Query 017615
Match_columns 368
No_of_seqs 120 out of 1064
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 17:18:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017615.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017615hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wd7a_ c.113.1.1 (A:) Probabl 77.6 16 0.0011 30.9 12.6 109 37-150 62-182 (254)
2 d1p3da1 c.5.1.1 (A:11-106) UDP 73.5 10 0.00075 28.0 9.0 60 58-123 34-95 (96)
3 d2j7ja3 g.37.1.1 (A:58-85) Tra 72.3 0.26 1.9E-05 29.4 -0.6 19 124-142 7-25 (28)
4 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 70.7 4.1 0.0003 30.2 5.9 59 59-123 28-88 (89)
5 d1xmta_ d.108.1.1 (A:) Hypothe 67.7 1.3 9.7E-05 33.5 2.4 31 103-134 45-79 (95)
6 d2fy8a1 c.2.1.9 (A:116-244) Po 66.7 1.1 8.4E-05 34.5 1.9 74 99-180 3-77 (129)
7 d2vzsa5 c.1.8.3 (A:336-674) Ex 65.8 6 0.00044 34.1 6.9 66 70-162 44-130 (339)
8 d2hrca1 c.92.1.1 (A:65-423) Fe 63.2 16 0.0012 33.1 9.7 95 32-142 128-225 (359)
9 d1r57a_ d.108.1.1 (A:) Hypothe 61.7 2.5 0.00018 31.9 3.0 32 102-134 47-82 (102)
10 d1s3la_ d.159.1.7 (A:) Putativ 60.6 25 0.0018 27.3 9.4 99 38-161 11-129 (165)
11 d1id1a_ c.2.1.9 (A:) Rck domai 59.5 5.4 0.0004 31.1 4.9 80 97-180 4-86 (153)
12 d1jyea_ c.93.1.1 (A:) Lac-repr 55.7 34 0.0025 28.2 10.0 123 226-357 8-142 (271)
13 d1lbqa_ c.92.1.1 (A:) Ferroche 50.0 19 0.0014 32.7 7.8 96 31-142 128-226 (356)
14 d1jeoa_ c.80.1.3 (A:) Probable 48.5 59 0.0043 25.7 10.4 88 42-156 26-118 (177)
15 d1gh2a_ c.47.1.1 (A:) Thioredo 42.9 30 0.0022 25.2 6.6 69 259-356 28-106 (107)
16 d1vpqa_ c.1.32.1 (A:) Hypothet 42.6 32 0.0023 29.7 7.7 124 25-150 109-238 (260)
17 d2d59a1 c.2.1.8 (A:4-142) Hypo 42.0 20 0.0015 28.1 5.7 33 99-131 101-133 (139)
18 d1lssa_ c.2.1.9 (A:) Ktn Mja21 41.0 6.5 0.00047 30.0 2.4 71 99-177 3-77 (132)
19 d1y81a1 c.2.1.8 (A:6-121) Hypo 39.1 23 0.0017 26.8 5.4 32 100-131 84-115 (116)
20 d1vpda2 c.2.1.6 (A:3-163) Hydr 39.0 54 0.0039 25.2 8.0 92 45-148 15-116 (161)
21 d1j4aa2 c.23.12.1 (A:2-103,A:3 38.8 57 0.0042 24.8 8.0 67 57-123 2-73 (134)
22 d2hmva1 c.2.1.9 (A:7-140) Ktn 38.3 16 0.0012 27.2 4.5 65 99-171 3-70 (134)
23 d2j13a1 c.6.2.3 (A:1-235) Puta 37.2 35 0.0025 28.5 6.9 73 4-83 147-227 (235)
24 d1jhfa1 a.4.5.2 (A:2-72) LexA 37.1 7.8 0.00056 27.3 2.1 39 103-148 19-57 (71)
25 d1yq2a5 c.1.8.3 (A:313-609) be 36.9 23 0.0017 30.1 5.7 50 104-161 56-125 (297)
26 d1jr2a_ c.113.1.1 (A:) Uroporp 36.4 67 0.0049 26.3 8.7 112 7-123 17-163 (260)
27 d8abpa_ c.93.1.1 (A:) L-arabin 36.3 60 0.0044 26.7 8.3 76 219-303 3-89 (305)
28 d1dxya2 c.23.12.1 (A:1-100,A:3 35.3 75 0.0054 23.8 8.1 66 58-123 3-72 (131)
29 d1tjya_ c.93.1.1 (A:) AI-2 rec 35.1 87 0.0063 25.2 9.1 81 218-307 4-97 (316)
30 d1ir6a_ c.107.1.2 (A:) Exonucl 34.9 59 0.0043 29.2 8.6 102 37-154 8-114 (385)
31 d1m3sa_ c.80.1.3 (A:) Hypothet 34.2 99 0.0072 24.3 9.1 39 94-132 77-119 (186)
32 d3cuma2 c.2.1.6 (A:1-162) Hydr 32.6 99 0.0072 23.6 9.9 94 44-148 15-117 (162)
33 d1iuka_ c.2.1.8 (A:) Hypotheti 32.3 22 0.0016 27.5 4.4 32 99-130 97-128 (136)
34 d2j13a1 c.6.2.3 (A:1-235) Puta 31.9 1.1E+02 0.0082 25.0 9.4 26 58-83 140-165 (235)
35 d2hk6a1 c.92.1.1 (A:2-310) Fer 31.1 19 0.0014 31.9 4.3 91 36-142 118-208 (309)
36 d1nrza_ c.38.1.1 (A:) Sorbose 28.9 46 0.0034 26.8 6.0 78 30-116 50-131 (163)
37 d1ny1a_ c.6.2.3 (A:) Probable 28.8 1.3E+02 0.0091 24.8 9.2 45 39-83 116-163 (235)
38 d2iw0a1 c.6.2.3 (A:29-248) Chi 28.1 69 0.005 26.0 7.2 27 57-83 111-137 (220)
39 d1z5ye1 c.47.1.10 (E:49-184) T 27.6 1.1E+02 0.0077 22.4 9.0 31 332-362 104-134 (136)
40 d1sc6a2 c.23.12.1 (A:7-107,A:2 27.6 33 0.0024 26.4 4.7 64 56-123 5-73 (132)
41 d1qwja_ c.68.1.13 (A:) CMP acy 26.9 1.1E+02 0.0083 23.7 8.3 98 40-156 32-136 (228)
42 d1vi2a1 c.2.1.7 (A:107-288) Pu 26.8 51 0.0037 26.1 5.9 58 98-155 20-80 (182)
43 d1xfla_ c.47.1.1 (A:) Thioredo 26.1 1.1E+02 0.0079 21.9 9.7 58 229-295 13-78 (114)
44 d1qcza_ c.23.8.1 (A:) N5-CAIR 26.1 25 0.0018 28.8 3.7 51 63-151 13-63 (163)
45 d1eeja1 c.47.1.9 (A:61-216) Di 26.0 15 0.0011 28.7 2.3 31 123-153 34-64 (156)
46 d2cc0a1 c.6.2.3 (A:1-192) Acet 25.4 1.5E+02 0.011 23.4 9.2 102 39-152 77-184 (192)
47 d2bona1 e.52.1.2 (A:5-299) Lip 24.8 52 0.0038 27.8 5.9 52 99-150 4-59 (295)
48 d1t3ba1 c.47.1.9 (A:61-210) Di 24.0 22 0.0016 27.6 2.9 32 122-153 33-64 (150)
49 d1ma3a_ c.31.1.5 (A:) AF0112, 23.8 72 0.0052 26.5 6.6 79 255-361 160-251 (252)
50 d2b8ea1 c.108.1.7 (A:416-434,A 23.3 1.3E+02 0.0097 22.7 7.7 65 68-153 27-91 (135)
51 d2fvya1 c.93.1.1 (A:2-306) Gal 23.2 1.7E+02 0.012 23.3 8.8 81 218-305 2-93 (305)
52 d1su1a_ d.159.1.7 (A:) Phospho 23.1 51 0.0037 25.3 5.1 55 24-81 1-67 (184)
53 d1pzxa_ c.119.1.1 (A:) Hypothe 22.7 1.1E+02 0.0078 26.2 7.7 70 72-151 16-86 (287)
54 d1h75a_ c.47.1.1 (A:) Glutared 22.3 34 0.0025 23.3 3.3 72 25-117 3-74 (76)
55 d2nzug1 c.93.1.1 (G:58-332) Gl 22.2 1.7E+02 0.013 23.0 12.1 120 218-347 4-134 (275)
56 d1lxja_ d.58.48.1 (A:) Hypothe 21.6 31 0.0022 26.1 3.2 56 3-61 23-78 (104)
57 d1hyua4 c.47.1.2 (A:103-198) A 21.0 1.3E+02 0.0093 21.0 7.3 67 7-80 4-70 (96)
58 d1j6ua2 c.59.1.1 (A:296-446) U 20.2 76 0.0055 24.1 5.5 51 290-358 99-149 (151)
No 1
>d1wd7a_ c.113.1.1 (A:) Probable uroporphyrinogen-III synthase {Thermus thermophilus [TaxId: 274]}
Probab=77.59 E-value=16 Score=30.87 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=62.4
Q ss_pred ccHHHHHHHHHHHHh----hCCCCceEEecccccCHHHHHHHHhcCcEEecCCc--cccccccccCC-CEEEEcCCC-CC
Q 017615 37 WGVERAVQIAYEARK----QFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE--GKKQFDVVNKG-DVVVLPAFG-AA 108 (368)
Q Consensus 37 ~GV~RAI~~a~~~~~----~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~--~~~~l~el~~g-~~VIIrAHG-v~ 108 (368)
.||+.-++...+.-. ...+.++++.|+ ..-+.|++.|+...-..+ ....+..+.++ .+++++.+| -.
T Consensus 62 ngV~~~~~~l~~~~~~~~~~l~~~~i~aVG~-----~Ta~aL~~~G~~~~~~~~~~s~~l~~~~~~~~~~~l~~~~~~~~ 136 (254)
T d1wd7a_ 62 VGVRDLLEAGKALGLDLEGPLAKAFRLARGA-----KAARALKEAGLPPHAVGDGTSKSLLPLLPQGRGVAALQLYGKPL 136 (254)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHTSEEEESSH-----HHHHHHHHTTCCCSEECSSSGGGGGGGCCCCCEEEEEECSSSCC
T ss_pred HHHHHHHHHHHHcCccHhHHhcCCeEEEECH-----HHHHHHHHcCCCCccCCchhHHHHHHHHhcCCCEEEEecccCCc
Confidence 467666665543210 011357999995 566899999997432111 11223344443 457888887 56
Q ss_pred HHHHHHHHhcCCcEEeCc----CchhHHHHHHHHHHhhCCceEEEE
Q 017615 109 VEEMVTLNNKNVQIVDTT----CPWVSKVWTSVEKHKKGDYTSIIH 150 (368)
Q Consensus 109 ~~~~~~l~~~g~~iiDaT----CP~V~kv~~~v~~~~~~Gy~IIIi 150 (368)
+...+.|+++|+.+.... .|.-.......+.+.+.+..+|++
T Consensus 137 ~~L~~~L~~~G~~v~~v~~Y~t~~~~~~~~~l~~~l~~~~~d~V~f 182 (254)
T d1wd7a_ 137 PLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAF 182 (254)
T ss_dssp HHHHHHHHHTTEEEEEECSEECCBCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHhccCcceEEEEeeeeccccChHHHHHHHhcCCceEEEe
Confidence 778899999997773332 343344444445554444444433
No 2
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=73.49 E-value=10 Score=28.01 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=38.4
Q ss_pred eEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCH--HHHHHHHhcCCcEE
Q 017615 58 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV--EEMVTLNNKNVQIV 123 (368)
Q Consensus 58 Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~--~~~~~l~~~g~~ii 123 (368)
-.+-.+.-.|+.+ ++|+++|+.+...-. -+.+++.|.||++ =++++ ..+.+++++|+.|+
T Consensus 34 ~VsGSD~~~~~~~-~~L~~~Gi~v~~g~~----~~~i~~~d~vV~S-~AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 34 QISGSDIADGVVT-QRLAQAGAKIYIGHA----EEHIEGASVVVVS-SAIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp EEEEEESCCSHHH-HHHHHTTCEEEESCC----GGGGTTCSEEEEC-TTSCTTCHHHHHHHHTTCCEE
T ss_pred EEEEEeCCCChhh-hHHHHCCCeEEECCc----cccCCCCCEEEEC-CCcCCCCHHHHHHHHcCCCEE
Confidence 3444467777765 788899998776421 2334444655544 55753 24677899999886
No 3
>d2j7ja3 g.37.1.1 (A:58-85) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=72.26 E-value=0.26 Score=29.45 Aligned_cols=19 Identities=42% Similarity=0.816 Sum_probs=15.1
Q ss_pred eCcCchhHHHHHHHHHHhh
Q 017615 124 DTTCPWVSKVWTSVEKHKK 142 (368)
Q Consensus 124 DaTCP~V~kv~~~v~~~~~ 142 (368)
|.|||||-|.|..-.+...
