + AY L
Sbjct: 200 ICYATTNRQMAV-KNIAKKCDMFFVIG-SRNSSNSVRLVEVAK--NSGCEKAY------L 249
Query: 323 VEKENWLPKGQI----TIGITSGASTPDKAVEDV---LKKVFEIKREE 363
V E+ +P I TIGI+SGAS PD V+D LK+ F + EE
Sbjct: 250 VHSESKVPYDDINKCSTIGISSGASAPDILVDDFINQLKQKFSVVTEE 297
>gi|365860492|ref|ZP_09400298.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
sp. W007]
gi|364010052|gb|EHM30986.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
sp. W007]
Length = 326
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 143/344 (41%), Gaps = 82/344 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE+
Sbjct: 8 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRHEIVHNKYVVQTLEK--------- 57
Query: 86 EGKKQFDV---VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+G DV V +G +V+ A G A + + +D TCP V+KV ++ K
Sbjct: 58 KGAIFVDVTAEVPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAK 117
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE + T+ A +I + + E
Sbjct: 118 EDYDILLIGHEGHEEVIGTSGEAPDHITLVDGPE-------------------------- 151
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
DV VKV ++ L T + + +E K N+ +
Sbjct: 152 -----------DVANVKVRDESKVVWLSQTTLSVDETMETVDAIKAKFPNLLSP--PSDD 198
Query: 263 ICDATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIP-SYWIDSEKRIGPG 310
IC ATQ RQ A+ K+ E+ +I+V VE+A D G P ++ +D I
Sbjct: 199 ICYATQNRQIAVKKLAEDAELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFADEI--- 255
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL +G T+G+TSGAS PD V+ VL+
Sbjct: 256 --------------DEAWL-EGVTTVGLTSGASVPDVLVDGVLE 284
>gi|104783643|ref|YP_610141.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
entomophila L48]
gi|122401810|sp|Q1I4S8.1|ISPH_PSEE4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|95112630|emb|CAK17358.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas
entomophila L48]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 145/349 (41%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + K+ + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DASNGGSIYLVEDEKDVAALQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
+PD + QTT+ +T + ++ + E F +
Sbjct: 158 -------NPD----HLAFVTQTTLSMDDTSRV-------------IDALRERFPNIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W Q IGIT+GAS P+ V V+ ++
Sbjct: 253 -----------------QRSWFDGAQ-RIGITAGASAPEVLVRGVIDQL 283
>gi|90423234|ref|YP_531604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB18]
gi|90105248|gb|ABD87285.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB18]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 151/355 (42%), Gaps = 83/355 (23%)
Query: 20 YTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV 79
Y ++V LA+ GFC GV RA++I A +++ +++ +EI+HN V + L+ A
Sbjct: 2 YNVRPLEVFLAQPRGFCAGVVRAIEIVERALEKY-GPPVYVRHEIVHNKYVVESLK--AK 58
Query: 80 QNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSV 137
I VE+ V V V A G A VEE + + +++ TCP V+KV
Sbjct: 59 GAIFVED----LSEVPPQAVTVFSAHGVARSVEEEAA--ARGLPVLNATCPLVTKVHNQG 112
Query: 138 EKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
+++ I+ G H E V T G ++V+N+++ L + T
Sbjct: 113 KRYMSKGRALILIGHAGHPEVVGTMGQVPGPVLLVQNVEDV---------AALTLPADTP 163
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
A++ QTT+ +T++I + ++F +
Sbjct: 164 VAYI-----------------------TQTTLSVDDTKDI----IAALAQRFS----DIQ 192
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
IC ATQ RQ A+ + + VDLILVV EI + GIPSY I
Sbjct: 193 GPDIRDICYATQNRQSAVRDL-SKLVDLILVVGATNSSNSNRLREIGTEVGIPSYLIADG 251
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ P +WL KG +GIT+GAS P+ V+DV++ + I
Sbjct: 252 SELNP-----------------DWL-KGVKAVGITAGASAPEVLVDDVIEALRRI 288
>gi|58617260|ref|YP_196459.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ehrlichia
ruminantium str. Gardel]
gi|58416872|emb|CAI27985.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
[Ehrlichia ruminantium str. Gardel]
Length = 332
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 84/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEIIHNPTVNKRLEEMAVQNIP 83
V+V LA GFC GV RA++I A + + + K I++ +EI+HN + + L+ M V I
Sbjct: 17 VEVILATPRGFCAGVSRAIEIVKLAIEYYKDTKTIYVLHEIVHNKYIVETLKTMGVIFI- 75
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ D G V++ A G + ++++ L ++++++D TCP V+KV V+ +
Sbjct: 76 -----DKVDQAQDGSVLIYSAHGVSKSIKQLAEL--RDLEVIDATCPLVNKVHKEVQLYD 128
Query: 142 KGDYTSIIHGKYSHEETVATA-SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K Y I+ G H E T + IIV+N+ + + +
Sbjct: 129 KSGYQVILIGHKGHREVEGTVGQISTPVIIVQNLNDIDKI-------------------- 168
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ FDPD K+ QTT+ +T K++ + +KF N
Sbjct: 169 --------EIFDPD----KLAYVTQTTLSVDDT----KVIIDKLKKKFP----NIKGPDL 208
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV---------EIAEDRGIPS--YWIDSEKRIGP 309
IC ATQ RQ K + E VD++ ++ + E I + + IDS K I
Sbjct: 209 KDICYATQNRQTTT-KRLAELVDIVFILGSKNSSNSNRLKELAAIQTQAFLIDSYKEIDL 267
Query: 310 GNKIAYKLMHGELVEKENWLPKGQIT-IGITSGASTPDKAVEDVL 353
N L IT IGIT+GAS PD V+ V+
Sbjct: 268 -----------------NLL--NDITKIGITAGASAPDILVQQVI 293
>gi|71152180|sp|Q5FFL5.2|ISPH_EHRRG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Length = 328
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 84/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEK-IWITNEIIHNPTVNKRLEEMAVQNIP 83
V+V LA GFC GV RA++I A + + + K I++ +EI+HN + + L+ M V I
Sbjct: 13 VEVILATPRGFCAGVSRAIEIVKLAIEYYKDTKTIYVLHEIVHNKYIVETLKTMGVIFI- 71
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ D G V++ A G + ++++ L ++++++D TCP V+KV V+ +
Sbjct: 72 -----DKVDQAQDGSVLIYSAHGVSKSIKQLAEL--RDLEVIDATCPLVNKVHKEVQLYD 124
Query: 142 KGDYTSIIHGKYSHEETVATA-SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
K Y I+ G H E T + IIV+N+ + + +
Sbjct: 125 KSGYQVILIGHKGHREVEGTVGQISTPVIIVQNLNDIDKI-------------------- 164
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ FDPD K+ QTT+ +T K++ + +KF N
Sbjct: 165 --------EIFDPD----KLAYVTQTTLSVDDT----KVIIDKLKKKFP----NIKGPDL 204
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV---------EIAEDRGIPS--YWIDSEKRIGP 309
IC ATQ RQ K + E VD++ ++ + E I + + IDS K I
Sbjct: 205 KDICYATQNRQTTT-KRLAELVDIVFILGSKNSSNSNRLKELAAIQTQAFLIDSYKEIDL 263
Query: 310 GNKIAYKLMHGELVEKENWLPKGQIT-IGITSGASTPDKAVEDVL 353
N L IT IGIT+GAS PD V+ V+
Sbjct: 264 -----------------NLL--NDITKIGITAGASAPDILVQQVI 289
>gi|379734361|ref|YP_005327866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Blastococcus
saxobsidens DD2]
gi|378782167|emb|CCG01827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Blastococcus
saxobsidens DD2]
Length = 323
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 145/341 (42%), Gaps = 78/341 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A E + +++ +I+HN V LE I VE
Sbjct: 7 RVLLADPRGYCAGVDRAV-VAVERTLEIHGAPVYVRKQIVHNKHVVATLERRGA--IFVE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G VVV A G + + ++ +D TCP V+KV ++ + D+
Sbjct: 64 E----TDEVPEGSVVVFSAHGVSPAVHQEATARQLRTIDATCPLVTKVHQEAKRFARDDF 119
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G+ +
Sbjct: 120 DILLIGHRGHEEVEGTAGEAPAHVQL-----------------VDGAQDVANVQVR---- 158
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
DP+ KV +QTT+ +E V++ R G+++ + IC
Sbjct: 159 ------DPE----KVVWLSQTTL---SVDETLATVDQLKNRFPGLQSPPS-----DDICY 200
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNK 312
ATQ RQ A+ +M E DL+LV VE+A + G SY +D I P
Sbjct: 201 ATQNRQQAVKQMAAE-CDLVLVVGSTNSSNSVRLVEVALEAGARASYLVDYAAEIDPA-- 257
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL G T+G+TSGAS P+ V +VL
Sbjct: 258 ---------------WL-DGVSTVGVTSGASVPEILVSEVL 282
>gi|302542810|ref|ZP_07295152.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
hygroscopicus ATCC 53653]
gi|302460428|gb|EFL23521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
himastatinicus ATCC 53653]
Length = 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 149/331 (45%), Gaps = 56/331 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ EI+HN V + LE+ I V+
Sbjct: 11 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRKEIVHNKYVVQTLEKKGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G +V+ A G A + + +D TCP V+KV + K DY
Sbjct: 68 ETEE----VPEGSIVIFSAHGVAPVVHEEAAQRQLATIDATCPLVTKVHKEAVRFAKEDY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE + T+ A ++ + ++G K +
Sbjct: 124 DILLIGHEGHEEVIGTSGEAPDHVTL-----------------VDGPGDVKNVEVR---- 162
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS--FNTI 263
D KV +QTT+ V++TM +++ IS + I
Sbjct: 163 ----------DESKVVWLSQTTL----------SVDETMETVDALQDRFPQLISPPSDDI 202
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ K V + DL++VV S + E IG G K + + + +
Sbjct: 203 CYATQNRQIAI-KQVAAESDLVIVV--GSKNSSNSVRL-VEVAIGAGAKDGHLVDYASEI 258
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ E WL +G T+G+TSGAS PD VE VL+
Sbjct: 259 D-EAWL-EGVTTVGVTSGASVPDVLVEGVLE 287
>gi|424924981|ref|ZP_18348342.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas fluorescens R124]
gi|404306141|gb|EJZ60103.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas fluorescens R124]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 147/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T S G +V++ K+ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDGSNGGAIYLVEDEKDV---------AELQVRNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W +G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QKSWF-EGVERIGITAGASAPEVLVRGVIQQL 283
>gi|407773094|ref|ZP_11120395.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thalassospira
profundimaris WP0211]
gi|407283558|gb|EKF09086.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thalassospira
profundimaris WP0211]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 63/342 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
++++ LA GFC GV+RA++I +A +++ +++ +EI+HN V RL +M +
Sbjct: 5 ASLRIVLANPRGFCAGVDRAIEIVEKALEKY-GAPVYVRHEIVHNKFVVNRLRDMGAVFV 63
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D V G V+ A G + ++ +D TCP VSKV E+H
Sbjct: 64 ------DELDAVPDGVPVIFSAHGVPKSVPEAAETRKLEYLDATCPLVSKVHRGAERHHA 117
Query: 143 GDYTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
++ G H E + T G +V+ ++AE + E++
Sbjct: 118 DGKHILLIGHAGHPEVIGTMGQLPPGSMTLVETEEDAETI-------EIS---------- 160
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
DP+ + QTT+ ++ K++E + R+F V +
Sbjct: 161 -----------DPE----NLAFVTQTTL---SLDDTAKIIE-ILQRRFPSIAVPKK---- 197
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
IC AT RQ A+ K++ EK D ILV+ A + + ++ KR G +
Sbjct: 198 EDICYATTNRQHAV-KLIAEKADAILVLG-APNSSNSNRLVEVAKREGCTRSV------- 248
Query: 321 ELVEKE---NWLP-KGQITIGITSGASTPDKAVEDVLKKVFE 358
LVE+ +W G ++GIT+GAS P+ VE+V+ E
Sbjct: 249 -LVERAKDIDWSKLDGISSLGITAGASAPEILVEEVIDACRE 289
>gi|320103812|ref|YP_004179403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isosphaera
pallida ATCC 43644]
gi|319751094|gb|ADV62854.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isosphaera
pallida ATCC 43644]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 83/347 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA GFC GV A++ A + F +++ +EI+HN V +R + V I V
Sbjct: 1 MKVILANPRGFCAGVNMAIESLDRALEIF-GAPLYVYHEIVHNKWVVERFQRRGV--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFG--AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
E+ + V +G ++ A G A+ E+ + +Q++D TCP V+KV K+ K
Sbjct: 58 ED----LNDVPEGSPLLFSAHGVSPAIRELS--RQRRLQVIDATCPLVTKVHLEAVKYAK 111
Query: 143 GDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
YT I+ G H+E V T A + ++V+++++ E L K A+L
Sbjct: 112 LGYTIILIGHEGHDEVVGTMGEAPDRMVLVESVEDVE---------RLEVPDPNKLAYL- 161
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ + + +V + RKF H +
Sbjct: 162 ----------------------TQTTL----SVDDANIVIAALKRKFPA----IHHPPKD 191
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ+A+ ++ + DL+LV+ EIA G P++ ID + P
Sbjct: 192 DICYATQNRQEAIRELAPQA-DLVLVIGSQNSSNSLRLAEIANLLGTPAHLIDGVGELQP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G T+ +++GAS P+ V+D++K +
Sbjct: 251 -----------------EWF-EGVQTVLVSAGASAPEDVVQDLVKHL 279
>gi|407275856|ref|ZP_11104326.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus sp.
P14]
Length = 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ +A ++ I++ EI+HN V + L E V + VE
Sbjct: 23 RVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRHVVETLAERGV--VFVE 79
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G V+V A G + + ++++ +D TCP V+KV ++ + DY
Sbjct: 80 E----TDEVPEGAVLVFSAHGVSPAVHASAAERSLRTIDATCPLVTKVHQEAKRFARDDY 135
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++ + ++G + + +
Sbjct: 136 DILLIGHEGHEEVEGTAGEAPDHVQL-----------------VDGPDAVDQVTVR---- 174
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
D KV +QTT+ ET E + +L K + + + IC
Sbjct: 175 ----------DEAKVIWLSQTTLSVDETMETVQRLRAKFPLLQDP---------PSDDIC 215
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E DL++VV R + E +G G + A+ + + V+
Sbjct: 216 YATQNRQVAVKAMAPE-CDLVIVV---GSRNSSNSVRLVEVALGAGARAAHLVDYAREVD 271
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL G T+GITSGAS P+ V V+ + E
Sbjct: 272 P-AWL-DGVRTVGITSGASVPEVLVRGVIDLLAE 303
>gi|398944110|ref|ZP_10671077.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM41(2012)]
gi|398158519|gb|EJM46863.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM41(2012)]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 148/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T S G +V++ K+ EL ++ K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDGSNGGAIYLVEDEKDV---------AELQVNNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|291522293|emb|CBK80586.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Coprococcus catus GD/7]
Length = 637
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 83/354 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVE 85
V LA++ GFC+GV RAV +AY + +K++ IIHN TV + LE V+ + +E
Sbjct: 4 VILAKTAGFCFGVRRAVDMAYGITGR---DKVYTYGPIIHNETVVEDLEAKGVKVVHSIE 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E G +++ + G + EE+ L IVD TCP+V K+ VEK+ + Y
Sbjct: 61 EAAAL-----AGGTMIIRSHGVSKEEIDLLKQMGFDIVDATCPFVKKIHHIVEKYSEQGY 115
Query: 146 TSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
II G H E A + + + +I+++ +EA FK
Sbjct: 116 GIIIIGSADHPEVQAISGWCKEPPVIIESEEEAR-----------------------NFK 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DPD K+ + +QTT + LVE + + + NTIC
Sbjct: 153 T------DPDK---KLCLVSQTTF---NYNKFQLLVEIISKKGYDIR-------CLNTIC 193
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+AT+ERQ + + + +VD ++V+ +I ++ +Y+I +
Sbjct: 194 NATEERQ-SEAREIAGRVDAMIVIGGRQSSNTQKLYDICKNECKNTYYIQT--------- 243
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
LV+ + + +GIT+GASTP+ +E+V + E+ E++ +
Sbjct: 244 ---------LVDLDLKTFESIGNVGITAGASTPNNIIEEVHTNMSEMGNEQSFE 288
>gi|325272202|ref|ZP_08138625.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
TJI-51]
gi|324102668|gb|EGC00092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
TJI-51]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 146/346 (42%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHEGHPEVEGT---MGQY-------------DPSNGGAI---------YLVEDE 148
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V+K DPD + QTT+ +T + + G +
Sbjct: 149 EDVAKLQVRDPD----HLAFVTQTTLSMDDTSRVIDALRARFPNIGGPRK--------DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ +E D++LVV E+AE G P+Y ID
Sbjct: 197 ICYATQNRQDAVKQLADES-DVVLVVGSPNSSNSNRLRELAERMGTPAYLIDG------- 248
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
A L G W + IGIT+GAS P+ V V++++
Sbjct: 249 ---AEDLQRG-------WFDQAA-RIGITAGASAPEVLVRGVIEQL 283
>gi|440731883|ref|ZP_20911859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens DAR61454]
gi|440370499|gb|ELQ07397.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens DAR61454]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 148/362 (40%), Gaps = 84/362 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA GFC GV+RA++I A + I++ +E++HN V L++ I V
Sbjct: 1 MDVLLANPRGFCAGVDRAIEIVKRAIETL-GAPIYVRHEVVHNRFVVDDLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V G+ V+ A G + + +++ D TCP V+KV V +H +
Sbjct: 58 EE----LDEVPDGNTVIFSAHGVSQAVRQEAERRGLKVFDATCPLVTKVHFEVARHCRAG 113
Query: 145 YTSIIHGKYSHEETVATAS------FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
++ G H E T AG+ +V+++++ A
Sbjct: 114 RDVVLIGHAGHPEVEGTMGQWNRERGAGRIYLVEDIEQV--------------------A 153
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
L+ + PD + QTT+ +T I + G +N
Sbjct: 154 TLDIQQ--------PD----NLAYTTQTTLSVDDTRGIIDALRARYPALQGPKN------ 195
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ + + DL+LVV E+A G+ SY ID
Sbjct: 196 --DDICYATQNRQDAVRDLARQ-CDLVLVVGSPNSSNSNRLSELARRDGVESYLIDGADE 252
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
I P W+ G+ IG+T+GAS P V+ V+ ++ E+ + +
Sbjct: 253 IDPA-----------------WI-AGKRRIGLTAGASAPQVLVDGVIARLRELGADGVGE 294
Query: 367 LA 368
LA
Sbjct: 295 LA 296
>gi|70732623|ref|YP_262386.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
protegens Pf-5]
gi|123652817|sp|Q4K5U7.1|ISPH_PSEF5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|68346922|gb|AAY94528.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
protegens Pf-5]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 146/349 (41%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ EL + + AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AELQVRNPERLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|312115721|ref|YP_004013317.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodomicrobium
vannielii ATCC 17100]
gi|311220850|gb|ADP72218.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodomicrobium
vannielii ATCC 17100]
Length = 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 144/347 (41%), Gaps = 79/347 (22%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+++V L + GFC GV RA+ I A +++ + +++ +EI+HN V L+ + +
Sbjct: 9 GSIQVVLVQPRGFCAGVVRAISIVERALEKY-DAPVFVRHEIVHNKHVVDDLKAKGARFV 67
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ D + +G V + A G A + ++ + + ++D TCP V+KV +++
Sbjct: 68 ------DEIDEIPEGAVTIFSAHGVAKDVEISAEERGLPVIDATCPLVTKVHLQGKRYLG 121
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T I+ G H E T G +V+ + L S T A++
Sbjct: 122 QGRTLILVGHAGHPEVEGTMGQIPGTVYLVQTEDDV---------AALPVSRDTPVAYI- 171
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ +T I ++ G N
Sbjct: 172 ----------------------TQTTLSIDDTRGIILAIKDRFKDVIGP--------GTN 201
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ ++ + D+ILVV EI E+ G+PSY + + P
Sbjct: 202 DICYATQNRQMAVREL-SKIADVILVVGAKNSSNSNRLREIGEEAGVPSYLLADGSELKP 260
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+W+ QI +G+T+GAS P+ V+DV++ +
Sbjct: 261 -----------------DWVRGAQI-VGLTAGASAPEGMVQDVIEAL 289
>gi|398865223|ref|ZP_10620745.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM78]
gi|398243747|gb|EJN29326.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM78]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 146/349 (41%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASSGGAIYLVEDEKDV---------AELQVRNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------DKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|237801853|ref|ZP_04590314.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|237805331|ref|ZP_04592035.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331024711|gb|EGI04767.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331026438|gb|EGI06493.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 146/349 (41%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEASGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + + + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAANGGAIYLVEDEADVASLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
S F QTT+ +T + ++ + + F +
Sbjct: 158 NPESLAF-----------VTQTTLSMDDTSRV-------------IDALRQRFPAIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W +G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QQSWF-EGVERIGITAGASAPEVLVRGVIQQL 283
>gi|422296817|ref|ZP_16384477.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas avellanae
BPIC 631]
gi|407991931|gb|EKG33661.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas avellanae
BPIC 631]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 141/344 (40%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D + GG + + + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAVNGGAIYLVEDEADVASLEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
S F QTT+ +T + + K G + IC
Sbjct: 158 NPESLAF-----------VTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ W G IGIT+GAS P+ V V++++
Sbjct: 253 ------------QQGWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|422591464|ref|ZP_16666107.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422653327|ref|ZP_16716095.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330878967|gb|EGH13116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330966378|gb|EGH66638.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 141/344 (40%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D + GG + + + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAVNGGAIYLVEDEADVASLEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
S F QTT+ +T + + K G + IC
Sbjct: 158 NPESLAF-----------VTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ W G IGIT+GAS P+ V V++++
Sbjct: 253 ------------QQGWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|404258050|ref|ZP_10961373.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
namibiensis NBRC 108229]
gi|403403657|dbj|GAB99782.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
namibiensis NBRC 108229]
Length = 317
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 52/333 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A + +++ EI+HN V + L + +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNRHVVETLADRGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + + + +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGAIVVFSAHGVSPQVHASAAERNLRTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + ++G S + K
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPRHIQL-----------------VDGPDSVDSVTVRDESK 161
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
V +QTT+ ET E + + KF + N + IC
Sbjct: 162 LV--------------WLSQTTLSVDETME----TVRRLREKFPLLN----DPPSDDICY 199
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ M E DL++VV S + E + G K + + + ++
Sbjct: 200 ATQNRQVAVKAMAPE-CDLVIVV--GSQNSSNSVRL-VEVALQAGAKAGHLVDYAREID- 254
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL +G T+G+TSGAS P+ V VL + E
Sbjct: 255 ETWL-EGVNTVGVTSGASVPEVLVRGVLDYLAE 286
>gi|217077883|ref|YP_002335601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Thermosipho africanus TCF52B]
gi|217037738|gb|ACJ76260.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermosipho
africanus TCF52B]
Length = 811
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 73/329 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++K+A+ GFC+GVE+AV + E K + ++ ++I+HN V + LE + +
Sbjct: 1 MQIKIAKGIGFCFGVEKAVNVTKELLKS--GKNVFTDDDIVHNKQVMEELERLGLS---- 54
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ GD+ ++ A G E++ + ++ ++VD TC V ++ +VE ++
Sbjct: 55 ---------YDNGDIYLIRAHGLPKEKIEKIKKEH-RVVDLTCNIVYNLFKTVEVYENKG 104
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +++GK +H E +A S++ II T E + K
Sbjct: 105 YQVVVYGKITHPEMIALKSYSKNAII------------------------TMEPLVIKSD 140
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTI 263
K+ +A+QTTM + E KL + ++ +F V FN+I
Sbjct: 141 --------------KIFVASQTTMSYKDFENFYNKLKDISIYNEFKV---------FNSI 177
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C+ T R+ + K+ +E VDL++VV + ++ K ++ K +H E +
Sbjct: 178 CNITHNREIEVEKLSKE-VDLMIVVG-------GKHSSNTRKLFNIASQ-HTKAIHIETI 228
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDV 352
++ +PKG ++GI SG STP + VE++
Sbjct: 229 DEIKEIPKGVDSVGIISGTSTPKEIVEEI 257
>gi|397736242|ref|ZP_10502926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus sp.
