BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017617
(368 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1R52|A Chain A, Crystal Structure Of The Bifunctional Chorismate Synthase
From Saccharomyces Cerevisiae
pdb|1R52|B Chain B, Crystal Structure Of The Bifunctional Chorismate Synthase
From Saccharomyces Cerevisiae
pdb|1R52|C Chain C, Crystal Structure Of The Bifunctional Chorismate Synthase
From Saccharomyces Cerevisiae
pdb|1R52|D Chain D, Crystal Structure Of The Bifunctional Chorismate Synthase
From Saccharomyces Cerevisiae
pdb|1R53|A Chain A, Crystal Structure Of The Bifunctional Chorismate Synthase
From Saccharomyces Cerevisiae
Length = 382
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/320 (49%), Positives = 201/320 (62%), Gaps = 8/320 (2%)
Query: 55 SAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETD 114
S FG FRVTT+GESH VGCI+DG PP + L+EAD+Q L RRRPGQS+++TPR E D
Sbjct: 2 STFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRPGQSKLSTPRDEKD 61
Query: 115 TCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYXXXXXXXX 174
+I SG G T GTPI + + N DQR HDYS+M RPSHAD TY KY
Sbjct: 62 RVEIQSGTEFGKTLGTPIAMMIKNEDQRPHDYSDMDKFPRPSHADFTYSEKYGIKASSGG 121
Query: 175 XXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEM------LTL 228
ARETIGRVA GA+A+K L Q + EI+A+V+Q + + D D E +T
Sbjct: 122 GRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGEIKMNRDSFDPEFQHLLNTITR 181
Query: 229 DQVES-NIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPVFDKLEAE 287
++V+S +RCPD A M+ I+ TC+VRN P GLG P FDKLEA
Sbjct: 182 EKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPCFDKLEAM 241
Query: 288 LAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTD-EFGNIRTRTNRSGGIQGGISNG 346
LA AM+S+PA+KGFE+GSGF G + GS+HND FY + E +RT+TN SGG+QGGISNG
Sbjct: 242 LAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKETNRLRTKTNNSGGVQGGISNG 301
Query: 347 EIINMRIAFKPTSTIGVKNR 366
E I + FK +TI + +
Sbjct: 302 ENIYFSVPFKSVATISQEQK 321
>pdb|1UM0|A Chain A, Crystal Structure Of Chorismate Synthase Complexed With
Fmn
pdb|1UM0|B Chain B, Crystal Structure Of Chorismate Synthase Complexed With
Fmn
pdb|1UM0|C Chain C, Crystal Structure Of Chorismate Synthase Complexed With
Fmn
pdb|1UM0|D Chain D, Crystal Structure Of Chorismate Synthase Complexed With
Fmn
pdb|1UMF|A Chain A, Crystal Structure Of Chorismate Synthase
pdb|1UMF|B Chain B, Crystal Structure Of Chorismate Synthase
pdb|1UMF|C Chain C, Crystal Structure Of Chorismate Synthase
pdb|1UMF|D Chain D, Crystal Structure Of Chorismate Synthase
Length = 365
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 164/317 (51%), Gaps = 27/317 (8%)
Query: 55 SAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETD 114
+ G + R+TTFGESHG +G ++DG P I + A ++ ++ RR+ G++ TPRKE D
Sbjct: 2 NTLGRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDD 61
Query: 115 TCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYXXXXXXXX 174
+I SGV E +TGTPI + N R DY + +RPSHAD TY KY
Sbjct: 62 KVEITSGVFEDFSTGTPIGFLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGG 121
Query: 175 XXXXARETIGRVAPGAVAKKILKQFAGT------EILAYVSQAHNVVLPEDVVDHEMLTL 228
ARE+ RVA GA AK +L++ EI ++ ++ + E+ L
Sbjct: 122 GRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGIKAKNYDF---NHALKSEIFAL 178
Query: 229 DQVESNIVRCPDPEYAEK--MIAAIDAXXXXXXXXXXXXTCIVRN--CPRGLGSPVFDKL 284
D+ + E A+K + AI I N P GLG ++ KL