T Consensus 7 d~tc~fvgktwt~y~kh~a 25 (28)
T d2j7ja3 7 DDSCSFVGKTWTLYLKHVA 25 (28)
T ss_dssp CSSCCCEESSHHHHHHHHH
T ss_pred CCcccccchhHHHHHHHHH
Confidence 8899999999987655443
No 4
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=70.67 E-value=4.1 Score=30.17 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=36.5
Q ss_pred EEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCH--HHHHHHHhcCCcEE
Q 017615 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV--EEMVTLNNKNVQIV 123 (368)
Q Consensus 59 y~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~--~~~~~l~~~g~~ii 123 (368)
.+=.++--|+ ..++|+++|+.+-..- +.+.+.+.|.||+ +=++++ ..++.++++|+.|+
T Consensus 28 VsGSD~~~~~-~t~~L~~~Gi~i~~gh----~~~~i~~~d~vV~-SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 28 VYGSNIEETE-RTAYLRKLGIPIFVPH----SADNWYDPDLVIK-TPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp EEEECSSCCH-HHHHHHHTTCCEESSC----CTTSCCCCSEEEE-CTTCCTTCHHHHHHHHTTCCEE
T ss_pred EEEEeCCCCh-hHHHHHHCCCeEEeee----cccccCCCCEEEE-ecCcCCCCHHHHHHHHcCCCcc
Confidence 3334666555 5568999999875431 2233444565544 445552 35778999999885
No 5
>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=67.69 E-value=1.3 Score=33.49 Aligned_cols=31 Identities=23% Similarity=0.560 Sum_probs=23.8
Q ss_pred cCCCCC----HHHHHHHHhcCCcEEeCcCchhHHHH
Q 017615 103 PAFGAA----VEEMVTLNNKNVQIVDTTCPWVSKVW 134 (368)
Q Consensus 103 rAHGv~----~~~~~~l~~~g~~iiDaTCP~V~kv~ 134 (368)
|-.|+. ...++.++++|++|+ .+||||.+.+
T Consensus 45 rGqGia~~Lv~~al~~ar~~g~kV~-P~Cpyv~~~~ 79 (95)
T d1xmta_ 45 RGLGLASHLCVAAFEHASSHSISII-PSCSYVSDTF 79 (95)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCEEE-ECSHHHHHTH
T ss_pred CCChHHHHHHHHHHHHHHHCCCEEE-EeCHHHHHHH
Confidence 556665 455788899999887 9999997644
No 6
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}
Probab=66.70 E-value=1.1 Score=34.48 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=53.1
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEEecCCCcceeeecccCC-cEEEEcChhhH
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEA 177 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi~g~a~-~~~vv~~~~e~ 177 (368)
+||+-.-.++.++.+.|+..++.+||-. ...++.+...|+.+ +.||..+||+---.+... +++|+...+|.
T Consensus 3 ivI~G~g~~g~~l~~~L~~~~i~vi~~d-------~~~~~~~~~~~~~~-i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 3 VVICGWSESTLECLRELRGSEVFVLAED-------ENVRKKVLRSGANF-VHGDPTRVSDLEKANVRGARAVIVNLESDS 74 (129)
T ss_dssp EEEESCCHHHHHHHHTSCGGGEEEEESC-------TTHHHHHHHTTCEE-EESCTTSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred EEEECCCHHHHHHHHHHcCCCCEEEEcc-------hHHHHHHHhcCccc-cccccCCHHHHHHhhhhcCcEEEEeccchh
Confidence 3566666678888999998998888864 22345566789875 569999999876666543 56777666666
Q ss_pred HHh
Q 017615 178 EYV 180 (368)
Q Consensus 178 ~~~ 180 (368)
.++
T Consensus 75 ~n~ 77 (129)
T d2fy8a1 75 ETI 77 (129)
T ss_dssp HHH
T ss_pred hhH
Confidence 654
No 7
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=65.85 E-value=6 Score=34.08 Aligned_cols=66 Identities=9% Similarity=0.005 Sum_probs=43.3
Q ss_pred HHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCC-CHHHHHHHHhcCCcEEeC--cCc------------------
Q 017615 70 VNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA-AVEEMVTLNNKNVQIVDT--TCP------------------ 128 (368)
Q Consensus 70 Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv-~~~~~~~l~~~g~~iiDa--TCP------------------ 128 (368)
-++.++++|+.+|- + .|.. +|+.++.+-+.|+-|++- +||
T Consensus 44 ~l~~~k~~G~N~iR----------------~---~~~~~~~~f~d~~D~~Gi~V~~e~~~~~~w~~~~~~~~~~~~~~p~ 104 (339)
T d2vzsa5 44 KLKYVLNLGLNTVR----------------L---EGHIEPDEFFDIADDLGVLTMPGWECCDKWEGQVNGEEKGEPWVES 104 (339)
T ss_dssp HHHHHHHTTCCEEE----------------E---ESCCCCHHHHHHHHHHTCEEEEECCSSSGGGTTTSTTSSSCCCCTT
T ss_pred HHHHHHHcCCCEEE----------------e---cCCCCCHHHHHHHHHCCCeEecccccCccccccCCcccccCCCCHH
Confidence 45666777776662 1 2344 788999999999988762 343
Q ss_pred hhHHHHHHHHHHhhCCceEEEEecCCCcceeeec
Q 017615 129 WVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 162 (368)
Q Consensus 129 ~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi~ 162 (368)
+.....+.++++.++ .++||-|++-.
T Consensus 105 ~~~~~~~~~~~~v~r--------~rnHPsvi~W~ 130 (339)
T d2vzsa5 105 DYPIAKASMFSEAER--------LRDHPSVISFH 130 (339)
T ss_dssp HHHHHHHHHHHHHHH--------HTTCTTBCCEE
T ss_pred HHHHHHHHHHHHHHH--------hcCCCcEEEEe
Confidence 334555666666655 37999988653
No 8
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.22 E-value=16 Score=33.09 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCCCcccHHHHHHHHHHHHhhC---CCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCC
Q 017615 32 SYGFCWGVERAVQIAYEARKQF---PEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA 108 (368)
Q Consensus 32 ~~GFC~GV~RAI~~a~~~~~~~---~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~ 108 (368)
|.-=|+.+.-+++.+.+++++. +...+.....--.+|.-++.+.+.=...++..+ .+-.++..+||+|||+|
T Consensus 128 PqyS~sTtgs~~~~~~k~l~~~~~~~~~~~~~i~~~~~~p~yi~a~a~~i~~~~~~~~-----~~~~~~~~llfS~HglP 202 (359)
T d2hrca1 128 PQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFP-----LEKRSEVVILFSAHSLP 202 (359)
T ss_dssp SSCCTTTHHHHHHHHHHHHHHHTSCCSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSC-----GGGTTTCEEEEEEECCB
T ss_pred cccccchhcchhHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHhcc-----cccCCCceEEEeecccc
Confidence 3334888888888888877652 222445677888899998888765222222110 01123567999999999
Q ss_pred HHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhh
Q 017615 109 VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142 (368)
Q Consensus 109 ~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~ 142 (368)
....+ +| .|+=..+...++..++
T Consensus 203 ~~~~~----~g-------dpY~~q~~~t~~~i~~ 225 (359)
T d2hrca1 203 MSVVN----RG-------DPYPQEVSATVQKVME 225 (359)
T ss_dssp HHHHT----TT-------CSHHHHHHHHHHHHHH
T ss_pred eehhh----cC-------CchHHHHHHHHHHHHH
Confidence 76543 33 5666666666655544
No 9
>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}
Probab=61.67 E-value=2.5 Score=31.91 Aligned_cols=32 Identities=16% Similarity=0.405 Sum_probs=25.2
Q ss_pred EcCCCCCHH----HHHHHHhcCCcEEeCcCchhHHHH
Q 017615 102 LPAFGAAVE----EMVTLNNKNVQIVDTTCPWVSKVW 134 (368)
Q Consensus 102 IrAHGv~~~----~~~~l~~~g~~iiDaTCP~V~kv~ 134 (368)
+|-.|+... ..+.++++|++|+ .+|||+.+-.
T Consensus 47 ~RG~Gig~~Lv~~~l~~Ar~~g~kvv-p~c~y~~~~~ 82 (102)
T d1r57a_ 47 LGGQGVGKKLLKAVVEHARENNLKII-ASCSFAKHML 82 (102)
T ss_dssp SSTTCTHHHHHHHHHHHHHHHTCEEE-ESSHHHHHHH
T ss_pred HCCccHHHHHHHHHHHHHHHCCCEEE-EecHhHHHHH
Confidence 366788754 4677889999988 9999998754
No 10
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=60.62 E-value=25 Score=27.33 Aligned_cols=99 Identities=16% Similarity=0.135 Sum_probs=61.2
Q ss_pred cHHHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEec--CCcccc------------------ccccccCC
Q 017615 38 GVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP--VEEGKK------------------QFDVVNKG 97 (368)
Q Consensus 38 GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~--~~~~~~------------------~l~el~~g 97 (368)
|=-.|++.+.+.+++.+-..|+.+|+++ ++.+.+.|.+....++- .+.+.. +...+.-+
T Consensus 11 gn~~al~~vl~~~~~~~~D~ii~~GD~~-~~~~~~~l~~~~~~~~~v~GN~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (165)
T d1s3la_ 11 DHLPNIRKAIEIFNDENVETVIHCGDFV-SLFVIKEFENLNANIIATYGNNDGERCKLKEWLKDINEENIIDDFISVEID 89 (165)
T ss_dssp TCHHHHHHHHHHHHHSCCSEEEECSCCC-STHHHHHGGGCSSEEEEECCTTCCCHHHHHHHHHHHCTTCEEESEEEEEET
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCcc-CHHHHHHHhhcCccEEEEcccccccchhhhHhhhhhcccccCChhhceEEC
Confidence 3356777776665543335799999998 56788999888766542 211100 00011113
Q ss_pred CEEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEEecCCCcceeee
Q 017615 98 DVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 161 (368)
Q Consensus 98 ~~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi 161 (368)
..-|+=.||-++...+.+ +...++.++++|+--.|-+.-.
T Consensus 90 ~~~i~l~Hg~~~~~~~~~------------------------~~~~~~d~v~~GHtH~~~~~~~ 129 (165)
T d1s3la_ 90 DLKFFITHGHHQSVLEMA------------------------IKSGLYDVVIYGHTHERVFEEV 129 (165)
T ss_dssp TEEEEEEESCCHHHHHHH------------------------HHHSCCSEEEEECSSCCEEEEE
T ss_pred CcEEEEEECCcccHHHHH------------------------hhcCCCCEEEECCcCcceEEEE
Confidence 344555899887765432 2356789999999888877654
No 11
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=59.47 E-value=5.4 Score=31.14 Aligned_cols=80 Identities=13% Similarity=0.189 Sum_probs=57.0
Q ss_pred CCEEEEcCCCCCHHHHHHHHhcCCcE--EeCcCchhHHHHHHHHHHhhCCceEEEEecCCCcceeeecccCC-cEEEEcC
Q 017615 97 GDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKN 173 (368)
Q Consensus 97 g~~VIIrAHGv~~~~~~~l~~~g~~i--iDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi~g~a~-~~~vv~~ 173 (368)
+-+||+-..-++..+.+.|.++|..+ ||- .-.+....+.++..+|+.+ ++|+..+|++---.|.-. +++|+..