JVH1]
gi|396928085|gb|EJI95310.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus sp.
JVH1]
Length = 336
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 149/358 (41%), Gaps = 80/358 (22%)
Query: 10 IKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPT 69
I + ++G G +V LAE G+C GV+RAV+ +A ++ I++ EI+HN
Sbjct: 11 ITRSADSGASRADGEKRVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRH 69
Query: 70 VNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPW 129
V L + V + + D V +G ++V A G + + +N++ +D TCP
Sbjct: 70 VVDTLTDQGVVFV------DETDEVPEGALLVFSAHGVSPAVHESAAARNLRTIDATCPL 123
Query: 130 VSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGEL 189
V+KV ++ + D+ ++ G HEE TA A ++ + +
Sbjct: 124 VTKVHQEAKRFARDDFDILLIGHEGHEEVEGTAGEAPDHVQL-----------------V 166
Query: 190 NGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKF 248
+G S + D KV +QTT+ ET + + +L E+
Sbjct: 167 DGPDSVDAVTVR--------------DESKVIWLSQTTLSVDETMQTVARLRERFP---- 208
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI 296
N + IC ATQ RQ A+ M E DL++V VE+A + G
Sbjct: 209 -----NLQDPPSDDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSVRLVEVALNAGA 262
Query: 297 -PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
SY +D + + P WL G T+GITSGAS P+ V V+
Sbjct: 263 KASYLVDYAREVDPA-----------------WL-DGVRTVGITSGASVPEILVRGVI 302
>gi|429334376|ref|ZP_19215042.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida CSV86]
gi|428760953|gb|EKX83201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida CSV86]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 151/353 (42%), Gaps = 87/353 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y + NG S +L + +
Sbjct: 114 KECILIGHAGHPEVEGT---MGQY------------------DDSNGGS----IYLVEDE 148
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
V++ +PD ++ QTT+ +T + ++ + F S
Sbjct: 149 DDVARLEVRNPD----RLAFVTQTTLSMDDTSRV-------------IDALRTRFPSIGG 191
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 192 PRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLIDGAE 250
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ + NW G +GIT+GAS P+ V V++++ E
Sbjct: 251 DL-----------------QRNWF-DGVERVGITAGASAPEVLVRGVIQQLRE 285
>gi|262172238|ref|ZP_06039916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
MB-451]
gi|261893314|gb|EEY39300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
MB-451]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + + +
Sbjct: 58 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EKF 203
++ G H E T G+Y +S T +L EK
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 147
Query: 204 KKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ VS K DP + +QTT+ ET ++ + + + G
Sbjct: 148 EDVVSLQAKVKDPS----HLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 196 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIY 254
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W + +G+T+GAS P++ V +L ++ E+
Sbjct: 255 P-----------------EWFENASL-VGVTAGASAPEELVNQILDRIKEL 287
>gi|452958573|gb|EME63926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
decaplanina DSM 44594]
Length = 337
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 147/336 (43%), Gaps = 62/336 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G +V LA+ G+C GV+RAV IA E + +++ EI+HN V + L E V I
Sbjct: 24 GGKRVLLAKPRGYCAGVDRAV-IAVEKALELYGAPVYVRKEIVHNRHVVETLRERGV--I 80
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E + V +G++VV A G + +N++ +D TCP V+KV V + K
Sbjct: 81 FVDETSE----VPEGELVVFSAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFAK 136
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A + + + E
Sbjct: 137 DDYDILLIGHEGHEEVEGTAGEAPDKVQLVDTAE-------------------------- 170
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DVD V++ ++ L T V++TM R V+ + + F
Sbjct: 171 -----------DVDKVEIRDPSKVIWLSQTTLS----VDETMER---VDQLRDKFPGLAD 212
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ M E DL+LVV R + E + G + ++ +
Sbjct: 213 PPSDDICYATTNRQVAVKAMAAE-CDLVLVV---GSRNSSNSKRLVEVALKAGARASHLI 268
Query: 318 MHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
V+ E WL +G T+G+TSGAS P+ V D+L
Sbjct: 269 DFAHEVD-EAWL-EGVETVGVTSGASVPEVLVMDLL 302
>gi|284989586|ref|YP_003408140.1| hydroxymethylbutenyl pyrophosphate reductase [Geodermatophilus
obscurus DSM 43160]
gi|284062831|gb|ADB73769.1| hydroxymethylbutenyl pyrophosphate reductase [Geodermatophilus
obscurus DSM 43160]
Length = 324
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 145/341 (42%), Gaps = 78/341 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A E + +++ +I+HN V LE +
Sbjct: 7 RVLLADPRGYCAGVDRAV-VAVERALEIHGAPVYVRKQIVHNKHVVATLERRGAVFV--- 62
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VVV A G + + ++ +D TCP V+KV ++ + DY
Sbjct: 63 ---DETDEVPEGSVVVFSAHGVSPTVHAEAAARQLRTIDATCPLVTKVHQEAKRFARDDY 119
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ A +I + + AE V D
Sbjct: 120 DILLIGHRGHEEVEGTSGEAPDHI--QLVDGAEDVADV---------------------- 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
+ DP+ KV +QTT+ +E V++ R G+++ + IC
Sbjct: 156 ---QVRDPE----KVVWLSQTTL---SVDETLATVDQLKTRFPGLQSPPS-----DDICY 200
Query: 266 ATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGNK 312
ATQ RQ A+ +M E DL++V VE+A + G SY +D I P
Sbjct: 201 ATQNRQQAVKQMAAE-CDLVIVVGSTNSSNSVRLVEVALEAGARASYLVDFASEIDPA-- 257
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL +G T+G+TSGAS P+ V +VL
Sbjct: 258 ---------------WL-EGVGTVGVTSGASVPEVLVGEVL 282
>gi|388546371|ref|ZP_10149647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M47T1]
gi|388275608|gb|EIK95194.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M47T1]
Length = 314
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 143/350 (40%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGSIYLVEDEK 149
Query: 205 KAVS-KGFDPDVDLVKVGIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENVNEHFI 258
S + +PD + QTT+ +T + G+ RK
Sbjct: 150 DVASLQVRNPD----NLAFVTQTTLSMDDTSRVIDALRGRFPNIGGPRK----------- 194
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 195 --DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ ++ W G IGIT+GAS P+ V V+ ++
Sbjct: 252 M-----------------QQAWF-DGVQRIGITAGASAPEVLVRGVINQL 283
>gi|339319652|ref|YP_004679347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Midichloria mitochondrii IricVA]
gi|338225777|gb|AEI88661.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Midichloria mitochondrii IricVA]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 155/362 (42%), Gaps = 95/362 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMA------ 78
+KV LA GFC GVERA++I A K++ ++I +EI+HN V L++
Sbjct: 8 IKVVLANPRGFCAGVERAIEIVERALKKYGA-PVYIKHEIVHNRYVVNSLKDKGAIFTDD 66
Query: 79 VQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+++IP G VV+ A G + + K + I+D TCP V KV +
Sbjct: 67 IESIP------------NGAVVIFSAHGVSKKVEDDAKYKELYILDATCPLVKKVHREAQ 114
Query: 139 KHKKGDYTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTK 196
K+ ++ G +H E T+ A + ++V+++++ E L S K
Sbjct: 115 KYVASGRKLVLIGHKNHPEIEGTSGRVAADQVVLVEDLEQIE---------NLPFKSDEK 165
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
A++ QTT+ +T+ LV R ++
Sbjct: 166 LAYV-----------------------TQTTLSIDDTK---NLVNTLYERYTDIDGP--- 196
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
+ IC ATQ RQDA+ +M + +D++LV+ ++ E +G+ SY I E
Sbjct: 197 --ALKDICYATQNRQDAIKEMAK-YIDVLLVIGATNSSNSSRLRDLGESQGVASYLIADE 253
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD---KAVEDVLKKVFEIKR 361
+I +W +G+ +GIT+GAS P+ K V D+L K +I
Sbjct: 254 TQINL-----------------DWF-EGKQAVGITAGASAPEVLLKQVLDLLSKYHQIVL 295
Query: 362 EE 363
EE
Sbjct: 296 EE 297
>gi|295091662|emb|CBK77769.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Clostridium cf. saccharolyticum K10]
Length = 351
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 77/340 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V++A++ GFC+GV+RAV+ YE K+ I+ IIHN V + LEE V+ I
Sbjct: 69 IEVRVAKTAGFCFGVKRAVEQVYEQIKK-GNGPIYTYGPIIHNEEVVRDLEEKGVRVI-- 125
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ K++ ++KG VV++ + G E L + + +VD TCP+V K+ V++ +
Sbjct: 126 -DTKEELSALSKG-VVIIRSHGVGREIYEILEHNGITVVDATCPFVKKIHRIVKEQGEEG 183
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
II G SH E + +V +K AE LE+
Sbjct: 184 RRVIIVGDESHPEVQGIKGWGNDDTLV--IKTAEE--------------------LERL- 220
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P D ++ + QTT + ++I VEK ++ + + NTIC
Sbjct: 221 --------PLRDGERLCVVAQTTFNYNKFKDI---VEKISKTRYDI-------LVLNTIC 262
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
+ATQERQ K + +VD ++V+ EI +Y+I + + P
Sbjct: 263 NATQERQ-VEAKQIASEVDAMIVIGGKNSSNTQKLFEICRRECKNTYYIQTLSDLKP--- 318
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDV 352
EK + ++GIT+GASTP+ +E+V
Sbjct: 319 -----------EKAGSVR----SVGITAGASTPNNIIEEV 343
>gi|254819702|ref|ZP_05224703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|379745855|ref|YP_005336676.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|379753150|ref|YP_005341822.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-02]
gi|379760575|ref|YP_005346972.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-64]
gi|387874519|ref|YP_006304823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MOTT36Y]
gi|406029455|ref|YP_006728346.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
indicus pranii MTCC 9506]
gi|443304452|ref|ZP_21034240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. H4Y]
gi|378798219|gb|AFC42355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|378803366|gb|AFC47501.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-02]
gi|378808517|gb|AFC52651.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-64]
gi|386787977|gb|AFJ34096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MOTT36Y]
gi|405128002|gb|AFS13257.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
indicus pranii MTCC 9506]
gi|442766016|gb|ELR84010.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. H4Y]
Length = 332
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 146/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEA-RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+V LAE G+C GV+RAV+ A K P +++ +EI+HN V LE+ +
Sbjct: 24 RVLLAEPRGYCAGVDRAVETVERALEKHGP--PVYVRHEIVHNRHVVSTLEKAGAVFV-- 79
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G +VV A G A +N+ +D TCP V+KV + + D
Sbjct: 80 ----EETDEVPEGAIVVFSAHGVAPSVHSAAAERNLHTIDATCPLVTKVHNEARRFARND 135
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y ++ G HEE V TA A ++ + ++G ++ +
Sbjct: 136 YDILLIGHEGHEEVVGTAGEAPDHVQL-----------------VDGVAAVDNVTVRDED 178
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K V +QTT+ ET EI VE+ R +++ + IC
Sbjct: 179 KVV--------------WLSQTTLSVDETMEI---VERLRQRFPKLQDPPS-----DDIC 216
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQ A+ M E +L++VV +S + + H LV+
Sbjct: 217 YATQNRQVAVKAMAPE-CELVIVVGSRNSS-------NSVRLVEVALGGGAAAAH--LVD 266
Query: 325 -----KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL +G T+G+TSGAS P+ V+ VL+++ E
Sbjct: 267 WADDIDPAWL-EGVTTVGVTSGASVPEVLVQGVLERLAE 304
>gi|395650257|ref|ZP_10438107.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 147/350 (42%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 KAVS-KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
+ + +P+ ++ QTT+ +T + ++ + F +
Sbjct: 150 DVANLQVHNPE----RLAFVTQTTLSMDDTSRV-------------IDALRNRFPAIGGP 192
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 193 RKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +W G IGIT+GAS P+ V V++++
Sbjct: 252 L-----------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|95929493|ref|ZP_01312236.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfuromonas
acetoxidans DSM 684]
gi|95134609|gb|EAT16265.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfuromonas
acetoxidans DSM 684]
Length = 279
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 62/339 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA+S GFC+GV+RAV +AY A + E I +IH+P + +RLE + I V
Sbjct: 1 MEIILAKSAGFCFGVKRAVNMAYRAAEN--SEHICSLGPLIHSPQLVQRLEG---KGIRV 55
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ +Q +V+ + V++ + G E L K + +VD TCP+V K K
Sbjct: 56 QNSVEQ--IVD--ETVIIRSHGITRNEEQALERKGLPVVDATCPFVKKAQQYAALLGKEG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y+ +I G+ H E + + Y+ G E + ++ +EA
Sbjct: 112 YSVVIVGEQEH-------------------PEVQGIISYVAGSETSVVANPEEARTVTPH 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K K+G+ QTT + ++V++ + EN E I FNTIC
Sbjct: 153 K-------------KLGLVAQTTQ---SFDNFSEIVQELL------ENSKELRI-FNTIC 189
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
DAT RQ+ + + +V L++V+ G S RI ++I + H E +
Sbjct: 190 DATAVRQEEA-RQIAGRVALMVVIG-----GHNSANTTRLARIC--SEIQPRTHHIETAD 241
Query: 325 K--ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
+ +WL G +G+T+GASTP+ + DV+ ++ + +
Sbjct: 242 EICADWL-DGVEAVGVTAGASTPEWIIRDVVDRLTAVAK 279
>gi|429212818|ref|ZP_19203983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M1]
gi|428157300|gb|EKX03848.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M1]
Length = 314
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 143/344 (41%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNKFVVENLRNRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + N+ +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDTIVIFSAHGVSQAVRKEAENRGLKVFDATCPLVTKVHMEVVRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y + GG++ ++ + +
Sbjct: 114 QECILIGHEGHPEVEGT---MGQY-------------NRDNGGDIYLVEDEEDVAALQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ F QTT+ +T ++ + G N IC
Sbjct: 158 NPEALHF-----------VTQTTLSMDDTSKVIDALRAKFPYIKGPRK--------NDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + ++ DL+LVV E+AE G P Y ID + +
Sbjct: 199 YATQNRQDAV-KDLADQCDLVLVVGSPNSSNSNRLRELAERMGTPGYLIDGAEDL----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K W +G+ IGIT+GAS P+ V V++++
Sbjct: 253 ------------KREWF-EGKRLIGITAGASAPEVLVRGVIEQL 283
>gi|269219216|ref|ZP_06163070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269211363|gb|EEZ77703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 148/339 (43%), Gaps = 62/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ +A G+C GV+RAV A E + +++ EI+HN V + L I V
Sbjct: 46 RILIATPRGYCAGVDRAVD-AVEKALELYGAPVYVRKEIVHNKYVVETLSRRGA--IFVS 102
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G VV A G + +++Q +D TCP V+KV + K DY
Sbjct: 103 ETEE----VPEGARVVFSAHGVSPAVHAEAAARSLQTIDATCPLVTKVHKQAVRFAKDDY 158
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T A ++I V N E E++G
Sbjct: 159 DILLIGHTGHEEVEGTQGEAPEHIQVVNGPE-----------EVDGIEVR---------- 197
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DPD KV +QTT+ ET KT+ R + E F +
Sbjct: 198 ------DPD----KVVWISQTTLSVDET-------LKTVRR------LRERFPNLVDPPS 234
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
+ IC ATQ RQ A+ M E D ++VV A ++ G G AY++
Sbjct: 235 DDICYATQNRQGAVKAMAPE-CDAVIVVGSANSSN-SVRLVEVALEAGAGK--AYRVDRA 290
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
E V E WL +G T+G+TSGAS P+ V DV++++ EI
Sbjct: 291 EEVRDE-WL-EGVQTVGLTSGASVPEILVRDVVERLAEI 327
>gi|153941510|ref|YP_001391062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum F str. Langeland]
gi|384462094|ref|YP_005674689.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum F str. 230613]
gi|152937406|gb|ABS42904.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum F str.
Langeland]
gi|295319111|gb|ADF99488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1-like protein [Clostridium botulinum F str.
