Your job contains 1 sequence.
>017619
MADLRIVEEGLGRTQLVEQEQDDGKDSENGINKEKGLERSEVQDEQKGELQLQQLLQQKS
KRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALAL
KKVPKINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVY
VVVALIETLTTKRRPNVLEPRHLSIFTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEH
SDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSGPL
REDAPSWCRAPFEPEGLLSYSLWYNWYSLWTCFDSFQGSLCEAQALGLDGVWLTYNSHHS
SFYKCYSY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017619
(368 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180305 - symbol:AT5G27730 "AT5G27730" species... 831 6.4e-83 1
TAIR|locus:2160902 - symbol:AT5G47900 "AT5G47900" species... 696 1.3e-68 1
UNIPROTKB|F1NBK1 - symbol:HGSNAT "Uncharacterized protein... 279 1.2e-23 1
MGI|MGI:1196297 - symbol:Hgsnat "heparan-alpha-glucosamin... 269 2.0e-22 1
UNIPROTKB|Q68CP4 - symbol:HGSNAT "Heparan-alpha-glucosami... 249 6.2e-19 1
UNIPROTKB|F1MF45 - symbol:HGSNAT "Uncharacterized protein... 248 6.5e-19 1
DICTYBASE|DDB_G0286315 - symbol:DDB_G0286315 "transmembra... 225 1.2e-15 2
UNIPROTKB|Q489U3 - symbol:CPS_0413 "Putative membrane pro... 192 3.0e-14 3
TIGR_CMR|CPS_0413 - symbol:CPS_0413 "putative membrane pr... 192 3.0e-14 3
DICTYBASE|DDB_G0270192 - symbol:DDB_G0270192 "DUF1624 fam... 169 6.9e-10 1
UNIPROTKB|Q8EBK9 - symbol:nagX "Uncharacterized protein" ... 136 3.5e-07 2
TIGR_CMR|SO_3504 - symbol:SO_3504 "conserved hypothetical... 136 3.5e-07 2
>TAIR|locus:2180305 [details] [associations]
symbol:AT5G27730 "AT5G27730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016556 "mRNA modification" evidence=RCA]
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016740
eggNOG:COG4299 KO:K10532 InterPro:IPR012429 Pfam:PF07786
OMA:IRIYGIL HOGENOM:HOG000243739 ProtClustDB:CLSN2689879
EMBL:AY034969 EMBL:BT002370 IPI:IPI00535083 RefSeq:NP_568500.1
UniGene:At.19161 STRING:Q94CC1 PRIDE:Q94CC1
EnsemblPlants:AT5G27730.1 GeneID:832835 KEGG:ath:AT5G27730
TAIR:At5g27730 InParanoid:Q94CC1 PhylomeDB:Q94CC1
ArrayExpress:Q94CC1 Genevestigator:Q94CC1 Uniprot:Q94CC1
Length = 472
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 157/261 (60%), Positives = 187/261 (71%)
Query: 62 RVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALK 121
R+A+LD FRGLTV LMILVDDAGG + I H+PWNGC LADFVMPFFLFIVGV+IAL+LK
Sbjct: 36 RLASLDIFRGLTVALMILVDDAGGDWPMIAHAPWNGCNLADFVMPFFLFIVGVSIALSLK 95
Query: 122 KVPKINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYV 181
++ A KK+ FRT KLLFWG++LQGG+SHAPD L+YGVD+ +R+CGILQRIAL Y+
Sbjct: 96 RISNKFEACKKVGFRTCKLLFWGLLLQGGFSHAPDELTYGVDVTMMRFCGILQRIALSYL 155
Query: 182 VVALIETLTTKRRPNVLEPRHLSIFTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHS 241
VVAL+E T L SIF +Y W WI VIY+ T Y YVP+W F +
Sbjct: 156 VVALVEIFTKDSHEENLSTGRFSIFKSYYWHWIVAASVLVIYLATLYGTYVPDWEFVVYD 215