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~---d~~~~~~~~~~~~~~~~~v-i~Gd~~d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQNVTVISN---LPEDDIKQLEQRLGDNADV-IPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEEC---CCHHHHHHHHHHHCTTCEE-EESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEec---cchhHHHHHHHhhcCCcEE-EEccCcchHHHHHhccccCCEEEEcc
Confidence 44677777778899999999998765 542 2245667777787888877 589999999865555442 5677666
Q ss_pred hhhHHHh
Q 017615 174 MKEAEYV 180 (368)
Q Consensus 174 ~~e~~~~ 180 (368)
.+|..++
T Consensus 80 ~~d~~n~ 86 (153)
T d1id1a_ 80 DNDADNA 86 (153)
T ss_dssp SCHHHHH
T ss_pred ccHHHHH
Confidence 5555553
No 12
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=55.69 E-value=34 Score=28.23 Aligned_cols=123 Identities=11% Similarity=0.111 Sum_probs=66.7
Q ss_pred CCCChHHHHHHHHHHHHHHhhhcccccccccccccCcccHHHHHHHHHHHHhhhhcCCEEEEe----------hhhhccC
Q 017615 226 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV----------EIAEDRG 295 (368)
Q Consensus 226 TT~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV----------eia~~~~ 295 (368)
+.++..-|.++++.+++...+. + .++.++.+==.....-++.++.|.++++|.+||. +-+.+.+
T Consensus 8 ~~l~~~~~~~i~~~i~~~a~~~-G-----y~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~ 81 (271)
T d1jyea_ 8 SSLALHAPSQIVAAILSRADQL-G-----ASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTN 81 (271)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHT-T-----CEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTT
T ss_pred CCCCChHHHHHHHHHHHHHHHc-C-----CEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEeccccCchhHHHHHHHhcC
Confidence 4556667778888887643322 2 2333322210123344455777766789999986 3345677
Q ss_pred CCeEEeCCCCCcCCCCcchh-hhccchhhhhcccc-cCCCcEEEEeecCCCcHHHHHHHHHHHH
Q 017615 296 IPSYWIDSEKRIGPGNKIAY-KLMHGELVEKENWL-PKGQITIGITSGASTPDKAVEDVLKKVF 357 (368)
Q Consensus 296 ~~t~~Ie~~~eL~~~~~~~~-~~~~~~~~~~~~~l-~~~~~~VGITAGASTP~~lI~eVi~~l~ 357 (368)
.|..+++...+..-. .+.. ....+.. --++| .+|+++||+-+|-....+..+....+.+
T Consensus 82 iPvV~~d~~~~~~~~-~V~~D~~~~~~~--~~~~L~~~G~~~i~~i~~~~~~~~~~~R~~g~~~ 142 (271)
T d1jyea_ 82 VPALFLDVSDQTPIN-SIIFSHEDGTRL--GVEHLVALGHQQIALLAGPLSSVSARLRLAGWHK 142 (271)
T ss_dssp SCEEESSSCTTSSSC-EEEECHHHHHHH--HHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCeeeeeccccccCC-ccccchhhcccc--ceeeeeccccccccccccccccchHHhhhHHHHH
Confidence 899999876543221 1110 0011111 11222 2478899999887666665555544443
No 13
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.05 E-value=19 Score=32.69 Aligned_cols=96 Identities=9% Similarity=-0.014 Sum_probs=56.5
Q ss_pred CCCCCcccHHHHHHHHHHHHhh---CCCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCC
Q 017615 31 ESYGFCWGVERAVQIAYEARKQ---FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA 107 (368)
Q Consensus 31 ~~~GFC~GV~RAI~~a~~~~~~---~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv 107 (368)
-|.-=|....-+++.+.++++. .+.-++-+..+-=-+|.-++.|.+.--..++..+ ....+++.+||++||+
T Consensus 128 yPqyS~sTt~s~~~~v~~~l~~~~~~~~~~~~~I~~~~~~p~yI~a~a~~i~~~l~~~~-----~~~~~~~~LlfS~Hgi 202 (356)
T d1lbqa_ 128 YPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQEFP-----QPVRDKVVLLFSAHSL 202 (356)
T ss_dssp CSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSC-----STTGGGCEEEEEEECC
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhccccceeecccccchhHHHHHHHHHHHHHHHcC-----cccccCcEEEEecCCc
Confidence 3444467777888888776643 1122356677777788888887665333232210 0011346799999999
Q ss_pred CHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhh
Q 017615 108 AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142 (368)
Q Consensus 108 ~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~ 142 (368)
|....+ + -.|+-.-++..++..++
T Consensus 203 P~~~~~----~-------gdpY~~q~~~t~~~v~~ 226 (356)
T d1lbqa_ 203 PMDVVN----T-------GDAYPAEVAATVYNIMQ 226 (356)
T ss_dssp BHHHHT----T-------TCSHHHHHHHHHHHHHH
T ss_pred ccchhh----c-------CCCchHHHHHHHHHHhh
Confidence 976432 2 34666666665554433
No 14
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=48.54 E-value=59 Score=25.66 Aligned_cols=88 Identities=15% Similarity=0.102 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhCCCCceEEecccccC----HHHHHHHHhcCcEEecCCccccccccccCCCEE-EEcCCCCCHHHHHHHH
Q 017615 42 AVQIAYEARKQFPEEKIWITNEIIHN----PTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVV-VLPAFGAAVEEMVTLN 116 (368)
Q Consensus 42 AI~~a~~~~~~~~~~~Vy~lG~iIHN----~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~V-IIrAHGv~~~~~~~l~ 116 (368)
.++.+-+.+.+ .++||++|-= +. .....+|...|+...--.+. ....+.++|.| +|+..|-++++.+.++
T Consensus 26 ~i~~~~~~i~~--a~~I~~~G~G-~S~~~a~~~~~~l~~lg~~~~~~~~~--~~~~~~~~Dl~I~iS~sG~t~~~i~~~~ 100 (177)
T d1jeoa_ 26 KLDSLIDRIIK--AKKIFIFGVG-RSGYIGRCFAMRLMHLGFKSYFVGET--TTPSYEKDDLLILISGSGRTESVLTVAK 100 (177)
T ss_dssp HHHHHHHHHHH--CSSEEEECCH-HHHHHHHHHHHHHHHTTCCEEETTST--TCCCCCTTCEEEEEESSSCCHHHHHHHH
T ss_pred HHHHHHHHHHC--CCeEEEEEcc-HHHHHHHHHHHHHHhcCCcccccccc--cccccCCCCeEEEeccccchHHHHHHHH
Confidence 34444444443 2468888731 01 12234577778655432110 11234567764 6999999999987663
Q ss_pred hcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEEecCCCc
Q 017615 117 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHE 156 (368)
Q Consensus 117 ~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~Hp 156 (368)
...++|..||.+=...+|
T Consensus 101 ----------------------~ak~~g~~vI~IT~~~~~ 118 (177)
T d1jeoa_ 101 ----------------------KAKNINNNIIAIVCECGN 118 (177)
T ss_dssp ----------------------HHHTTCSCEEEEESSCCG
T ss_pred ----------------------HHHHcCCceeEEecCCCc
Confidence 344567766666655555
No 15
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.85 E-value=30 Score=25.23 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=45.4
Q ss_pred ccCcccHHHHHHHHHHHHhhhhcCCEEEEe-------hhhhccC---CCeEEeCCCCCcCCCCcchhhhccchhhhhccc
Q 017615 259 SFNTICDATQERQDAMYKMVEEKVDLILVV-------EIAEDRG---IPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 328 (368)
Q Consensus 259 ~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV-------eia~~~~---~~t~~Ie~~~eL~~~~~~~~~~~~~~~~~~~~~ 328 (368)
++.+.|..-+.=...+.+|+.+--|+.++- ++|++.+ .||+. +
T Consensus 28 F~a~wC~~Ck~~~p~~~~la~~~~~~~f~~vd~d~~~~l~~~~~v~~~Pt~~---------------------------~ 80 (107)
T d1gh2a_ 28 FTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQ---------------------------F 80 (107)
T ss_dssp EECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEE---------------------------E
T ss_pred EECCCCCCccccchhhhccccccccccccccccccchhhhhhcCceeceEEE---------------------------E
Confidence 567888888777777888875444655443 7777655 34543 3
Q ss_pred ccCCCcEEEEeecCCCcHHHHHHHHHHH
Q 017615 329 LPKGQITIGITSGASTPDKAVEDVLKKV 356 (368)
Q Consensus 329 l~~~~~~VGITAGASTP~~lI~eVi~~l 356 (368)
| ++.+.|+--.|+ .|+.|.+.+-++|
T Consensus 81 ~-~~G~~v~~~~G~-~~~~l~~~i~k~l 106 (107)
T d1gh2a_ 81 F-RNKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp E-ETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred E-ECCEEEEEEeCC-CHHHHHHHHHHhh
Confidence 4 356678888896 6777766665554
No 16
>d1vpqa_ c.1.32.1 (A:) Hypothetical protein TM1631 {Thermotoga maritima [TaxId: 2336]}
Probab=42.60 E-value=32 Score=29.67 Aligned_cols=124 Identities=11% Similarity=0.098 Sum_probs=62.6
Q ss_pred eEEEEe-CCCCCcccHHHHHHHHHHHHhhCCCC-ceEEecccccCHHHHHHHHhcCcEEecC-Cccccc---cccccCCC
Q 017615 25 VKVKLA-ESYGFCWGVERAVQIAYEARKQFPEE-KIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQ---FDVVNKGD 98 (368)
Q Consensus 25 mkI~lA-~~~GFC~GV~RAI~~a~~~~~~~~~~-~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~-~~~~~~---l~el~~g~ 98 (368)
+..++. -|..|=++-+ .++..+..++..+.+ -|=..++==+++.+.+-|++.||..|-. .....+ .......+
T Consensus 109 lg~~L~Q~Ppsf~~~~~-~~~~L~~~~~~~p~~~AvE~Rh~sW~~~~~~~~L~~~~v~~V~~D~p~~~~~~p~~~~~t~~ 187 (260)
T d1vpqa_ 109 LKMTLAQFPFSFKFSRK-NVEYLEKLRESYPYELAVEFRHYSWDREETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTD 187 (260)
T ss_dssp EEEEEEECCTTCCCCHH-HHHHHHHHHHHCCSCEEEECCBGGGCSHHHHHHHHHHTCEEEEEECCCCTTBCCCCCCCSSS
T ss_pred CCeEEEeCCCCCCCCHH-HHHHHHHHHHhCCcceEEEeCCchhccHHHHHHHHHcCCEEEEECCCCCCCCCCcccccCCC
Confidence 343443 4556666644 455556666554321 1333455568899999999999986542 111110 01111356
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEE
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIH 150 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIi 150 (368)
.+.+|-||-+..-+..-.+ .---.|=|=+.-+..-..+++++++|..|.++
T Consensus 188 ~~y~RlhGr~~~~~~~~~~-~~~~y~Ys~~eL~~~a~~i~~~~~~~~~vyv~ 238 (260)
T d1vpqa_ 188 YAYFRFHGRNERWFEAEGE-ERYDYLYSEEELKTLFEDVVELSRRVKETYVF 238 (260)
T ss_dssp EEEEEECCCCTTTTTCCGG-GTTCCCCCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred eeEEEEccCCccccccccc-hhhccCCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 7999999975321100000 00000111111123344566777788777544
No 17
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=41.96 E-value=20 Score=28.10 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=28.3
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhH
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVS 131 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~ 131 (368)
.|++-.-|.+++..+.++++|+.++.--|+.|.
