Query 017616
Match_columns 368
No_of_seqs 242 out of 1490
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 17:19:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017616.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017616hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ku2a2 a.177.1.1 (A:93-272) S 100.0 1.5E-34 1.1E-38 254.5 10.6 147 218-367 1-177 (180)
2 d1siga_ a.177.1.1 (A:) Sigma70 99.9 2.5E-25 1.8E-29 209.2 14.7 90 278-367 238-334 (334)
3 d1rp3a3 a.177.1.1 (A:0-86) Sig 99.9 1.2E-22 8.7E-27 162.1 9.1 73 295-367 10-85 (87)
4 d1or7a2 a.177.1.1 (A:-1-111) S 98.8 5.5E-09 4E-13 83.3 7.0 83 282-367 8-91 (113)
5 d1h3la_ a.177.1.1 (A:) Sigma f 97.2 0.00018 1.3E-08 52.9 5.0 69 295-365 7-75 (75)
6 d1l0oc_ a.4.13.2 (C:) SigmaF { 96.5 0.0026 1.9E-07 45.4 5.9 41 253-293 15-55 (57)
7 d1rp3a1 a.4.13.1 (A:87-163) Si 95.7 0.0092 6.7E-07 44.1 6.0 40 252-291 9-48 (77)
8 d1ku2a1 a.4.13.1 (A:273-332) S 93.5 0.064 4.7E-06 38.4 5.5 41 251-291 10-52 (60)
9 d1bl0a1 a.4.1.8 (A:9-62) MarA 71.9 2.7 0.0002 27.9 4.6 39 253-291 3-41 (54)
10 d1d5ya1 a.4.1.8 (A:3-56) Rob t 39.9 13 0.00092 24.4 3.5 37 255-291 5-41 (54)
11 d1jhfa1 a.4.5.2 (A:2-72) LexA 29.7 62 0.0045 22.4 6.1 21 265-285 20-41 (71)
12 d2ofya1 a.35.1.3 (A:3-84) Puta 29.4 44 0.0032 23.9 5.3 48 271-327 27-74 (82)
13 d1lvaa3 a.4.5.35 (A:511-574) C 28.9 71 0.0051 21.7 6.2 33 258-290 12-44 (64)
No 1
>d1ku2a2 a.177.1.1 (A:93-272) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=100.00 E-value=1.5e-34 Score=254.48 Aligned_cols=147 Identities=24% Similarity=0.388 Sum_probs=115.0
Q ss_pred CCchHHHHHHHhhccCCCCCCcHHHHHHHhhchHHHHHHHHHHHHH------------------HHhCCCCchhHHHHHc
Q 017616 218 KQPTIFSAERALNSRGRRLTIARNEAEMSKGVQVVANLERIKTTLE------------------KESGKAASLNCWAQAA 279 (368)
Q Consensus 218 ~~~~~~~v~~~~~~~~~~LLtaeEE~eL~~~Iq~~~~Le~ir~~L~------------------~~~gr~pt~~ewA~a~ 279 (368)
+||++.|+++ .+..||||++||++|+++|+.+..+.+...+.. ...+..|...+|....
