BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017627
(368 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 31/314 (9%)
Query: 45 SVKKYSWDDVERFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
+K++S +++ + NFS ++G GGF VY RL + + +K Q F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ-F 82
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSK-LPWRNRM 161
+ E++++ H N+++L G+C E +L++ Y+ NG++ L P S L W R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK-MGFSSAVLXXX 220
IA A+ + YLH+ C I+H D+KA+NILL+E + DFG AK M + +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF---- 276
+ G+ G+ P YL TG +S KTDV+ +GV+LLEL+TG AF
Sbjct: 203 ---------------VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 277 -CPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSP 335
++ +L +L + K+ LVD L G++ +E ++ +A LC + SP
Sbjct: 248 LANDDDVMLLDWVKGLLKE------KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 301
Query: 336 ILRPSATQILHTIK 349
+ RP ++++ ++
Sbjct: 302 MERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 31/314 (9%)
Query: 45 SVKKYSWDDVERFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
+K++S +++ + NF ++G GGF VY RL + +K Q F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ-F 74
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSK-LPWRNRM 161
+ E++++ H N+++L G+C E +L++ Y+ NG++ L P S L W R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK-MGFSSAVLXXX 220
IA A+ + YLH+ C I+H D+KA+NILL+E + DFG AK M + +
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF---- 276
G G+ P YL TG +S KTDV+ +GV+LLEL+TG AF
Sbjct: 195 VR---------------GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 277 -CPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSP 335
++ +L +L + K+ LVD L G++ +E ++ +A LC + SP
Sbjct: 240 LANDDDVMLLDWVKGLLKE------KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 293
Query: 336 ILRPSATQILHTIK 349
+ RP ++++ ++
Sbjct: 294 MERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 37/318 (11%)
Query: 49 YSWDDVERFTQNFSQ--------VIGSGGFSNVYLARLINDSTSTNG-AIKIHVGSDRLS 99
+S+ +++ T NF + +G GGF VY + N + + A + + ++ L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
Q F QE+ ++ H+N+V+L+G+ D D+ L++ Y+PNG+L ++L + L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG--FSSAVL 217
R IA A I +LHE H +H DIK++NILL+E K+ DFG A+ F+ V+
Sbjct: 135 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++G+ Y P LR G + K+D+YSFGV+LLE++TG+ A
Sbjct: 192 XSR---------------IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 278 P-ENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
QLL + + + E + + +D ++ D D AM S+A+ CL +
Sbjct: 236 EHREPQLLLDIKEEIED-----EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 289
Query: 337 LRPSATQILHTIKHQISS 354
RP ++ ++ +S
Sbjct: 290 KRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 158/318 (49%), Gaps = 37/318 (11%)
Query: 49 YSWDDVERFTQNFSQ--------VIGSGGFSNVYLARLINDSTSTNG-AIKIHVGSDRLS 99
+S+ +++ T NF + +G GGF VY + N + + A + + ++ L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
Q F QE+ ++ H+N+V+L+G+ D D+ L++ Y+PNG+L ++L + L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG--FSSAVL 217
R IA A I +LHE H +H DIK++NILL+E K+ DFG A+ F+ V+
Sbjct: 135 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++G+ Y P LR G + K+D+YSFGV+LLE++TG+ A
Sbjct: 192 ---------------XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 278 P-ENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
QLL + + + E + + +D ++ D D AM S+A+ CL +
Sbjct: 236 EHREPQLLLDIKEEIED-----EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 289
Query: 337 LRPSATQILHTIKHQISS 354
RP ++ ++ +S
Sbjct: 290 KRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 37/318 (11%)
Query: 49 YSWDDVERFTQNFSQ--------VIGSGGFSNVYLARLINDSTSTNG-AIKIHVGSDRLS 99
+S+ +++ T NF + +G GGF VY + N + + A + + ++ L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
Q F QE+ ++ H+N+V+L+G+ D D+ L++ Y+PNG+L ++L + L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG--FSSAVL 217
R IA A I +LHE H +H DIK++NILL+E K+ DFG A+ F+ V+
Sbjct: 129 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++G+ Y P LR G + K+D+YSFGV+LLE++TG+ A
Sbjct: 186 XXR---------------IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 229
Query: 278 P-ENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
QLL + + + E + + +D ++ D D AM S+A+ CL +
Sbjct: 230 EHREPQLLLDIKEEIED-----EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 283
Query: 337 LRPSATQILHTIKHQISS 354
RP ++ ++ +S
Sbjct: 284 KRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 37/318 (11%)
Query: 49 YSWDDVERFTQNFSQ--------VIGSGGFSNVYLARLINDSTSTNG-AIKIHVGSDRLS 99
+S+ +++ T NF + G GGF VY + N + + A + + ++ L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
Q F QE+ + H+N+V+L+G+ D D+ L++ Y PNG+L ++L + L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG--FSSAVL 217
R IA A I +LHE H +H DIK++NILL+E K+ DFG A+ F+ V
Sbjct: 126 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++G+ Y P LR G + K+D+YSFGV+LLE++TG+ A
Sbjct: 183 XS---------------RIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 226
Query: 278 P-ENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
QLL + + + E + + +D + D D A S+A+ CL +
Sbjct: 227 EHREPQLLLDIKEEIED-----EEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKN 280
Query: 337 LRPSATQILHTIKHQISS 354
RP ++ ++ +S
Sbjct: 281 KRPDIKKVQQLLQEXTAS 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 40/311 (12%)