T Consensus 101 ~v~~~~G~~~ee~~~~a~~~gi~vig~~C~~v~ 133 (139)
T d2d59a1 101 VVWFQYNTYNREASKKADEAGLIIVANRCMMRE 133 (139)
T ss_dssp EEEECTTCCCHHHHHHHHHTTCEEEESCCHHHH
T ss_pred EEEEeccccCHHHHHHHHHCCCEEEcCCcChhh
Confidence 467778888999999999999999998998765
No 18
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=40.99 E-value=6.5 Score=29.97 Aligned_cols=71 Identities=18% Similarity=0.202 Sum_probs=47.6
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcE--EeCcCchhHHHHHHHHHHhhC-CceEEEEecCCCcceeeecccCC-cEEEEcCh
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKG-DYTSIIHGKYSHEETVATASFAG-KYIIVKNM 174 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~i--iDaTCP~V~kv~~~v~~~~~~-Gy~IIIiG~~~HpEv~gi~g~a~-~~~vv~~~ 174 (368)
+||+-+--++..+.+.|.++|..| ||.- ..+++++.++ |+. +|+|+..+|++---.|... ++++....
T Consensus 3 IvI~G~G~~G~~la~~L~~~g~~v~vid~d-------~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 3 IIIAGIGRVGYTLAKSLSEKGHDIVLIDID-------KDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESC-------HHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred EEEECCCHHHHHHHHHHHHCCCCcceecCC-------hhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCC
Confidence 466776667888899999999665 6654 3344445444 544 7889999999887766553 55555444
Q ss_pred hhH
Q 017615 175 KEA 177 (368)
Q Consensus 175 ~e~ 177 (368)
+|-
T Consensus 75 ~d~ 77 (132)
T d1lssa_ 75 KEE 77 (132)
T ss_dssp CHH
T ss_pred cHH
Confidence 443
No 19
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=39.11 E-value=23 Score=26.77 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=25.7
Q ss_pred EEEcCCCCCHHHHHHHHhcCCcEEeCcCchhH
Q 017615 100 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVS 131 (368)
Q Consensus 100 VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~ 131 (368)
+++-..+..++..+.+++.|+.++---|+.|.
T Consensus 84 v~~~~g~~~~~~~~~a~~~gi~vigpnC~~ve 115 (116)
T d1y81a1 84 LWFQPGAESEEIRRFLEKAGVEYSFGRCIMVE 115 (116)
T ss_dssp EEECTTSCCHHHHHHHHHHTCEEECSCCHHHH
T ss_pred EEeccchhhHHHHHHHHHcCCEEEcCCCCCEe
Confidence 45555667888999999999999988898774
No 20
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}
Probab=38.99 E-value=54 Score=25.24 Aligned_cols=92 Identities=8% Similarity=0.070 Sum_probs=61.9
Q ss_pred HHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCcccccccccc-CCCEEEEcCCCCCHHHHHHHH-------
Q 017615 45 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVN-KGDVVVLPAFGAAVEEMVTLN------- 116 (368)
Q Consensus 45 ~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~-~g~~VIIrAHGv~~~~~~~l~------- 116 (368)
+|...++. +-.|+.+. -|+.-.+.|.+.|..+.++. .++. .-| +||-+=.-++.+.+-+.
T Consensus 15 ~A~~L~~~--G~~V~~~d---~~~~~~~~~~~~~~~~~~~~------~e~~~~~d-~ii~~v~~~~~v~~v~~~~~~~~~ 82 (161)
T d1vpda2 15 MSKNLLKA--GYSLVVSD---RNPEAIADVIAAGAETASTA------KAIAEQCD-VIITMLPNSPHVKEVALGENGIIE 82 (161)
T ss_dssp HHHHHHHT--TCEEEEEC---SCHHHHHHHHHTTCEECSSH------HHHHHHCS-EEEECCSSHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHC--CCeEEEEe---CCcchhHHHHHhhhhhcccH------HHHHhCCC-eEEEEcCCHHHHHHHHhCCcchhh
Confidence 56666664 34677765 47899999999999988753 3332 234 44444444455554331
Q ss_pred --hcCCcEEeCcCchhHHHHHHHHHHhhCCceEE
Q 017615 117 --NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148 (368)
Q Consensus 117 --~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~II 148 (368)
++|.-+||.|=-.....++.++.+.++|...+
T Consensus 83 ~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~v 116 (161)
T d1vpda2 83 GAKPGTVLIDMSSIAPLASREISDALKAKGVEML 116 (161)
T ss_dssp HCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred ccCCCCEEEECCCCCHHHHHHHHHHHHHcCCcee
Confidence 35778999887777888899999988886654
No 21
>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=38.79 E-value=57 Score=24.85 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=38.8
Q ss_pred ceEEecccccCHHHHHHHHhc--CcEEecCCcc--ccccccccCCCEEEEc-CCCCCHHHHHHHHhcCCcEE
Q 017615 57 KIWITNEIIHNPTVNKRLEEM--AVQNIPVEEG--KKQFDVVNKGDVVVLP-AFGAAVEEMVTLNNKNVQIV 123 (368)
Q Consensus 57 ~Vy~lG~iIHN~~Vv~~L~~~--GV~~v~~~~~--~~~l~el~~g~~VIIr-AHGv~~~~~~~l~~~g~~ii 123 (368)
+|.++|..=+-....++|.++ ++.+...... .+..+.+..-+.|+++ ...++.++++.+.+.|+++|
T Consensus 2 KI~~f~~~~~e~~~~e~~~~~~~~v~v~~~~~~~~~e~~~~~~~~d~viv~~~~~i~~eil~~l~~~~LK~I 73 (134)
T d1j4aa2 2 KIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALADNGITKM 73 (134)
T ss_dssp EEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEE
T ss_pred eEEEEecccccHHHHHHHHHhCCCEEEEECCCCCCHHHHHHhcCCCEEEEecCCCcCHHHHhhhcccCeeEE
Confidence 355666655555556666544 3554432211 1112222223556664 56789999999999899887
No 22
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=38.31 E-value=16 Score=27.23 Aligned_cols=65 Identities=14% Similarity=0.128 Sum_probs=43.7
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcE--EeCcCchhHHHHHHHHHHhhCCceEEEEecCCCcceeeecccCC-cEEEE
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIV 171 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~i--iDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi~g~a~-~~~vv 171 (368)
.||+-+==+...+.+.|.++|..+ ||.. .+.++++.+.|+.+ ++|+..+|++---.|... +.+++
T Consensus 3 ~iIiG~G~~G~~la~~L~~~g~~vvvid~d-------~~~~~~~~~~~~~~-~~gd~~~~~~l~~a~i~~a~~vi~ 70 (134)
T d2hmva1 3 FAVIGLGRFGGSIVKELHRMGHEVLAVDIN-------EEKVNAYASYATHA-VIANATEENELLSLGIRNFEYVIV 70 (134)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEESC-------HHHHHHTTTTCSEE-EECCTTCTTHHHHHTGGGCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEecCc-------HHHHHHHHHhCCcc-eeeecccchhhhccCCccccEEEE
Confidence 355544334677888999888665 6654 56677788899875 579999998865554432 34444
No 23
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=37.18 E-value=35 Score=28.49 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=39.9
Q ss_pred cccchHHHHHHhcCCcceecceEEE---EeCCCCCcccHHHHHHHHHHHHhhCCCCceEEecccccC-----HHHHHHHH
Q 017615 4 EYTSDIIKKLKENGFEYTWGNVKVK---LAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHN-----PTVNKRLE 75 (368)
Q Consensus 4 ~y~~~~~~~~~~~~~~~~~g~mkI~---lA~~~GFC~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN-----~~Vv~~L~ 75 (368)
.|..++.+.+++.|+.....++... .... .+++.+.+.+.+.++ ++.|..+++..-+ |.+++.|+
T Consensus 147 ~~~~~~~~~l~~~Gy~~~~w~~~~~Dw~~~~~----~~~~~~~~~~~~~~~---~g~IillHd~~~~t~~aL~~li~~lk 219 (235)
T d2j13a1 147 VFSERTLALTKEMGYYNVFWSLAFLDWKVDEQ----RGWQYAHNNVMTMIH---PGSILLLHAISKDNAEALAKIIDDLR 219 (235)
T ss_dssp EECHHHHHHHHHTTCEEECCSEECCCC----------------------CC---TTBEEEECCCSTTHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHcCCeEeecCCCCCCCccccc----hhHHHHHHHHHhcCC---CCcEEEecCCCcCHHHHHHHHHHHHH
Confidence 4677889999999976544332210 1111 122333333322222 3469988875443 78899999
Q ss_pred hcCcEEec
Q 017615 76 EMAVQNIP 83 (368)
Q Consensus 76 ~~GV~~v~ 83 (368)
++|.+|+.
T Consensus 220 ~~Gy~fvt 227 (235)
T d2j13a1 220 EKGYHFKS 227 (235)
T ss_dssp HTTCEEEC
T ss_pred HCCCEEEE
Confidence 99999994
No 24
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=37.10 E-value=7.8 Score=27.29 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=31.8
Q ss_pred cCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEE
Q 017615 103 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148 (368)
Q Consensus 103 rAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~II 148 (368)
..||.||.+.+-++..|+. -...+|..+..|.++||---
T Consensus 19 ~~~G~~Ps~rei~~~~g~~-------S~stv~~~l~~Le~kG~I~r 57 (71)
T d1jhfa1 19 SQTGMPPTRAEIAQRLGFR-------SPNAAEEHLKALARKGVIEI 57 (71)
T ss_dssp HHHSSCCCHHHHHHHTTCS-------SHHHHHHHHHHHHHTTSEEE
T ss_pred HHhCCCCCHHHHHHHcCCC-------CHHHHHHHHHHHHHCcCeec
Confidence 4589999999999988753 24679999999999998644
No 25
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=36.91 E-value=23 Score=30.06 Aligned_cols=50 Identities=8% Similarity=0.062 Sum_probs=34.4
Q ss_pred CCCC-CHHHHHHHHhcCCcEEeCc-------------------CchhHHHHHHHHHHhhCCceEEEEecCCCcceeee
Q 017615 104 AFGA-AVEEMVTLNNKNVQIVDTT-------------------CPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 161 (368)
Q Consensus 104 AHGv-~~~~~~~l~~~g~~iiDaT-------------------CP~V~kv~~~v~~~~~~Gy~IIIiG~~~HpEv~gi 161 (368)
+|.. ++..++.+-+.|+-|+|-. +-+-.+..+.++++.++ +++||-|+.=
T Consensus 56 ~h~p~~~~~~d~cD~~Gilv~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~emV~r--------~~NHPSIi~W 125 (297)
T d1yq2a5 56 SHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVER--------DKNHPSIVMW 125 (297)
T ss_dssp TTSCCCHHHHHHHHHHTCEEEEECSCBCGGGTTTTTTTCGGGCGGGHHHHHHHHHHHHHH--------HTTCTTEEEE
T ss_pred cCCCChHHHHHHHHhcCCEEEEeeccccccccccCccCCccccHHHHHHHHHHHHHHHHH--------hCCCCceEee
Confidence 4555 4799999999999998631 12445566666666555 3699988765
No 26
>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.38 E-value=67 Score=26.31 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=68.3
Q ss_pred chHHHHHHhcCCcceecc-eEEEE-------------eCCCCCcccHHHHHHHHHHHHhhCC--------------CCce
Q 017615 7 SDIIKKLKENGFEYTWGN-VKVKL-------------AESYGFCWGVERAVQIAYEARKQFP--------------EEKI 58 (368)
Q Consensus 7 ~~~~~~~~~~~~~~~~g~-mkI~l-------------A~~~GFC~GV~RAI~~a~~~~~~~~--------------~~~V 58 (368)
+++++.|++.|+....=. ++|.- ....++-|==++||+...+.+++.+ +.++
T Consensus 17 d~~~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~~~~~d~iifTS~~aV~~~~~~l~~~~~~~~~~~~~~~~~~~~~i 96 (260)
T d1jr2a_ 17 DPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSV 96 (260)
T ss_dssp CHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHHHHHHHHHHHHHTTCHHHHHHHTHHHHHHSEE
T ss_pred cHHHHHHHhCCCcEEEECCEEEeeCChHHHHHHHhChhhccEEEEeCchHHHHHHHHHHhhCcchhhhhhhhhhhccCeE
Confidence 468999999997665542 33321 1223445555666666655544321 2379
Q ss_pred EEecccccCHHHHHHHHhcCcEEecCCccc-ccc-c-----cccCCCEEEEcCCCCCHHHHHHHHhcCCcEE
Q 017615 59 WITNEIIHNPTVNKRLEEMAVQNIPVEEGK-KQF-D-----VVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 123 (368)
Q Consensus 59 y~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~-~~l-~-----el~~g~~VIIrAHGv~~~~~~~l~~~g~~ii 123 (368)
|+.|+ ..-+.|++.|+...-..... ..+ + ....+..+++++=+..+...+.|+++|..+-
T Consensus 97 ~aVG~-----~Ta~~l~~~G~~~~~~~~~~s~~l~~~~~~~~~~~~~il~~~g~~~~~~L~~~L~~~g~~v~ 163 (260)
T d1jr2a_ 97 YVVGN-----ATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAME 163 (260)
T ss_dssp EECSH-----HHHHHHHHTTCCCSCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEE
T ss_pred EEEcH-----HHHHHHHHcCCCccccccccHHHHHHHHhhhcccCceEEEeeccccchHHHHHHHhcCCcce
Confidence 99996 45688999999754221110 111 1 1122446777877788888999999998773
No 27
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=36.31 E-value=60 Score=26.66 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=48.6
Q ss_pred eeEEEEcCCCChHHHHHHHHHHHHHHhhhcccccccccccccCcccHHHHHHHHHHHHhhhhcCCEEEEe----------
Q 017615 219 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV---------- 288 (368)
Q Consensus 219 kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV---------- 288 (368)
||+++.++.-+.. |..+.+.++....+. + .++...+. +-..+-.+.++.|.+..+|.+|+.