230613]
Length = 638
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ + K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQSAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|399006631|ref|ZP_10709154.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM17]
gi|425901659|ref|ZP_18878250.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397893064|gb|EJL09540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398121947|gb|EJM11558.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM17]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 148/354 (41%), Gaps = 93/354 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ ++ EL + K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEQDV---------AELQVRNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + ++ + + F +
Sbjct: 165 V-----------------------TQTTLSMDDTSRV-------------IDALRQRFPA 188
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID
Sbjct: 189 IGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLID 247
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + + +W G IGIT+GAS P+ V V++++
Sbjct: 248 GAEDM-----------------QRSWF-DGVERIGITAGASAPEVLVRGVIEQL 283
>gi|398901526|ref|ZP_10650379.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM50]
gi|398179607|gb|EJM67211.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM50]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 148/345 (42%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A + +P+ ++ QTT+ +T + + +T G ++ I
Sbjct: 150 DVAALQVNNPE----RLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD-------I 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|310779521|ref|YP_003967854.1| hydroxymethylbutenyl pyrophosphate reductase [Ilyobacter polytropus
DSM 2926]
gi|309748844|gb|ADO83506.1| hydroxymethylbutenyl pyrophosphate reductase [Ilyobacter polytropus
DSM 2926]
Length = 289
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 57/324 (17%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK 89
AE GFC+GV AV+++ ++ ++I++ ++HN V + L ++ + E K
Sbjct: 6 AEKMGFCFGVREAVELSEALSRKEKNKRIFMLGMLVHNEHVIEDLRNKGIEILEEETLLK 65
Query: 90 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVW-TSVEKHKKGDYTSI 148
D + +GD+V++ A G E L K V++ D C +V+++ T VE KKG Y I
Sbjct: 66 NEDDLKEGDIVIIRAHGTIKEIYDRLEEKKVEVHDAACSFVTEIRNTLVEMEKKG-YDII 124
Query: 149 IHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVS 208
G +H E SF + I K++ E +
Sbjct: 125 FIGDKNHPEVKGIISFGERVYIFKDLNE-----------------------------LID 155
Query: 209 KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS---FNTICD 265
G D + K + QTT+ K E++ E +N +F + FN IC
Sbjct: 156 SGIDKN---GKYAVLTQTTLNKNNFEKVR-------------EYINNYFPNAEIFNKICG 199
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
AT RQ A K+ E VDL+LV+ + D K I N Y + + +
Sbjct: 200 ATFVRQKAAEKLAGE-VDLVLVIGGKRSSNTRKLY-DISKGI---NSNTYLIQEAKDI-C 253
Query: 326 ENWLPKGQITIGITSGASTPDKAV 349
+WL G IGIT+GASTP++ +
Sbjct: 254 TDWLV-GIEKIGITAGASTPEEII 276
>gi|350530289|ref|ZP_08909230.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
rotiferianus DAT722]
Length = 317
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 152/354 (42%), Gaps = 86/354 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 58 EE----LHEVPDDNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y SS T +L
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------SSETGGMYLVETP 147
Query: 201 ---EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 148 TDVEKLKAIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPEIQGPRK----- 195
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ + VD+++VV E+AE G P Y D +
Sbjct: 196 ---DDICYATQNRQDAVRELAND-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPE 251
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W +G+ +G+T+GAS P++ V +L ++ E+
Sbjct: 252 DIKP-----------------EWF-EGKGKVGVTAGASAPEELVNQILDRIKEL 287
>gi|111022833|ref|YP_705805.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
jostii RHA1]
gi|123339839|sp|Q0S489.1|ISPH_RHOSR RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110822363|gb|ABG97647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodococcus
jostii RHA1]
Length = 336
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 149/358 (41%), Gaps = 80/358 (22%)
Query: 10 IKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPT 69
I + ++G G +V LAE G+C GV+RAV+ +A ++ I++ EI+HN
Sbjct: 11 ITRSADSGASRADGEKRVLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRH 69
Query: 70 VNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPW 129
V L + V + + D V +G ++V A G + + +N++ +D TCP
Sbjct: 70 VVDTLTDQGVVFV------DETDEVPEGALLVFSAHGVSPAVHESAAARNLRTIDATCPL 123
Query: 130 VSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGEL 189
V+KV ++ + D+ ++ G HEE TA A ++ + +
Sbjct: 124 VTKVHQEAKRFARDDFDILLIGHEGHEEVEGTAGEAPDHVQL-----------------V 166
Query: 190 NGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET-EEIGKLVEKTMMRKF 248
+G S + D KV +QTT+ ET + + +L E+
Sbjct: 167 DGPDSVDAVTVR--------------DESKVIWLSQTTLSVDETMQTVARLRERFP---- 208
Query: 249 GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI 296
N + IC ATQ RQ A+ M E DL++V VE+A + G
Sbjct: 209 -----NLQDPPSDDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSVRLVEVALNAGA 262
Query: 297 -PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
SY +D + + P WL G T+GITSGAS P+ V V+
Sbjct: 263 KASYLVDYAREVDPA-----------------WL-DGVRTVGITSGASVPEILVRGVI 302
>gi|398876547|ref|ZP_10631702.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM67]
gi|398883928|ref|ZP_10638875.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM60]
gi|398195754|gb|EJM82783.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM60]
gi|398204313|gb|EJM91117.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM67]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
A + +P+ K+ QTT+ +T + + +T G ++ I
Sbjct: 150 DVAALQVNNPE----KLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD-------I 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K + ++ D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAV-KTLADECDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|85859633|ref|YP_461835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Syntrophus
aciditrophicus SB]
gi|85722724|gb|ABC77667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Syntrophus
aciditrophicus SB]
Length = 577
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 75/348 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA++ GFC GV+RAV + + EKI+ +IHNP + L E + IP+
Sbjct: 1 MSVFLAKTAGFCMGVKRAVDTVLDIARHKGSEKIYTYGPLIHNPQTVEFLRERGI--IPI 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ + ++ +V+ A G + E + NK ++I+D TCP V+ V + +H D
Sbjct: 59 KD-IEALSASDQNAAIVIRAHGISPSERKKIRNKGLRIIDATCPKVTHVQAIIRQHAAKD 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G H E V + ++G N +E+
Sbjct: 118 YNILIIGDGDHPE-------------VNGLLGHAGGHGRVIGSLQN---------VEEL- 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P ++ KV + QTT EE +V + + + + FNTIC
Sbjct: 155 --------PIME--KVCVVAQTTQ---NVEEYAAIVRR-------IRDRFPETVVFNTIC 194
Query: 265 DATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIPSYWIDSEKRIGPGNKI 313
D+T++RQ + ++ +++V ++ +G P++ I++ +
Sbjct: 195 DSTEQRQAEVRELAARMEAMVIVGGRNSANTRRLAALSSQQGTPTFHIETADELNDAKLA 254
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361
Y IG+++GASTP+ ++ V+ ++ E +R
Sbjct: 255 PYD------------------RIGLSAGASTPNWIIDRVVDRIAEQQR 284
>gi|167630001|ref|YP_001680500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Heliobacterium
modesticaldum Ice1]
gi|167592741|gb|ABZ84489.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Heliobacterium
modesticaldum Ice1]
Length = 665
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 150/354 (42%), Gaps = 87/354 (24%)
Query: 25 VKVKLAESYGFCWGVERAV-QIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
++V LA+ GFC+GV+RA+ Q+ E + ++ +IHNP V +RL V+ +
Sbjct: 1 MQVLLADHAGFCFGVQRALDQVEKEVGQG---NRVVTYGPLIHNPQVVERLARQGVEEV- 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
K + G +V+ + G E IVD TCP+V KV +
Sbjct: 57 -----KDLAGASSGKLVIR-SHGVGPEVYEQAKQCGFDIVDATCPFVHKVQKLAKDFTDQ 110
Query: 144 DYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y I+ G +H E ++ GK ++V + +EA+ + D L ++ KEA L
Sbjct: 111 GYQVIVAGDRNHPEVQGIVAWTGGKALVVADEQEAKAL-DLQGKAALIAQTTLKEATLRH 169
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ A+ GK +E + NT
Sbjct: 170 IESALR----------------------------GKPIELAVR---------------NT 186
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC AT +RQDA ++ E VD+++VV +I + +P+Y +++ + P
Sbjct: 187 ICAATSKRQDAARRLAAE-VDVMVVVGGRNSSNTAKLAQICQGAAVPTYHVETADELDP- 244
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
W +G+ G+T+GASTP +E+V++++ ++ +E+A
Sbjct: 245 ----------------EWF-QGKQKAGVTAGASTPRWIIEEVVQRMTDVNQEQA 281
>gi|429729423|ref|ZP_19264082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
durum F0235]
gi|429149447|gb|EKX92425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
durum F0235]
Length = 324
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 150/344 (43%), Gaps = 82/344 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV+ A +++ +++ EI+HN V L E I V+
Sbjct: 11 KVLLAAPRGYCAGVDRAVETVERALEKY-GAPVYVRKEIVHNRYVVDTLAERGA--IFVD 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +V A G + +++ +D TCP V+KV V++ + Y
Sbjct: 68 ETTE----VPEGSHLVFSAHGVSPAVHAEAKALSLETLDATCPLVTKVHNEVKRFARDGY 123
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A + + ++G++S
Sbjct: 124 QILLIGHEGHEEVEGTAGEAPDVVHL-----------------VDGAASVD--------- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI--SFNTI 263
S F P+ LV + +QTT+ ET EI +L++ KF H + I
Sbjct: 158 --SLDFGPEDKLVWL---SQTTLSVDETMEIVQLLKA----KF------PHITDPPSDDI 202
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGI-PSYWIDSEKRIGPG 310
C ATQ RQ A+ K + E+ DL++VV E+A G SY +D ++ P
Sbjct: 203 CYATQNRQVAV-KAIAERSDLVIVVGSQNSSNSKRLVEVALQGGADASYLVDYAHQVKP- 260
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL G T+G+TSGAS P+ V+DV+K
Sbjct: 261 ----------------EWL-DGVTTVGVTSGASVPEILVQDVIK 287
>gi|182436265|ref|YP_001823984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|238689020|sp|B1W2D7.1|ISPH_STRGG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|178464781|dbj|BAG19301.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 329
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 145/344 (42%), Gaps = 82/344 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE+
Sbjct: 11 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRHEIVHNKYVVQTLEK--------- 60
Query: 86 EGKKQFDV---VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+G DV V +G +V+ A G A + + +D TCP V+KV ++ K
Sbjct: 61 KGAIFVDVTAEVPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAK 120
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE + T+ A +I + + E + E+ S
Sbjct: 121 DDYDILLIGHEGHEEVIGTSGEAPDHIQLVDGPED------VANVEVRDES--------- 165
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
KV +QTT+ ET E + KF N +
Sbjct: 166 ----------------KVVWLSQTTLSVDETME----TVDALKSKFP----NLLSPPSDD 201
Query: 263 ICDATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIP-SYWIDSEKRIGPG 310
IC ATQ RQ A+ K+ E+ +I+V VE+A D G P ++ +D I
Sbjct: 202 ICYATQNRQIAVKKLAEDAELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEI--- 258
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL +G T+G+TSGAS PD V+ VL+
Sbjct: 259 --------------DEAWL-EGVTTVGLTSGASVPDVLVDGVLE 287
>gi|374993841|ref|YP_004969340.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfosporosinus orientis DSM 765]
gi|357212207|gb|AET66825.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfosporosinus orientis DSM 765]
Length = 662
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 68/341 (19%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
VKLAE GFC+GV+RA+ +A R + + + +IHN V KRL +Q +
Sbjct: 3 VKLAEKAGFCFGVKRALDMAE--RTAETSQAVSL-GPLIHNQQVVKRLSGRGIQVV---- 55
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
+ + + +++ + G A +K +++VD TCP+V K K +
Sbjct: 56 --EDLEELTSQQALIIRSHGVAPNVYQGAEDKGIKVVDATCPFVQKAQRLAAKSAQMGQQ 113
Query: 147 SIIHGKYSHEETVATASFAGKYII-VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E +AG+ I ++ ++EA+ + Y+
Sbjct: 114 VIVMGDKLHPEVKGILGWAGEQAIPIQTVEEAKELSFYL--------------------- 152
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
+ + QTT L E ++VE+ ++N + I NTIC+
Sbjct: 153 -------------HLAVLAQTTQL---AENFARIVEE-------LKNHTDDLIVHNTICN 189
Query: 266 ATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
AT ERQ ++ VD+++VV + A R + S + K Y + E
Sbjct: 190 ATAERQKVARELA-GTVDVMVVVGGRDSANTRKLASICAEVTK--------TYLIETAEE 240
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+E E+W + G+T+GASTPD +E+V KK+ E+ +E
Sbjct: 241 LE-ESWFKDAK-NAGLTAGASTPDWIIEEVYKKMTEMNEQE 279
>gi|365825310|ref|ZP_09367268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
graevenitzii C83]
gi|365258685|gb|EHM88691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
graevenitzii C83]
Length = 342
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 144/339 (42%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA G+C GV+RAV +A + I++ EI+HN V + L +
Sbjct: 8 KLLLAAPRGYCAGVDRAVDAVEKALAHY-GAPIYVRKEIVHNKYVVEALSRRGAIFV--- 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G VV A G + +++ +D TCP V+KV + KGDY
Sbjct: 64 ---NETDEVPPGARVVFSAHGVSPAVHEQAAARHLATIDATCPLVTKVHKQAVRFAKGDY 120
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G HEE T A ++I V +NG + + +K
Sbjct: 121 DIILVGHSGHEEVEGTQGEAPEHIQV-----------------VNGPEEVDQVQVRNPEK 163
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V +QTT+ ET E V + E F +
Sbjct: 164 VV--------------WISQTTLSVDETMET-------------VRRLRERFPAMIDPPS 196
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMH 319
+ IC ATQ RQ A+ +M + D+++VV G S + E + G K AY++ +
Sbjct: 197 DDICYATQNRQAAVKQMA-PRADVVIVV----GSGNSSNSVRLKEVALEAGAKAAYRVDY 251
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
++ +WL + Q ++G+TSGAS P+ V +V++K+ E
Sbjct: 252 ASEIDP-SWLEQAQ-SVGLTSGASVPEILVREVVQKLAE 288
>gi|365175179|ref|ZP_09362616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synergistes sp.
3_1_syn1]
gi|363613518|gb|EHL65029.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synergistes sp.
3_1_syn1]
Length = 277
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 84/345 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE--MAVQNI 82
+++ A+ G C+GV+RA+ E K+ +++ IHNP RLE+ + V +
Sbjct: 1 MRIITADPTGLCFGVKRAITTLEEELKK--GRRVFALGSPIHNPQEIARLEKRGLVVVDS 58
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
P E V +G V + A G E L ++ ++VD TCP+V + +
Sbjct: 59 PEE--------VPEGAVSFVRAHGVTPEIFELLRERSAKMVDGTCPFVKTAQERAQTLSQ 110
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
Y II G SH E + + GE+ +S E E
Sbjct: 111 DGYIVIILGDASHPEVKGIMGY--------------------VSGEVRVLASAGEIPREL 150
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ + + GI +QTT E LV G +V+ +NT
Sbjct: 151 YGR-------------RCGILSQTTQ---RVETFAALVG-------GFASVSPEIKVYNT 187
Query: 263 ICDATQERQDAMYKMVEEKVDLIL-----------VVEIAEDRGIPSYWIDSEKRIGPGN 311
IC AT RQ ++ ++ EE +I+ + EIA G+P+ WI+
Sbjct: 188 ICRATLARQQSVCRLAEEADGIIVLGGRNSANTRKLAEIASGSGVPTLWIEHA------- 240
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
GEL + WL + + TIGI +G STPD ++++++K+
Sbjct: 241 --------GEL--EGGWL-ENKDTIGIAAGGSTPDWLIKELIQKL 274
>gi|339481687|ref|YP_004693473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
sp. Is79A3]
gi|338803832|gb|AEJ00074.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
sp. Is79A3]
Length = 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 86/357 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV L+ GFC GV+RA++I A I++ +E++HN V + LE+ +
Sbjct: 2 IKVLLSNPRGFCAGVDRAIEIVERALTMHGA-PIYVRHEVVHNRFVVENLEKKGAVFV-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D V + +++ A G + ++ +++ D TCP V+KV V K +K
Sbjct: 59 ----ENLDEVPQDSILIFSAHGVSHAVRREAADRKLKVFDATCPLVTKVHVEVAKMRKDG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+++G K +L + +
Sbjct: 115 KEIIMIGHQGHPEVEGTM------------------------GQIDGED--KGMYLVETE 148
Query: 205 KAVSKGFDPDVDLVKV------GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
DVD +KV QTT+ ++ ++V+ + R+F + +
Sbjct: 149 M--------DVDALKVRDEANLAYVTQTTL---SVDDAARIVD-ALRRRFPMITGPKK-- 194
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ KMV++ DL++VV E+A + + +Y +D ++
Sbjct: 195 --DDICYATQNRQDAVKKMVDQ-CDLVIVVGSPNSSNSNRLCEVARNANVEAYMVDRAEQ 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
+ +E+W G+ IGIT+GAS P+ V+ V+ ++ +I E+
Sbjct: 252 L-----------------QEDWF-LGKKIIGITAGASAPEILVQQVISRLKQIGAEQ 290
>gi|313202262|ref|YP_004040920.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus sp.
MP688]
gi|312441578|gb|ADQ85684.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus sp.
MP688]
Length = 308
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 153/353 (43%), Gaps = 81/353 (22%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GV+RA+ I +A ++F I++ +E++HN V L+ I
Sbjct: 5 LANPRGFCAGVDRAIIIVEQALEKF-GAPIYVRHEVVHNKFVVDELKRKGAVFI------ 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ + V G+ V+ A G + E + +++ D TCP V+KV V K ++ +
Sbjct: 58 EELEEVPPGNTVIFSAHGVSREVRTDAEARGLRVFDATCPLVTKVHNEVAKMRQDGKEIV 117
Query: 149 IHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+ G H E T S G Y++ K E S K
Sbjct: 118 MIGHKGHPEVEGTMGQSDGGMYLVEKP--------------EDVDSLQVK---------- 153
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
D K+ QTT+ ++ +V + KF + + + ++IC A
Sbjct: 154 ---------DPAKLAYVTQTTL---SIDDAASIV-TALKDKFPLISAPKS----DSICYA 196
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
TQ RQDA+ M ++ DL++VV E+A+++GI SY +D+ +
Sbjct: 197 TQNRQDAVKAMAKD-CDLVIVVGSPNSSNSNRLREVAQNQGIESYMVDNASYL------- 248
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+WL G+ IG+++GAS P+ V++V++++ E+ E +L
Sbjct: 249 ----------NADWL-AGKKRIGVSAGASAPEILVKEVIQRLQEMGAAEVTEL 290
>gi|209966900|ref|YP_002299815.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodospirillum
centenum SW]
gi|209960366|gb|ACJ01003.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodospirillum
centenum SW]
Length = 322
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 61/334 (18%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + LA GFC GV+RA+QI A ++F +++ +EI+HN V + LE +
Sbjct: 13 LHILLAAPRGFCAGVDRAIQIVEVALQKF-GAPVYVRHEIVHNRFVVESLERKGAVFV-- 69
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K+ D V VV A G +N+ VD TCP VSKV E+H +
Sbjct: 70 ----KELDEVPDDRPVVFSAHGVPKAIPAEAQRRNMIYVDATCPLVSKVHREAERHHESG 125
Query: 145 YTSIIHGKYSHEETVATAS--FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G H E V T G ++V+ ++AE LN AF+
Sbjct: 126 LRIVLIGHAGHPEVVGTMGQLPPGSVVLVETAEDAE---------RLNPEDPHNLAFV-- 174
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
QTT+ +T I +++ + G +
Sbjct: 175 ---------------------TQTTLSVDDTAGIVEVLRRRFPDIAGPKK--------ED 205
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKI--AYKLMHG 320
IC AT RQ A+ K + + D ILVV G P+ + R+ K+ + M
Sbjct: 206 ICYATTNRQGAV-KAIAGRADAILVV------GAPNS--SNSVRLVEVAKVQGCTRAMLV 256
Query: 321 ELVEKENW-LPKGQITIGITSGASTPDKAVEDVL 353
+ E+ +W L +G T+GIT+GAS P+ VE+V+
Sbjct: 257 QRAEQIDWSLLEGVATLGITAGASAPEVLVEEVI 290
>gi|258624725|ref|ZP_05719659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM603]
gi|258583012|gb|EEW07827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM603]
Length = 320
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y +S T +L
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVEKP 151
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E + S+ DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVESLQSQVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 200 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 259 P-----------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 291
>gi|257461294|ref|ZP_05626391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
gracilis RM3268]
gi|257441322|gb|EEV16468.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Campylobacter
gracilis RM3268]
Length = 278
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 151/335 (45%), Gaps = 67/335 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+++A+SYGFC+GV+RA++IA A + E+IHN RL QN V
Sbjct: 1 MKIEMAKSYGFCFGVKRAIKIAESAGEA------ATIGELIHNSEEINRLR----QNFGV 50
Query: 85 E--EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ EG + K +++ G +++ L +N +++D TCP+V+K VEK
Sbjct: 51 KTLEGVSEIKDEQK---LIIRTHGIQKDDLQRLKAQNKELIDATCPFVTKPQQIVEKMSA 107
Query: 143 GDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
Y +I G +H E S+A + ++ + KE + D LG
Sbjct: 108 EGYDIVIFGDKNHPEVKGVKSYAKSRVFVIMDTKELQ---DVKLG--------------- 149
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
P V LV +QTT + E K+ + M R FN
Sbjct: 150 -----------PRVALV-----SQTT---KKIESFTKIADFLMQRA-------RELRIFN 183
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
TIC+AT E Q+A+ K + +K D++++V ++ S+ K +Y L+ E
Sbjct: 184 TICNATLENQEAV-KSLSQKADVMIIVGGKNSSNTKQLFLISQNFC----KDSY-LIENE 237
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W + GI++GASTPD ++ V+ ++
Sbjct: 238 SELERSWFENKSLC-GISAGASTPDWIIKKVVARI 271
>gi|168180380|ref|ZP_02615044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum NCTC 2916]
gi|226949048|ref|YP_002804139.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain-containing protein [Clostridium botulinum A2 str.
Kyoto]
gi|182668877|gb|EDT80855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum NCTC 2916]
gi|226843882|gb|ACO86548.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A2 str. Kyoto]
Length = 638
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ + K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQSAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|357052891|ref|ZP_09113995.1| hypothetical protein HMPREF9467_00967 [Clostridium clostridioforme
2_1_49FAA]
gi|355386316|gb|EHG33356.1| hypothetical protein HMPREF9467_00967 [Clostridium clostridioforme
2_1_49FAA]
Length = 663
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 148/362 (40%), Gaps = 88/362 (24%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEK----IWITNEIIHNPTVNKRLEEMAVQN 81
KV +A+S GFC+GVERAV YE + +K I+ IIHN V K L + V
Sbjct: 4 KVTVAKSAGFCFGVERAVDQVYEQIEALKSKKTSGPIYTYGPIIHNEEVVKDLSDKGVMV 63
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
+ E+ + N+G V++ + G + L +NV +VD TCP+V K+ V +H
Sbjct: 64 LETEDELRALPK-NQG-TVIIRSHGVSRHVYEILKERNVAVVDATCPFVKKIHRIVAEHS 121
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYIL--GGELNGSSSTK--- 196
+I G H E + ++ V +K+ E V +Y L G +L S T
Sbjct: 122 AAGEAVVIIGSPDHPEVEGIKGWGNEHTTV--IKDGEGVDNYRLPEGRKLCIVSQTTFNY 179
Query: 197 EAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEH 256
F E +K + KG+D V
Sbjct: 180 NKFKELVEKFLKKGYDSSV----------------------------------------- 198
Query: 257 FISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSE 304
NTIC+ATQERQ ++ + VD ++V+ EI +++I +
Sbjct: 199 ---LNTICNATQERQVEAARIASQ-VDAMIVIGGRHSSNTQKLYEICLKECKDTFYIQTL 254
Query: 305 KRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 364
+ P + + + ++GIT+GASTP K +E+V ++ E E
Sbjct: 255 GDLDPDSVSSVR------------------SVGITAGASTPRKIIEEVHTRMAEQSFAEL 296
Query: 365 LQ 366
L+
Sbjct: 297 LK 298
>gi|118594280|ref|ZP_01551627.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylophilales
bacterium HTCC2181]
gi|118440058|gb|EAV46685.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylophilales
bacterium HTCC2181]
Length = 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 156/359 (43%), Gaps = 80/359 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+ + LA GFC GVERA+ I +A K+F I++ +E++HN V L+ + V N
Sbjct: 6 INIALANPRGFCAGVERAIIIVEQALKKF-GAPIYVRHEVVHNRFVIDDLKSKGAIFVDN 64
Query: 82 IP-VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH 140
I + EG V+ A G + N+ + +D TCP V+KV V K
Sbjct: 65 IADIPEGSH----------VIFSAHGVSKVVKTDAKNRKLIAIDATCPLVTKVHREVNKM 114
Query: 141 KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
+Y I+ G H E T G++ +S L
Sbjct: 115 YGENYHIIMIGHTGHPEVEGTM------------------------GQIEKNSPDASIHL 150
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
+ K+ VS P + +V +QTT+ +T+EI + + K+ N+ S
Sbjct: 151 IENKEDVSNLTIPVNN--RVSYVSQTTLSVDDTQEIIEAL------KYKYPNIQGPKSS- 201
Query: 261 NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQD++ KM+ + D+ILV VEIA+ +GI ++ ID+
Sbjct: 202 -DICYATQNRQDSVKKMIAYQ-DIILVVGSANSSNSNRLVEIAKKQGIEAHLIDNPD--- 256
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
E ++ + KG+ IG+T+GAS P+ V+ V+ + + + E ++
Sbjct: 257 ---------------EFDSDILKGKNRIGLTAGASAPEAQVQLVINFISQFNKIELTEI 300
>gi|149928070|ref|ZP_01916318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Limnobacter sp.
MED105]
gi|149823258|gb|EDM82494.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Limnobacter sp.