Query: 53 DVERFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGA-IKIHVGSDRLSQVFKQELDIL 109
D+E T NF +IG G F VY L +GA + + + SQ ++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVL------RDGAKVALKRRTPESSQGIEEFETEI 86
Query: 110 LHLS---HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS-KLPWRNRMAIAF 165
LS H ++V LIG+CD+R+E +L+++Y+ NG L+ L+G+ + + W R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 166 QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXX 225
A+ + YLH R I+H D+K+ NILL+E+ K+ DFG +K G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG-------------T 190
Query: 226 XXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLT 285
++ G+ GY DP Y G + K+DVYSFGV+L E++ A ++
Sbjct: 191 ELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-------IVQ 243
Query: 286 SLAGSMLN----DIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSA 341
SL M+N + ++ ++VDP LA + R A CL S RPS
Sbjct: 244 SLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
Query: 342 TQILHTIKHQI 352
+L +++ +
Sbjct: 304 GDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 42/312 (13%)
Query: 53 DVERFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGA-IKIHVGSDRLSQVFKQELDIL 109
D+E T NF +IG G F VY L +GA + + + SQ ++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVL------RDGAKVALKRRTPESSQGIEEFETEI 86
Query: 110 LHLS---HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT--PRSSKLPWRNRMAIA 164
LS H ++V LIG+CD+R+E +L+++Y+ NG L+ L+G+ P S + W R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEIC 145
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
A+ + YLH R I+H D+K+ NILL+E+ K+ DFG +K G
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG------------- 189
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
++ G+ GY DP Y G + K+DVYSFGV+L E++ A ++
Sbjct: 190 TELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-------IV 242
Query: 285 TSLAGSMLN----DIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPS 340
SL M+N + ++ ++VDP LA + R A CL S RPS
Sbjct: 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 341 ATQILHTIKHQI 352
+L +++ +
Sbjct: 303 MGDVLWKLEYAL 314
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D+ N + IG+G F V+ A + ++ ++R+++ F +E+ I+ L
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRL 91
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H NIV +G ++ EY+ G+L LH + +L R R+++A+ +A+ +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YLH R IVH D+K+ N+L+++ K+CDFG +++ S +
Sbjct: 152 YLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA---------- 200
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P + P LR ++ K+DVYSFGVIL EL T + + N + + G
Sbjct: 201 -----GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG--- 252
Query: 293 NDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIKHQI 352
C+ ++ ++P++A +I C P RPS I+ ++ I
Sbjct: 253 ---FKCKRLEIPRNLNPQVA------------AIIEGCWTNEPWKRPSFATIMDLLRPLI 297
Query: 353 SS 354
S
Sbjct: 298 KS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D+ N + IG+G F V+ A + ++ ++R+++ F +E+ I+ L
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRL 91
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H NIV +G ++ EY+ G+L LH + +L R R+++A+ +A+ +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YLH R IVH ++K+ N+L+++ K+CDFG +++ S+ +
Sbjct: 152 YLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA---------- 200
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P + P LR ++ K+DVYSFGVIL EL T + + N + + G
Sbjct: 201 -----GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG--- 252
Query: 293 NDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIKHQI 352
C+ ++ ++P++A +I C P RPS I+ ++ I
Sbjct: 253 ---FKCKRLEIPRNLNPQVA------------AIIEGCWTNEPWKRPSFATIMDLLRPLI 297
Query: 353 SS 354
S
Sbjct: 298 KS 299
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF---KQELDILLHLSHDNI 117
++IG GGF VY A I D + A H + +SQ +QE + L H NI
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAAR--HDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ L G C L+ E+ G L L G ++P + A Q+A+ + YLH+
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDE 124
Query: 178 CTLHIVHGDIKASNILLEEHLN--------CKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+ I+H D+K+SNIL+ + + K+ DFG A+
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR---------------- 168
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAG 289
T ++ G+ + P +R M S +DV+S+GV+L EL+TG F +G L G
Sbjct: 169 -TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG--LAVAYG 225
Query: 290 SMLNDIA 296
+N +A
Sbjct: 226 VAMNKLA 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 35/241 (14%)
Query: 55 ERFTQNFSQVIGSGGFSNVYLARL--INDSTSTNGAIKI--HVGSDRLSQVFKQELDILL 110
ER + SQ +G G F +V L R + D+T A+K H G D+ + F++E+ IL
Sbjct: 6 ERHLKYISQ-LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILK 63
Query: 111 HLSHDNIVKLIG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
L D IVK G Y R E L+ EY+P+G L++ L ++L + + Q+
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQIC 121
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ +EYL R VH D+ A NIL+E + K+ DFG AK+
Sbjct: 122 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-----------------L 161
Query: 229 XITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ K ++ PG + P L + S ++DV+SFGV+L EL T + C + +
Sbjct: 162 PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221
Query: 284 L 284