T Consensus 3 kIg~v~~~~~~p~-~~~~~~g~~~aa~~~-G-----~~~i~~~~--~d~~~q~~~i~~li~~~vDgiIi~~~~~~~~~~~ 73 (305)
T d8abpa_ 3 KLGFLVKQPEEPW-FQTEWKFADKAGKDL-G-----FEVIKIAV--PDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAI 73 (305)
T ss_dssp EEEEEESCTTSHH-HHHHHHHHHHHHHHH-T-----EEEEEEEC--CSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHH
T ss_pred EEEEEeCCCCCHH-HHHHHHHHHHHHHHc-C-----CEEEEEcC--CCHHHHHHHHHHHHHcCCCEEEEccccccccHHH
Confidence 7899988776644 677777776543322 3 22332222 223334456666656799999999
Q ss_pred -hhhhccCCCeEEeCC
Q 017615 289 -EIAEDRGIPSYWIDS 303 (368)
Q Consensus 289 -eia~~~~~~t~~Ie~ 303 (368)
+-+++.|.|...+.+
T Consensus 74 ~~~a~~~giPVV~~d~ 89 (305)
T d8abpa_ 74 VAKARGYDMKVIAVDD 89 (305)
T ss_dssp HHHHHHTTCEEEEESS
T ss_pred HHHHHhcCCCEEEEcC
Confidence 456678999999865
No 28
>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=35.32 E-value=75 Score=23.79 Aligned_cols=66 Identities=8% Similarity=-0.056 Sum_probs=36.9
Q ss_pred eEEecccccCHHHHHHHHh-cCcEEecCCc--cccccccccCCCEEEEcCC-CCCHHHHHHHHhcCCcEE
Q 017615 58 IWITNEIIHNPTVNKRLEE-MAVQNIPVEE--GKKQFDVVNKGDVVVLPAF-GAAVEEMVTLNNKNVQIV 123 (368)
Q Consensus 58 Vy~lG~iIHN~~Vv~~L~~-~GV~~v~~~~--~~~~l~el~~g~~VIIrAH-Gv~~~~~~~l~~~g~~ii 123 (368)
|.+++..--.....++|.+ .|+.+....+ ..+.+..++.=|.++++.+ -+++++++.+.+.++++|
T Consensus 3 Il~~~~~~~e~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~vl~~l~~~~Lk~I 72 (131)
T d1dxya2 3 IIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFL 72 (131)
T ss_dssp EEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEE
T ss_pred EEEEecCcCcHHHHHHHHHHcCeEEEEcCCCCCHHHHHHhcCCCEEEEecCCCCCHHHHhhcccCCeEEE
Confidence 4555543333445556543 4765433221 1122233333355667654 578999999988888887
No 29
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=35.05 E-value=87 Score=25.25 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=50.7
Q ss_pred ceeEEEEcCCCChHHHHHHHHHHHHHHhhhccccccccccccc-CcccHHHHHHH-HHHHHhhhhcCCEEEEe-------
Q 017615 218 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-NTICDATQERQ-DAMYKMVEEKVDLILVV------- 288 (368)
Q Consensus 218 ~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-nTIC~AT~~RQ-~a~~eLa~~~vD~miVV------- 288 (368)
++|+++.+.. +-.-|..+.+-+++... .++. ++.+. ++- ....+| +.++.|.++.+|.+|+.
T Consensus 4 ~kI~~i~~~~-~npf~~~~~~g~~~~a~-~~G~-----~v~~~~~~~--~d~~~q~~~i~~~i~~~~dgIIi~~~~~~~~ 74 (316)
T d1tjya_ 4 ERIAFIPKLV-GVGFFTSGGNGAQEAGK-ALGI-----DVTYDGPTE--PSVSGQVQLVNNFVNQGYDAIIVSAVSPDGL 74 (316)
T ss_dssp CEEEEECSSS-SSHHHHHHHHHHHHHHH-HHTC-----EEEECCCSS--CCHHHHHHHHHHHHHTTCSEEEECCSSSSTT
T ss_pred CEEEEEeCCC-CCHHHHHHHHHHHHHHH-HcCC-----EEEEEECCC--CCHHHHHHHHHHHHhcCCCeeeecccccchh
Confidence 5899998876 55668888888876433 3232 23222 111 234454 34555555789999998
Q ss_pred ----hhhhccCCCeEEeCCCCCc
Q 017615 289 ----EIAEDRGIPSYWIDSEKRI 307 (368)
Q Consensus 289 ----eia~~~~~~t~~Ie~~~eL 307 (368)
+-+++.+.+...+.+...-
T Consensus 75 ~~~~~~a~~~gi~vv~~d~~~~~ 97 (316)
T d1tjya_ 75 CPALKRAMQRGVKILTWDSDTKP 97 (316)
T ss_dssp HHHHHHHHHTTCEEEEESSCCCG
T ss_pred hhhhhhhhcccccceeccccccc
Confidence 4466778888888765543
No 30
>d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]}
Probab=34.94 E-value=59 Score=29.23 Aligned_cols=102 Identities=12% Similarity=0.197 Sum_probs=70.8
Q ss_pred ccHHHHHHHHHHHHhhCCCCceEEeccc-----ccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHH
Q 017615 37 WGVERAVQIAYEARKQFPEEKIWITNEI-----IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEE 111 (368)
Q Consensus 37 ~GV~RAI~~a~~~~~~~~~~~Vy~lG~i-----IHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~ 111 (368)
.|.++|++...+++++ +++|.++|+- -=---..+-|++.|+.+---.+ +.+.+ -||++++.
T Consensus 8 ~~m~~A~~~i~~ai~~--~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip-----~R~~e-------GyGl~~~~ 73 (385)
T d1ir6a_ 8 KGLREAAALLEEALRQ--GKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIP-----HRLEE-------GYGVLMER 73 (385)
T ss_dssp TTHHHHHHHHHHHHHT--TCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECC-----CTTTS-------CSSCCGGG
T ss_pred cCHHHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHHHHHCCCCeEEECC-----Ccccc-------CCCcCHHH
Confidence 3789999999999886 4689999863 1112355788999987653221 11222 38999998
Q ss_pred HHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEEecCC
Q 017615 112 MVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYS 154 (368)
Q Consensus 112 ~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~ 154 (368)
.+++.+..--||-.-|+.. -+..+..+.+.|-.|||+=++.
T Consensus 74 i~~~~~~~~LiItvD~G~~--~~e~i~~~~~~gi~vIv~DHH~ 114 (385)
T d1ir6a_ 74 VPEHLEASDLFLTVDCGIT--NHAELRELLENGVEVIVTDHHT 114 (385)
T ss_dssp HHHHHTTCSEEEESSCCTT--CGGGHHHHTTSCCEEEEECCSC
T ss_pred HHHHhhcCCeEEEeccccc--chhhHhhHhhcCCceecccccc
Confidence 8888765545677888864 4456677778899999987654
No 31
>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}
Probab=34.22 E-value=99 Score=24.33 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=23.6
Q ss_pred ccCCCEE-EEcCCCCCHHHHHHH---HhcCCcEEeCcCchhHH
Q 017615 94 VNKGDVV-VLPAFGAAVEEMVTL---NNKNVQIVDTTCPWVSK 132 (368)
Q Consensus 94 l~~g~~V-IIrAHGv~~~~~~~l---~~~g~~iiDaTCP~V~k 132 (368)
+.++|.| +|+.-|-++++.+.+ +++|.++|==||..-..
T Consensus 77 ~~~~Dl~I~iS~sG~t~~~i~~~~~ak~~g~~iI~IT~~~~s~ 119 (186)
T d1m3sa_ 77 LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESS 119 (186)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CCCCCEEEEecCccchhhhHHHHHHHHHCCCCEEEEecCCCch
Confidence 4456764 688899998876554 35555555444443333
No 32
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.62 E-value=99 Score=23.62 Aligned_cols=94 Identities=10% Similarity=0.025 Sum_probs=62.0
Q ss_pred HHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHHHHHH--------
Q 017615 44 QIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL-------- 115 (368)
Q Consensus 44 ~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~~~~l-------- 115 (368)
.+|...++. +-.|+.+. +|+.-++.|.+.|.....+.. +.+..-| +|+-.=--++....-+
T Consensus 15 ~iA~~L~~~--g~~v~~~d---~~~~~~~~~~~~~~~~~~~~~-----e~~~~~d-iii~~v~~~~~~~~v~~~~~~~~~ 83 (162)
T d3cuma2 15 PMATNLLKA--GYLLNVFD---LVQSAVDGLVAAGASAARSAR-----DAVQGAD-VVISMLPASQHVEGLYLDDDGLLA 83 (162)
T ss_dssp HHHHHHHHT--TCEEEEEC---SSHHHHHHHHHTTCEECSSHH-----HHHTSCS-EEEECCSCHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHC--CCeEEEEE---Cchhhhhhhhhhhccccchhh-----hhccccC-eeeecccchhhHHHHHhccccccc
Confidence 356666664 34677775 899999999999998776431 2223334 4433333333333222
Q ss_pred -HhcCCcEEeCcCchhHHHHHHHHHHhhCCceEE
Q 017615 116 -NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSI 148 (368)
Q Consensus 116 -~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~II 148 (368)
..+|..+||.|=-....+++..+.+.++|...+
T Consensus 84 ~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~ 117 (162)
T d3cuma2 84 HIAPGTLVLECSTIAPTSARKIHAAARERGLAML 117 (162)
T ss_dssp HSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence 235788999888888899999999999886544
No 33
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=32.34 E-value=22 Score=27.53 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=28.2
Q ss_pred EEEEcCCCCCHHHHHHHHhcCCcEEeCcCchh
Q 017615 99 VVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWV 130 (368)
Q Consensus 99 ~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V 130 (368)
.+++.+-+..++..+.+++.|+.+|.-.|+.|
T Consensus 97 ~i~~q~G~~~~e~~~~a~~~Gi~vV~~~C~~i 128 (136)
T d1iuka_ 97 LVWLQSGIRHPEFEKALKEAGIPVVADRCLMV 128 (136)
T ss_dssp CEEECTTCCCHHHHHHHHHTTCCEEESCCHHH
T ss_pred eEEEecCccCHHHHHHHHHcCCEEEcCCccHH
Confidence 36677777899999999999999999999977
No 34
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=31.88 E-value=1.1e+02 Score=25.03 Aligned_cols=26 Identities=12% Similarity=-0.054 Sum_probs=20.1
Q ss_pred eEEecccccCHHHHHHHHhcCcEEec
Q 017615 58 IWITNEIIHNPTVNKRLEEMAVQNIP 83 (368)
Q Consensus 58 Vy~lG~iIHN~~Vv~~L~~~GV~~v~ 83 (368)
.|...---.|+.+.+-|+++|..++.