Sbjct: 179 DE---------EQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYAKL 229
Query: 285 EAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGIS 344
+A++A+AMM L K E+G G + L GSE+ND D+ G + +NRSGG+ GG+S
Sbjct: 230 DAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYND--LMDQKGFL---SNRSGGVLGGMS 284
Query: 345 NGEIINMRIAFKPTSTI 361
NGE I +R+ FKPT +I
Sbjct: 285 NGEEIIVRVHFKPTPSI 301
>pdb|1SQ1|A Chain A, Crystal Structure Of The Chorismate Synthase From
Campylobacter Jejuni, Northeast Structural Genomics
Target Br19
Length = 370
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 156/310 (50%), Gaps = 10/310 (3%)
Query: 55 SAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETD 114
+ FGT + T+FGESHG VGCIIDG P + E +Q +LD+R+ G S+ TPRKE+D
Sbjct: 2 NTFGTRLKFTSFGESHGVAVGCIIDGXPAGVKFDEEFLQNELDKRKGG-SKFATPRKESD 60
Query: 115 TCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYXXXXXXXX 174
++ SGV EG TTG PI + V N + DY + +RP+HAD TY KY
Sbjct: 61 KAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPAHADFTYFYKYGIRDHRGG 120
Query: 175 XXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESN 234
ARE++ RVA GAVA +L++F + S V + E + + +
Sbjct: 121 GRSSARESVARVAGGAVAAXLLREFD----ICVQSGVFGVGTFVSNLKEEEFDFEFAKKS 176
Query: 235 IVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPVFDKLEAELAKAMMS 294
+ C DP+ I V GLG ++DKL+++LA A+
Sbjct: 177 EIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGXLIGLGEVLYDKLDSKLAHALXG 236
Query: 295 LPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIA 354
+ A K E+G G + GS +ND +F +N SGGI GGISNGE + ++
Sbjct: 237 INAVKAVEIGEGINASKXRGSCNNDALKDGKF-----LSNHSGGILGGISNGENLILKTY 291
Query: 355 FKPTSTIGVK 364
FKPT +I K
Sbjct: 292 FKPTPSIFAK 301
>pdb|4ECD|A Chain A, 2.5 Angstrom Resolution Crystal Structure Of
Bifidobacterium Longum Chorismate Synthase
pdb|4ECD|B Chain B, 2.5 Angstrom Resolution Crystal Structure Of
Bifidobacterium Longum Chorismate Synthase
Length = 398
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 149/320 (46%), Gaps = 19/320 (5%)
Query: 61 FRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYS 120
R T GESHG + +I+G P + +S D+ L RRR G R + E D ++ +
Sbjct: 5 LRWQTAGESHGEALVAMIEGLPAGVRISTDDIVSALARRRLGYGRGARMKFEQDKVRLLT 64
Query: 121 GVSEGVTTGTPIHVFVPNT-----------DQRGHDYSEMSVAY-----RPSHADATYDM 164
GV G+T G+P+ + + NT D HD RP HAD T
Sbjct: 65 GVRHGLTLGSPVAIEIANTEWPKWTEVMSADALDHDLPREGRNAPLSRPRPGHADLTGMR 124
Query: 165 KYXXXXXX-XXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDH 223
KY ARET RVA G VAK+ L Q G +A+V V D+
Sbjct: 125 KYGFDDARPVLERSSARETASRVALGEVAKQFLDQAFGIRTVAHVVALGGVQTNPDLPLP 184
Query: 224 EMLTLDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPVFD- 282
L+ ++++ VR D E ++I I+ + P G+G+ V
Sbjct: 185 TPDDLEALDASPVRTLDKEAEVRIIERINEAKKAADTLGGVIEVLAYGVPAGIGTYVESD 244
Query: 283 -KLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQG 341
+L+A LA A+M + A KG E+G GF GS+ +DE + G I +NR+GGI+G
Sbjct: 245 RRLDAALASAIMGIQAFKGVEIGDGFLAASRPGSQAHDEIVVNADGRIDRLSNRAGGIEG 304
Query: 342 GISNGEIINMRIAFKPTSTI 361
G+SNG++I +R A KP +I
Sbjct: 305 GMSNGQVIRVRGAMKPIPSI 324
>pdb|1Q1L|A Chain A, Crystal Structure Of Chorismate Synthase
pdb|1Q1L|B Chain B, Crystal Structure Of Chorismate Synthase
pdb|1Q1L|C Chain C, Crystal Structure Of Chorismate Synthase
pdb|1Q1L|D Chain D, Crystal Structure Of Chorismate Synthase
Length = 401