MED105]
Length = 309
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA+ GFC GV+RA++I A +QF I++ +EI+HN TV + L I V
Sbjct: 1 MEISLAQPRGFCAGVDRAIEIVERALQQF-GSPIYVKHEIVHNKTVVEDLRGKGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+E + V G VV A G + + + +++ D TCP V+KV V K +
Sbjct: 58 DE----LEDVPTGSTVVFSAHGVSQDVRTQAESLGLKVFDATCPLVTKVHVEVSKMRAQG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T I + +E D +LN ++ T+ AF+
Sbjct: 114 CEIIMIGHEGHPEVEGTMGQVKDGIYLVETEE-----DV---AKLNIAAGTQLAFV---- 161
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
QTT+ ++ +++ + KF ++ E IC
Sbjct: 162 -------------------TQTTL---SVDDASRVI-AALKAKF--PDIREP--KKADIC 194
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + +VDL+LVV E+AE G+P+ I++ +
Sbjct: 195 YATQNRQDAV-KFMARQVDLVLVVGSPSSSNSNRLREVAEKLGVPAILIENADSL----- 248
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ W G IG+T+GAS P+ V+ V+K++ E
Sbjct: 249 ------------ERAWF-DGVKHIGLTAGASAPEHLVQGVVKRLKE 281
>gi|148379766|ref|YP_001254307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. ATCC 3502]
gi|153931983|ref|YP_001384064.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. ATCC 19397]
gi|148289250|emb|CAL83346.1| Composite protein include: 4-hydroxy-3-methylbut-2-enyl diphosphate
reductase (N-terminus) and an RNA-associated domain
(C-terminus) [Clostridium botulinum A str. ATCC 3502]
gi|152928027|gb|ABS33527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A str. ATCC
19397]
Length = 638
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ + K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQSAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|258620353|ref|ZP_05715391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM573]
gi|424809657|ref|ZP_18235034.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio mimicus SX-4]
gi|258587232|gb|EEW11943.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM573]
gi|342323145|gb|EGU18931.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio mimicus SX-4]
Length = 320
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 80/351 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ + +
Sbjct: 5 MKILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV-- 61
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ V ++V+ A G + +++ + D TCP V+KV V + +
Sbjct: 62 ----EELSEVPNDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH 117
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y +S T +L
Sbjct: 118 MEVVLIGHAGHPEVEGT---MGQY-----------------------ASETGGMYLVEKP 151
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
E + S+ DP + +QTT+ ET ++ + + + G
Sbjct: 152 EDVESLQSQVKDPS----NLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK-------- 199
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
+ IC ATQ RQDA+ +++ ++VD+++VV E+AE G P Y D + I
Sbjct: 200 DDICYATQNRQDAV-RILAQQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPQDIH 258
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
P W ++ +G+T+GAS P++ V +L ++ E+
Sbjct: 259 P-----------------EWFENARL-VGVTAGASAPEELVNQILDRIKEL 291
>gi|71738057|ref|YP_273016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|257487499|ref|ZP_05641540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289625180|ref|ZP_06458134.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289651364|ref|ZP_06482707.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|416014064|ref|ZP_11561984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. B076]
gi|416024284|ref|ZP_11568416.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406197|ref|ZP_16483230.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422584359|ref|ZP_16659469.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422598513|ref|ZP_16672773.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422679406|ref|ZP_16737680.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|123638244|sp|Q48NK3.1|ISPH_PSE14 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|71558610|gb|AAZ37821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320326233|gb|EFW82287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320330657|gb|EFW86634.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330869176|gb|EGH03885.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330881358|gb|EGH15507.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330988790|gb|EGH86893.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331008754|gb|EGH88810.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ + S+ +E +
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDASNGGAIYLVEDEE 149
Query: 205 KAVS-KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
S + +PD + QTT+ +T + + K G + I
Sbjct: 150 DVASLQVRNPD----SLAFVTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ W +G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QQGWF-EGVERIGITAGASAPEVLVRGVIQQL 283
>gi|324997965|ref|ZP_08119077.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudonocardia
sp. P1]
Length = 320
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 152/335 (45%), Gaps = 56/335 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV+ +A Q+ +++ EI+HN V + L + I VE
Sbjct: 7 QVLLAKPRGYCAGVDRAVEAVEQALDQY-GAPVYVRKEIVHNKHVVETLRDRGA--IFVE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G VV A G + + ++ +D TCP V+KV ++ + DY
Sbjct: 64 EASE----VPEGAHVVFSAHGVSPAVRDEAKGRELRTIDATCPLVTKVHQEAKRFAREDY 119
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE T+ A ++I +V++ + + V
Sbjct: 120 DILLVGHAGHEEVEGTSGEAPEHIQLVESAADVDKVTVR--------------------- 158
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFG-VENVNEHFISFNTI 263
DPD KV +QTT+ ET E + + KF ++N + I
Sbjct: 159 -------DPD----KVVWLSQTTLSVDETME----TVRALREKFPKLQNPPS-----DDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ RQ A+ M + DL+LVV R + E +G G +Y + + + +
Sbjct: 199 CYATQNRQVAVKTMA-PRCDLVLVV---GSRNSSNSVRLVEVALGAGAGSSYLIDYAKEI 254
Query: 324 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ E WL +G TIG+TSGAS P+ V V+ + E
Sbjct: 255 D-ETWL-EGVQTIGVTSGASVPEVLVRGVVDHLAE 287
>gi|398840828|ref|ZP_10598059.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM102]
gi|398857356|ref|ZP_10613056.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM79]
gi|398109659|gb|EJL99579.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM102]
gi|398240947|gb|EJN26610.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM79]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T S G +V++ K+ EL ++ + AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDGSNGGAIYLVEDEKDV---------AELQVNNPERLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + + +T G ++
Sbjct: 165 V-----------------------TQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD---- 196
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ---ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|338730119|ref|YP_004659511.1| hydroxymethylbutenyl pyrophosphate reductase [Thermotoga thermarum
DSM 5069]
gi|335364470|gb|AEH50415.1| hydroxymethylbutenyl pyrophosphate reductase [Thermotoga thermarum
DSM 5069]
Length = 280
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 65/333 (19%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
+ +A++ GFC+GV+RA+ + + ++ +K+++ +++HN V L++ + I + +
Sbjct: 3 ILVAKNVGFCFGVKRALDLVLKLLEE--NKKVYLLGDLVHNNNVMNHLKQKGAETISLSD 60
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
K V+V+ A G E++ Q+VDTTCP V +++ +K + Y
Sbjct: 61 VPHD----AKDSVLVVRAHGVPPEDLQFAKMHFGQVVDTTCPIVQRLFQLAKKMSEEGYK 116
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+ GK H E +A + K+AF+E+
Sbjct: 117 ILTFGKKEHPEMIALKGY------------------------------VKDAFIEQNPIE 146
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
+S KV + +QTTM EE + K M + NVNE F FNTIC
Sbjct: 147 LSG---------KVCLLSQTTM---SIEEYKQFASKVM----EISNVNE-FRMFNTICRV 189
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK- 325
+ ER+ A + + ++ D+++VV + +++K + K A K++H E ++
Sbjct: 190 SAERE-AETRQIAQQSDVVIVVG-------GKHSSNTKKLVAIAEKYA-KVIHVEGADEV 240
Query: 326 -ENWLPKGQITIGITSGASTPDKAVEDVLKKVF 357
+N L + TIG+ SG STP + V+ +++K+
Sbjct: 241 DQNDLSNYK-TIGVVSGTSTPYEDVKKIIEKLL 272
>gi|311111870|ref|YP_003983092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
dentocariosa ATCC 17931]
gi|310943364|gb|ADP39658.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
dentocariosa ATCC 17931]
Length = 361
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 149/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV IA E + +++ +I+HN V + LE+ I V+
Sbjct: 34 KVLLATPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKQIVHNRHVVETLEQQGA--IFVD 90
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G V V A G + + ++ + +D TCP V+KV + K DY
Sbjct: 91 E----VDEVPEGSVTVFSAHGVSPAVVSAAGDRQLNTIDATCPLVNKVHREAVRFAKQDY 146
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE TA A ++I IV + E + V
Sbjct: 147 DILLIGHTGHEEVEGTAGEAPEHIQIVNSPDEVDSVTVR--------------------- 185
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DP+ KV +QTT+ ET E V + E F S
Sbjct: 186 -------DPE----KVVWISQTTLSVDETLET-------------VARLRERFPSLQDPP 221
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC AT RQ A+ K + + DL++VV A S + E + G K A ++
Sbjct: 222 SDDICYATSNRQGAI-KEIAPQSDLVIVVGSANSSN--SVRL-KEVALEYGAKRAERVDF 277
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 278 AHQVD-ESWF-EGVATVGLTSGASVPEVLVQEVLALLAE 314
>gi|326776894|ref|ZP_08236159.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus XylebKG-1]
gi|326657227|gb|EGE42073.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus XylebKG-1]
Length = 329
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV +A +Q+ I++ +EI+HN V + LE+
Sbjct: 11 RVLLAAPRGYCAGVDRAVIAVEKALEQY-GAPIYVRHEIVHNKYVVQTLEK--------- 60
Query: 86 EGKKQFDV---VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+G DV V +G +V+ A G A + + +D TCP V+KV ++ K
Sbjct: 61 KGAIFVDVTAEVPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAK 120
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE + T+ A +I + + E + E+ S
Sbjct: 121 DDYDILLIGHEGHEEVIGTSGEAPDHIQLVDGPED------VANVEVRDES--------- 165
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
KV +QTT+ ET E + KF N +
Sbjct: 166 ----------------KVVWLSQTTLSVDETME----TVDALKSKFP----NLLSPPSDD 201
Query: 263 ICDATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIP-SYWIDSEKRIGPG 310
IC ATQ RQ A+ K+ E+ +I+V VE+A D G P ++ +D I
Sbjct: 202 ICYATQNRQIAVKKLAEDAELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEI--- 258
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
E WL G T+G+TSGAS PD V+ VL+
Sbjct: 259 --------------DEAWL-DGVTTVGLTSGASVPDVLVDGVLE 287
>gi|440739039|ref|ZP_20918561.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BRIP34879]
gi|447915140|ref|YP_007395708.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
poae RE*1-1-14]
gi|440380411|gb|ELQ16978.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BRIP34879]
gi|445199003|gb|AGE24212.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
poae RE*1-1-14]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 151/346 (43%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DATNGGSI---------YLVEDE 148
Query: 205 KAVS--KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
K V+ + +P+ ++ QTT+ +T + + +T G ++
Sbjct: 149 KDVASLQVHNPE----RLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD------- 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 197 ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDL--- 252
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W G IGIT+GAS P+ V V++++
Sbjct: 253 --------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|117929065|ref|YP_873616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidothermus
cellulolyticus 11B]
gi|189045803|sp|A0LW20.1|ISPH_ACIC1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|117649528|gb|ABK53630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidothermus
cellulolyticus 11B]
Length = 340
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 143/342 (41%), Gaps = 80/342 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GVERAV +A + + +++ +I+HN V LE A I VE
Sbjct: 11 RVLLAQPRGYCAGVERAVDTVEKALELY-GPPVYVRKQIVHNKHVVAELE--AKGAIFVE 67
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G +VVL A G A + ++ +D TCP V+KV + +
Sbjct: 68 EA----DEVPEGSIVVLSAHGVAPSVYEQARQRRLKTIDATCPLVTKVHQEARRFAEQGL 123
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G +HEE V T A I +V +EAE+V
Sbjct: 124 EILLIGHANHEEVVGTTGEAPSSITLVDGPEEAEHV------------------------ 159
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ DP +V +QTT+ ET + +++ + + + + IC
Sbjct: 160 ----QVKDPS----RVAWLSQTTLSVDETLQTVEVLRRRFPQLIDPPS--------DDIC 203
Query: 265 DATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRIGPGN 311
ATQ RQ A+ K + DL++V VE+A D G SY +D I
Sbjct: 204 YATQNRQAAV-KRIAAIADLVIVVGSRNSSNSARLVEVALDSGAKASYLVDDASEI---- 258
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
E WL G T+G+TSGAS P+ V VL
Sbjct: 259 -------------DERWL-DGVWTVGVTSGASVPESLVTGVL 286
>gi|257057116|ref|YP_003134948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Saccharomonospora viridis DSM 43017]
gi|256586988|gb|ACU98121.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Saccharomonospora viridis DSM 43017]
Length = 327
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 152/338 (44%), Gaps = 62/338 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A +++ I++ EI+HN V L + V I V+
Sbjct: 12 RVLLAKPRGYCAGVDRAVVTVEKALEKY-GPPIYVRKEIVHNKYVVDTLRKRGV--IFVD 68
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E + V +G +VV A G + +N++ +D TCP V+KV V + + DY
Sbjct: 69 ETSE----VPEGSLVVFSAHGVSPAVHAEAAERNLRTIDATCPLVTKVHREVVRFARDDY 124
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A + + + E + K
Sbjct: 125 DILLIGHEGHEEVEGTAGEAPDRVQLVDTPE------------------------DVHKV 160
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V DP KV +QTT+ V++TM R V + E F
Sbjct: 161 TVR---DPS----KVVWVSQTTL----------SVDETMER---VNQLKERFPELADPPS 200
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
IC AT RQ A+ M E DL+LVV +++ + E + G + A+ + +
Sbjct: 201 EDICYATSNRQTAVKAMAPE-CDLVLVVG-SQNSSNSKRLV--EVALQAGARDAHLIDYA 256
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E WL +G TIG+TSGAS PD V ++L+K+ E
Sbjct: 257 HEVD-EKWL-EGVETIGVTSGASVPDVLVMELLEKLAE 292
>gi|160872865|ref|ZP_02062997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rickettsiella
grylli]
gi|159121664|gb|EDP47002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rickettsiella
grylli]
Length = 316
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 146/348 (41%), Gaps = 82/348 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA++I A F +++ +E++HN + L++ V +
Sbjct: 1 MKIVLANPRGFCAGVDRAIEIVKRALHLF-GRPLYVRHEVVHNRMIVAELQQKGVTFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + G + A G ++ +N++I D TCP V+KV V ++ +
Sbjct: 58 ----EHIQQIPMGATAIFSAHGVSLSVREAAKQRNLKIFDATCPLVTKVHMEVARYNRLG 113
Query: 145 YTSIIHGKYSHEETVATASF----AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
I+ G H E + G +V+N+ + LN + + +++
Sbjct: 114 QECILIGHADHPEVEGSLGHYDNPRGGIYLVENLDDI---------ASLNVKNPSLLSYV 164
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
QTT+ +T+ I K + K K +
Sbjct: 165 -----------------------TQTTLSLDDTQVIVKAL-KARFPKISTPKKED----- 195
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIG 308
IC ATQ RQ A+ K + ++ D++ V+ E+AE G P+Y IDS K I
Sbjct: 196 --ICYATQNRQQAV-KELTQQCDIVFVLGSVNSSNSNRLKELAERLGKPAYLIDSAKDI- 251
Query: 309 PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
L H W G+ +IGIT+GAS P+ V++V+K++
Sbjct: 252 --------LAH--------WF-IGKKSIGITAGASAPEFLVQEVVKQI 282
>gi|424032074|ref|ZP_17771495.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-01]
gi|424042590|ref|ZP_17780287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-02]
gi|408876486|gb|EKM15603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-01]
gi|408888963|gb|EKM27415.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-02]
Length = 317
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 155/360 (43%), Gaps = 86/360 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I V
Sbjct: 1 MKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE V ++V+ A G + ++++ + D TCP V+KV V + + +
Sbjct: 58 EE----LHEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---- 200
++ G H E T G+Y SS T +L
Sbjct: 114 MEVVLIGHAGHPEVEGT---MGQY-----------------------SSDTGGMYLVETP 147
Query: 201 ---EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHF 257
EK K V DP DL V +QTT+ ET ++ + + + G
Sbjct: 148 ADVEKLKAIVK---DPS-DLHYV---SQTTLSVDETADVIEELRRVFPDIQGPRK----- 195
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ + VD+++VV E+AE G P Y D +
Sbjct: 196 ---DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPE 251
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 365
I P W +G+ +G+T+GAS P++ V +L ++ E+ +A+
Sbjct: 252 DIKP-----------------EWF-EGKGKVGVTAGASAPEELVNQILDRIKELVGAQAV 293
>gi|260220447|emb|CBA27994.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 316
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 149/349 (42%), Gaps = 89/349 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE GFC GV+RA++I +A +F I++ +EI+HN V L+E I +E
Sbjct: 9 EILLAEPRGFCAGVDRAIEIVEKALAKF-GRPIYVRHEIVHNTYVVNDLKERGA--IFIE 65
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V G +V A G + + QI D TCP V+KV V K K Y
Sbjct: 66 E----LDDVPPGATLVFSAHGVSQAIQREAERRGFQIFDATCPLVTKVHVEVAKLHKEGY 121
Query: 146 TSIIHGKYSHEETVATASF--AGKYIIVKNMKEAEYVCDY--ILGGELNGSSSTKEAFLE 201
I+ G H E T +G +++ E V D I G+ +
Sbjct: 122 EFIMIGHKGHPEVEGTMGQLESGIHLV-------EDVADVARIQPGQTD----------- 163
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV--EKTMMRKFGVENVNEHFIS 259
K+ + QTT+ + +I V +++K +++
Sbjct: 164 -----------------KLAVVTQTTLSVDDAADITAAVVARFPLIKKPKMQD------- 199
Query: 260 FNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
IC ATQ RQDA+ K++ +VD+++VV E+A+ G SY +D+ +
Sbjct: 200 ---ICYATQNRQDAV-KVMSPQVDIVIVVGSPTSSNSNRLREVAKKLGTESYMVDNADEL 255
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
P W +G+ +G+T+GAS P+ V+ V+ ++
Sbjct: 256 KP-----------------EWF-EGRSRVGLTAGASAPEILVKAVIDRI 286
>gi|308178025|ref|YP_003917431.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
arilaitensis Re117]
gi|307745488|emb|CBT76460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
arilaitensis Re117]
Length = 361
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 54/334 (16%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV +A E + +++ +I+HN V LE I VE
Sbjct: 37 KVLLAAPRGYCAGVDRAV-VAVEKALEHYGPPVYVRKQIVHNLHVVSELESRGA--IFVE 93
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E ++ V +G +VV A G + + + ++N+Q +D TCP V+KV + K DY
Sbjct: 94 ENEE----VPEGALVVFSAHGVSPAVVQSAADRNLQTIDATCPLVTKVHREAVRFAKNDY 149
Query: 146 TSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE T A + IV N +EA+ V
Sbjct: 150 EILLIGHEGHEEVEGTYGEAPEVTTIVNNPEEADTV------------------------ 185
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ +PD K+ +QTT+ ET E + + K +F N + IC
Sbjct: 186 ----QVKNPD----KLIWLSQTTLSVDETMETVRRLRK----RFP----NLQDPPSDDIC 229
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
AT RQ A+ K + + DL++VV A S + E + G K +Y++ V+
Sbjct: 230 YATTNRQAAI-KTIAPQSDLVIVVGSANSSN--SVRL-VEVALDHGAKASYRVDFANEVD 285
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E W +G T+G+TSGAS P+ V +V+ + E
Sbjct: 286 -EAWF-EGVSTVGVTSGASVPEVLVREVVALLAE 317
>gi|153937572|ref|YP_001387604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. Hall]
gi|152933486|gb|ABS38985.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A str. Hall]
Length = 638
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +++
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISIQD 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 62 ----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GANINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT + E++ ++ K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ + K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQSAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|422648033|ref|ZP_16711158.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330961572|gb|EGH61832.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 144/349 (41%), Gaps = 83/349 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + + + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAANGGAIYLVEDEDDVATLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
S F QTT+ +T + ++ + + F +
Sbjct: 158 NPDSLAF-----------VTQTTLSMDDTSRV-------------IDALRQRFPAIGGPR 193
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRI 307
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 194 KDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM 252
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 -----------------QQSWF-DGVQHIGITAGASAPEVLVRGVIQQL 283
>gi|319795327|ref|YP_004156967.1| hydroxymethylbutenyl pyrophosphate reductase [Variovorax paradoxus
EPS]
gi|315597790|gb|ADU38856.1| hydroxymethylbutenyl pyrophosphate reductase [Variovorax paradoxus
EPS]
Length = 322
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 144/345 (41%), Gaps = 81/345 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE GFC GV+RA++I A +F I++ +EI+HN V L+ A I +E
Sbjct: 7 EVLLAEPRGFCAGVDRAIEIVERAIAKF-GAPIYVRHEIVHNTYVVNELK--AKGAIFIE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
E V G +V A G AVE+ ++ +I D TCP V+KV V K K
Sbjct: 64 E----LSDVPPGATLVFSAHGVSKAVEQ--EARDRGFEIFDATCPLVTKVHVEVAKLAKE 117
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y I+ G H E T G+L+ E +
Sbjct: 118 GYEFIMIGHKGHPEVEGTM------------------------GQLSSGIHLVEDVADVA 153
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
K VS G K+ + QTT+ + E + NV E I
Sbjct: 154 K--VSPG-----QTDKLAVVTQTTL------SVDDAAEIAAAVRARFPNVREP--KQQDI 198
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K++ +VDL++VV E+A+ G SY +DS + P
Sbjct: 199 CYATQNRQDAV-KIMSPQVDLVIVVGSPTSSNSNRLRELAQRLGTESYMVDSADELKP-- 255
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W +G+ +GIT+GAS P+ V +V+ +V
Sbjct: 256 ---------------EWF-EGKSRVGITAGASAPEVLVREVIDRV 284
>gi|433455899|ref|ZP_20413966.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
crystallopoietes BAB-32]
gi|432197011|gb|ELK53423.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
crystallopoietes BAB-32]
Length = 361
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 54/337 (16%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G +V LA G+C GV+RAV IA E + +++ +I+HN V LEE I
Sbjct: 31 GPRRVLLAAPRGYCAGVDRAV-IAVEKALEHYGPPVYVRKQIVHNVHVVSTLEEKGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE D V +G++VV A G + + + ++ ++ +D TCP V+KV + +