T Consensus 140 ~~rpp~G~~~~~~~~~l~~~Gy~~~~ 165 (235)
T d2j13a1 140 YVRPPRGVFSERTLALTKEMGYYNVF 165 (235)
T ss_dssp EECCGGGEECHHHHHHHHHTTCEEEC
T ss_pred cccCChhhhhhhhHHHHHHcCCeEee
Confidence 34443346799999999999999876
No 35
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]}
Probab=31.08 E-value=19 Score=31.91 Aligned_cols=91 Identities=9% Similarity=0.062 Sum_probs=51.8
Q ss_pred cccHHHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHHHHHH
Q 017615 36 CWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 115 (368)
Q Consensus 36 C~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~~~~l 115 (368)
++.+.-+.+.+++++++.+..++-+..+--.+|.-++.|.+.=...+.... .+-.+++.+|++|||+|....
T Consensus 118 ~~T~~s~~~~~~~~~~~~~~~~~~~I~~~~~~p~yi~a~a~~I~~~~~~~~-----~~~~~~~~llfS~HgiP~~~~--- 189 (309)
T d2hk6a1 118 TFSVQSYNKRAKEEAEKLGGLTITSVESWYDEPKFVTYWVDRVKETYASMP-----EDERENAMLIVSAHSLPEKIK--- 189 (309)
T ss_dssp TTTHHHHHHHHHHHHHHHCSCEEEECCCCTTCHHHHHHHHHHHHHHHHHSC-----HHHHTSEEEEEEEECCBGGGG---
T ss_pred cccchhHHHHHHHHHhhccCCceEEecccCCChhHHHHHHHHHHHHHHhCc-----hhhcCcceEeecccccchhhh---
Confidence 444555667777766654344677778888888888777543111111000 000134579999999997643
Q ss_pred HhcCCcEEeCcCchhHHHHHHHHHHhh
Q 017615 116 NNKNVQIVDTTCPWVSKVWTSVEKHKK 142 (368)
Q Consensus 116 ~~~g~~iiDaTCP~V~kv~~~v~~~~~ 142 (368)
++| =||-.-+++.++..++
T Consensus 190 -~~g-------dpY~~~~~~t~~~i~~ 208 (309)
T d2hk6a1 190 -EFG-------DPYPDQLHESAKLIAE 208 (309)
T ss_dssp -GGT-------CCHHHHHHHHHHHHHH
T ss_pred -hcC-------CchHHHHHHHHHHHHH
Confidence 222 1555555555555544
No 36
>d1nrza_ c.38.1.1 (A:) Sorbose permease subunit IIb , EIIb-sor {Klebsiella pneumoniae [TaxId: 573]}
Probab=28.93 E-value=46 Score=26.76 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=54.0
Q ss_pred eCCCC---CcccHHHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCc-cccccccccCCCEEEEcCC
Q 017615 30 AESYG---FCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEE-GKKQFDVVNKGDVVVLPAF 105 (368)
Q Consensus 30 A~~~G---FC~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~-~~~~l~el~~g~~VIIrAH 105 (368)
|.|.| ..+.|+.|++...+...+ +.+++++ +=||.-..+|-+.|+.+- ..+ | .+.. .+|...+-++=
T Consensus 50 A~P~gvk~~i~sve~a~~~l~~~~~~--~~~v~il---~~~~~d~~~l~~~g~~i~-~lNvG--~~~~-~~g~~~i~~~v 120 (163)
T d1nrza_ 50 AAPPGMKVNVVSLEKAVAVYHNPQYQ--DETVFYL---FTNPHDVLTMVRQGVQIA-TLNIG--GMAW-RPGKKQLTKAV 120 (163)
T ss_dssp TCCTTCEEEEECHHHHHHHHTCGGGT--TCEEEEE---ESSHHHHHHHHTTTCCCS-EEEEE--EBCC-CTTCEEEETTE
T ss_pred hCCCCCEEEEEeHHHHHHHHhcCccc--CceEEEE---ECCHHHHHHHHHcCCCCC-EEEEC--CCCC-CCCCEEEecce
Confidence 44555 457889998887664432 4678885 789999999999998752 221 1 1111 25778888888
Q ss_pred CCCHHHHHHHH
Q 017615 106 GAAVEEMVTLN 116 (368)
Q Consensus 106 Gv~~~~~~~l~ 116 (368)
-++++..+.++
T Consensus 121 ~l~~ee~~~lk 131 (163)
T d1nrza_ 121 SLDPQDIQAFR 131 (163)
T ss_dssp EECHHHHHHHH
T ss_pred eeCHHHHHHHH
Confidence 89999887763
No 37
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]}
Probab=28.82 E-value=1.3e+02 Score=24.80 Aligned_cols=45 Identities=9% Similarity=0.187 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhC-C-CCceEE-ecccccCHHHHHHHHhcCcEEec
Q 017615 39 VERAVQIAYEARKQF-P-EEKIWI-TNEIIHNPTVNKRLEEMAVQNIP 83 (368)
Q Consensus 39 V~RAI~~a~~~~~~~-~-~~~Vy~-lG~iIHN~~Vv~~L~~~GV~~v~ 83 (368)
++.-|..+++.+++. + ....|. .---..|+.+.+.|+++|.+++.
T Consensus 116 ~~~ei~~~~~~i~~~~G~~~~~~~RpP~g~~~~~~~~~l~~~Gy~~v~ 163 (235)
T d1ny1a_ 116 IQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVF 163 (235)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCEECCGGGEECHHHHHHHHHTTCEEBC
T ss_pred HHHHHHHHHHHHHHHhhccccccccCCCcccchhHHHHHHHcCCeEEE
Confidence 444455555554432 1 123444 44456899999999999999886
No 38
>d2iw0a1 c.6.2.3 (A:29-248) Chitin deacetylase {Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]}
Probab=28.12 E-value=69 Score=25.98 Aligned_cols=27 Identities=11% Similarity=0.037 Sum_probs=22.2
Q ss_pred ceEEecccccCHHHHHHHHhcCcEEec
Q 017615 57 KIWITNEIIHNPTVNKRLEEMAVQNIP 83 (368)
Q Consensus 57 ~Vy~lG~iIHN~~Vv~~L~~~GV~~v~ 83 (368)
+.|-.--.-.|+.+.+.|+++|..++.
T Consensus 111 ~~fR~P~g~~~~~~~~~l~~~G~~~v~ 137 (220)
T d2iw0a1 111 KYMRAPYLSCDAGCQGDLGGLGYHIID 137 (220)
T ss_dssp SEECCGGGCCCHHHHHHHHHTTCEEEC
T ss_pred ccccChhHHHhHHHHHHHHhcCCEEEe
Confidence 356556667899999999999999875
No 39
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=27.65 E-value=1.1e+02 Score=22.37 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=22.0
Q ss_pred CCcEEEEeecCCCcHHHHHHHHHHHHhhhhh
Q 017615 332 GQITIGITSGASTPDKAVEDVLKKVFEIKRE 362 (368)
Q Consensus 332 ~~~~VGITAGASTP~~lI~eVi~~l~~~~~~ 362 (368)
+.+.+..-.|..+++.+-+++.+.|+++..+
T Consensus 104 ~G~i~~~~~G~~~~~~l~~~i~~ll~kl~~e 134 (136)
T d1z5ye1 104 NGIIRYRHAGDLNPRVWEEEIKPLWEKYSKE 134 (136)
T ss_dssp TSCEEEEEESCCCHHHHHHHTHHHHHHHHHT
T ss_pred CCEEEEEEEcCCCHHHHHHHHHHHHHHHHHh
Confidence 3455666788888888777777777766544
No 40
>d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=27.61 E-value=33 Score=26.44 Aligned_cols=64 Identities=11% Similarity=0.181 Sum_probs=41.1
Q ss_pred CceEEecccccCHHHHHHHHhcCcEEecCCcc---ccc-cccccCCCEEEEcCC-CCCHHHHHHHHhcCCcEE
Q 017615 56 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG---KKQ-FDVVNKGDVVVLPAF-GAAVEEMVTLNNKNVQIV 123 (368)
Q Consensus 56 ~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~---~~~-l~el~~g~~VIIrAH-Gv~~~~~~~l~~~g~~ii 123 (368)
-+|.++.++ +|..++.|++.|...+...++ .++ ++.+.+-+.+++|.. .+++++++.+ .++++|
T Consensus 5 mKILv~d~i--~~~a~~~L~~~g~~~v~~~~~~~~~~~l~~~~~~~d~ii~~~~~~i~~~~i~~~--p~Lk~I 73 (132)
T d1sc6a2 5 IKFLLVEGV--HQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA--EKLVAI 73 (132)
T ss_dssp CCEEECSCC--CHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC--SSCCEE
T ss_pred CEEEEECCC--CHHHHHHHHhCCCEEEEeCCCCCCHHHHHHhhcCCcEEEEecccccChhhhhcc--ccceeE
Confidence 368899887 677889999999665532111 111 123344456778765 5899998865 467766
No 41
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.92 E-value=1.1e+02 Score=23.70 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHH-HHHHHhc
Q 017615 40 ERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEE-MVTLNNK 118 (368)
Q Consensus 40 ~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~-~~~l~~~ 118 (368)
+++++.+.+.-. -..|++.. .++...+..+..|+.++.... ++..+. ...-++ .+.++..