T Consensus 1 tDpVr~YLre---ig~v~LLT~EEEieLAr~Ie~g~~~~~~~~e~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~e~~~~~ 77 (180)
T d1ku2a2 1 SDPVRQYLHE---IGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQKIPGLKEKPDPK 77 (180)
T ss_dssp CHHHHHHHHH---HTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCSSCCCTTSCCSSCTT
T ss_pred CCcHHHHHHH---hcCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHhhhHHHHhcchhhHHHhhHH
Confidence 3566555542 344699999999999999998877554432221 0123344443332211
Q ss_pred C---------C---CHHHHHHHHHhcHHHHHHHHHHchHHHHHHHHHccCCCCChhHHHHHHHHHHHHHHHhcCCCCCCc
Q 017616 280 G---------V---SERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYK 347 (368)
Q Consensus 280 g---------~---~~eeL~~~l~~G~~Are~LI~~nlrLV~~IAkrY~~rg~d~eDLiQEG~iGLirAVekFDpskG~r 347 (368)
. . ....+.+.++.|+.|+++||++|+|||.+||++|.++|++++||+|||+||||+||++|||++|++
T Consensus 78 ~~~~~~~~~~~~~~el~~l~~~~~~~~~a~~~li~~~~~lv~~~a~~~~~~~~~~~dl~q~g~~gl~~a~~~fd~~~g~~ 157 (180)
T d1ku2a2 78 TVEEVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFK 157 (180)
T ss_dssp THHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCSSSSCHHHHHHHHHHHHHHHHHHCCGGGCSC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 1 1 134566777889999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 017616 348 FSTYVQYWIRKSISKMVASA 367 (368)
Q Consensus 348 FSTYA~~wIRqaI~r~Lrr~ 367 (368)
|+|||+||||++|.++|+++
T Consensus 158 f~tya~~~i~~~i~~~~~~~ 177 (180)
T d1ku2a2 158 FSTYATWWIRQAINRAIADQ 177 (180)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999875
No 2
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Probab=99.92 E-value=2.5e-25 Score=209.20 Aligned_cols=90 Identities=32% Similarity=0.770 Sum_probs=79.1
Q ss_pred HcCCCHHH---HHHHHHhc----HHHHHHHHHHchHHHHHHHHHccCCCCChhHHHHHHHHHHHHHHHhcCCCCCCcccc
Q 017616 278 AAGVSERV---LKQHLAFG----WYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFST 350 (368)
Q Consensus 278 a~g~~~ee---L~~~l~~G----~~Are~LI~~nlrLV~~IAkrY~~rg~d~eDLiQEG~iGLirAVekFDpskG~rFST 350 (368)
.+|++..+ +.+.++.| ..|+++||+.|+|||.+||++|.++|++++||+|+|++|||+||++|||.+|++|||
T Consensus 238 ~~gl~~~elk~i~~~i~~ge~~~~~ak~~~~~~~~~lv~~~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~~~~~~f~~ 317 (334)
T d1siga_ 238 ETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST 317 (334)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTSTTSSSCHHHHHHHHHHHHHHHHHHCCGGGCCCHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHhhccchHHHHHHhHHHHHHHHHHhccCCCCCHHHHHHhhHHHHHHHHHhcCCCCCCchHh
Confidence 34554433 33444445 459999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017616 351 YVQYWIRKSISKMVASA 367 (368)
Q Consensus 351 YA~~wIRqaI~r~Lrr~ 367 (368)
||+|||||+|.++|++|
T Consensus 318 ~~~~~~~~~~~~~~~~~ 334 (334)
T d1siga_ 318 YATWWIRQAITRSIADQ 334 (334)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhCC
Confidence 99999999999999975
No 3
>d1rp3a3 a.177.1.1 (A:0-86) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=99.87 E-value=1.2e-22 Score=162.12 Aligned_cols=73 Identities=25% Similarity=0.399 Sum_probs=69.4
Q ss_pred HHHHHHHHHchHHHHHHHHHccCC---CCChhHHHHHHHHHHHHHHHhcCCCCCCccccHHHHHHHHHHHHHHHhc
Q 017616 295 YCREELIKSTRPLVLFLARNYRGL---GIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVASA 367 (368)
Q Consensus 295 ~Are~LI~~nlrLV~~IAkrY~~r---g~d~eDLiQEG~iGLirAVekFDpskG~rFSTYA~~wIRqaI~r~Lrr~ 367 (368)
..+++||+.|+|||.++|++|.++ ++++|||+|+|++||++|+++|||++|.+|+|||.+|||++|.++||+.
T Consensus 10 ~~re~li~~~~~LV~~ia~~~~~~~~~~~e~eDL~q~G~igL~~A~~~yd~~~g~~F~tYA~~~Irgai~d~lRk~ 85 (87)
T d1rp3a3 10 IEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSL 85 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTSCHHHHHHHHHHHHHHHHHTCCCCCTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 368999999999999999999765 8999999999999999999999999999999999999999999999985
No 4
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=98.77 E-value=5.5e-09 Score=83.34 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=75.0
Q ss_pred CHHHHHHHHHhcHH-HHHHHHHHchHHHHHHHHHccCCCCChhHHHHHHHHHHHHHHHhcCCCCCCccccHHHHHHHHHH
Q 017616 282 SERVLKQHLAFGWY-CREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSI 360 (368)
Q Consensus 282 ~~eeL~~~l~~G~~-Are~LI~~nlrLV~~IAkrY~~rg~d~eDLiQEG~iGLirAVekFDpskG~rFSTYA~~wIRqaI 360 (368)
++++|..+++.|+. |.+.|+..|.+.|..++.++.+. -+-+|++|++.+.+++.+.+|++. ..|.+|+..-+++.+
T Consensus 8 tD~~Li~~~~~Gd~~Af~~l~~~y~~~l~~~~~~~~~~-~daeDl~Qe~~l~~~~~~~~~~~~--~~~~~wl~~I~~n~~ 84 (113)
T d1or7a2 8 TDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPS-GDVPDVVQEAFIKAYRALDSFRGD--SAFYTWLYRIAVNTA 84 (113)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTSCG-GGHHHHHHHHHHHHHHHGGGCCSS--SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHhcccccCC--CCHHHHHHHHHHHHH
Confidence 36789999999975 99999999999999999998665 579999999999999999999986 369999999999999
Q ss_pred HHHHHhc
Q 017616 361 SKMVASA 367 (368)
Q Consensus 361 ~r~Lrr~ 367 (368)
.+.+|+.