Query: 242 DHGV---KKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSG 298
V K V CG+RG L P CNAVGYVDR++ GINH+Y P W R +ACT SP G
Sbjct: 216 KDSVLYGKILSVSCGVRGKLNPPCNAVGYVDRQVLGINHMYHHPAWRRSKACTDDSPYEG 275
Query: 299 PLREDAPSWCRAPFEPEGLLS 319
+R+DAPSWCRAPFEPEG+LS
Sbjct: 276 AIRQDAPSWCRAPFEPEGILS 296
>TAIR|locus:2160902 [details] [associations]
symbol:AT5G47900 "AT5G47900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016886 InterPro:IPR012429
Pfam:PF07786 IPI:IPI00530923 RefSeq:NP_199601.2 UniGene:At.55424
EnsemblPlants:AT5G47900.1 GeneID:834841 KEGG:ath:AT5G47900
TAIR:At5g47900 HOGENOM:HOG000243739 OMA:WTSSYVV PhylomeDB:B3H4C1
ProtClustDB:CLSN2689879 ArrayExpress:B3H4C1 Genevestigator:B3H4C1
Uniprot:B3H4C1
Length = 440
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 146/313 (46%), Positives = 198/313 (63%)
Query: 13 RTQLVEQEQDDGKDSENGINKEKGLERSEVQDEQKGEXXXXXXXXXKSKRVATLDAFRGL 72
RT+L E KD+++ N + E+ ++ E + +R+ +LD FRGL
Sbjct: 2 RTKLTMYEAI--KDNDD--NDHQWREKKDI--ESALQISRSSSLPPDKERLVSLDVFRGL 55
Query: 73 TVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKK 132
TV MILVDD GG I+HSPW+G TLADFVMPFFLFIVGV++A A K + A +K
Sbjct: 56 TVAFMILVDDVGGILPSINHSPWDGVTLADFVMPFFLFIVGVSLAFAYKNLSCRFVATRK 115
Query: 133 IIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTK 192
+ R+LKLL G+ LQGG+ H + L+YG+D++ IR GILQRIA+ Y+VVAL E + K
Sbjct: 116 ALIRSLKLLLLGLFLQGGFIHGLNNLTYGIDVEKIRLMGILQRIAIAYLVVALCE-IWLK 174
Query: 193 RRPNVLEPRHLSIFTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSE-HSDHG--VKKYI 249
NV LS+ Y++ W+ F+ IY+ Y LYVP+W + D G + ++
Sbjct: 175 GNHNVSS--ELSMIKKYRFHWVVAFVITTIYLSLLYGLYVPDWEYQILKEDQGSTLTTFL 232
Query: 250 ---VKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSGPLREDAPS 306
VKCG+RGH GP CNAVG +DR GI HLY PV++R + C+++ PN+GPL DAPS
Sbjct: 233 NLKVKCGVRGHTGPGCNAVGMLDRMFLGIQHLYRKPVYARTKQCSINYPNNGPLPPDAPS 292
Query: 307 WCRAPFEPEGLLS 319
WC+APF+PEGLLS
Sbjct: 293 WCQAPFDPEGLLS 305
>UNIPROTKB|F1NBK1 [details] [associations]
symbol:HGSNAT "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007041 "lysosomal transport" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=IEA] GO:GO:0051259
GO:GO:0005765 GO:GO:0016746 GO:GO:0007041 InterPro:IPR012429
Pfam:PF07786 GeneTree:ENSGT00390000001491 OMA:KHSSWNG
EMBL:AADN02016166 EMBL:AADN02016165 IPI:IPI00595110
Ensembl:ENSGALT00000016483 Uniprot:F1NBK1
Length = 584
Score = 279 (103.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 82/281 (29%), Positives = 135/281 (48%)
Query: 25 KDSENGINKEKGLERSEVQDEQKGEXXXXXXXXXKSKRVATLDAFRGLTVVLMILVDDAG 84
++++ IN E G D + +R+ +LD FRGL++++M+ V+ G
Sbjct: 152 RETDRLINSELG--SPSTTDSPSSDPSPRLWRATSRQRLRSLDTFRGLSLIIMVFVNYGG 209
Query: 85 GAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIFRTLKLLFWG 144