T Consensus 32 ~~~i~~~~ks~~---id~Iivst---d~~~i~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~i~~~~~~~ 92 (228)
T d1qwja_ 32 GWVLRAALDAGV---FQSVWVST---DHDEIENVAKQFGAQVHRRSS------ETSKDS-------STSLDAIVEFLNYH 92 (228)
T ss_dssp HHHHHHHHHHTC---CSEEEEEE---SCHHHHHHHHHTTCEEEECCG------GGSSTT-------CCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCC---cceEEEec---chhhhhhhhhhcCcccccccc------cccccc-------chhhhhhhhccccc
Confidence 345555443322 13588876 488888888999998876431 222221 112233 3333222
Q ss_pred ----CCcEEeCcCch--hHHHHHHHHHHhhCCceEEEEecCCCc
Q 017615 119 ----NVQIVDTTCPW--VSKVWTSVEKHKKGDYTSIIHGKYSHE 156 (368)
Q Consensus 119 ----g~~iiDaTCP~--V~kv~~~v~~~~~~Gy~IIIiG~~~Hp 156 (368)
.+.++.+|||+ ..-+.+.+..+.+.++..++.....|+
T Consensus 93 ~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~~~~~~~ 136 (228)
T d1qwja_ 93 NEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQ 136 (228)
T ss_dssp TTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECC
T ss_pred cccceeeeecccccccCchhhhhhhhhhhccCcccccccccccc
Confidence 24447899998 457888888888899988776555544
No 42
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=26.77 E-value=51 Score=26.09 Aligned_cols=58 Identities=10% Similarity=0.091 Sum_probs=46.4
Q ss_pred CEEEEcCCCCCHHHHHHHHhcCC---cEEeCcCchhHHHHHHHHHHhhCCceEEEEecCCC
Q 017615 98 DVVVLPAFGAAVEEMVTLNNKNV---QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSH 155 (368)
Q Consensus 98 ~~VIIrAHGv~~~~~~~l~~~g~---~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~~H 155 (368)
.++||-|=|+++.+...+.+.|. .|++-|-....++...++++.......+-+.+-.+
T Consensus 20 ~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (182)
T d1vi2a1 20 TMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD 80 (182)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC
T ss_pred EEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc
Confidence 57899999999999999998885 57999999999999999988776555444444433
No 43
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.08 E-value=1.1e+02 Score=21.95 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHHHHHhhhccccccccc-ccccCcccHHHHHHHHHHHHhhhhcCCEEEEe-------hhhhccC
Q 017615 229 LKGETEEIGKLVEKTMMRKFGVENVNEH-FISFNTICDATQERQDAMYKMVEEKVDLILVV-------EIAEDRG 295 (368)
Q Consensus 229 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~-~~~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV-------eia~~~~ 295 (368)
+.++|++......+ . ...- +.++.+.|..=+.=...+.+|+..--|+.++- ++|++.+
T Consensus 13 s~~~~~~~~~~~~~----~-----~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~vd~~~~~~l~~~~~ 78 (114)
T d1xfla_ 13 TVETWNEQLQKANE----S-----KTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWA 78 (114)
T ss_dssp SHHHHHHHHHHHHH----T-----TCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTT
T ss_pred CHHHHHHHHHHhhc----c-----CCeEEEEEEcCCCCCccccccchhhhcccccccceeEEEeeeceeeccccc
Confidence 56677766554432 1 0111 33789999988877788888874333554333 7887765
No 44
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=26.06 E-value=25 Score=28.76 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=37.1
Q ss_pred ccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhh
Q 017615 63 EIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKK 142 (368)
Q Consensus 63 ~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~ 142 (368)
++-|-....+.|++.||.+- .-|++||-.|..+++.+ +++.+
T Consensus 13 D~~~~~~a~~~L~~~gI~~e----------------~~v~SAHRtp~~l~~~~----------------------~~~~~ 54 (163)
T d1qcza_ 13 DWATMQFAAEIFEILNVPHH----------------VEVVSAHRTPDKLFSFA----------------------ESAEE 54 (163)
T ss_dssp GHHHHHHHHHHHHHHTCCEE----------------EEECCTTTCHHHHHHHH----------------------HHTTT
T ss_pred hHHHHHHHHHHHHHcCCCeE----------------EEEeccccCHHHHHHHH----------------------HHHHH
Confidence 34455566677888887643 46899999988777766 45667
Q ss_pred CCceEEEEe
Q 017615 143 GDYTSIIHG 151 (368)
Q Consensus 143 ~Gy~IIIiG 151 (368)
+|+.|+|.|
T Consensus 55 ~~~~ViIa~ 63 (163)
T d1qcza_ 55 NGYQVIIAG 63 (163)
T ss_dssp TTCSEEEEE
T ss_pred cCCeEEEEe
Confidence 899988877
No 45
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.99 E-value=15 Score=28.68 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=26.8
Q ss_pred EeCcCchhHHHHHHHHHHhhCCceEEEEecC
Q 017615 123 VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKY 153 (368)
Q Consensus 123 iDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~ 153 (368)
.|-.|||=++.|...+++.+++..++++--+
T Consensus 34 sD~~CpyC~~~~~~l~~~~~~~~~~~~~~~p 64 (156)
T d1eeja1 34 TDITCGYCHKLHEQMADYNALGITVRYLAFP 64 (156)
T ss_dssp ECTTCHHHHHHHTTHHHHHHTTEEEEEEECC
T ss_pred eCCCCHHHHHHHHHHHHhhccCceEEEEecc
Confidence 6999999999999999999888887776543
No 46
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]}
Probab=25.36 E-value=1.5e+02 Score=23.39 Aligned_cols=102 Identities=7% Similarity=0.015 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhhCCC-C-ceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHHHHHHH
Q 017615 39 VERAVQIAYEARKQFPE-E-KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 116 (368)
Q Consensus 39 V~RAI~~a~~~~~~~~~-~-~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~~~~l~ 116 (368)
++.=|..+.+++++..+ . +.|-.--.-.|+.+.+-|++.|.+++.-.-+..|+.. .-+..+.+.+.
T Consensus 77 ~~~ei~~~~~~i~~~~g~~~~~fR~P~g~~~~~~~~~l~~~G~~~v~w~vd~~Dw~~------------~~~~~i~~~v~ 144 (192)
T d2cc0a1 77 MDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNN------------ASTDAIVQAVS 144 (192)
T ss_dssp HHHHHHHHHHHHHHTTSCCCSEECCGGGCCCHHHHHHHHHTTCEECCCSEECCGGGT------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCchhhhhhhHHHHHHHcCCccccCCCCcccccc------------CCHHHHHHHHh
Confidence 44555556666654222 2 3444444567999999999999998852100011110 11122222221
Q ss_pred h--cCCcEE--eCcCchhHHHHHHHHHHhhCCceEEEEec
Q 017615 117 N--KNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGK 152 (368)
Q Consensus 117 ~--~g~~ii--DaTCP~V~kv~~~v~~~~~~Gy~IIIiG~ 152 (368)
+ .|-.|+ |.----+.-+-..+..+.++||+.+-+..
T Consensus 145 ~~~~G~IiL~Hd~~~~t~~aL~~ii~~lk~~Gy~fvtlse 184 (192)
T d2cc0a1 145 RLGNGQVILMHDWPANTLAAIPRIAQTLAGKGLCSGMISP 184 (192)
T ss_dssp TCCTTCEEEEESSCHHHHHHHHHHHHHHHHTTEEECEECT
T ss_pred ccCCCeEEEEeCCchhHHHHHHHHHHHHHHCCCEEEEccc
Confidence 1 222221 32111244566778888899999887763
No 47
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=24.76 E-value=52 Score=27.79 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=36.7
Q ss_pred EEEEcCCCCC----HHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEE
Q 017615 99 VVVLPAFGAA----VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIH 150 (368)
Q Consensus 99 ~VIIrAHGv~----~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIi 150 (368)
.||+..++-. ++..+.|++.|+++-=...-+-.-..+.++++.++||.+|++
T Consensus 4 l~i~N~~s~~~~~~~~~~~~l~~~g~~~~v~~T~~~g~a~~~~~~~~~~~~d~Ivv 59 (295)
T d2bona1 4 LLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIA 59 (295)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEE
T ss_pred EEEECCCCCCchHHHHHHHHHHHCCCEEEEEEcCCcchHHHHHHHHHhcCCCEEEE
Confidence 3556666665 566778899999883333344556788899999999986666
No 48
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=24.03 E-value=22 Score=27.58 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=28.3
Q ss_pred EEeCcCchhHHHHHHHHHHhhCCceEEEEecC
Q 017615 122 IVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKY 153 (368)
Q Consensus 122 iiDaTCP~V~kv~~~v~~~~~~Gy~IIIiG~~ 153 (368)
..|=.|||=++.|...+++.+.+..++++..+
T Consensus 33 FsD~~CPyC~~~~~~l~~l~~~~~~v~~~~~~ 64 (150)
T d1t3ba1 33 FMDITCHYCHLLHQQLKEYNDLGITVRYLAFP 64 (150)
T ss_dssp EECTTCHHHHHHHTTHHHHHHTTEEEEEEECC
T ss_pred EECCCCHHHHHHhHHHHHHhccCceEEEEEec
Confidence 36999999999999999999999888888654
No 49
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.76 E-value=72 Score=26.46 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=47.3
Q ss_pred ccccccCcccHHHHHHHHHHHHhhhhcCCEEEEe-------------hhhhccCCCeEEeCCCCCcCCCCcchhhhccch
Q 017615 255 EHFISFNTICDATQERQDAMYKMVEEKVDLILVV-------------EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 321 (368)
Q Consensus 255 ~~~~~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV-------------eia~~~~~~t~~Ie~~~eL~~~~~~~~~~~~~~ 321 (368)
+++..|+.--+. .+...+.+.+ .++|++||| ..+++.|.+.+.|.-.. -.
T Consensus 160 P~vv~fgE~~~~--~~~~~~~~~~-~~~dl~LviGTSl~V~p~~~~~~~a~~~~~~~i~IN~~~-~~------------- 222 (252)
T d1ma3a_ 160 PRVVLFGEPLPQ--RTLFEAIEEA-KHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEP-TM------------- 222 (252)
T ss_dssp EEECCBTSBCCH--HHHHHHHHHH-HHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSC-CT-------------
T ss_pred CeEEECCCcCch--HHHHHHHHHh-hCCCeEEEecCCceeeechHHHHHHHHcCCeEEEECCCC-CC-------------
Confidence 455555554432 3444455555 589999999 77778887777775322 11
Q ss_pred hhhhcccccCCCcEEEEeecCCCcHHHHHHHHHHHHhhhh
Q 017615 322 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 361 (368)
Q Consensus 322 ~~~~~~~l~~~~~~VGITAGASTP~~lI~eVi~~l~~~~~ 361 (368)
+ .....+-|. ...+.++.++++.|++++.
T Consensus 223 -------~-d~~~d~~i~---g~~~evl~~l~~~l~~l~~ 251 (252)
T d1ma3a_ 223 -------A-DPIFDVKII---GKAGEVLPKIVEEVKRLRS 251 (252)
T ss_dssp -------T-GGGCSEEEE---SCHHHHHHHHHHHHHHHTC
T ss_pred -------C-CCceeEEEE---CCHHHHHHHHHHHHHHHhc
Confidence 1 111224444 3356788888888888765
No 50
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.35 E-value=1.3e+02 Score=22.74 Aligned_cols=65 Identities=15% Similarity=0.057 Sum_probs=42.5
Q ss_pred HHHHHHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHHHHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceE
Q 017615 68 PTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTS 147 (368)
Q Consensus 68 ~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~I 147 (368)
++.++.|+++|+.+.- + .||. .......+++.|+.-+=+-|+--.|.+. ++++ +.|+.+
T Consensus 27 ~~~I~~L~~~Gi~v~i----------l-TGD~--------~~~a~~ia~~lgI~~v~~~~~p~~k~~~-v~~~-q~~~~v 85 (135)
T d2b8ea1 27 KPAVQELKRMGIKVGM----------I-TGDN--------WRSAEAISRELNLDLVIAEVLPHQKSEE-VKKL-QAKEVV 85 (135)
T ss_dssp HHHHHHHHHTTCEEEE----------E-CSSC--------HHHHHHHHHHHTCSEEECSCCHHHHHHH-HHHH-TTTSCE
T ss_pred HHHHHHHHHcCCEEEE----------E-cCcc--------hhhhhHHHhhhhhhhhccccchhHHHHH-HHHH-HcCCEE
Confidence 4578899999987652 1 2331 2344455577888888788887777653 4444 446688
Q ss_pred EEEecC
Q 017615 148 IIHGKY 153 (368)
Q Consensus 148 IIiG~~ 153 (368)
..+|+-
T Consensus 86 ~~vGDg 91 (135)
T d2b8ea1 86 AFVGDG 91 (135)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 888864
No 51
>d2fvya1 c.93.1.1 (A:2-306) Galactose/glucose-binding protein {Escherichia coli [TaxId: 562]}
Probab=23.16 E-value=1.7e+02 Score=23.33 Aligned_cols=81 Identities=11% Similarity=0.230 Sum_probs=49.4
Q ss_pred ceeEEEEcCCCChHHHHHHHHHHHHHHhhhcccccccccccccCcccHHHHHHHHHHHHhhhhcCCEEEEe---------
Q 017615 218 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV--------- 288 (368)
Q Consensus 218 ~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~nTIC~AT~~RQ~a~~eLa~~~vD~miVV--------- 288 (368)
.||||+..+ .+-.-|..+.+-+++...+. ...++.+.++=.+...+.+. +..|.+..+|.+|+.