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 154/328 (46%), Gaps = 32/328 (9%)
Query: 60 YFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIY 119
Y R T GESHG G+ I++G P +PLSE ++ +L RR+ G R + E DT +I
Sbjct: 8 YLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEIL 67
Query: 120 SGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAY------------RPSHADATYDMKYX 167
SGV G T G+PI +F+ N D +M++ RP HAD + +KY
Sbjct: 68 SGVRFGKTLGSPIALFIRNRDWENWK-EKMAIEGEPSPSVVPFTRPRPGHADLSGGIKYN 126
Query: 168 XX-XXXXXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYV-----------SQAHNVV 215
ARET RVA GAV KK L +F G +I ++V
Sbjct: 127 QRDLRNILERASARETAARVAVGAVCKKFLSEF-GIKIGSFVVSIGQKEVEELKDKSYFA 185
Query: 216 LPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRG 275
PE ++ + ++ E + +R P PE E+ ID N P G
Sbjct: 186 NPEKLLSYH----EKAEDSELRIPFPEKDEEFKTYIDEVKEKGESLGGVFEVFALNVPPG 241
Query: 276 LGSPV-FD-KLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRT 333
LGS + +D +++ +A+A S+ A KG E+G GF GS+ +DE E +
Sbjct: 242 LGSHIQWDRRIDGRIAQAXXSIQAIKGVEIGLGFEAARRFGSQVHDEIGWSEGKGYFRHS 301
Query: 334 NRSGGIQGGISNGEIINMRIAFKPTSTI 361
N GG +GGI+NG I +R+A KP T+
Sbjct: 302 NNLGGTEGGITNGXPIVVRVAXKPIPTL 329
>pdb|1ZTB|A Chain A, Crystal Structure Of Chorismate Synthase From
Mycobacterium Tuberculosis
pdb|2G85|A Chain A, Crystal Structure Of Chorismate Synthase From
Mycobacterium Tuberculosis At 2.22 Angstrons Of
Resolution
Length = 401
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 61 FRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYS 120
R T GESHG + +++G + ++ AD+ L RRR G R E D + S
Sbjct: 2 LRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTFERDAVTVLS 61
Query: 121 GVSEGVTTGTPIHVFVPNTDQRGH---------DYSEMS-VAY-------RPSHADATYD 163
G+ G T G PI + + NT+ D +E++ VA RP HAD
Sbjct: 62 GIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGM 121
Query: 164 MKYXXXXXX-XXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVD 222
+KY ARET RVA G VA+ L+Q G E+L++V P +
Sbjct: 122 LKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISI-GASAPYEGPP 180
Query: 223 HEMLTLDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPVF- 281
L ++++ VR D MIA I+A + P GLGS
Sbjct: 181 PRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALGLPVGLGSFTSG 240
Query: 282 -DKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQ 340
+L+++LA A+M + A KG E+G GF GS +DE Y G +R+ TNR+GG++
Sbjct: 241 DHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRS-TNRAGGLE 299
Query: 341 GGISNGEIINMRIAFKPTSTI 361
GG++NG+ + +R A KP ST+
Sbjct: 300 GGMTNGQPLRVRAAMKPISTV 320
>pdb|2O11|A Chain A, Mycobacterium Tuberculosis Chorismate Synthase
pdb|2O12|A Chain A, Mycobacterium Tuberculosis Chorismate Synthase In Complex
With Fmn
pdb|2QHF|A Chain A, Mycobacterium Tuberculosis Chorismate Synthase In Complex
With Nca
Length = 407
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 61 FRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYS 120
R T GESHG + +++G + ++ AD+ L RRR G R E D + S
Sbjct: 2 LRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTFERDAVTVLS 61
Query: 121 GVSEGVTTGTPIHVFVPNTDQRGH---------DYSEMS-VAY-------RPSHADATYD 163
G+ G T G PI + + NT+ D +E++ VA RP HAD
Sbjct: 62 GIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGM 121
Query: 164 MKYXXXXXX-XXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVD 222
+KY ARET RVA G VA+ L+Q G E+L++V P +