G Y H WNG T+AD V P+F+FI+G +I+L+L + + +K++++ L F
Sbjct: 210 GKYWFFKHESWNGLTVADLVFPWFVFIMGTSISLSLSSTLRWGSSKQKVLWKILWRSFL- 268
Query: 145 IILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN--VLE--- 199
+IL G P+ + +++R G+LQR+ L Y+VVA +E L T+ + LE
Sbjct: 269 LILLGVIVVNPNYCLGALSWENLRIPGVLQRLGLTYLVVAALELLFTRTGADSGTLEMSC 328
Query: 200 PRHLSIFTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLG 259
P I + QWI + VI++ T+ L VP G+ + G +L
Sbjct: 329 PALQDILPFWP-QWIFILMLEVIWLCLTFLLPVPGCPRGYLGPGGIGDF----G--NYLN 381
Query: 260 PACNAVGYVDRELWGINHLYSDPVWSRLEACTLSSPNSGPL 300
A GY+DR + G H+Y P + L T+ G L
Sbjct: 382 CTGGAAGYIDRLVLGEKHIYQHPSCNVLYQTTVPYDPEGIL 422
>MGI|MGI:1196297 [details] [associations]
symbol:Hgsnat "heparan-alpha-glucosaminide
N-acetyltransferase" species:10090 "Mus musculus" [GO:0005764
"lysosome" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0008152 "metabolic process" evidence=ISO] [GO:0015019
"heparan-alpha-glucosaminide N-acetyltransferase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016746 "transferase activity,
transferring acyl groups" evidence=ISO] [GO:0051259 "protein
oligomerization" evidence=ISO] MGI:MGI:1196297 GO:GO:0051259
GO:GO:0016021 GO:GO:0005765 GO:GO:0016746 GO:GO:0007041 CTD:138050
eggNOG:COG4299 HOGENOM:HOG000006803 HOVERGEN:HBG081599 KO:K10532
OrthoDB:EOG4548Z7 ChiTaRS:HGSNAT GO:GO:0015019 InterPro:IPR012429
Pfam:PF07786 EMBL:AK035264 EMBL:AK149883 EMBL:AK152926
EMBL:AK159649 EMBL:AK160068 EMBL:AC093366 EMBL:BC024084
IPI:IPI00317488 IPI:IPI00975056 RefSeq:NP_084160.1 UniGene:Mm.28326
ProteinModelPortal:Q3UDW8 STRING:Q3UDW8 PhosphoSite:Q3UDW8
PaxDb:Q3UDW8 PRIDE:Q3UDW8 Ensembl:ENSMUST00000037609 GeneID:52120
KEGG:mmu:52120 UCSC:uc009lhg.1 GeneTree:ENSGT00390000001491
InParanoid:Q3UDW8 OMA:KHSSWNG NextBio:308520 Bgee:Q3UDW8
CleanEx:MM_HGSNAT Genevestigator:Q3UDW8 Uniprot:Q3UDW8
Length = 656
Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 60 SKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALA 119
+ R+ +D FRGL +VLM+ V+ GG Y HS WNG T+AD V P+F+FI+G +I L+
Sbjct: 258 ANRLRCVDTFRGLALVLMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLS 317
Query: 120 LKKVPKINGAVK-----KIIFRTLKLLFWGIILQG-GYSHAPDALSYGVDMKHIRWCGIL 173
+ + + G K KI++R+ L+ G+I+ Y P LS+ +R G+L
Sbjct: 318 MTSILQ-RGCSKLKLLGKIVWRSFLLICIGVIIVNPNYCLGP--LSWD----KVRIPGVL 370
Query: 174 QRIALVYVVVALIETLTTKRRPN--VLEPRHLSI--FTAYQW-QWIGGFIAFVIYIITTY 228
QR+ + Y VVA++E K P+ LE S+ T+ W QW+ I++ T+
Sbjct: 371 QRLGVTYFVVAVLEFFFWKPVPDSCTLESSCFSLRDITS-SWPQWLTILTLESIWLALTF 429
Query: 229 SLYVPNWSFSEHSDHGVKKYIVKCGMRGHLG--PACN--AVGYVDRELWGINHLYSDP 282
L VP Y+ G+ G LG P C A GY+DR L G NHLY P
Sbjct: 430 FLPVPGCPTG---------YLGPGGI-GDLGKYPHCTGGAAGYIDRLLLGDNHLYQHP 477
>UNIPROTKB|Q68CP4 [details] [associations]
symbol:HGSNAT "Heparan-alpha-glucosaminide