Sbjct: 88 FVEE----TDEVPEGELVVFSAHGVSPAVVQSAADRQLRTIDATCPLVTKVHREAVRFAR 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
D ++ G HEE T A ++ IV N EA V
Sbjct: 144 DDNEILLIGHEGHEEVEGTYGEAPEHTTIVNNPAEARTV--------------------- 182
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ DPD K+ +QTT+ ET EI ++ + +F N +
Sbjct: 183 -------QVRDPD----KLIWLSQTTLSVDETMEIVSILRE----RFP----NLQDPPSD 223
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
IC AT RQ A+ K + + DL++VV A S + E + G K ++++
Sbjct: 224 DICYATSNRQAAI-KKIAPQADLVIVVGSANSSN--SVRL-VEVALEYGAKASHRVDFAN 279
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E+W +G TIG+TSGAS P+ V +VL + E
Sbjct: 280 QVD-ESWF-EGVSTIGVTSGASVPEVLVREVLSLLAE 314
>gi|94263345|ref|ZP_01287160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
gi|93456300|gb|EAT06430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
Length = 361
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 84/334 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RAV+ E ++ I +IHNP V L + V+ +
Sbjct: 85 MKVILAKHAGFCMGVRRAVETTLELVEKS-RGPIATFGPLIHNPQVLTMLGQKGVEVL-- 141
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE +Q ++G VV+ A G +L + D TCP V KV ++K+++
Sbjct: 142 EEVPEQ----SQGTVVIR-AHGVPPARKQSLEESGAVVEDATCPRVVKVQAIIDKYRRQG 196
Query: 145 YTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
YT++I G H E AG+ +++ +M+E + G EL K ++
Sbjct: 197 YTTVIVGDRDHAEVEGLVGHAGEVGLVISSMEELD-------GLEL------KPPYI--- 240
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ +QTT + EE+ +L+ ++ +F V FNTI
Sbjct: 241 ------------------VVSQTT----QDEEMFQLITAGVLSRFPGGKV------FNTI 272
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
CD+T +RQD + +M + VD ++VV EIA P + +++E +
Sbjct: 273 CDSTHKRQDEVREMCRQ-VDALVVVGGRNSANTKRLAEIARGLACPVFLVETEAELQFEQ 331
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
Y+ ++G+T+GASTP
Sbjct: 332 MRRYQ------------------SVGVTAGASTP 347
>gi|398949038|ref|ZP_10673077.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM33]
gi|398159761|gb|EJM48049.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM33]
Length = 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 93/354 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ L ++ K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASSGGAIYLVEDEKDV---------AALQVNNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + ++ + F +
Sbjct: 165 V-----------------------TQTTLSMDDTSRV-------------IDALRSRFPA 188
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID
Sbjct: 189 IGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLID 247
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +++W G IGIT+GAS P+ V V++++
Sbjct: 248 GAEDL-----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|395499135|ref|ZP_10430714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
PAMC 25886]
Length = 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 146/354 (41%), Gaps = 93/354 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------------------- 151
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
A + +P+ K+ QTT+ +T + ++ + F +
Sbjct: 152 ------AALQVHNPE----KLAFVTQTTLSMDDTSRV-------------IDALRSRFPA 188
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID
Sbjct: 189 IGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLID 247
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + + +W G IGIT+GAS P+ V V++++
Sbjct: 248 GAEDM-----------------QRSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|336451589|ref|ZP_08622026.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Idiomarina sp. A28L]
gi|336281402|gb|EGN74682.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Idiomarina sp. A28L]
Length = 318
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 74/341 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+K+ LA GFC GV+RA+ I +A F I++ +E++HN V L E + V
Sbjct: 1 MKIILANPRGFCAGVDRAITIVEQALAMF-SPPIYVRHEVVHNKHVVDGLRERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + T + +++ D TCP V+KV V + + +
Sbjct: 58 EE----LDQVPDDSIVIFSAHGVSRAVRDTATARGLKVFDATCPLVTKVHMEVTRASRRN 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+ ++ G H E T G+Y AE G + S + K K
Sbjct: 114 HECVLIGHAGHPEVEGT---MGQY------SSAE--------GGIYLVESVADVATLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ + +QTT+ +T +I ++ +R N+N + IC
Sbjct: 157 NSDELHY-----------MSQTTLSVDDTADI---IDALRVR---FPNINGP--RKDDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ + E VD++LVV E+AE G +Y ID I
Sbjct: 198 YATQNRQDAVRDLAHE-VDVLLVVGARNSSNSNRLAELAEKMGTRAYLIDDASCI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
WL G T+G+T+GAS P+ V++V+
Sbjct: 252 ------------DTQWL-AGAATVGVTAGASAPEVLVKNVV 279
>gi|431807031|ref|YP_007233929.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli P43/6/78]
gi|430780390|gb|AGA65674.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli P43/6/78]
Length = 577
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 53/332 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV++ + GFC GV+ AV+ + + EE I++ +IHNP LE+ V+
Sbjct: 1 MKVEIGKFAGFCDGVKYAVEKTFSQASKSSEE-IYVDGHLIHNPQTLDMLEKTGVKT--Y 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + V++ V++ A G + E L++ +IV+ TC +V+K+ V+KH
Sbjct: 58 EDTEDDMSVLDDKTVII-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y I+ G +H E + FA +V K+ +EK
Sbjct: 117 YRVIVIGNPTHPEIIGVCGFAKDVYVV-----------------------YKDEDIEKL- 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+ D K I QTT+ K E K V + + K+ N I NTIC
Sbjct: 153 --------PEDD-KKTLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT++RQ+ + + ++ D++LV+ +E + + +I K ++ + E +E
Sbjct: 196 EATEQRQNEILD-IAKRNDVVLVIGGSESSNTRNLY-----KIASSIKPSFYVEFKEDLE 249
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K + P +GI +GASTPD +ED+ + +
Sbjct: 250 KIDLTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|347531958|ref|YP_004838721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Roseburia
hominis A2-183]
gi|345502106|gb|AEN96789.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Roseburia
hominis A2-183]
Length = 283
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 159/350 (45%), Gaps = 89/350 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEE---MAVQN 81
+ V LA+S GFC+GV+RAV YE + +E ++ IIHN V + LEE + V +
Sbjct: 1 MNVILAKSAGFCFGVKRAVDTVYE--RILEKEPLYTFGPIIHNEEVVRDLEEKGVVVVND 58
Query: 82 IPVEEGKKQFDVVNKGDVVVLPAFG---AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVE 138
+ GK Q V++ A G E++ TL IVD TCP+V K+ VE
Sbjct: 59 VDELAGKPQ-------GTVIIRAHGVERGVCEKIQTLG---FSIVDATCPFVLKIHRLVE 108
Query: 139 KHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA 198
++ D +I G SH E S++ N ++ + + +EA
Sbjct: 109 RYSGEDCHIVIVGNASHPEVKGIKSWS-------NAEDTRVI------------GTREEA 149
Query: 199 FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI 258
EK+ + K KV I +QTT + +E LVE ++++ G + I
Sbjct: 150 --EKYDASHGK---------KVCIVSQTTFNYNKFQE---LVE--IIKEKGYD-----II 188
Query: 259 SFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
NTIC+AT+ERQ + + E+VD ++V+ EI ++ +Y+I + K
Sbjct: 189 VLNTICNATEERQTEA-RAIAEQVDAMIVIGGRNSSNTQKLFEICKNECKNTYYIQTVK- 246
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
L E+ +N +GIT+GASTP+ +E+V K V
Sbjct: 247 ---------DLDLAEVRSVDN--------VGITAGASTPNNIIEEVQKNV 279
>gi|451341059|ref|ZP_21911535.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
gi|449416074|gb|EMD21851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
Length = 337
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G +V LA+ G+C GV+RAV IA E + +++ EI+HN V + L + V I
Sbjct: 24 GGKRVLLAKPRGYCAGVDRAV-IAVEKALELYGAPVYVRKEIVHNRHVVETLRDRGV--I 80
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E + V +G++VV A G + +N++ +D TCP V+KV V + K
Sbjct: 81 FVDETSE----VPEGELVVFSAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFAK 136
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
DY ++ G HEE TA A + + + E
Sbjct: 137 DDYDILLIGHEGHEEVEGTAGEAPDKVQLVDTAE-------------------------- 170
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-- 260
DVD V+V ++ L T V++TM R V+ + + F
Sbjct: 171 -----------DVDKVEVRDPSKVIWLSQTTLS----VDETMER---VDQLRDRFPGLAD 212
Query: 261 ---NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKL 317
+ IC AT RQ A+ M E DL+LVV +S++ + K +
Sbjct: 213 PPSDDICYATTNRQVAVKAMAAE-CDLVLVVGSTNSS-------NSKRLVEVALKAGARA 264
Query: 318 MHGELVE-----KENWLPKGQITIGITSGASTPDKAVEDVL 353
H LV+ E WL +G T+G+TSGAS P+ V D+L
Sbjct: 265 SH--LVDFAHEVDEAWL-EGVETVGVTSGASVPEVLVMDLL 302
>gi|402838566|ref|ZP_10887071.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Eubacteriaceae
bacterium OBRC8]
gi|402272780|gb|EJU21996.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Eubacteriaceae
bacterium OBRC8]
Length = 277
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 63/330 (19%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
L++ G+C+GV+RA+ IA + ++ K++ IIHN ++LE +Q +
Sbjct: 5 LSKFSGYCYGVKRAISIAQNSIEELG--KVYSLGSIIHNKRAVEKLENQGLQIVD----- 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV-EKHKKGDYTS 147
D+ ++ + G + N V I+DTTC +V K+ V +K+K G+
Sbjct: 58 ---DIDKNYKNILFRSHGVEKKFYNFANEHGVNIIDTTCTFVKKIHQIVADKYKSGNEII 114
Query: 148 IIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
II G SH E + S+ CDY + G E +EK K
Sbjct: 115 II-GNKSHPEVIGINSW----------------CDYT--AQFVGD----EKDVEKLK--- 148
Query: 208 SKGFDPDVDLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTICDA 266
D + + V V QTT + EEI K+ EKT E+ FNTIC+A
Sbjct: 149 ---IDKNCNYVLVF---QTTFNIEKYEEIVSKISEKT-----------ENLEIFNTICNA 191
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T++RQDA+ + + EKVD+I+V+ D+ +S+K + + + E +
Sbjct: 192 TKKRQDAILE-ISEKVDMIVVI---GDKSSS----NSKKLYELASSRCKSIFVEDCSELD 243
Query: 327 NWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +GIT+GASTPD +++V+K +
Sbjct: 244 QSMFENVKNLGITAGASTPDFVIDEVIKYI 273
>gi|358467846|ref|ZP_09177516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. oral taxon 370 str. F0437]
gi|357066676|gb|EHI76817.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. oral taxon 370 str. F0437]
Length = 827
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 65/334 (19%)
Query: 30 AESYGFCWGVERAVQIAYEARKQFPEEK--IWITNEIIHNPTVNKRLEEMAVQNIPVEEG 87
A+ GFC+GV A+ + EEK +I ++HN V + +E + + EE
Sbjct: 6 AKHMGFCFGVLEAINVC----NSLIEEKGRKYILGMLVHNKQVVEDMERKGFKLVKEEEL 61
Query: 88 KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTS 147
+ D + + D+VV+ A G + + L + V+I D TC +V+K+ +E + Y
Sbjct: 62 LEDIDDLKENDIVVVRAHGTSKKVHEKLKERKVKIYDATCVFVNKIRQEIEIANEKGYNI 121
Query: 148 IIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV 207
+ G +H E SFA I ++++EA
Sbjct: 122 LFMGDKNHPEVKGVISFADNIQIFESLEEA------------------------------ 151
Query: 208 SKGFDPDVDLVKVG-IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
D +DL K ++ QTT+ K + EE+ +K+ EN ++ I F+ IC A
Sbjct: 152 ---MDVKIDLEKTYLLSTQTTLNKKKFEEV---------KKYFKENY-QNVIIFDKICGA 198
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T RQ A+ ++ K DL+++V + + S+K N +Y LVE E
Sbjct: 199 TAVRQKAVEELA-IKADLVIIVGDTKSSNTKKLYEISKKL----NSESY------LVENE 247
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKKV 356
L +G+ IGIT+GASTP++ + ++ KK+
Sbjct: 248 EQLDLTIFRGRKVIGITAGASTPEETIMNIEKKI 281
>gi|254419477|ref|ZP_05033201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brevundimonas
sp. BAL3]
gi|196185654|gb|EDX80630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brevundimonas
sp. BAL3]
Length = 323
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 55/336 (16%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V+LA GFC GV+RA+QI A K++ +++ +EI+HN V +RL+ M +
Sbjct: 15 IAVRLATPRGFCAGVDRAIQIVERAIKKY-GAPVYVRHEIVHNRHVVERLKSMGAIFV-- 71
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
K+ D VV A G + + +D TCP VSKV E+H
Sbjct: 72 ----KELDECPDDRPVVFSAHGVPKSVPANAQARQLLFLDATCPLVSKVHVEAERHHDAG 127
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSST--KEAFLEK 202
I+ G H E + T +G G+ S EA E
Sbjct: 128 RHIILIGHAGHPEVIGT-----------------------MGQLPPGAISLIETEADAES 164
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
F++ G P + A QTT+ +T I K+++ R+F E + H
Sbjct: 165 FER---PGDAP------LAYATQTTLSVDDTAGILKVLK----RRFP-ELPDPH---KED 207
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
IC AT RQDA+ K++ E +L+LVV +++ + ++ R G + +L+
Sbjct: 208 ICYATTNRQDAV-KVLGEGCELVLVVG-SKNSSNSARLVEVAMRAGARDA---RLVDDAS 262
Query: 323 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+W G T+G+T+GAS P+ + ++ + E
Sbjct: 263 QVDWSWF-DGVQTVGVTAGASAPEPLIAALVDAIAE 297
>gi|359408156|ref|ZP_09200628.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [SAR116
cluster alpha proteobacterium HIMB100]
gi|356676913|gb|EHI49262.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [SAR116
cluster alpha proteobacterium HIMB100]
Length = 320
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 141/336 (41%), Gaps = 59/336 (17%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GV+RA++I A +++ +++ +EI+HN V L +
Sbjct: 14 VILASPRGFCAGVDRAIKIVEVALEKY-GRPVYVRHEIVHNKRVVNDLAAKGAVFV---- 68
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
K+ D V G V+ A G A T + N+ +D TCP V+KV KH +
Sbjct: 69 --KELDEVPDGRPVIFSAHGVAKIVHQTAQDLNMIAIDATCPLVTKVHIEASKHARNGRH 126
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
++ G H E + T G++N + T +E + A
Sbjct: 127 ILLIGHAGHPEVIGTM------------------------GQVNAAEIT---LIETVEDA 159
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
++ P + ++ A QTT+ ET EI +++ G + + IC A
Sbjct: 160 LA--VQPP-EHCELAFATQTTLSADETAEIITVLQHRFPEIRGPKGED--------ICYA 208
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
T RQ+A+ M EE VDL LV+ A + +++ + G + +L+
Sbjct: 209 TTNRQNAVKAMAEE-VDLCLVIG-ASNSSNSKRLVETALKAGVAD--------AQLIADA 258
Query: 327 NWLPKGQI----TIGITSGASTPDKAVEDVLKKVFE 358
LP I IG+T+GAS P E+VL + E
Sbjct: 259 TALPFDLIDKADVIGLTAGASAPKILTEEVLAALSE 294
>gi|74317878|ref|YP_315618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiobacillus
denitrificans ATCC 25259]
gi|74057373|gb|AAZ97813.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, LytB protein
[Thiobacillus denitrificans ATCC 25259]
Length = 308
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 140/344 (40%), Gaps = 81/344 (23%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA GFC GV+RA+ I A ++F I++ +E++HN V L+ + VEE
Sbjct: 5 VLLANPRGFCAGVDRAIAIVERALEKF-GAPIYVRHEVVHNTFVVDDLKRKGA--VFVEE 61
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
V G V+ A G + + + + D TCP V+KV V K + Y
Sbjct: 62 ----LSEVPAGATVIFSAHGVSQAVRTEAAARGLTVFDATCPLVTKVHVEVSKMRDKGYE 117
Query: 147 SIIHGKYSHEETVAT--ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T S G Y++ E G +T E
Sbjct: 118 IVMIGHKGHPEVEGTLGQSAGGMYLV-----------------ETPGDVATLEV------ 154
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+PD + QTT+ ++ ++V+ R + + + IC
Sbjct: 155 ------TNPDC----LAYVTQTTL---SVDDAARVVDALRARFPTITGPKK-----DDIC 196
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + + D+++VV E+AE+ GI +Y +D+ I P
Sbjct: 197 YATQNRQDAV-KHLASQCDVVIVVGSPTSSNSNRLREVAENLGIAAYMVDNADEIDP--- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W+ G +G+T+GAS PD V V+ ++
Sbjct: 253 --------------RWV-SGNQRVGVTAGASAPDVLVRAVIDRL 281
>gi|254000305|ref|YP_003052368.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus
glucosetrophus SIP3-4]
gi|253986984|gb|ACT51841.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus
glucosetrophus SIP3-4]
Length = 308
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 153/353 (43%), Gaps = 81/353 (22%)
Query: 29 LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK 88
LA GFC GV+RA+ I +A ++F I++ +E++HN V L+ I
Sbjct: 5 LANPRGFCAGVDRAIIIVEQALEKF-GAPIYVRHEVVHNKFVVDELKRKGAVFI------ 57
Query: 89 KQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148
++ + V G+ V+ A G + E + +++ D TCP V+KV V K ++ +
Sbjct: 58 EELEEVPPGNTVIFSAHGVSREVRTDAEARGLRVFDATCPLVTKVHNEVAKMRQDGKEIV 117
Query: 149 IHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+ G H E T S G Y++ S ++ + K
Sbjct: 118 MIGHKGHPEVEGTMGQSDGGMYLV----------------------ESPEDVVNLQVK-- 153
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
D K+ QTT+ ++ +V + KF + + + ++IC A
Sbjct: 154 ---------DPAKLAYVTQTTL---SIDDAASIV-AALKDKFPLISAPKS----DSICYA 196
Query: 267 TQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKIA 314
TQ RQDA+ M ++ DL++VV E+A+++GI SY +D+ +
Sbjct: 197 TQNRQDAVKAMAKD-CDLVIVVGSPNSSNSNRLREVAQNQGIESYMVDNASYL------- 248
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
WL G+ IG+++GAS P+ V++V++++ E+ E +L
Sbjct: 249 ----------NAEWL-AGKKRIGVSAGASAPEILVKEVIQRLQEMGAAEVTEL 290
>gi|377568237|ref|ZP_09797432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia terrae
NBRC 100016]
gi|377534564|dbj|GAB42597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia terrae
NBRC 100016]
Length = 317
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 52/333 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A + +++ EI+HN V + L E +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNRHVVETLAERGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + T +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGAIVVFSAHGVSPLVHQTAAERNLRTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + ++G S + K
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPEHIQL-----------------VDGPDSVDSVTVRDESK 161
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
V +QTT+ ET E + + KF + N + IC
Sbjct: 162 LV--------------WLSQTTLSVDETME----TVRRLREKFPLLNDP----PSDDICY 199
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ M E DL++VV S + E + G + + + + ++
Sbjct: 200 ATQNRQVAVKAMAPE-CDLVIVV--GSQNSSNSVRL-VEVALQAGARAGHLVDYAREID- 254
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL +G T+G+TSGAS P+ V VL + E
Sbjct: 255 ETWL-EGVTTVGVTSGASVPEVLVRGVLDYLAE 286
>gi|409389319|ref|ZP_11241171.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
rubripertincta NBRC 101908]
gi|403200611|dbj|GAB84405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
rubripertincta NBRC 101908]
Length = 317
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 52/333 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A + +++ EI+HN V + L + +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNRHVVETLADRGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + + + +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGAIVVFSAHGVSPQVHASAAERNLRTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + ++G S + K
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPQHIQL-----------------VDGPDSVDAVTVRDESK 161
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
V +QTT+ ET E + + KF + N + IC
Sbjct: 162 LV--------------WLSQTTLSVDETME----TVRRLREKFPLLN----DPPSDDICY 199
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ M E DL++VV S + E + G K + + + ++
Sbjct: 200 ATQNRQIAVKAMAPE-CDLVIVV--GSQNSSNSVRL-VEVALQAGAKAGHLVDYAREID- 254
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E WL +G T+G+TSGAS P+ V VL + E
Sbjct: 255 ETWL-EGVNTVGVTSGASVPEVLVRGVLDYLAE 286
>gi|94265750|ref|ZP_01289486.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
gi|93453725|gb|EAT04103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
Length = 337
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 84/334 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RAV+ E ++ I +IHNP V L + V+ +
Sbjct: 61 MKVILAKHAGFCMGVRRAVETTLELVEKS-RGPIATFGPLIHNPQVLTMLGQKGVEVL-- 117
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE +Q ++G VV+ A G +L + D TCP V KV ++K+++
Sbjct: 118 EEVPEQ----SQGTVVIR-AHGVPPARKQSLEESGAVVEDATCPRVVKVQAIIDKYRRQG 172
Query: 145 YTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
YT++I G H E AG+ +++ +M+E + G EL K ++
Sbjct: 173 YTTVIVGDRDHAEVEGLVGHAGEVGLVISSMEELD-------GLEL------KPPYI--- 216
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ +QTT + EE+ +L+ ++ +F V FNTI
Sbjct: 217 ------------------VVSQTT----QDEEMFQLITAGVLSRFPGGKV------FNTI 248
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
CD+T +RQD + +M + VD ++VV EIA P + +++E +
Sbjct: 249 CDSTHKRQDEVREMCRQ-VDALVVVGGRNSANTKRLAEIARGLACPVFLVETEAELQFEQ 307
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTP 345
Y+ ++G+T+GASTP
Sbjct: 308 MRRYQ------------------SVGVTAGASTP 323
>gi|338740582|ref|YP_004677544.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
sp. MC1]
gi|337761145|emb|CCB66978.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
sp. MC1]
Length = 309
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 144/347 (41%), Gaps = 83/347 (23%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA+ GFC GV RA+ A + +++ +EI+HN V + L+ + +
Sbjct: 1 MKVILAQPRGFCAGVVRAIDTVERALAHR-DGPVYVRHEIVHNRHVVEDLKAKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
+ DV N G V + A G + VE+ L NV VD TCP VSKV +++
Sbjct: 58 ---EDLADVPN-GSVTIFSAHGVSHSVEDEARLRRLNV--VDATCPLVSKVHKQGQRYSS 111
Query: 143 GDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
T I+ G H E T +G +V+N ++ +L+ T A++
Sbjct: 112 LGRTIILIGHAGHVEIEGTLGRISGPVYLVENGEDV---------AKLDIPDDTPVAYI- 161
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
QTT+ +T + V+K G E +
Sbjct: 162 ----------------------TQTTLSVDDTRSTIEAVKKRFTDVIGPETRD------- 192
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ + V+L+LVV EI + G+PSY +
Sbjct: 193 -ICYATQNRQTAVRDLCRH-VELLLVVGASNSSNSNRLREIGSECGVPSYLV------AD 244
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
G+K+ WL G T+G+T+GAS PD V+DVL +
Sbjct: 245 GSKVDLA-----------WL-AGVATVGVTAGASAPDVLVQDVLAAI 279
>gi|398844017|ref|ZP_10601127.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM84]
gi|398254986|gb|EJN40033.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM84]
Length = 315
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 147/346 (42%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RETILIGHEGHPEVEGT---MGQY-------------DASNGGAI---------YLVEDE 148
Query: 205 KAVSKGF--DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V+K +PD + QTT+ +T + + G +
Sbjct: 149 EDVAKLQVKNPD----HLAFVTQTTLSMDDTSRVIDALRARFPNIGGPRK--------DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ +E D++LVV E+AE G P+Y ID + +
Sbjct: 197 ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDM--- 252
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W + IGIT+GAS P+ V V+ ++
Sbjct: 253 --------------QRDWFDQAA-RIGITAGASAPEVLVRGVIDQL 283
>gi|422324387|ref|ZP_16405424.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
mucilaginosa M508]
gi|353344443|gb|EHB88755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
mucilaginosa M508]
Length = 361
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 151/342 (44%), Gaps = 64/342 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V + LE+ I
Sbjct: 31 GEKKVLLATPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKQIVHNRHVVETLEKQGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G V V A G + + ++++ +D TCP V+KV + K