L
Sbjct: 222 L 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNI 117
+ + +G G F NVYLAR + K + + ++E++I HL H NI
Sbjct: 15 DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF-QLAQAIEYLHE 176
++L GY D L+ EY P GT+ +L R + R A +LA A+ Y H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----QRTATYITELANALSYCHS 130
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ ++H DIK N+LL + K+ DFG + SS ++ +
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----------------RRTTL 170
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + M K D++S GV+ E + GM F
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 65 IGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G G F NVYLAR N + K + + ++E++I HL H NI++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y D L+ EY P GT+ +L + SK + +LA A+ Y H + +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK---KV 129
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIK N+LL K+ DFG + SS ++ + G+ Y
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRAALCGTLDY 172
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P + M K D++S GV+ E + G F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNI 117
+ + +G G F NVYLAR + K + + ++E++I HL H NI
Sbjct: 15 DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF-QLAQAIEYLHE 176
++L GY D L+ EY P GT+ +L R + R A +LA A+ Y H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----QRTATYITELANALSYCHS 130
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ ++H DIK N+LL + K+ DFG + SS ++ +
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----------------RRDTL 170
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + M K D++S GV+ E + GM F
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 27 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 138
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 187
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 188 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 55 ERFTQNFSQVIGSGGFSNVYLARL--INDSTSTNGAIKI--HVGSDRLSQVFKQELDILL 110
ER + SQ +G G F +V L R + D+T A+K H G D+ + F++E+ IL
Sbjct: 22 ERHLKYISQ-LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILK 79
Query: 111 HLSHDNIVKLIG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
L D IVK G Y R L+ EY+P+G L++ L ++L + + Q+
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQIC 137
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ +EYL R VH D+ A NIL+E + K+ DFG AK+
Sbjct: 138 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-----------------L 177
Query: 229 XITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ K ++ PG + P L + S ++DV+SFGV+L EL T + C + +
Sbjct: 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 237
Query: 284 L 284
L
Sbjct: 238 L 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 55 ERFTQNFSQVIGSGGFSNVYLARL--INDSTSTNGAIKI--HVGSDRLSQVFKQELDILL 110
ER + SQ +G G F +V L R + D+T A+K H G D+ + F++E+ IL
Sbjct: 9 ERHLKYISQ-LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILK 66
Query: 111 HLSHDNIVKLIG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
L D IVK G Y R L+ EY+P+G L++ L ++L + + Q+
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQIC 124
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ +EYL R VH D+ A NIL+E + K+ DFG AK+
Sbjct: 125 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-----------------L 164
Query: 229 XITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ K ++ PG + P L + S ++DV+SFGV+L EL T + C + +
Sbjct: 165 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 224
Query: 284 L 284
L
Sbjct: 225 L 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 55 ERFTQNFSQVIGSGGFSNVYLARL--INDSTSTNGAIKI--HVGSDRLSQVFKQELDILL 110
ER + SQ +G G F +V L R + D+T A+K H G D+ + F++E+ IL
Sbjct: 10 ERHLKYISQ-LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILK 67
Query: 111 HLSHDNIVKLIG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
L D IVK G Y R L+ EY+P+G L++ L ++L + + Q+
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQIC 125
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ +EYL R VH D+ A NIL+E + K+ DFG AK+
Sbjct: 126 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL-----------------L 165
Query: 229 XITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ K ++ PG + P L + S ++DV+SFGV+L EL T + C + +
Sbjct: 166 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 225
Query: 284 L 284
L
Sbjct: 226 L 226
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 45 SVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
S ++++ +D E + +G G F NVYLAR + K + +
Sbjct: 5 SKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 59
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 116
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 165
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 166 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 164
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 166
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 167 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 164
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 18 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 72
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 73 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 129
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 130 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 178