N-acetyltransferase" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0015019
"heparan-alpha-glucosaminide N-acetyltransferase activity"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IDA]
[GO:0005765 "lysosomal membrane" evidence=IDA;TAS] [GO:0007041
"lysosomal transport" evidence=IDA] [GO:0016746 "transferase
activity, transferring acyl groups" evidence=IDA] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0006027
"glycosaminoglycan catabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 GO:GO:0051259 GO:GO:0016021
Reactome:REACT_116125 GO:GO:0005765 GO:GO:0044281 GO:GO:0005975
GO:GO:0016746 GO:GO:0006027 GO:GO:0007041 EMBL:AC113191
EMBL:AK304441 EMBL:CR749838 IPI:IPI00739149 IPI:IPI00908672
RefSeq:NP_689632.2 UniGene:Hs.600384 ProteinModelPortal:Q68CP4
IntAct:Q68CP4 STRING:Q68CP4 PhosphoSite:Q68CP4 DMDM:124007195
PaxDb:Q68CP4 PRIDE:Q68CP4 Ensembl:ENST00000379644
Ensembl:ENST00000458501 GeneID:138050 KEGG:hsa:138050
UCSC:uc003xpx.4 CTD:138050 GeneCards:GC08P042995 H-InvDB:HIX0007487
HGNC:HGNC:26527 HPA:HPA029578 MIM:252930 MIM:610453
neXtProt:NX_Q68CP4 Orphanet:79271 PharmGKB:PA162390851
eggNOG:COG4299 HOGENOM:HOG000006803 HOVERGEN:HBG081599
InParanoid:Q68CP4 KO:K10532 OrthoDB:EOG4548Z7 BRENDA:2.3.1.78
SABIO-RK:Q68CP4 ChiTaRS:HGSNAT GenomeRNAi:138050 NextBio:83735
ArrayExpress:Q68CP4 Bgee:Q68CP4 CleanEx:HS_HGSNAT
Genevestigator:Q68CP4 GO:GO:0015019 InterPro:IPR012429 Pfam:PF07786
Uniprot:Q68CP4
Length = 663
Score = 249 (92.7 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 78/234 (33%), Positives = 119/234 (50%)
Query: 62 RVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALK 121
R+ ++D FRG+ ++LM+ V+ GG Y H+ WNG T+AD V P+F+FI+G +I L++
Sbjct: 267 RLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMT 326
Query: 122 KVPKINGAVK-----KIIFRTLKLLFWGIILQG-GYSHAPDALSYGVDMKHIRWCGILQR 175
+ + G K KI +R+ L+ GII+ Y P LS+ +R G+LQR
Sbjct: 327 SILQ-RGCSKFRLLGKIAWRSFLLICIGIIIVNPNYCLGP--LSWD----KVRIPGVLQR 379
Query: 176 IALVYVVVALIETLTTKRRPN--VLEPRHLSI--FTAYQW-QWIGGFIAFVIYIITTYSL 230
+ + Y VVA++E L K P E LS+ T+ W QW+ + +++ T+ L
Sbjct: 380 LGVTYFVVAVLELLFAKPVPEHCASERSCLSLRDITS-SWPQWLLILVLEGLWLGLTFLL 438
Query: 231 YVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACN--AVGYVDRELWGINHLYSDP 282
VP G+ + G P C A GY+DR L G +HLY P
Sbjct: 439 PVPGCPTGYLGPGGIGDF-------GKY-PNCTGGAAGYIDRLLLGDDHLYQHP 484
>UNIPROTKB|F1MF45 [details] [associations]
symbol:HGSNAT "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0016746 "transferase activity, transferring acyl groups"
evidence=IEA] [GO:0007041 "lysosomal transport" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] GO:GO:0051259
GO:GO:0005765 GO:GO:0016746 GO:GO:0007041 InterPro:IPR012429
Pfam:PF07786 GeneTree:ENSGT00390000001491 OMA:KHSSWNG
EMBL:DAAA02060966 IPI:IPI01001394 Ensembl:ENSBTAT00000039742