T Consensus 85 ~d~~R~~ 91 (113)
T d1or7a2 85 KNYLVAQ 91 (113)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999874
No 5
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}
Probab=97.21 E-value=0.00018 Score=52.88 Aligned_cols=69 Identities=9% Similarity=-0.040 Sum_probs=61.9
Q ss_pred HHHHHHHHHchHHHHHHHHHccCCCCChhHHHHHHHHHHHHHHHhcCCCCCCccccHHHHHHHHHHHHHHH
Q 017616 295 YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVA 365 (368)
Q Consensus 295 ~Are~LI~~nlrLV~~IAkrY~~rg~d~eDLiQEG~iGLirAVekFDpskG~rFSTYA~~wIRqaI~r~Lr 365 (368)
...++++..|.+-+..+|.++.+-..+-+|++|+..+-+++...+|++. ..|.+|...-+++.+.+.+|
T Consensus 7 ~~f~~~~~~y~~~l~~~~~~~~~d~~~aeDivQd~f~~~~~~~~~~~~~--~~~~~wl~~i~~n~~~d~~R 75 (75)
T d1h3la_ 7 ARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREG--TNLKAWLYRILTNTFINSYR 75 (75)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHGGGCCSS--SCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhhhcCCC--CCHHHHHHHHHHHHHHHHhC
Confidence 3678999999999999999999888999999999999999999999974 46999999999998887653
No 6
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.45 E-value=0.0026 Score=45.39 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHcCCCHHHHHHHHHhc
Q 017616 253 ANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFG 293 (368)
Q Consensus 253 ~~Le~ir~~L~~~~gr~pt~~ewA~a~g~~~eeL~~~l~~G 293 (368)
.++.++..+|..++|++||.++.|+++|++.+++...+..+
T Consensus 15 ~ki~~~~~~l~q~lgRePT~~EiA~~l~~~~e~V~~~l~a~ 55 (57)
T d1l0oc_ 15 NKIRKAKDELSKTRGRAPTVTEIADHLGISPEDVVLAQEAV 55 (57)
T ss_dssp HHHHHHHHHHHHHHTSCCBHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHh
Confidence 35777888999999999999999999999999998877654
No 7
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=95.72 E-value=0.0092 Score=44.14 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHcCCCHHHHHHHHH
Q 017616 252 VANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (368)
Q Consensus 252 ~~~Le~ir~~L~~~~gr~pt~~ewA~a~g~~~eeL~~~l~ 291 (368)
..++++...+|+.++||+||.++.|...||+.+++.+.+.