T Consensus 2 ~kIgv~~~~-~~~~f~~~i~~gi~~~a~~~-----~~~~l~~~~~~~~~~~q~~~-i~~li~~~vDgiii~~~~~~~~~~ 74 (305)
T d2fvya1 2 TRIGVTIYK-YDDNFMSVVRKAIEQDAKAA-----PDVQLLMNDSQNDQSKQNDQ-IDVLLAKGVKALAINLVDPAAAGT 74 (305)
T ss_dssp EEEEEEESC-TTSHHHHHHHHHHHHHHHTC-----TTEEEEEEECTTCHHHHHHH-HHHHHHTTCSEEEECCSSGGGHHH
T ss_pred cEEEEEeCC-CCCHHHHHHHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHH-HHHHHHcCCCEEEeecccccccHH
Confidence 378987744 45566778888777532211 12345555544444444433 444444789999997
Q ss_pred --hhhhccCCCeEEeCCCC
Q 017615 289 --EIAEDRGIPSYWIDSEK 305 (368)
Q Consensus 289 --eia~~~~~~t~~Ie~~~ 305 (368)
+-+.+.+.|...+.+.-
T Consensus 75 ~~~~~~~~~ipvv~~~~~~ 93 (305)
T d2fvya1 75 VIEKARGQNVPVVFFNKEP 93 (305)
T ss_dssp HHHHHHTTTCCEEEESSCC
T ss_pred HHHHHHhcCCceeeeeecc
Confidence 55667788888887643
No 52
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=23.13 E-value=51 Score=25.30 Aligned_cols=55 Identities=22% Similarity=0.224 Sum_probs=34.3
Q ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHHhhCCCCceEEecccccC------------HHHHHHHHhcCcEE
Q 017615 24 NVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHN------------PTVNKRLEEMAVQN 81 (368)
Q Consensus 24 ~mkI~lA~~~GFC~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN------------~~Vv~~L~~~GV~~ 81 (368)
.|||.+-.-.= |--.|++.+.+.+++.+-..|+.+|++++- +.+++.|.+.+..+
T Consensus 1 mMki~iiSDiH---g~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (184)
T d1su1a_ 1 MMKLMFASDIH---GSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKV 67 (184)
T ss_dssp CCEEEEECCCT---TBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGE
T ss_pred CcEEEEEeecC---CCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCCcE
Confidence 36765532221 445667776665543223479999999974 47888888776544
No 53
>d1pzxa_ c.119.1.1 (A:) Hypothetical protein apc36103 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.71 E-value=1.1e+02 Score=26.22 Aligned_cols=70 Identities=10% Similarity=-0.011 Sum_probs=47.0
Q ss_pred HHHHhcCcEEecCCccccccccccCCCEEEEcCCCCCHH-HHHHHHhcCCcEEeCcCchhHHHHHHHHHHhhCCceEEEE
Q 017615 72 KRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVE-EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIH 150 (368)
Q Consensus 72 ~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrAHGv~~~-~~~~l~~~g~~iiDaTCP~V~kv~~~v~~~~~~Gy~IIIi 150 (368)
+.+++.||.++.= .-. -|+..-.=-=.++++ .|+.+++ |-. .=+.||-+....+..+++.++|+.||.+
T Consensus 16 ~~~~~~~I~vvPl-------~i~-~~~~~y~D~~dis~eefy~~l~~-~~~-~~TS~ps~~~~~~~~~~~~~~~~~vi~i 85 (287)
T d1pzxa_ 16 SYIREHRIAFLPL-------VVH-WNGQDYKDGITIEPKQVYDAMRQ-GHT-VKTAQPSPLAMKELFLPYAKENRPCLYI 85 (287)
T ss_dssp HHHHHTTCEEECC-------EEE-ETTEEEEBTTTBCHHHHHHHHTT-TCC-CEEECCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCcEEEEE-------EEE-ECCEEEEcCCCCCHHHHHHHHhc-CCC-CccCCCCHHHHHHHHHHHHhCCCcEEEE
Confidence 3456678888741 111 123333322234555 6887754 544 5799999999999999999999999988
Q ss_pred e
Q 017615 151 G 151 (368)
Q Consensus 151 G 151 (368)
.
T Consensus 86 ~ 86 (287)
T d1pzxa_ 86 A 86 (287)
T ss_dssp E
T ss_pred E
Confidence 7
No 54
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=22.29 E-value=34 Score=23.35 Aligned_cols=72 Identities=17% Similarity=0.225 Sum_probs=46.9
Q ss_pred eEEEEeCCCCCcccHHHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcEEecCCccccccccccCCCEEEEcC
Q 017615 25 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 104 (368)
Q Consensus 25 mkI~lA~~~GFC~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~~v~~~~~~~~l~el~~g~~VIIrA 104 (368)
.+|+-....+||.-+++-++ +. +--|..-++-.|+...+.|+..|...+.- +--|+.+|.
T Consensus 3 i~iYs~~~C~~C~~ak~~L~-------~~--~i~y~~~~i~~~~~~~~~~~~~g~~tvP~---------i~i~~~~i~-- 62 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAME-------NR--GFDFEMINVDRVPEAAEALRAQGFRQLPV---------VIAGDLSWS-- 62 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HT--TCCCEEEETTTCHHHHHHHHHTTCCSSCE---------EEETTEEEE--
T ss_pred EEEEeCCCCccHHHHHHHHH-------hc--CceeEEEeecCCHHHHHHHHhcCCCCCCE---------EEECCEEEE--
Confidence 34555688899977766543 22 22477778888999999999999765531 111344543
Q ss_pred CCCCHHHHHHHHh
Q 017615 105 FGAAVEEMVTLNN 117 (368)
Q Consensus 105 HGv~~~~~~~l~~ 117 (368)
|-.|+..++|++
T Consensus 63 -Gf~~d~i~~L~~ 74 (76)
T d1h75a_ 63 -GFRPDMINRLHP 74 (76)
T ss_dssp -SCCHHHHGGGSC
T ss_pred -CCCHHHHHHHhc
Confidence 777887776643
No 55
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=22.21 E-value=1.7e+02 Score=23.01 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=65.3
Q ss_pred ceeEEEEcCCCChHHHHHHHHHHHHHHhhhcccccccccccccCcccHHHHHHHHHH-HHhhhhcCCEEEEe--------
Q 017615 218 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAM-YKMVEEKVDLILVV-------- 288 (368)
Q Consensus 218 ~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~nTIC~AT~~RQ~a~-~eLa~~~vD~miVV-------- 288 (368)
+-|||+..+ ++..-|..+++-+.+.+.+. + -++.++++ .--.++|.++ ..+....+|.+|+.
T Consensus 4 ~tIgvvvp~-l~~~f~~~~~~gi~~~~~~~-g-----~~~~~~~~--~~~~~~e~~~i~~~~~~~vdgii~~~~~~~~~~ 74 (275)
T d2nzug1 4 TTVGVIIPD-ISNIFYAELARGIEDIATMY-K-----YNIILSNS--DQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEH 74 (275)
T ss_dssp SEEEEEESC-TTSHHHHHHHHHHHHHHHHT-T-----CEEEEEEC--TTCHHHHHHHHHHHHTTCCSEEEECCSCCCHHH
T ss_pred CEEEEECCC-CCCHHHHHHHHHHHHHHHHc-C-----CEEEEEEC--CCCHHHHHHHHHHHHhcCCceeeccccchhhHH
Confidence 468988754 44556777877777654432 2 12222221 2223444433 34444689999988
Q ss_pred -hhhhccCCCeEEeCCCCCcCCCCcchhhh-ccchhhhhcccccCCCcEEEEeecCCCcHH
Q 017615 289 -EIAEDRGIPSYWIDSEKRIGPGNKIAYKL-MHGELVEKENWLPKGQITIGITSGASTPDK 347 (368)
Q Consensus 289 -eia~~~~~~t~~Ie~~~eL~~~~~~~~~~-~~~~~~~~~~~l~~~~~~VGITAGASTP~~ 347 (368)
+..++.+.|..++.+..+-.....+.--- ..+.. -....+..|+++||+.+|......
T Consensus 75 ~~~l~~~~~pvv~~~~~~~~~~~~~V~~d~~~~~~~-~~~~l~~~G~~~i~~~~~~~~~~~ 134 (275)
T d2nzug1 75 VEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFD-AVQSLIDSGHKNIAFVSGTLEEPI 134 (275)
T ss_dssp HHHHHHCSSCEEEESCCCTTCCSCEEEECHHHHHHH-HHHHHHHTTCSCEEEEESCTTSHH
T ss_pred HHHHhhccccccccccccccccccccccccccchhH-HHHHHHHhcccceEEEecCcccch
Confidence 55557788999998765543311110000 00111 111223358999999998765543
No 56
>d1lxja_ d.58.48.1 (A:) Hypothetical protein YB1001C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.62 E-value=31 Score=26.11 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=37.5
Q ss_pred ccccchHHHHHHhcCCcceecceEEEEeCCCCCcccHHHHHHHHHHHHhhCCCCceEEe
Q 017615 3 QEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWIT 61 (368)
Q Consensus 3 ~~y~~~~~~~~~~~~~~~~~g~mkI~lA~~~GFC~GV~RAI~~a~~~~~~~~~~~Vy~l 61 (368)
|.|=.++++.|++.|..+..|.|.=.+-...-=+| .+++.+.+++-+.+-++||+.
T Consensus 23 s~yVa~~i~~i~~sGl~y~~~pmgT~IEG~~del~---~~v~~~he~~~~~G~~RV~t~ 78 (104)
T d1lxja_ 23 SDFVALIEKKIRESPLKSTLHSAGTTIEGPWDDVM---GLIGEIHEYGHEKGYVRVHTD 78 (104)
T ss_dssp HHHHHHHHHHHHTSSSEEEEETTEEEEEEEHHHHH---HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEecCCcceEECCHHHHH---HHHHHHHHHHHHcCCCeEEEE
Confidence 46888999999999999999998544433333233 445556566644434578775
No 57
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=21.03 E-value=1.3e+02 Score=20.98 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=41.2
Q ss_pred chHHHHHHhcCCcceecceEEEEeCCCCCcccHHHHHHHHHHHHhhCCCCceEEecccccCHHHHHHHHhcCcE
Q 017615 7 SDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ 80 (368)
Q Consensus 7 ~~~~~~~~~~~~~~~~g~mkI~lA~~~GFC~GV~RAI~~a~~~~~~~~~~~Vy~lG~iIHN~~Vv~~L~~~GV~ 80 (368)
.++++++++...+.. +.++.+...|+|--+..+++. ....++ .-.+..=+.=-|++..+++.=+|+-
T Consensus 4 ~~~~e~ik~l~~~~~---i~~F~s~~C~~C~~~~p~~~~---~a~~~~-~i~~~~vd~~~~~~l~~~~~I~~vP 70 (96)
T d1hyua4 4 QSLLEQIRDIDGDFE---FETYYSLSCHNCPDVVQALNL---MAVLNP-RIKHTAIDGGTFQNEITERNVMGVP 70 (96)
T ss_dssp HHHHHHHHHCCSCEE---EEEEECTTCSSHHHHHHHHHH---HHHHCT-TEEEEEEETTTCHHHHHHTTCCSSS
T ss_pred HHHHHHHHhcCCCeE---EEEEECCCCcchHHHHHHHHH---HHHhCC-ceEEEEEecccchHHHhhccccccc
Confidence 367888988764443 456779999999766665553 334443 2234444566778777766444443
No 58
>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=20.16 E-value=76 Score=24.13 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=33.9
Q ss_pred hhhccCCCeEEeCCCCCcCCCCcchhhhccchhhhhcccccCCCcEEEEeecCCCcHHHHHHHHHHHHh
Q 017615 290 IAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 358 (368)
Q Consensus 290 ia~~~~~~t~~Ie~~~eL~~~~~~~~~~~~~~~~~~~~~l~~~~~~VGITAGASTP~~lI~eVi~~l~~ 358 (368)
..+..+.+++++.+..++.. .+......|=|+.||-.=..+..+.++.+++
T Consensus 99 ~i~~~~~~~~~i~~~~~l~~------------------~l~~~~~divl~~GaGdi~~~~~~~~e~~q~ 149 (151)
T d1j6ua2 99 SLKSLGKEAYFVEKLPELEK------------------VISVSENTVFLFVGAGDIIYSSRRFVERYQS 149 (151)
T ss_dssp HHHHTTCCEEECCSGGGHHH------------------HCCCCSSEEEEEECSSTHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEEcCCHHHHHH------------------HHhCCCCCEEEEEcCCCHHHHHHHHHHHHHh
Confidence 33466778888888777643 2212345677889998767777777776654
Done!