Uniprot:F1MF45
Length = 592
Score = 248 (92.4 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 86/271 (31%), Positives = 126/271 (46%)
Query: 23 DGKDSENGINKEKGLERSEVQDEQKGEXXXXXXXXXKSKRVATLDAFRGLTVVLMILVDD 82
+ ++++ IN E G S D Q R+ +D FRG+ ++LM+ V+
Sbjct: 162 NSRETDRLINSELG-SPSRASDPQP----EAWRRSAAPLRLRCVDTFRGMALILMVFVNY 216
Query: 83 AGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK-----KIIFRT 137
GG Y HS WNG T+AD V P+F+FI+G +I L++ + + G K KI +R+
Sbjct: 217 GGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQ-RGCSKFRLLGKIAWRS 275
Query: 138 LKLLFWGI-ILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN 196
L+ GI ++ Y P LS+ + R G+LQR+ Y VVA++E L K P
Sbjct: 276 FLLICIGIFVVNPKYCLGP--LSW----EKARIPGVLQRLGATYFVVAVLELLFAKPVPE 329
Query: 197 VL--EPRHLSIF--TAYQW-QWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVK 251
E S+ TA W QW+ I +++ T+ L VP G+
Sbjct: 330 TCASERSCFSLLDITA-SWPQWLFVLILEGVWLALTFFLPVPGCPTGYLGPGGIGD---- 384
Query: 252 CGMRGHLGPACNAVGYVDRELWGINHLYSDP 282
G R + A GYVDR L G HLY P
Sbjct: 385 -GGR-YRNCTGGAAGYVDRLLLGDQHLYQHP 413
>DICTYBASE|DDB_G0286315 [details] [associations]
symbol:DDB_G0286315 "transmembrane protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA]
dictyBase:DDB_G0286315 GO:GO:0016021 EMBL:AAFI02000085
eggNOG:COG4299 KO:K10532 RefSeq:XP_637852.1
EnsemblProtists:DDB0234045 GeneID:8625566 KEGG:ddi:DDB_G0286315
InParanoid:Q54LX9 OMA:SITIMIF Uniprot:Q54LX9
Length = 675
Score = 225 (84.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 59 KSKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIAL 118
K R+ +LD FRG ++ +MI V+ GG Y +HS WNG T+AD V P+F+FI+G+A+ L
Sbjct: 203 KKDRLRSLDVFRGFSITIMIFVNYGGGGYWFFNHSLWNGLTVADLVFPWFVFIMGIAMPL 262
Query: 119 ALKKVPKINGAVKKIIFRTLKLLFWGIILQG-GYSHAPDALSYGVDMKHIRWCGILQRIA 177
+ + K G K+IIF+ KLL IIL G ++ GVD++ R G+LQR +
Sbjct: 263 SFHAMEK-RGTPKRIIFQ--KLLRRSIILFALGLF-----INNGVDLQQWRILGVLQRFS 314
Query: 178 LVYVVVALI 186
+ Y+VV I
Sbjct: 315 ISYLVVGSI 323
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 201 RHLSIFTAYQWQWIGGFIAFVIYIITTYSLYVP 233
++ S Y QW+ I F + + + + VP
Sbjct: 424 KYFSDIAPYWIQWVFALIIFSGWFLLMFLVPVP 456
>UNIPROTKB|Q489U3 [details] [associations]
symbol:CPS_0413 "Putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG4299
InterPro:IPR012429 Pfam:PF07786 OMA:IRIYGIL RefSeq:YP_267171.1
STRING:Q489U3 DNASU:3518441 GeneID:3518441 KEGG:cps:CPS_0413
PATRIC:21464187 HOGENOM:HOG000295496
BioCyc:CPSY167879:GI48-508-MONOMER Uniprot:Q489U3
Length = 358
Score = 192 (72.6 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 53/138 (38%), Positives = 74/138 (53%)
Query: 62 RVATLDAFRGLTVVLMILVDDAGG---AYARIDHSPWNGCTLADFVMPFFLFIVGVAIAL 118
R LDAFRG+T+ LMILV+ G YA + H+ W+G T D V PFFLFI+G A+
Sbjct: 3 RYLALDAFRGITIALMILVNTPGTWSHVYAPLLHAEWDGATPTDLVFPFFLFIIGSAMFF 62