Sbjct: 122 LKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISI-GASAPYEGPP 180
Query: 223 HEMLTLDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPVF- 281
L ++++ VR D MIA I+A + P GLGS
Sbjct: 181 PRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALGLPVGLGSFTSG 240
Query: 282 -DKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQ 340
+L+++LA A+M + A KG E+G GF GS +DE Y G +R+ TNR+GG++
Sbjct: 241 DHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRS-TNRAGGLE 299
Query: 341 GGISNGEIINMRIAFKPTSTI 361
GG++NG+ + +R A KP ST+
Sbjct: 300 GGMTNGQPLRVRAAMKPISTV 320
>pdb|1QXO|A Chain A, Crystal Structure Of Chorismate Synthase Complexed With
Oxidized Fmn And Epsp
pdb|1QXO|B Chain B, Crystal Structure Of Chorismate Synthase Complexed With
Oxidized Fmn And Epsp
pdb|1QXO|C Chain C, Crystal Structure Of Chorismate Synthase Complexed With
Oxidized Fmn And Epsp
pdb|1QXO|D Chain D, Crystal Structure Of Chorismate Synthase Complexed With
Oxidized Fmn And Epsp
Length = 388
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 155/320 (48%), Gaps = 25/320 (7%)
Query: 62 RVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSG 121
R T GESHG + II+G P +PL+ D+ DL RR+ G R + E D SG
Sbjct: 2 RYLTAGESHGPRLTAIIEGIPAGLPLTAEDINEDLRRRQGGYGRGGRXKIENDQVVFTSG 61
Query: 122 VSEGVTTGTPIHVFVPNTD-QRGHDY-----------SEMSVAY-RPSHADATYDMKYX- 167
V G TTG PI V N D Q+ D S+ + + RP HAD +KY
Sbjct: 62 VRHGKTTGAPITXDVINKDHQKWLDIXSAEDIEDRLKSKRKITHPRPGHADLVGGIKYRF 121
Query: 168 XXXXXXXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYVS--QAHNVVLPEDVVDHEM 225
ARET RVA GAVAK++L + EI +V + +PE++ E+
Sbjct: 122 DDLRNSLERSSARETTXRVAVGAVAKRLLAEL-DXEIANHVVVFGGKEIDVPENLTVAEI 180
Query: 226 LT-LDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCIVRNCPRGLGSPV-FD- 282
Q E +IV + E +++ ID +V P GLGS V +D
Sbjct: 181 KQRAAQSEVSIV---NQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDR 237
Query: 283 KLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDE-FYTDEFGNIRTRTNRSGGIQG 341
KL+A LA+A++S+ A KG E G GF + GS+ DE ++ E G R RTN GG +G
Sbjct: 238 KLDARLAQAVVSINAFKGVEFGLGFEAGYRKGSQVXDEILWSKEDGYTR-RTNNLGGFEG 296
Query: 342 GISNGEIINMRIAFKPTSTI 361
G +NG+ I +R KP T+
Sbjct: 297 GXTNGQPIVVRGVXKPIPTL 316
>pdb|1EWF|A Chain A, The 1.7 Angstrom Crystal Structure Of Bpi
Length = 456
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 16 TDGSLGSLLPDLRRQLPSPNVQILIRSRTPKKLQVKAAGSAFGTYFRVTTFG 67
T G+ LP++ ++ P+ +QI + + TP L V+ G F V F
Sbjct: 294 TTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFA 345
>pdb|1BP1|A Chain A, Crystal Structure Of Bpi, The Human Bactericidal
Permeability-Increasing Protein
Length = 456
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 16 TDGSLGSLLPDLRRQLPSPNVQILIRSRTPKKLQVKAAGSAFGTYFRVTTFG 67
T G+ LP++ ++ P+ +QI + + TP L V+ G F V F
Sbjct: 294 TTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFA 345
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,376,908
Number of Sequences: 62578
Number of extensions: 417786
Number of successful extensions: 863
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 832
Number of HSP's gapped (non-prelim): 12
length of query: 368
length of database: 14,973,337
effective HSP length: 100
effective length of query: 268
effective length of database: 8,715,537
effective search space: 2335763916
effective search space used: 2335763916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)