Sbjct: 88 FVDE----VDEVPEGSVTVFSAHGVSPAVVSAAGDRSLNTIDATCPLVNKVHREAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
DY ++ G HEE TA A ++I IV + E + V
Sbjct: 144 QDYDILLIGHTGHEEVEGTAGEAPEHIQIVNSPDEVDQVTVR------------------ 185
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
+P+ KV +QTT+ ET E V + E F S
Sbjct: 186 ----------NPE----KVVWISQTTLSVDETLET-------------VARLRERFPSLQ 218
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+ IC AT RQ A+ K + + DL++VV A S + E + G K A +
Sbjct: 219 DPPSDDICYATSNRQGAI-KEIAPRADLVIVVGSANSSN--SVRL-KEVALEYGAKRAER 274
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ V+ E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 275 VDFAHQVD-ESWF-EGVATVGLTSGASVPEVLVQEVLALLAE 314
>gi|283457634|ref|YP_003362218.1| penicillin tolerance protein [Rothia mucilaginosa DY-18]
gi|283133633|dbj|BAI64398.1| penicillin tolerance protein [Rothia mucilaginosa DY-18]
Length = 361
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 151/342 (44%), Gaps = 64/342 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V + LE+ I
Sbjct: 31 GEKKVLLATPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKQIVHNRHVVETLEKQGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G V V A G + + ++++ +D TCP V+KV + K
Sbjct: 88 FVDE----VDEVPEGSVTVFSAHGVSPAVVSAAGDRSLNTIDATCPLVNKVHREAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
DY ++ G HEE TA A ++I IV + E + V
Sbjct: 144 QDYDILLIGHTGHEEVEGTAGEAPEHIQIVNSPDEVDQVTVR------------------ 185
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
+P+ KV +QTT+ ET E V + E F S
Sbjct: 186 ----------NPE----KVVWISQTTLSVDETLET-------------VARLRERFPSLQ 218
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+ IC AT RQ A+ K + + DL++VV A S + E + G K A +
Sbjct: 219 DPPSDDICYATSNRQGAI-KEIAPRADLVIVVGSANSSN--SVRL-KEVALEYGAKRAER 274
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ V+ E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 275 VDFAHQVD-ESWF-EGVATVGLTSGASVPEVLVQEVLALLAE 314
>gi|187921663|ref|YP_001890695.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phytofirmans PsJN]
gi|187720101|gb|ACD21324.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
phytofirmans PsJN]
Length = 314
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 142/344 (41%), Gaps = 83/344 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LA+ GFC GV RA++I A +Q +++ +EI+HN V L + + +
Sbjct: 1 MRVILAQPRGFCAGVVRAIEIVDRALQQH-GAPVYVRHEIVHNRHVVDNLRQKGARFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D V +G V + A G A + + ++D TCP V+KV ++
Sbjct: 58 ----EELDEVPQGAVAIFSAHGVAQTVERDAEARGLDVLDATCPLVTKVHVQGRQYVGAG 113
Query: 145 YTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
T I+ G H E T GK ++V++ E +
Sbjct: 114 RTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAEVAH------------------------ 149
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT- 262
D VD + QTT+ +T I ++R+F + +T
Sbjct: 150 -------LDLPVD-TPLAYVTQTTLSVDDTRGI----IDALLRRF------TDIVGPDTR 191
Query: 263 -ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQ A+ ++ ++VD++LVV EI + G+ SY + + P
Sbjct: 192 DICYATQNRQAAVREL-SKQVDVLLVVGATNSSNSNRLREIGSESGVASYLVADGSEVKP 250
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
W Q T+GIT+GAS P++ V++V+
Sbjct: 251 -----------------EWFANVQ-TVGITAGASAPEEMVKNVI 276
>gi|378550021|ref|ZP_09825237.1| hypothetical protein CCH26_08034 [Citricoccus sp. CH26A]
Length = 366
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 54/337 (16%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G+ KV LA G+C GV+RAV +A E + +++ EI+HN V + LE+ V +
Sbjct: 36 GDKKVLLAAPRGYCAGVDRAV-VAVEKALEHHGAPVYVRKEIVHNRHVVETLEQQGV--V 92
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE D V +G + V A G + + ++ ++ +D TCP V+KV + +
Sbjct: 93 FVEE----LDEVPEGSLTVFSAHGVSPAVVNEAADRGLRTIDATCPLVTKVHREAVRFAR 148
Query: 143 GDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
D ++ G HEE T A ++ I+ N EA V
Sbjct: 149 QDRRILLIGHEGHEEVEGTYGEAPEHTTIINNPDEARTV--------------------- 187
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ DPD +L+ + +QTT+ ET EI ++ + +F N +
Sbjct: 188 -------QVEDPD-NLIWL---SQTTLSVDETLEIVSILRE----RFP----NLQDPPSD 228
Query: 262 TICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321
IC AT RQ A+ K + + DL+++V A S + E + G + A ++
Sbjct: 229 DICYATSNRQAAI-KRISPQCDLMIIVGSANSSN--SVRL-KEVALEYGAQRAERVDFAH 284
Query: 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E+W +G T+G++SGAS P+ V+DVL+ + E
Sbjct: 285 QVD-ESWF-EGAATVGLSSGASVPEVLVQDVLRLLAE 319
>gi|257454797|ref|ZP_05620048.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enhydrobacter
aerosaccus SK60]
gi|257447730|gb|EEV22722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enhydrobacter
aerosaccus SK60]
Length = 322
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 154/344 (44%), Gaps = 79/344 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IP 83
+K+ LA GFC GV+RA++I ++F E I++ +E++HN V +E++A + +
Sbjct: 1 MKILLANPRGFCAGVDRAIEIVNVCLERF-EPPIYVRHEVVHNKFV---VEDLANRGAVF 56
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 141
VEE + V G +V+ A G AVE+ +++ + D TCP V+KV V K
Sbjct: 57 VEE----LNEVPDGAIVIFSAHGVSKAVEDEA--ERRDLTVFDATCPLVTKVHIEVNKFA 110
Query: 142 KGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
K +++ G H E T G++ D GG ++ +E
Sbjct: 111 KTGVDAVLIGHAGHPEVEGT---MGRF-------------DPQYGGRIH--------LIE 146
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN 261
+ D DL V QTT+ +T E V + KF H +
Sbjct: 147 DVVDVANLDLPTDTDLAFV---TQTTLSMDDTAE----VIDALKNKFP----KIHAPRKD 195
Query: 262 TICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGP 309
IC ATQ RQDA+ K + + ++LVV E+AE G ++ ID+
Sbjct: 196 DICYATQNRQDAV-KELAARCQVVLVVGSPNSSNSNRLRELAERLGAKAHLIDNA----- 249
Query: 310 GNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
GE+ +++W G T+G+T+GAS P+ +++VL
Sbjct: 250 ----------GEM--QKDWF-AGVDTVGVTAGASAPEVLIQEVL 280
>gi|398931138|ref|ZP_10664997.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM48]
gi|398164281|gb|EJM52423.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM48]
Length = 315
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 147/350 (42%), Gaps = 85/350 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ +GS+ +E K
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDGSNGGAIYLVEDEK 149
Query: 205 K-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF--- 260
A + +P+ K+ QTT+ +T + ++ + F +
Sbjct: 150 DVAALQVKNPE----KLAFVTQTTLSMDDTSRV-------------IDALRSRFPAIGGP 192
Query: 261 --NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKR 306
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID +
Sbjct: 193 RKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLIDGAED 251
Query: 307 IGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +++W G IGIT+GAS P+ V V++++
Sbjct: 252 L-----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|451812267|ref|YP_007448721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778169|gb|AGF49117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 316
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 150/350 (42%), Gaps = 81/350 (23%)
Query: 18 FEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEM 77
F+ + + LA GFC GV+RA+ I +A + +++ +EI+HN V ++
Sbjct: 3 FKISISKKDITLAAPRGFCAGVKRAIAIVEKAIALY-GPIVYVNHEIVHNKHVIDYFKDK 61
Query: 78 AVQNIPVEEGKKQFDVVN--KGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWT 135
V + +++N G+V++ A G + + + N K ++IVD TCP V+KV
Sbjct: 62 GVIFVD--------NIINVPDGNVIIFSAHGVSKDMIAIANKKKLRIVDATCPLVTKVHL 113
Query: 136 SVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSST 195
V K ++ + II G H E T LG +++G
Sbjct: 114 EVLKMRRENREVIIIGHKDHPEVNGT-----------------------LGQDVSG---- 146
Query: 196 KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNE 255
++ + VS+ D +L +G QTT+ + I + + + G +
Sbjct: 147 --IYVVENISDVSRLSINDSEL--LGYVTQTTLSLDDISCIEEALRNRFPKIVGPKK--- 199
Query: 256 HFISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
+ IC ATQ RQ+A+ +V++ DL+LVV E+A G+ SY ID
Sbjct: 200 -----SDICYATQNRQNALKYIVKD-CDLVLVVGSNNSSNSTRLLELARRGGVESYLIDG 253
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
I +WL G+ IGITSGAS P+ VE V+
Sbjct: 254 FDSI-----------------DLSWL-NGKKHIGITSGASAPEIIVEQVI 285
>gi|296128824|ref|YP_003636074.1| hydroxymethylbutenyl pyrophosphate reductase [Cellulomonas
flavigena DSM 20109]
gi|296020639|gb|ADG73875.1| hydroxymethylbutenyl pyrophosphate reductase [Cellulomonas
flavigena DSM 20109]
Length = 351
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 144/347 (41%), Gaps = 80/347 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV IA E + +++ EI+HN V L +
Sbjct: 20 RVLLAAPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKEIVHNRHVVDTLAARGAVFV--- 75
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV A G + + +N+Q +D TCP V+KV + D+
Sbjct: 76 ---DETDEVPEGARVVFSAHGVSPAVKASAAARNLQTIDATCPLVTKVHKEAVRFAADDF 132
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE T A ++I +V + +A++V E+
Sbjct: 133 DILLIGHTGHEEVEGTQGHAPEHIQVVNSPDDADHV-------EVR-------------- 171
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP+ +V +QTT+ ET E +R+ V+ + + IC
Sbjct: 172 -------DPE----RVMWISQTTLSVDETME--------TVRRLRVKFPHLQDPPSDDIC 212
Query: 265 DATQERQDAMYKMVEEKVDLIL------------VVEIAEDRGIP-SYWIDSEKRIGPGN 311
ATQ RQ A+ K+ D+++ +VE+A D G SY +D I P
Sbjct: 213 YATQNRQVAVKKLA-PSCDVVITVGSANSSNSVRLVEVALDAGAGVSYRVDKAAEIDPA- 270
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
WL G T+G+TSGAS P+ V DVL + E
Sbjct: 271 ----------------WL-VGATTVGVTSGASVPEILVSDVLAFLAE 300
>gi|49085104|gb|AAT51252.1| PA4557, partial [synthetic construct]
Length = 315
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 73/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V L + I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNKFVVDNLRQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPNNVIVIFSAHGVSQAVRKEAEGRGLKVFDATCPLVTKVHMEVVRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+ ++ G H E T G+Y D GG + + + +
Sbjct: 114 HECVLIGHEGHPEVEGT---MGQY-------------DASNGGAIYLVEDEADVAALEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K + + QTT+ +T ++ + + G N IC
Sbjct: 158 KPEALHY-----------VTQTTLSMDDTSKVIDALRAKFPQIQGPRK--------NDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + ++ D++LVV E+AE G P+Y ID + +
Sbjct: 199 YATQNRQDAV-KELADQCDMVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ W G IGIT+GAS P+ V V+ ++ E
Sbjct: 253 ------------QRGWF-DGVRRIGITAGASAPEVLVRGVIAQLRE 285
>gi|421835770|ref|ZP_16270433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein, partial [Clostridium botulinum
CFSAN001627]
gi|409742492|gb|EKN41873.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein, partial [Clostridium botulinum
CFSAN001627]
Length = 277
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 146/336 (43%), Gaps = 65/336 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L++ ++ I +
Sbjct: 1 MNVILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKDKGIEPISI 59
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
++ D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ +
Sbjct: 60 QD----VDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEG 115
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E + + I+ S A +
Sbjct: 116 YKIVIVGDENHPEVIGINGWCNNSAII----------------------SKDGANINNLD 153
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K KV + QTT + E++ ++ K + ++FNTIC
Sbjct: 154 K-------------KVCVLCQTTEKQENWEKVLTILIKN----------SREILAFNTIC 190
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+ATQ RQ + K+ EKVD ++V+ + I N +H VE
Sbjct: 191 NATQVRQQSAKKL-SEKVDSMIVIGGKNSSNTTKLY-----EICKSN--CKNTIH---VE 239
Query: 325 KENWLP----KGQITIGITSGASTPDKAVEDVLKKV 356
+P K IG+T+GASTPD +++ + K+
Sbjct: 240 NAKEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKM 275
>gi|424834377|ref|ZP_18259088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium sporogenes PA 3679]
gi|365978723|gb|EHN14792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium sporogenes PA 3679]
Length = 638
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L+ ++ P+
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKGKGIE--PINI 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
G D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 60 G--DVDKLNKDDTIIIRSHGVPLQTINYLKDKRLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GSNINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT E +E + V +++K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTT----EKQENWEKVLNILIKK------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ A K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQAAKKL-SEKVDSMVVIGGKNSSNTTKLY-----EICKNN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K +G+T+GASTPD +E+ + K + E+ + E L+
Sbjct: 242 KEIPEHIYKNSNIMGVTAGASTPDWIIEEAVNKMNNNDNIIEVSKNEMLE 291
>gi|332799296|ref|YP_004460795.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Tepidanaerobacter acetatoxydans Re1]
gi|438002432|ref|YP_007272175.1| SSU ribosomal protein S1p [Tepidanaerobacter acetatoxydans Re1]
gi|332697031|gb|AEE91488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Tepidanaerobacter acetatoxydans Re1]
gi|432179226|emb|CCP26199.1| SSU ribosomal protein S1p [Tepidanaerobacter acetatoxydans Re1]
Length = 668
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 66/341 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ +A+ GFC+GV+RA++I ++ +EK + +IHNP V +RL+ + +
Sbjct: 1 MEIMIADYSGFCFGVKRAMEIVENLIRK--KEKAFTLGPLIHNPQVVERLKCSGIIAADL 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + +G+V++ G + L ++ V I+D TCP V +V +
Sbjct: 59 SD-------IKEGNVII-RTHGVEPDLTKQLESRPVNIIDCTCPHVKRVHNLAQDISNRG 110
Query: 145 YTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
Y ++I G ++H E + G +++N +EA K + K
Sbjct: 111 YLTVIIGDHNHPEVEGIKGYCNGDVKVIENAEEA------------------KNFYTTK- 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
KVGI QTT K EEI + + K +E N NT
Sbjct: 152 ---------------KVGIIVQTTQTKENIEEIMSV----LRSKLDIEIFN------NTR 186
Query: 264 CDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 323
C ATQ+RQ+A + VD++LV+ G S +++K + + H E
Sbjct: 187 CKATQQRQEAAADLA-RNVDIMLVI-----GGKNSS--NTKKLAQVCQNVGASVYHIETA 238
Query: 324 E--KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 362
E K++W K +GIT+GASTPD +++V+ K+ E +E
Sbjct: 239 EELKKSWF-KYSDKVGITAGASTPDWIIKEVISKMDEFNKE 278
>gi|15599753|ref|NP_253247.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PAO1]
gi|107099780|ref|ZP_01363698.1| hypothetical protein PaerPA_01000798 [Pseudomonas aeruginosa PACS2]
gi|418584125|ref|ZP_13148190.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa MPAO1/P1]
gi|418590178|ref|ZP_13154091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa MPAO1/P2]
gi|421155977|ref|ZP_15615436.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa ATCC 14886]
gi|421182618|ref|ZP_15640092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa E2]
gi|421519112|ref|ZP_15965784.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PAO579]
gi|13629483|sp|Q9HVM7.1|ISPH_PSEAE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|9950802|gb|AAG07945.1|AE004869_9 LytB protein [Pseudomonas aeruginosa PAO1]
gi|375046254|gb|EHS38819.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa MPAO1/P1]
gi|375050951|gb|EHS43426.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa MPAO1/P2]
gi|404346097|gb|EJZ72448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PAO579]
gi|404519570|gb|EKA30304.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa ATCC 14886]
gi|404541766|gb|EKA51115.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa E2]
Length = 314
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 73/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V L + I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNKFVVDNLRQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPNNVIVIFSAHGVSQAVRKEAEGRGLKVFDATCPLVTKVHMEVVRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+ ++ G H E T G+Y D GG + + + +
Sbjct: 114 HECVLIGHEGHPEVEGT---MGQY-------------DASNGGAIYLVEDEADVAALEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K + + QTT+ +T ++ + + G N IC
Sbjct: 158 KPEALHY-----------VTQTTLSMDDTSKVIDALRAKFPQIQGPRK--------NDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + ++ D++LVV E+AE G P+Y ID + +
Sbjct: 199 YATQNRQDAV-KELADQCDMVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ W G IGIT+GAS P+ V V+ ++ E
Sbjct: 253 ------------QRGWF-DGVRRIGITAGASAPEVLVRGVIAQLRE 285
>gi|114331878|ref|YP_748100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
eutropha C91]
gi|114308892|gb|ABI60135.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
eutropha C91]
Length = 323
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 153/354 (43%), Gaps = 74/354 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV LA GFC GV+RA++I A + I++ +E++HN V + LE+ +
Sbjct: 2 IKVLLANPRGFCAGVDRAIEIVERALTMYGA-PIYVRHEVVHNRFVVEDLEKKGAVFV-- 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ + V +G +++ A G + E + +QI D TCP V+KV V K +
Sbjct: 59 ----ENLEEVPEGSMLIFSAHGVSHEVRRDAAARKLQIFDATCPLVTKVHVEVAKMDREG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G++ T +L +
Sbjct: 115 KEIVMIGHQGHPEVEGTM------------------------GQIEKKKGT--MYLVETA 148
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ VS D D + QTT+ + + + +++ + G + + IC
Sbjct: 149 EDVSGLQVKDED--NLAYVTQTTLSVDDAARVIEALKRRFPKIVGPKK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K+V + DL++VV E+A + + +Y +D ++
Sbjct: 199 YATQNRQDAVKKLV-KLCDLVIVVGSPNSSNSNRLCEVARNENVEAYMVDQAAQL----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
+E+WL Q IGIT+GAS P+ V+ VL+++ +I +++ Q
Sbjct: 253 ------------QESWLANKQ-CIGITAGASAPEILVQQVLERLEQIATKQSNQ 293
>gi|83590176|ref|YP_430185.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moorella
thermoacetica ATCC 39073]
gi|83573090|gb|ABC19642.1| hydroxymethylbutenyl pyrophosphate reductase [Moorella
thermoacetica ATCC 39073]
Length = 736
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 139/341 (40%), Gaps = 86/341 (25%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V +A+ GFC+GV+RAV+ A EA K + +IHN V +L V+ +
Sbjct: 1 MEVIVADYAGFCFGVKRAVEKAREAPK-----PVASLGMLIHNRQVVDQLAREGVRPV-- 53
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
D VN G +++ + G E +V +K ++I+D TCP+V + +K
Sbjct: 54 ----ASLDEVNCGRILIR-SHGTTPETLVRARDKGLEIIDATCPYVKRAQHLAQKMAAEG 108
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y II G +H E +AG +V K+A
Sbjct: 109 YQVIIVGDAAHPEVQGMLGWAGPGAVVVPDKKA--------------------------- 141
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
A + F P + + QTT + EE+ + + + NT+C
Sbjct: 142 -AAALPFHP-----RRAVLAQTTQPESRLEEVAAALRSN----------TDTLVVHNTVC 185
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT +RQ+A ++ + VD+++VV E+ G P+Y ++
Sbjct: 186 QATHQRQEAAVRLARQ-VDVMVVVGGKESANTRHLAELCRATGTPTYHVERA-------- 236
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
GEL + W + +G+T GASTP +E+V+
Sbjct: 237 -------GELCRQ--WFINTR-RVGVTGGASTPAWIIEEVV 267
>gi|333979263|ref|YP_004517208.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333822744|gb|AEG15407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 739
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 85/349 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP- 83
++V+ AE GFC+GV+RA+ +A ++ + ++ +IHNP V ++L +Q I
Sbjct: 1 MQVRRAEKAGFCFGVKRALNLAMITTRER-DGPVYCLGPLIHNPQVMEKLAAAGIQEIAG 59
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE + G +++ + G + +++++VD TCP+V + G
Sbjct: 60 VEEARP-------GGKLIIRSHGVGPGILAAARERDLKVVDATCPFVGRAQKLAHSEAAG 112
Query: 144 DYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G +H E + G+ ++V+ +EA+ + + A L +
Sbjct: 113 GTLVVVVGDKNHPEVQGIVDWTGGRAVVVEGPQEAQKL-----------PAVAHMAVLAQ 161
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ ++ F VD+ + +K G +NT
Sbjct: 162 TTQPLAN-FQAVVDV--------------------------LQQKAG------QLKVYNT 188
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC AT RQ A ++ E VD+++VV + G+P+Y +++ + + P
Sbjct: 189 ICHATGARQQAALELARE-VDVMVVVGGASSANTRKLAALCRQAGVPTYQVETARELDPA 247
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W +G G+T+GASTPD +E+V +++ E+
Sbjct: 248 -----------------WF-RGVKVAGLTAGASTPDWIIEEVERRMKEL 278
>gi|433602647|ref|YP_007035016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Saccharothrix
espanaensis DSM 44229]
gi|407880500|emb|CCH28143.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Saccharothrix
espanaensis DSM 44229]
Length = 314
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 145/347 (41%), Gaps = 88/347 (25%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA+ G+C GV+RAV +A +Q+ +++ EI+HN V + L +
Sbjct: 4 RVLLAKPRGYCAGVDRAVVTVEKALEQY-GAPVYVRKEIVHNKHVVETLSRRGAIFV--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G +VV A G + ++ ++ +D TCP V+KV ++ + DY
Sbjct: 60 ---NETDEVPEGALVVFSAHGVSPMVHQEAADRQLRTIDATCPLVTKVHNEAKRFAREDY 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + + + K
Sbjct: 117 DILLIGHEGHEEVEGTAGEAPEHIQLVDTA-------------------------QDVDK 151
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
V + DP KV +QTT+ V++TM+R V + E F
Sbjct: 152 VVVR--DPS----KVVWLSQTTL----------SVDETMIR---VRQLQERFPDLQEPPS 192
Query: 261 NTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGI-PSYWIDSEKRI 307
+ IC AT RQ A+ M E DL+LV VE+A G SY +D +
Sbjct: 193 DDICYATSNRQTAVKTMAPE-CDLVLVVGSKNSSNSVRLVEVALQAGARASYLVDYANEV 251
Query: 308 GPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
P WL +G T+G+TSGAS PD V ++L+
Sbjct: 252 DPA-----------------WL-EGVTTVGVTSGASVPDILVMELLE 280
>gi|404476231|ref|YP_006707662.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli B2904]
gi|404437720|gb|AFR70914.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli B2904]
Length = 577
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 53/332 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV++ + GFC GV+ AV+ + + E+I++ +IHNP LE+ V+
Sbjct: 1 MKVEIGKFAGFCDGVKYAVEKTFSQASK-SNEEIYVDGHLIHNPQTLDMLEKTGVKT--Y 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + V++ V++ A G + E L++ +IV+ TC +V+K+ V+KH
Sbjct: 58 EDTEDDMSVLDDKTVII-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y I+ G +H E + FA +V K+ +EK
Sbjct: 117 YRVIVIGNPTHPEIIGVCGFAQDVYVV-----------------------YKDEDIEKL- 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+ D K I QTT+ K E K V + + K+ N I NTIC
Sbjct: 153 --------PEDD-KKTLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT++RQ+ + + ++ D++LV+ +E + + +I K ++ + E +E
Sbjct: 196 EATEQRQNEILD-IAKRNDVVLVIGGSESSNTRNLY-----KIASSIKPSFYVEFKEDLE 249
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K + P +GI +GASTPD +ED+ + +