Query: 119 ALKKVPKINGA---VKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQR 175
+ KK + + +KII R + F G +L + + + V+ + R GILQR
Sbjct: 63 SFKK-SNFSASPEQFRKIIKRGFIMFFIGFML--------NVIPFTVNAEDWRIMGILQR 113
Query: 176 IALVYVVVALIETLTTKR 193
I + Y V A + LT R
Sbjct: 114 IGIAYTVAACL-VLTLNR 130
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 312 FEPEGLLS 319
FEPEGLLS
Sbjct: 184 FEPEGLLS 191
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 263 NAVGYVDRELWGINHLYS 280
N + +D ++G NH+Y+
Sbjct: 161 NIIRQLDLAVFGANHMYT 178
>TIGR_CMR|CPS_0413 [details] [associations]
symbol:CPS_0413 "putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG4299 InterPro:IPR012429
Pfam:PF07786 OMA:IRIYGIL RefSeq:YP_267171.1 STRING:Q489U3
DNASU:3518441 GeneID:3518441 KEGG:cps:CPS_0413 PATRIC:21464187
HOGENOM:HOG000295496 BioCyc:CPSY167879:GI48-508-MONOMER
Uniprot:Q489U3
Length = 358
Score = 192 (72.6 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 53/138 (38%), Positives = 74/138 (53%)
Query: 62 RVATLDAFRGLTVVLMILVDDAGG---AYARIDHSPWNGCTLADFVMPFFLFIVGVAIAL 118
R LDAFRG+T+ LMILV+ G YA + H+ W+G T D V PFFLFI+G A+
Sbjct: 3 RYLALDAFRGITIALMILVNTPGTWSHVYAPLLHAEWDGATPTDLVFPFFLFIIGSAMFF 62
Query: 119 ALKKVPKINGA---VKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQR 175
+ KK + + +KII R + F G +L + + + V+ + R GILQR
Sbjct: 63 SFKK-SNFSASPEQFRKIIKRGFIMFFIGFML--------NVIPFTVNAEDWRIMGILQR 113
Query: 176 IALVYVVVALIETLTTKR 193
I + Y V A + LT R
Sbjct: 114 IGIAYTVAACL-VLTLNR 130
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 312 FEPEGLLS 319
FEPEGLLS
Sbjct: 184 FEPEGLLS 191
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 263 NAVGYVDRELWGINHLYS 280
N + +D ++G NH+Y+
Sbjct: 161 NIIRQLDLAVFGANHMYT 178
>DICTYBASE|DDB_G0270192 [details] [associations]
symbol:DDB_G0270192 "DUF1624 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0270192 EMBL:AAFI02000005 eggNOG:COG4299
InterPro:IPR012429 Pfam:PF07786 RefSeq:XP_646608.1 STRING:Q55C73
EnsemblProtists:DDB0190869 GeneID:8617580 KEGG:ddi:DDB_G0270192
InParanoid:Q55C73 OMA:IRIYGIL Uniprot:Q55C73
Length = 426
Score = 169 (64.5 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 47/122 (38%), Positives = 65/122 (53%)
Query: 61 KRVATLDAFRGLTVVLMILVDDAGG--AYARIDHSPWNGCTLADFVMPFFLFIVGVAIAL 118
+R+ +LDA RGLT+ MILVD+ G ++ + WNG + AD + P F+FI G +IAL
Sbjct: 44 RRMGSLDAVRGLTIFGMILVDNQAGNDVIWPLNETEWNGLSTADLIFPSFIFISGFSIAL 103
Query: 119 ALKKVPKINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIAL 178
ALK II RTL L F +Q + D ++ R G+LQRIA+
Sbjct: 104 ALKNSKNTTSTWYGIIRRTLLLFF----IQCFLNLMGDHFNFTT----FRIMGVLQRIAI 155
Query: 179 VY 180
Y
Sbjct: 156 CY 157
>UNIPROTKB|Q8EBK9 [details] [associations]
symbol:nagX "Uncharacterized protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000295496 RefSeq:NP_719051.1