T Consensus 9 ~~ki~~a~~~L~~~lGR~Pt~~EiA~~lg~s~~e~~~~l~ 48 (77)
T d1rp3a1 9 ERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLD 48 (77)
T ss_dssp HHHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCCCHHHHHHHHCcCHHHHHHHHH
Confidence 4468888999999999999999999999999998877654
No 8
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=93.48 E-value=0.064 Score=38.45 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCchhHHHHHcCC--CHHHHHHHHH
Q 017616 251 VVANLERIKTTLEKESGKAASLNCWAQAAGV--SERVLKQHLA 291 (368)
Q Consensus 251 ~~~~Le~ir~~L~~~~gr~pt~~ewA~a~g~--~~eeL~~~l~ 291 (368)
..-++.++..+|..++||+||.+|.|++.|+ +.+.+...++
T Consensus 10 ~i~rv~r~~~~l~qe~gRePt~eEiA~~l~~~l~~ekV~~~l~ 52 (60)
T d1ku2a1 10 TINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLK 52 (60)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCHHHHHHHHCSSCCHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHCCCCCHHHHHHHHH
Confidence 3445677888999999999999999999974 5666665543
No 9
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=71.90 E-value=2.7 Score=27.86 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHcCCCHHHHHHHHH
Q 017616 253 ANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (368)
Q Consensus 253 ~~Le~ir~~L~~~~gr~pt~~ewA~a~g~~~eeL~~~l~ 291 (368)
..++++..-+++.+..+++.+++|+.+|++...|.+..+
T Consensus 3 ~~i~~v~~yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk 41 (54)
T d1bl0a1 3 ITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFK 41 (54)
T ss_dssp HHHHHHHHHHHTTTTSCCCCHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 346777788888899999999999999999988876554
No 10
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=39.91 E-value=13 Score=24.38 Aligned_cols=37 Identities=24% Similarity=0.234 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHcCCCHHHHHHHHH
Q 017616 255 LERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (368)
Q Consensus 255 Le~ir~~L~~~~gr~pt~~ewA~a~g~~~eeL~~~l~ 291 (368)
++++...+++.+..+.+.++.|+.+||+...|.+..+
T Consensus 5 i~~i~~yi~~~~~~~itl~~lA~~~~~S~~~l~r~Fk 41 (54)
T d1d5ya1 5 IRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFK 41 (54)
T ss_dssp HHHHHHHHHTTSSSSCCCHHHHTTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 5667778888889999999999999999988766543
No 11
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=29.74 E-value=62 Score=22.39 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=17.4
Q ss_pred HhCCCCchhHHHHHcCC-CHHH
Q 017616 265 ESGKAASLNCWAQAAGV-SERV 285 (368)
Q Consensus 265 ~~gr~pt~~ewA~a~g~-~~ee 285 (368)
..|.+||..+.|.+.|+ +...
T Consensus 20 ~~G~~Ps~rei~~~~g~~S~st 41 (71)
T d1jhfa1 20 QTGMPPTRAEIAQRLGFRSPNA 41 (71)
T ss_dssp HHSSCCCHHHHHHHTTCSSHHH
T ss_pred HhCCCCCHHHHHHHcCCCCHHH
Confidence 45999999999999998 4443
No 12
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=29.36 E-value=44 Score=23.87 Aligned_cols=48 Identities=21% Similarity=0.249 Sum_probs=32.6
Q ss_pred chhHHHHHcCCCHHHHHHHHHhcHHHHHHHHHHchHHHHHHHHHccCCCCChhHHHH
Q 017616 271 SLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQ 327 (368)
Q Consensus 271 t~~ewA~a~g~~~eeL~~~l~~G~~Are~LI~~nlrLV~~IAkrY~~rg~d~eDLiQ 327 (368)
+..+.|+.+|++...|-+ +..|+.. .-.+..+.+||.-+ |++++||+.
T Consensus 27 t~~eLA~~~Gvs~~~ls~-iE~G~~~-----~ps~~tl~kia~~L---~v~~~~Ll~ 74 (82)
T d2ofya1 27 SMVTVAFDAGISVETLRK-IETGRIA-----TPAFFTIAAVARVL---DLSLDDVAA 74 (82)
T ss_dssp CHHHHHHHHTCCHHHHHH-HHTTCCS-----SCBHHHHHHHHHHT---TCCHHHHHT
T ss_pred CHHHHHHHHcCCHHHHHH-HHcCCcC-----CCCHHHHHHHHHHH---CCCHHHHHh
Confidence 678899999998876543 4444310 01355667777776 889999985
No 13
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=28.94 E-value=71 Score=21.72 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCchhHHHHHcCCCHHHHHHHH
Q 017616 258 IKTTLEKESGKAASLNCWAQAAGVSERVLKQHL 290 (368)
Q Consensus 258 ir~~L~~~~gr~pt~~ewA~a~g~~~eeL~~~l 290 (368)
+...+++.--.+|+..+.|...|+++.+++..+
T Consensus 12 I~~~~~~~g~~PP~vrdl~~~l~~~e~~~~~lL 44 (64)
T d1lvaa3 12 LEDKYRVSRWQPPSFKEVAGSFNLDPSELEELL 44 (64)
T ss_dssp HHHHHHHHTTSCCBHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCcHHHHHHHhCCCHHHHHHHH
Confidence 333344433489999999999999988766544
Done!