Sbjct: 250 KIDLTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|405982123|ref|ZP_11040447.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
neuii BVS029A5]
gi|404390914|gb|EJZ85980.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
neuii BVS029A5]
Length = 335
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 140/333 (42%), Gaps = 62/333 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
K+ LA G+C GV+RAV A E + I++ EI+HN V + L + +
Sbjct: 6 KILLAAPRGYCAGVDRAVD-AVEKALELYGAPIYVRKEIVHNKYVVETLSKRGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G VV A G + + + +Q +D TCP V+KV + K DY
Sbjct: 62 ---SETDEVPAGARVVFSAHGVSPAVHASAEARQLQTIDATCPLVTKVHRQAVRFAKDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T A +I V ++G + +
Sbjct: 119 DIVLVGHEGHEEVEGTQGEAPDHIQV-----------------IDGPDEIDQLQVR---- 157
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF----- 260
DPD KV +QTT+ ET K VE + E F +
Sbjct: 158 ------DPD----KVVWLSQTTLSVDET-------------KATVEKLREKFPNLIDPPS 194
Query: 261 NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
IC ATQ RQ A+ K + ++ D+++VV A E + G A+++
Sbjct: 195 GDICYATQNRQGAV-KQIGKQADVMIVVGSANSSNSVRLV---EVALEAGAGAAHRIDKA 250
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ +++E W +G T+G+TSGAS PD V DV+
Sbjct: 251 DELQEE-WF-EGATTVGLTSGASVPDILVRDVI 281
>gi|386288497|ref|ZP_10065638.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium BDW918]
gi|385278513|gb|EIF42484.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium BDW918]
Length = 315
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 77/358 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+ + +A GFC GV+RA++I A F I++ +E++HN V + L + +
Sbjct: 1 MPIMMANPRGFCAGVDRAIEIVNRALDVF-GAPIYVRHEVVHNKFVVENLRQRGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V +V+ A G + + +++ D TCP V+KV V
Sbjct: 58 ----DELIEVPDDKIVIFSAHGVSQAVRKEAQTRGLKVFDATCPLVTKVHMEVVHFSGEG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G H E T G+ +G+ +E +
Sbjct: 114 RECVLIGHKGHPEVEGTM------------------------GQYSGAQGGDIYLVEDVE 149
Query: 205 KAVSKGF-DPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKF-GVENVNEHFISFNT 262
+A++ +PD ++ QTT+ +T V + KF +E + +
Sbjct: 150 QALALEVQNPD----RLSFVTQTTLSMDDT----AAVIDALRSKFPNIEGPRK-----DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K + E+VDL+LVV E+AE G +Y IDSE I
Sbjct: 197 ICYATQNRQDAV-KTLAEQVDLVLVVGSPNSSNSNRLRELAERIGCKAYLIDSETDI--- 252
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
+ WL IGIT+GAS P+ V V++++ E+ + ++LA
Sbjct: 253 --------------RSEWLADNP-RIGITAGASAPEVLVHAVVQRLCELGAQAPVELA 295
>gi|422607955|ref|ZP_16679947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. mori str. 301020]
gi|330891589|gb|EGH24250.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. mori str. 301020]
Length = 315
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 75/345 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+ + S+ +E +
Sbjct: 114 RECILIGHAGHPEVEGTM------------------------GQYDASNGGAIYLVEDEE 149
Query: 205 KAVS-KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
S + +PD + QTT+ +T + + K G + I
Sbjct: 150 DVASLQVRNPD----SLAFVTQTTLSMDDTSGVIDALRKRFPAIGGPRK--------DDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 198 CYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ W +G IGIT+GAS P+ V V++++
Sbjct: 253 -------------QQGWF-EGVERIGITAGASAPEVLVRGVIQQL 283
>gi|307543909|ref|YP_003896388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
elongata DSM 2581]
gi|307215933|emb|CBV41203.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
elongata DSM 2581]
Length = 317
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 151/351 (43%), Gaps = 87/351 (24%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V L E + V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNRFVVDSLRERGA--VFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE + D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EELHEVPDDV----IVIFSAHGVSRAVQQEAERRGLRVFDATCPLVTKVHMEVLRYARRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG++ +L + +
Sbjct: 114 QECILIGHQGHPEVEGT---MGRY-------------DTSQGGQI---------YLVEDE 148
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEI-----GKLVEKTMMRKFGVENVNEHF 257
K V++ DP ++ QTT+ +T + K E RK
Sbjct: 149 KDVARLEVQDPS----QLAFVTQTTLSMDDTARVIDALRAKFPEIQGPRK---------- 194
Query: 258 ISFNTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEK 305
+ IC ATQ RQDA+ ++ DL+LVV E++E G P+Y ID+ +
Sbjct: 195 ---DDICYATQNRQDAVRELASGS-DLLLVVGSPNSSNSNRLRELSERVGTPAYLIDNAE 250
Query: 306 RIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+I WL + T+G+T+GAS P+ V+ V++++
Sbjct: 251 QIDAA-----------------WL-ENVGTVGVTAGASAPEVLVQGVIERL 283
>gi|222111945|ref|YP_002554209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidovorax
ebreus TPSY]
gi|221731389|gb|ACM34209.1| hydroxymethylbutenyl pyrophosphate reductase [Acidovorax ebreus
TPSY]
Length = 331
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 142/348 (40%), Gaps = 81/348 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE GFC GV+RA++I A +F I++ +EI+HN V L+ I
Sbjct: 6 EIVLAEPRGFCAGVDRAIEIVERAIAKF-GAPIYVRHEIVHNTYVVNDLKAKGAIFI--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G ++ A G + + I D TCP V+KV V K K Y
Sbjct: 62 ---EDLDEVPPGATLIFSAHGVSRAVQDEARARGFTIFDATCPLVTKVHVEVAKLAKEGY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE--AFLEKF 203
I+ G H E T G+L+ E A + +
Sbjct: 119 EFIMIGHKGHPEVEGTM------------------------GQLDHGIHLVEDVADVARV 154
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ A ++ K+ + QTT+ + EI V +F ++ E I
Sbjct: 155 QPAQTE---------KLAVVTQTTLSVDDAAEITAAVRA----RF--PSIREP--KQQDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K++ +VDL++VV E+A G P+Y IDS +
Sbjct: 198 CYATQNRQDAV-KLLSPQVDLVIVVGSPTSSNSNRLRELAARLGTPAYMIDSVDEL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ W G +G+T+GAS P+ V+ V+ ++ E+
Sbjct: 253 -------------RHEWF-DGISRVGLTAGASAPEVLVQAVITRIKEL 286
>gi|422641857|ref|ZP_16705278.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae Cit 7]
gi|440745947|ref|ZP_20925234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae BRIP39023]
gi|330954242|gb|EGH54502.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae Cit 7]
gi|440371768|gb|ELQ08600.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae BRIP39023]
Length = 315
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + ++ + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAANGGAIYLVEDEEDVASLQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ F QTT+ +T + + K G + IC
Sbjct: 158 NPEALAF-----------VTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+++W G IGIT+GAS P+ V V++++
Sbjct: 253 ------------QQDWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|300869907|ref|YP_003784778.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli 95/1000]
gi|300687606|gb|ADK30277.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli 95/1000]
Length = 577
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 53/332 (15%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV++ + GFC GV+ AV+ + + E+I++ +IHNP LE+ V+
Sbjct: 1 MKVEIGKFAGFCDGVKYAVEKTFSQASK-SNEEIYVDGHLIHNPQTLDMLEKTGVKT--Y 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E+ + V++ V++ A G + E L++ +IV+ TC +V+K+ V+KH
Sbjct: 58 EDTEDDMSVLDDKTVII-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLG 116
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y I+ G +H E + FA +V K+ +EK
Sbjct: 117 YRVIVIGNPTHPEIIGVCGFAQDVYVV-----------------------YKDEDIEKL- 152
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
P+ D K I QTT+ K E K V + + K+ N I NTIC
Sbjct: 153 --------PEDD-KKTLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTIC 195
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
+AT++RQ+ + + ++ D++LV+ +E + + +I K ++ + E +E
Sbjct: 196 EATEQRQNEILD-IAKRNDVVLVIGGSESSNTRNLY-----KIASSIKPSFYVEFKEDLE 249
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
K + P +GI +GASTPD +ED+ + +
Sbjct: 250 KIDLTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|120612414|ref|YP_972092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidovorax
citrulli AAC00-1]
gi|120590878|gb|ABM34318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidovorax
citrulli AAC00-1]
Length = 332
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 139/343 (40%), Gaps = 77/343 (22%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE GFC GV+RA++I A ++F I++ +EI+HN V L+ A I +E
Sbjct: 7 EIVLAEPRGFCAGVDRAIEIVERALQKF-GAPIYVRHEIVHNTYVVNDLK--AKGAIFIE 63
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ V G +V A G + + I D TCP V+KV V K K Y
Sbjct: 64 D----LADVPPGATLVFSAHGVSKAVQAEAEARGFSIFDATCPLVTKVHVEVAKLAKEGY 119
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
I+ G H E T G+L+ E + +
Sbjct: 120 EFIMIGHKGHPEVEGTM------------------------GQLDHGIHLVEDVEDVARV 155
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
S+ K+ + QTT+ + EI V +F V E IC
Sbjct: 156 QPSQ-------TAKLAVVTQTTLSVDDAAEITAAVRA----RF--PQVREP--KQQDICY 200
Query: 266 ATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNKI 313
ATQ RQDA+ K++ +VDL++VV E+A G PSY +DS + P
Sbjct: 201 ATQNRQDAV-KVLSGQVDLVIVVGSPTSSNSNRLRELAVRLGTPSYMVDSADELRP---- 255
Query: 314 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
W G +G+T+GAS P+ V V++++
Sbjct: 256 -------------EWF-DGAARVGLTAGASAPEVLVRQVIERI 284
>gi|116052700|ref|YP_793016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893652|ref|YP_002442521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa LESB58]
gi|254238695|ref|ZP_04932018.1| LytB protein [Pseudomonas aeruginosa C3719]
gi|254244545|ref|ZP_04937867.1| LytB protein [Pseudomonas aeruginosa 2192]
gi|296391371|ref|ZP_06880846.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PAb1]
gi|313107202|ref|ZP_07793401.1| LytB protein [Pseudomonas aeruginosa 39016]
gi|386060710|ref|YP_005977232.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa M18]
gi|386063995|ref|YP_005979299.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa NCGM2.S1]
gi|392986221|ref|YP_006484808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa DK2]
gi|416858860|ref|ZP_11913575.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa 138244]
gi|416877383|ref|ZP_11919783.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa 152504]
gi|419752103|ref|ZP_14278512.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PADK2_CF510]
gi|420138333|ref|ZP_14646262.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa CIG1]
gi|421162924|ref|ZP_15621716.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa ATCC 25324]
gi|421176812|ref|ZP_15634471.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa CI27]
gi|424944676|ref|ZP_18360439.1| LytB protein [Pseudomonas aeruginosa NCMG1179]
gi|122257290|sp|Q02GC0.1|ISPH_PSEAB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226722812|sp|B7V0A0.1|ISPH_PSEA8 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|32423755|gb|AAP81279.1| drug tolerance protein [Pseudomonas aeruginosa PA14]
gi|115587921|gb|ABJ13936.1| penicillin tolerance protein, LytB [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170626|gb|EAZ56137.1| LytB protein [Pseudomonas aeruginosa C3719]
gi|126197923|gb|EAZ61986.1| LytB protein [Pseudomonas aeruginosa 2192]
gi|218773880|emb|CAW29694.1| LytB protein [Pseudomonas aeruginosa LESB58]
gi|310879903|gb|EFQ38497.1| LytB protein [Pseudomonas aeruginosa 39016]
gi|334839010|gb|EGM17709.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa 138244]
gi|334839630|gb|EGM18308.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa 152504]
gi|346061122|dbj|GAA21005.1| LytB protein [Pseudomonas aeruginosa NCMG1179]
gi|347307016|gb|AEO77130.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa M18]
gi|348032554|dbj|BAK87914.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa NCGM2.S1]
gi|384401680|gb|EIE48034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PADK2_CF510]
gi|392321726|gb|AFM67106.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa DK2]
gi|403248913|gb|EJY62440.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa CIG1]
gi|404530449|gb|EKA40449.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa CI27]
gi|404532630|gb|EKA42506.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa ATCC 25324]
gi|453046105|gb|EME93822.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PA21_ST175]
Length = 314
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 73/346 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A F I++ +E++HN V L + I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALDVF-GPPIYVRHEVVHNKFVVDNLRQRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDNVIVIFSAHGVSQAVRKEAEGRGLKVFDATCPLVTKVHMEVVRYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+ ++ G H E T G+Y D GG + + + +
Sbjct: 114 HECVLIGHEGHPEVEGT---MGQY-------------DASNGGAIYLVEDEADVAALEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K + + QTT+ +T ++ + + G N IC
Sbjct: 158 KPEALHY-----------VTQTTLSMDDTSKVIDALRAKFPQIQGPRK--------NDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ K + ++ D++LVV E+AE G P+Y ID + +
Sbjct: 199 YATQNRQDAV-KELADQCDMVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
+ W G IGIT+GAS P+ V V+ ++ E
Sbjct: 253 ------------QRGWF-DGVRRIGITAGASAPEVLVRGVIAQLRE 285
>gi|426411562|ref|YP_007031661.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
UW4]
gi|426269779|gb|AFY21856.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
UW4]
Length = 315
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 93/354 (26%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVAT-----ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF 199
I+ G H E T AS G +V++ K+ L ++ K AF
Sbjct: 114 RECILIGHAGHPEVEGTMGQYDASNGGAIYLVEDEKDV---------AALQVNNPEKLAF 164
Query: 200 LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
+ QTT+ +T + ++ + F +
Sbjct: 165 V-----------------------TQTTLSMDDTSRV-------------IDALRSRFPA 188
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID
Sbjct: 189 IGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLID 247
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ + +++W G IGIT+GAS P+ V V++++
Sbjct: 248 GAEDL-----------------QKSWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|170723717|ref|YP_001751405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida W619]
gi|229486013|sp|B1JF80.1|ISPH_PSEPW RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|169761720|gb|ACA75036.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas putida
W619]
Length = 315
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 147/346 (42%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHEGHPEVEGT---MGQY-------------DASNGGAI---------YLVEDE 148
Query: 205 KAVSK--GFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V++ DPD + QTT+ +T + + +T G ++
Sbjct: 149 EDVARLQVRDPD----NLAFVTQTTLSMDDTSRVIDAL-RTRFPNIGGPRKDD------- 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ E D++LVV E+AE G P+Y ID + +
Sbjct: 197 ICYATQNRQDAVKQLAGE-CDVVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDM--- 252
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ W + IGIT+GAS P+ V V+ ++
Sbjct: 253 --------------QRGWFDQAA-RIGITAGASAPEVLVRGVIDQL 283
>gi|255326923|ref|ZP_05367999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
mucilaginosa ATCC 25296]
gi|255296140|gb|EET75481.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
mucilaginosa ATCC 25296]
Length = 361
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 149/337 (44%), Gaps = 64/337 (18%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
G KV LA G+C GV+RAV IA E + +++ +I+HN V + LE+ I
Sbjct: 31 GEKKVLLATPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKQIVHNRHVVETLEKQGA--I 87
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
V+E D V +G V V A G + + ++++ +D TCP V+KV + K
Sbjct: 88 FVDE----VDEVPEGSVTVFSAHGVSPAVVSAAGDRSLNTIDATCPLVNKVHREAVRFAK 143
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLE 201
DY ++ G HEE TA A ++I IV + E + V
Sbjct: 144 QDYDILLIGHTGHEEVEGTAGEAPEHIQIVNSPDEVDQVTVR------------------ 185
Query: 202 KFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF- 260
+P+ KV +QTT+ ET E V + E F S
Sbjct: 186 ----------NPE----KVVWISQTTLSVDETLET-------------VARLRERFPSLQ 218
Query: 261 ----NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYK 316
+ IC AT RQ A+ K + + DL++VV A S + E + G K A +
Sbjct: 219 DPPSDDICYATSNRQGAI-KEIAPRADLVIVVGSANSSN--SVRL-KEVALEYGAKRAER 274
Query: 317 LMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
+ V+ E+W +G T+G+TSGAS P+ V++VL
Sbjct: 275 VDFAHQVD-ESWF-EGVATVGLTSGASVPEVLVQEVL 309
>gi|374579676|ref|ZP_09652770.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfosporosinus youngiae DSM 17734]
gi|374415758|gb|EHQ88193.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfosporosinus youngiae DSM 17734]
Length = 659
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 68/343 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KVK A GFC+GV+RA+ +A + + +IHN V KRL E +Q +
Sbjct: 1 MKVKRAAKAGFCFGVKRALDMAERTAETSHAVSL---GPLIHNQQVVKRLAERGIQVV-- 55
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ D + +++ + G A K +Q+VD TCP+V K + K
Sbjct: 56 ----EDLDELTSRQALIIRSHGVAPLVYQKAEIKGIQVVDATCPFVQKAQRLAAESSKMG 111
Query: 145 YTSIIHGKYSHEETVATASFAGKYII-VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKF 203
I+ G H E +AG+ I ++ ++EA+ + Y
Sbjct: 112 QQVIVMGDKLHPEVQGILGWAGEEAIPIQTVEEAKELPFY-------------------- 151
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
P + + QTT L E +VE+ +++ E I NTI
Sbjct: 152 ---------P-----HLAVLAQTTQL---AENFAGIVEE-------LKSHTEDLIVHNTI 187
Query: 264 CDATQERQDAMYKMVEEKVDLILVV---EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG 320
C+AT ERQ A ++ E VD+++VV A R + S + K Y +
Sbjct: 188 CNATAERQKAARELA-ETVDIMVVVGGRNSANTRKLASICAERTK--------TYLIETA 238
Query: 321 ELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 363
E +E + W + +I G+T+GASTPD +E+V KK+ E+ +E
Sbjct: 239 EELE-DVWFKEAKIA-GLTAGASTPDWIIEEVYKKMTEMNEQE 279
>gi|357419715|ref|YP_004932707.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermovirga
lienii DSM 17291]
gi|355397181|gb|AER66610.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermovirga
lienii DSM 17291]
Length = 289
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 140/340 (41%), Gaps = 80/340 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA+ GFC+GVERAV + EA K K++ IHNP RLE + + V+
Sbjct: 5 KVILADPIGFCFGVERAVNLLEEALKV--HGKVYCIGSPIHNPQETARLENKGL--VVVD 60
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
G++ + G V + A G + L N+ ++D TCP+V K Y
Sbjct: 61 SGEE----IPNGSAVFVRAHGLPEGDRRELLNRGHSLIDGTCPFVFKAQKKASFLISQGY 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
+I G H E A I +++ E V +L G E +
Sbjct: 117 RVLILGDKDHPEVKA---------ITQHLGERSSV---VLPG-------------EPLPE 151
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
VS G KVGI +QTT E++ LV+ + + +NTIC
Sbjct: 152 EVSGG--------KVGIISQTTQ---RLEDLANLVQLVVPKA-------SELRVYNTICG 193
Query: 266 ATQERQDAMYKMVEEKVDLILV-----------VEIAEDRGIPSYWIDSEKRIGPGNKIA 314
AT+ RQ A+ ++ ++++ EIA +R + WI+ +
Sbjct: 194 ATEARQKAVAELAGITDGVVVIGGKNSANTRKLFEIALERNNQAIWIEEASEL------- 246
Query: 315 YKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 354
WL +G+ IG+ +GASTPD ++D LK
Sbjct: 247 ----------DWRWL-EGKSIIGVAAGASTPDWLIDDFLK 275
>gi|317152635|ref|YP_004120683.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
aespoeensis Aspo-2]
gi|316942886|gb|ADU61937.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
aespoeensis Aspo-2]
Length = 282
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 140/344 (40%), Gaps = 77/344 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
++V LAE+ GFC GV+ A++ + I I IIHNP V R E Q + +
Sbjct: 1 MEVILAETAGFCMGVDLALRRLDKLVAAADGRPIHILGPIIHNPQVLARYAE---QGVII 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E Q V G V+ A G E L ++V I D TCP V K + +H G
Sbjct: 58 AETPDQ---VPDGAYAVIRAHGITREVERALRARSVIIKDATCPRVKKAQLLIARHTAGG 114
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
+++G+ H E S+AG +I G E +
Sbjct: 115 EVLLLYGERDHPEVRGLVSYAGNG-------------HHIFGSE---------------E 146
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+ P V +A QTT + E + K +E + + +TIC
Sbjct: 147 ELAGIPLSPGTPYV---LAAQTTQDRAVFEAMAKRLEG---------DPALDILVLHTIC 194
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
DAT+ RQ ++ ++ V+ ++VV ++A +RG P +++
Sbjct: 195 DATRLRQSETSRLADQ-VEFMVVVGGLNSGNTRRLAQVATERGTPCVHVET--------- 244
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
A +L GEL + +G+T+GASTP +++VL+ +
Sbjct: 245 -ADELDLGEL--------RRHARVGVTAGASTPRVLIDEVLRTL 279
>gi|167585721|ref|ZP_02378109.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ubonensis Bu]
Length = 326
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 77/349 (22%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
+ ++ LA+ GFC GV+RA++I A + I++ +EI+HN V + L++ I
Sbjct: 14 ADAEILLAQPRGFCAGVDRAIEIVERAIAMY-GAPIYVRHEIVHNKYVVEDLKKKGA--I 70
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
VEE + V G+ V+ A G + + +++ D TCP V+KV V K ++
Sbjct: 71 FVEE----LEEVPSGNTVIFSAHGVSKAVRDEAGVRGLRVYDATCPLVTKVHVEVAKMRQ 126
Query: 143 GDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
++ G H E T + + M E V D ++K
Sbjct: 127 DGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLVESVED-----------------VQK 164
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ A DP+ ++ + QTT+ + EI K + E
Sbjct: 165 LELA-----DPE----RIALVTQTTLSVDDAAEI------IAALKAKYPKIREP--KKQD 207
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ K + + D+++VV E+AE RG+ +Y +D+ +I P
Sbjct: 208 ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPDQIDPA 266
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
W+ G+ IG+T+GAS P+ + V+ ++ E+
Sbjct: 267 -----------------WV-AGKRRIGVTAGASAPEVLAQAVIARLREL 297
>gi|451936507|ref|YP_007460361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777430|gb|AGF48405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 316
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 146/350 (41%), Gaps = 81/350 (23%)
Query: 18 FEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEM 77
F+ + + LA GFC GV+RA+ I +A + E I++ +EI+HN V +
Sbjct: 3 FKVSIHKKDITLAAPRGFCAGVKRAIAIVEKAISLY-ESIIYVNHEIVHNKHVIDYFKSK 61
Query: 78 AVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV 137
V + V +G +++ A G + + + K + I+D TCP V+KV V
Sbjct: 62 GVVFV------NNIIDVPEGSIIIFSAHGVSKDVIAIAKKKKLLIIDATCPLVTKVHLEV 115
Query: 138 EKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSST 195
K ++ + II G H E T F+G + +V+N+++ Y+ D I EL
Sbjct: 116 LKMRRENREVIIIGHKGHPEIDGTLGQDFSGIH-VVENVRDV-YLLD-INDNEL------ 166
Query: 196 KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNE 255