DNASU:1171178 GeneID:1171178 KEGG:son:SO_3504 PATRIC:23526700
OMA:FVGHFIV ProtClustDB:CLSK907194 Uniprot:Q8EBK9
Length = 395
Score = 136 (52.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 53/186 (28%), Positives = 87/186 (46%)
Query: 62 RVATLDAFRGLTV-----------VLMILVDDAGGAYA--RIDHSPWNGCTLADFVMPFF 108
R+ +LDA RG + L+I AG + ++ HS W+G L D + P F
Sbjct: 29 RLMSLDALRGFDMFWILGGEALFGALLIFTGWAGWQWGDTQMHHSEWHGFRLYDLIFPLF 88
Query: 109 LFIVGVAIALALKKVPKINGAVKKIIFRT-LKLLFWGIILQGGYSHAPDALSYGVDMKHI 167
+F+ GVA+ L+ K++ K+ + ++R +K LF ++L Y+H VD I
Sbjct: 89 IFLSGVALGLSPKRLDKLPLHERLPVYRHGVKRLFLLLLLGILYNHGWGT-GAPVDPDKI 147
Query: 168 RWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQ-WQWIGGFIAFVIYIIT 226
R+ +L RIA + AL+ T+ R ++ L + A Q W G A V+
Sbjct: 148 RYASVLGRIAFAWFFAALLVWHTSLRTQVLVAVGILVGYGAMQLWLPFPGGQAGVLSPTV 207
Query: 227 TYSLYV 232
+ + YV
Sbjct: 208 SINAYV 213
Score = 49 (22.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 251 KCGMRGHLGPACNAVGY-------VDRELWGINHLYSDPVWSRL 287
K G+ G G C A+G+ V++ELW + + WS L
Sbjct: 264 KVGLLGAAGGVCLALGWLLDAVIPVNKELWTSSFVLVTSGWSML 307
>TIGR_CMR|SO_3504 [details] [associations]
symbol:SO_3504 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000295496
RefSeq:NP_719051.1 DNASU:1171178 GeneID:1171178 KEGG:son:SO_3504
PATRIC:23526700 OMA:FVGHFIV ProtClustDB:CLSK907194 Uniprot:Q8EBK9
Length = 395
Score = 136 (52.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 53/186 (28%), Positives = 87/186 (46%)
Query: 62 RVATLDAFRGLTV-----------VLMILVDDAGGAYA--RIDHSPWNGCTLADFVMPFF 108
R+ +LDA RG + L+I AG + ++ HS W+G L D + P F
Sbjct: 29 RLMSLDALRGFDMFWILGGEALFGALLIFTGWAGWQWGDTQMHHSEWHGFRLYDLIFPLF 88
Query: 109 LFIVGVAIALALKKVPKINGAVKKIIFRT-LKLLFWGIILQGGYSHAPDALSYGVDMKHI 167
+F+ GVA+ L+ K++ K+ + ++R +K LF ++L Y+H VD I
Sbjct: 89 IFLSGVALGLSPKRLDKLPLHERLPVYRHGVKRLFLLLLLGILYNHGWGT-GAPVDPDKI 147
Query: 168 RWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQ-WQWIGGFIAFVIYIIT 226
R+ +L RIA + AL+ T+ R ++ L + A Q W G A V+
Sbjct: 148 RYASVLGRIAFAWFFAALLVWHTSLRTQVLVAVGILVGYGAMQLWLPFPGGQAGVLSPTV 207
Query: 227 TYSLYV 232
+ + YV
Sbjct: 208 SINAYV 213
Score = 49 (22.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 251 KCGMRGHLGPACNAVGY-------VDRELWGINHLYSDPVWSRL 287
K G+ G G C A+G+ V++ELW + + WS L
Sbjct: 264 KVGLLGAAGGVCLALGWLLDAVIPVNKELWTSSFVLVTSGWSML 307
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.454 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 368 359 0.00081 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 623 (66 KB)
Total size of DFA: 279 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.84u 0.12s 27.96t Elapsed: 00:00:01
Total cpu time: 27.84u 0.12s 27.96t Elapsed: 00:00:01
Start: Mon May 20 20:59:16 2013 End: Mon May 20 20:59:17 2013