+G QTT+ + I + ++ + G +
Sbjct: 167 ------------------------IGYVTQTTLSLDDVVCIEEALKNRFPKIVGPKK--- 199
Query: 256 HFISFNTICDATQERQDAMYKMVEEKVDLILV------------VEIAEDRGIPSYWIDS 303
+ IC ATQ RQ+A+ K + + DLILV VE+A + SY IDS
Sbjct: 200 -----SDICYATQNRQNAL-KYIVKDCDLILVVGSINSSNSNRLVELARQSSVESYLIDS 253
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVL 353
I P WL + IGITSGAS P+ V+ V+
Sbjct: 254 FDSINPI-----------------WLIDKK-HIGITSGASAPEVIVDQVV 285
>gi|339485543|ref|YP_004700071.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida S16]
gi|431800667|ref|YP_007227570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida HB3267]
gi|338836386|gb|AEJ11191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida S16]
gi|430791432|gb|AGA71627.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida HB3267]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 142/344 (41%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + ++ + K
Sbjct: 114 RECILIGHEGHPEVEGT---MGQY-------------DASNGGAIYLVEDEEDVANLQVK 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DPD + QTT+ +T + + G + IC
Sbjct: 158 -------DPD----HLAFVTQTTLSMDDTSRVIDALRARFPNIGGPRK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE G P+Y ID
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMGTPAYLIDG--------- 248
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
A L G W + +GIT+GAS P+ V V++++
Sbjct: 249 -AEDLQRG-------WFDQ-TARVGITAGASAPEVLVRGVIEQL 283
>gi|300741966|ref|ZP_07071987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
dentocariosa M567]
gi|300381151|gb|EFJ77713.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rothia
dentocariosa M567]
Length = 361
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 148/339 (43%), Gaps = 64/339 (18%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
KV LA G+C GV+RAV IA E + +++ +I+HN V + LE+ I V+
Sbjct: 34 KVLLATPRGYCAGVDRAV-IAVEKALEHYGAPVYVRKQIVHNRHVVETLEQQGA--IFVD 90
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
E D V +G V V A G + + + + +D TCP V+KV + K DY
Sbjct: 91 E----VDEVPEGSVTVFSAHGVSPAVVSAAGERQLNTIDATCPLVNKVHREAVRFAKQDY 146
Query: 146 TSIIHGKYSHEETVATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
++ G HEE TA A ++I IV + E + V
Sbjct: 147 DILLIGHTGHEEVEGTAGEAPEHIQIVNSPDEVDSVTVR--------------------- 185
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF---- 260
DP+ KV +QTT+ ET E V + E F S
Sbjct: 186 -------DPE----KVVWISQTTLSVDETLET-------------VARLRERFPSLQDPP 221
Query: 261 -NTICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 319
+ IC AT RQ A+ K + + DL++VV A S + E + G K A ++
Sbjct: 222 SDDICYATSNRQGAI-KEIAPQSDLVIVVGSANSSN--SVRL-KEVALEYGAKRAERVDF 277
Query: 320 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
V+ E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 278 AHQVD-ESWF-EGVATVGLTSGASVPEVLVQEVLALLAE 314
>gi|28868037|ref|NP_790656.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213971060|ref|ZP_03399180.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas syringae
pv. tomato T1]
gi|301384217|ref|ZP_07232635.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tomato Max13]
gi|302060859|ref|ZP_07252400.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tomato K40]
gi|302132876|ref|ZP_07258866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422659756|ref|ZP_16722178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|38257980|sp|Q889E1.1|ISPH_PSESM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|28851273|gb|AAO54351.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213924168|gb|EEB57743.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas syringae
pv. tomato T1]
gi|331018371|gb|EGH98427.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 143/344 (41%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRSRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE ++ D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EELEQVPDDV----IVIFSAHGVSQAVRTEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D + GG + + + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DAVNGGAIYLVEDEADVASLEVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
S F QTT+ +T + + K G + IC
Sbjct: 158 NPESLAF-----------VTQTTLSMDDTSRVIDALRKRFPAIGGPRK--------DDIC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMATPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
++ W G IGIT+GAS P+ V V++++
Sbjct: 253 ------------QKGWF-DGVERIGITAGASAPEVLVRGVIQQL 283
>gi|365846559|ref|ZP_09387061.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Yokenella
regensburgei ATCC 43003]
gi|364573691|gb|EHM51178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Yokenella
regensburgei ATCC 43003]
Length = 316
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 74/355 (20%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A + + I++ +E++HN V L E I
Sbjct: 1 MQILLANPRGFCAGVDRAISIVENALEIY-GAPIYVRHEVVHNRYVVDSLRERGAIFI-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+Q V G +++ A G + ++++ + D TCP V+KV V + +
Sbjct: 58 ----EQISEVPDGTILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
SI+ G H E T G+Y N Y+ + S + + K K
Sbjct: 114 EESILIGHAGHPEVEGT---MGQY---SNPAGGMYLVE-----------SPDDVWKLKVK 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
K+ QTT+ +T +I + + + G + IC
Sbjct: 157 NE-----------EKLSFMTQTTLSVDDTSDIIDALRQRFPKIVGPRK--------DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
AT RQ+A+ + + E+ D++LVV E+A+ G +Y ID I
Sbjct: 198 YATTNRQEAV-RALAEQADVVLVVGSKNSSNSNRLAELAQRMGKAAYLIDDATDI----- 251
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 367
+E W+ K +G+T+GAS PD V++V++++ E+ EAL L
Sbjct: 252 ------------QERWV-KDAACVGVTAGASAPDILVQNVIRRLQELGGGEALPL 293
>gi|404402795|ref|ZP_10994379.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fuscovaginae UPB0736]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 73/344 (21%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L A I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLR--ARGAIFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V ++ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRSEAAGRGLKVFDATCPLVTKVHIEVARYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + K+ + +
Sbjct: 114 RECILIGHAGHPEVEGT---MGQY-------------DASNGGAIYLVEDEKDVAALQVR 157
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
+P+ K+ QTT+ +T + + +T G ++ IC
Sbjct: 158 -------NPE----KLAFVTQTTLSMDDTSRVIDAL-RTRFPAIGGPRKDD-------IC 198
Query: 265 DATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGNK 312
ATQ RQDA+ ++ +E D++LVV E+AE P+Y ID + +
Sbjct: 199 YATQNRQDAVKQLADE-CDVVLVVGSPNSSNSNRLRELAERMSTPAYLIDGAEDM----- 252
Query: 313 IAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
+ +W +G IGIT+GAS P+ V V++++
Sbjct: 253 ------------QRSWF-EGVERIGITAGASAPEVLVRGVIQQL 283
>gi|26987343|ref|NP_742768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida KT2440]
gi|167031668|ref|YP_001666899.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida GB-1]
gi|38258015|sp|Q88Q89.1|ISPH_PSEPK RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|189045816|sp|B0KM87.1|ISPH_PSEPG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|24981994|gb|AAN66232.1|AE016251_8 hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas putida
KT2440]
gi|166858156|gb|ABY96563.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas putida
GB-1]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 145/346 (41%), Gaps = 77/346 (22%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++KLA GFC GV+RA++I A + F I++ +E++HN V + L I V
Sbjct: 1 MQIKLANPRGFCAGVDRAIEIVNRALEVF-GPPIYVRHEVVHNKFVVEDLRNRGA--IFV 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
EE D V +V+ A G + + +++ D TCP V+KV V K+ +
Sbjct: 58 EE----LDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G H E T G+Y D GG + +L + +
Sbjct: 114 RECILIGHEGHPEVEGT---MGQY-------------DASNGGAI---------YLVEDE 148
Query: 205 KAVS--KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
+ V+ + DPD + QTT+ +T + + G +
Sbjct: 149 EDVANLQVRDPD----HLAFVTQTTLSMDDTSRVIDALRARFPNIGGPRK--------DD 196
Query: 263 ICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPG 310
IC ATQ RQDA+ ++ E D++LVV E+AE G P+Y ID
Sbjct: 197 ICYATQNRQDAVKQLAGES-DVVLVVGSPNSSNSNRLRELAERMGTPAYLIDG------- 248
Query: 311 NKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 356
A L G W + IGIT+GAS P+ V V++++
Sbjct: 249 ---AEDLQRG-------WFDQAA-RIGITAGASAPEVLVRGVIEQL 283
>gi|409404959|ref|ZP_11253432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Herbaspirillum
sp. GW103]
gi|386435726|gb|EIJ48550.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Herbaspirillum
sp. GW103]
Length = 322
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 91/356 (25%)
Query: 23 GNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI 82
+ ++ LA+ GFC GV+RA++I A QF I++ +EI+HN V L I
Sbjct: 6 ADAEILLAQPRGFCAGVDRAIEIVERALAQF-GAPIYVRHEIVHNAYVVNDLRAKGAVFI 64
Query: 83 PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142
++ V G+ V+ A G + + + + + D TCP V+KV V K ++
Sbjct: 65 ------EELADVPAGNTVIFSAHGVSKAILAEAAERGLTVFDATCPLVTKVHMEVAKMRR 118
Query: 143 GDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL 200
I+ G H E T + AG +++ E V D +
Sbjct: 119 EGREIIMIGHAGHPEVEGTMGQTEAGMHLV-------ETVED-----------------V 154
Query: 201 EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF 260
++ + A DP++ + +QTT+ +T +I + + F +
Sbjct: 155 QRLQVA-----DPEL----LAYVSQTTLSVDDTADI-------------IAALRARFPAI 192
Query: 261 -----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDS 303
IC AT RQ+A+ K + +V++++VV E+AE +G+P++ +D+
Sbjct: 193 AEPKKGDICYATTNRQEAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKKGVPAFMVDN 251
Query: 304 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
I P W+ G+ IG+T+GAS P+ V+ V+ ++ EI
Sbjct: 252 AALIDP-----------------QWV-VGRQRIGVTAGASAPEVLVQAVIDRIKEI 289
>gi|298528413|ref|ZP_07015817.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512065|gb|EFI35967.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 297
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 57/338 (16%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
+ +V LAES GFC GV A+ +A + ++I+ IIHNP V + V+ I
Sbjct: 2 STQVLLAESAGFCMGVSLALGKLDKALENQTSQRIFTYGPIIHNPQVLEYYHGKGVKII- 60
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
+D GD+V++ A G ++ L KN+ I+D TCP V K + K+
Sbjct: 61 -----DNWDEPRPGDMVLIRAHGVPLQVEEKLREKNIDILDATCPKVKKAQLLIYKNSAV 115
Query: 144 DYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEK 202
+I+G+ H E S+A + + +NM+E
Sbjct: 116 SDRLLIYGELDHPEVKGLLSYAQCEAFLFENMQE-------------------------- 149
Query: 203 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT 262
FKK D + + +QTT + E I ++ + I+ +T
Sbjct: 150 FKKIALAPKD------RYCLVSQTTQDRQEFLSIASELKHSQ---------GNEIITLDT 194
Query: 263 ICDATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 322
ICDAT++RQ+ K+ + V+ + VV + G ++ + K + +H E
Sbjct: 195 ICDATKDRQNETIKIAGQ-VECMFVVG-GRNSG------NTRRLYQVARKYCPRCLHIET 246
Query: 323 VEK-ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
E+ + + KG +G+T+GASTP+ ++ + + + I
Sbjct: 247 KEEIDPEMVKGCSKVGLTAGASTPNSTIQSIYQYLHRI 284
>gi|28572805|ref|NP_789585.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Tropheryma
whipplei TW08/27]
gi|50401001|sp|Q83NB2.1|ISPH_TROW8 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|28410938|emb|CAD67323.1| IspH protein [Tropheryma whipplei TW08/27]
Length = 313
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 142/329 (43%), Gaps = 52/329 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV IA E + +++ +I+HN V LE+ +
Sbjct: 4 RVLLASPRGYCAGVDRAV-IAVEKALERHGPPVYVRKQIVHNVHVVGSLEKKGAIFV--- 59
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
Q D + G V + A G + + + N + +Q++D TCP V+KV V + K Y
Sbjct: 60 ---DQVDQIPPGAVTIFSAHGVSPAVVHSANERGLQVIDATCPLVTKVHREVIRFSKAGY 116
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ A ++V N + D
Sbjct: 117 FILLIGHSGHEEVEGTSGHAPDRVLVVNSPDEADTIDV---------------------- 154
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
P D K+ +QTT+ ET E V++ +R +++ + IC
Sbjct: 155 -------PHTD--KLVWLSQTTLSVDETLET---VKRLRLRFPHIQDPPS-----DDICY 197
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ K+ DL++VV A S + E + G K A +L + + E
Sbjct: 198 ATQNRQAAVKKIAPLS-DLVIVVGSANSSN--SVRL-VEVALENGAKAAVRLDYAD--EL 251
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ L +G+TSGAS P+ V D+L+
Sbjct: 252 DPALLDKVDVVGVTSGASVPEILVRDLLE 280
>gi|404214240|ref|YP_006668434.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia sp.
KTR9]
gi|403645039|gb|AFR48279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia sp.
KTR9]
Length = 317
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 52/333 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LAE G+C GV+RAV+ A + +++ EI+HN V + L E +
Sbjct: 6 RVLLAEPRGYCAGVDRAVETVERALDKH-GAPVYVRKEIVHNRHVVETLAERGAIFV--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V +G VV A G + T +N++ +D TCP V+KV ++ + DY
Sbjct: 62 ---GETDEVPEGATVVFSAHGVSPLVHQTAAERNLRTIDATCPLVTKVHQEAKRFARDDY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE TA A ++I + ++G S + + K
Sbjct: 119 DILLIGHEGHEEVEGTAGEAPQHIQL-----------------VDGPDSVESVTVRDESK 161
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
V +QTT+ ET E + + KF + N + IC
Sbjct: 162 LV--------------WLSQTTLSVDETME----TVRRLREKFPLLNDP----PSDDICY 199
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ M E DL++VV S + E + G + + + + ++
Sbjct: 200 ATQNRQVAVKAMAPE-CDLVIVV--GSQNSSNSVRL-VEVALQAGARAGHLVDYAREID- 254
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358
E+WL G T+G+TSGAS P+ V VL + E
Sbjct: 255 ESWL-DGVTTVGVTSGASVPEVLVRGVLDYLAE 286
>gi|28493609|ref|NP_787770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Tropheryma
whipplei str. Twist]
gi|50400999|sp|Q83MR9.1|ISPH_TROWT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|28476651|gb|AAO44739.1| IspH protein 1 [Tropheryma whipplei str. Twist]
Length = 322
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 142/329 (43%), Gaps = 52/329 (15%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
+V LA G+C GV+RAV IA E + +++ +I+HN V LE+ +
Sbjct: 13 RVLLASPRGYCAGVDRAV-IAVEKALERHGPPVYVRKQIVHNVHVVGSLEKRGAIFV--- 68
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
Q D + G V + A G + + + N + +Q++D TCP V+KV V + K Y
Sbjct: 69 ---DQVDQIPPGAVTIFSAHGVSPAVVHSANERGLQVIDATCPLVTKVHREVIRFSKAGY 125
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 205
++ G HEE T+ A +++ N + D
Sbjct: 126 FILLIGHSGHEEVEGTSGHAPDRVLIVNSPDEADTIDV---------------------- 163
Query: 206 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 265
P D K+ +QTT+ ET E V++ +R +++ + IC
Sbjct: 164 -------PHTD--KLVWLSQTTLSVDETLET---VKRLRLRFPHIQDPPS-----DDICY 206
Query: 266 ATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 325
ATQ RQ A+ K+ DL++VV A S + E + G K A +L + + E
Sbjct: 207 ATQNRQAAVKKIAPLS-DLVIVVGSANSSN--SVRL-VEVALENGAKAAVRLDYAD--EL 260
Query: 326 ENWLPKGQITIGITSGASTPDKAVEDVLK 354
+ L +G+TSGAS P+ V D+L+
Sbjct: 261 DPALLDKVDVVGVTSGASVPEILVRDLLE 289
>gi|410630916|ref|ZP_11341601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola
arctica BSs20135]
gi|410149614|dbj|GAC18468.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola
arctica BSs20135]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 50/344 (14%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+++ LA GFC GV+RA+ I A + FP I++ +E++HN V L+E +
Sbjct: 1 MQIHLANPRGFCAGVDRAIIIVERALEMFPA-PIFVRHEVVHNKFVVDGLKERGAVFV-- 57
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
+ V +V+ A G + +++ +++ D TCP V+KV V + K
Sbjct: 58 ----DELSEVPDDSIVIFSAHGVSQAVRTEADSRGLKVFDATCPLVTKVHMEVMRASKKG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
I+ G + H E T G+Y N K Y+ + + E S + K
Sbjct: 114 TECILIGHHGHPEVEGT---MGQY---DNAKGGIYLVESV---EDVASLAVK-------- 156
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
DP ++ +QTT+ +T ++ ++ ++ +E + + IC
Sbjct: 157 -------DPS----QLYYCSQTTLSVDDTADV---IDALRLQFPAIEGPRK-----DDIC 197
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 324
ATQ RQD++ ++ + DL+LVV A++ + + ++IG AY + ++
Sbjct: 198 YATQNRQDSVRELSSD-CDLLLVVG-AQNSSNSNRLRELAEKIG---ATAYLIADANCIQ 252
Query: 325 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 368
++WL K IG+T+GAS P+ V+ V+ ++ E A++ A
Sbjct: 253 -QSWL-KNAKNIGVTAGASAPEILVQGVVNRLIEWGASAAIERA 294
>gi|325846468|ref|ZP_08169383.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325481226|gb|EGC84267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 692
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 68/347 (19%)
Query: 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV 84
+KV +A++ GFC GV R+V +A +A ++ K + ++HNPT + LE+ V I
Sbjct: 1 MKVIVAKNSGFCNGVRRSVDLANKASEKNI--KTYTLGPLVHNPTQVQMLEDKGVGVIDE 58
Query: 85 EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGD 144
E K D +V+ + G E + ++D TCP + ++ +++ +
Sbjct: 59 NEVIKLND-----SQIVIRSHGVREELKDNIRKNQNDVIDATCPVLLNIYKKIKEKENQG 113
Query: 145 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK 204
Y +I G +H E A AS+ II+K+ EA+ +
Sbjct: 114 YKVVIIGDKNHPEIKAMASYINDGIIIKDETEAKNIT----------------------- 150
Query: 205 KAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTIC 264
++ K+ + +QTT E I +EKT N+ + NTIC
Sbjct: 151 -----------NMSKLYVVSQTTNRIDFFENIAHELEKT----------NDDVVIENTIC 189
Query: 265 DATQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELV 323
+AT+ RQ+A K + ++VD ++V+ + +IA K + +
Sbjct: 190 NATRLRQEAC-KSLSKEVDCMVVIGGFNSSNTNKLY-----------QIAQKYCKNVQRI 237
Query: 324 EKENWLPKGQIT----IGITSGASTPDKAVEDVLKKVFEIKREEALQ 366
E LP +++ IG+ +GASTPDK +E+V+ ++ ++ EE +
Sbjct: 238 ETVIDLPLQKLSNFNIIGVIAGASTPDKVIEEVVNRMDDLTNEELMN 284
>gi|121595742|ref|YP_987638.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidovorax sp.
JS42]
gi|120607822|gb|ABM43562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidovorax sp.
JS42]
Length = 331
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 142/348 (40%), Gaps = 81/348 (23%)
Query: 26 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE 85
++ LAE GFC GV+RA++I A +F I++ +EI+HN V L+ I
Sbjct: 6 EIVLAEPRGFCAGVDRAIEIVERAIAKF-GAPIYVRHEIVHNTYVVNDLKAKGAIFI--- 61
Query: 86 EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDY 145
+ D V G ++ A G + + I D TCP V+KV V K K Y
Sbjct: 62 ---EDLDEVPPGATLIFSAHGVSRAVQDEARARGFTIFDATCPLVTKVHVEVAKLAKEGY 118
Query: 146 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE--AFLEKF 203
I+ G H E T G+L+ E A + +
Sbjct: 119 EFIMIGHKGHPEVEGTM------------------------GQLDHGIHLVEDVADVARV 154
Query: 204 KKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTI 263
+ A ++ K+ + QTT+ + EI V +F ++ E I
Sbjct: 155 QPAQTE---------KLAVVTQTTLSVDDAAEITAAVRA----RF--PSIREP--KQQDI 197
Query: 264 CDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWIDSEKRIGPGN 311
C ATQ RQDA+ K++ +VDL++VV E+A G P+Y IDS +
Sbjct: 198 CYATQNRQDAV-KLLSPQVDLVVVVGSPTSSNSNRLRELAARLGTPAYMIDSVDEL---- 252
Query: 312 KIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ W G +G+T+GAS P+ V+ V+ ++ E+
Sbjct: 253 -------------RHEWF-DGISRVGLTAGASAPEVLVQAVITRIKEL 286
>gi|187779599|ref|ZP_02996072.1| hypothetical protein CLOSPO_03195 [Clostridium sporogenes ATCC
15579]
gi|187773224|gb|EDU37026.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
sporogenes ATCC 15579]
Length = 638
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 71/350 (20%)
Query: 27 VKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE 86
V LA+ GFC+GV+RA+ ++ + KI+ +IHN V L+ ++ P+
Sbjct: 3 VILADKAGFCFGVKRALDTTINTKENL-KGKIYTLGPLIHNNDVVNLLKGKGIE--PINI 59
Query: 87 GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYT 146
G D +NK D +++ + G ++ + L +K + +++TTCP V+ + +K+ + Y
Sbjct: 60 G--DVDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYK 117
Query: 147 SIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKA 206
+I G +H E + + I+ G +N L+K
Sbjct: 118 IVIVGDENHPEVIGINGWCNNSAIISKD-----------GSNINN--------LDK---- 154
Query: 207 VSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDA 266
KV + QTT E +E + V +++K + ++FNTIC+A
Sbjct: 155 ------------KVCVLCQTT----EKQENWEKVLNILIKK------SREILAFNTICNA 192
Query: 267 TQERQDAMYKMVEEKVDLILVVEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 326
TQ RQ A K+ EKVD ++V+ + I N +H VE
Sbjct: 193 TQVRQQAAKKL-SEKVDSMVVIGGKNSSNTTKLY-----EICKNN--CKNTIH---VENA 241
Query: 327 NWLP----KGQITIGITSGASTPDKAVEDVLKK------VFEIKREEALQ 366
+P K IG+T+GASTPD +++ + K + E+ + E L+
Sbjct: 242 KEIPEHIYKNSNIIGVTAGASTPDWIIKEAVNKMNNNDNIIEVSKNEMLE 291
>gi|260771131|ref|ZP_05880058.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
furnissii CIP 102972]
gi|375130090|ref|YP_004992189.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio furnissii NCTC
11218]
gi|260613728|gb|EEX38920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
furnissii CIP 102972]
gi|315179263|gb|ADT86177.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio furnissii NCTC
11218]
Length = 320
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 90/357 (25%)
Query: 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP 83
++K+ LA GFC GV+RA+ I A + + + I++ +E++HN V + L++ I
Sbjct: 4 SMKILLANPRGFCAGVDRAISIVERALEMY-QPPIYVRHEVVHNRFVVEGLKQRGA--IF 60
Query: 84 VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKG 143
VEE V ++V+ A G + + +++ + D TCP V+KV V + +
Sbjct: 61 VEE----LHEVPDDNIVIFSAHGVSQAVRMEAKARSLTVFDATCPLVTKVHMEVARASRR 116
Query: 144 DYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL-EK 202
+ ++ G H E T G+Y +S T +L E+
Sbjct: 117 NMEVVLIGHAGHPEVEGT---MGQY-----------------------ASDTGGMYLVER 150
Query: 203 FKKAVS---KGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS 259
V+ K DP + +QTT+ ET ++ ++ + E F
Sbjct: 151 PDDVVALQHKVKDPS----HLHYVSQTTLSVDETADV-------------IDKLREVFPE 193
Query: 260 F-----NTICDATQERQDAMYKMVEEKVDLILVV------------EIAEDRGIPSYWID 302
+ IC ATQ RQDA+ +++ + VD+++VV E+AE G P Y D
Sbjct: 194 IQGPRKDDICYATQNRQDAV-RLLAQDVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTD 252
Query: 303 SEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 359
+ I P W G IG+T+GAS P++ V +L ++ E+
Sbjct: 253 CPEDIHP-----------------EWF-DGVSKIGVTAGASAPEELVNQILNRIKEL 291
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,662,032,611
Number of Sequences: 23463169
Number of extensions: 234519064
Number of successful extensions: 522888
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 1967
Number of HSP's that attempted gapping in prelim test: 513074
Number of HSP's gapped (non-prelim): 6057
length of query: 368
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 224
effective length of database: 8,980,499,031
effective search space: 2011631782944
effective search space used: 2011631782944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)