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 179 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 3 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 114
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 115 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 161
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 162 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P G + ++L + SK +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTAT 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 166
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 167 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 65 IGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G G F NVYLAR + K + + ++E++I HL H NI++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y D L+ EY P GT+ +L + SK + +LA A+ Y H + +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK---RV 128
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIK N+LL K+ DFG + SS ++ + G+ Y
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTTLCGTLDY 171
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P + M K D++S GV+ E + G F
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 3 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 114
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 115 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 161
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 162 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 3 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 164 ---------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 6 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 117
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 164
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 3 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 114
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 115 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 161
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 162 -------RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 164
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 ---------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
+K++ DD + + +G G F NVYLAR + + K + + + ++
Sbjct: 9 RKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI+++ Y DR L+ E+ P G L ++L R + +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFM 120
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y HER ++H DIK N+L+ K+ DFG + S
Sbjct: 121 EELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----------- 166
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ M G+ Y P + K D++ GV+ E + GM F
Sbjct: 167 ------LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
+K++ DD + + +G G F NVYLAR + + K + + + ++
Sbjct: 10 RKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI+++ Y DR L+ E+ P G L ++L R + +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFM 121
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y HER ++H DIK N+L+ K+ DFG + S
Sbjct: 122 EELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----------- 167
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ M G+ Y P + K D++ GV+ E + GM F
Sbjct: 168 ------LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
+K++ DD + + +G G F NVYLAR + + K + + + ++
Sbjct: 9 RKFTIDDF-----DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI+++ Y DR L+ E+ P G L ++L R + +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFM 120
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y HER ++H DIK N+L+ K+ DFG + S
Sbjct: 121 EELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----------- 166
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ M G+ Y P + K D++ GV+ E + GM F
Sbjct: 167 ------LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 65 IGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G G F NVYLAR + K + + ++E++I HL H NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y D L+ EY P GT+ +L + SK + +LA A+ Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK---RV 129
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIK N+LL K+ DFG + SS ++ + G+ Y
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTELCGTLDY 172
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P + M K D++S GV+ E + G F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P G + ++L + SK +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTAT 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 166
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 167 ---------RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 3 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 114
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 115 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 161
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 162 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 113
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 162
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 113
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS-------- 162
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 163 ---------RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 1 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 112
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 161
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 162 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 134/323 (41%), Gaps = 64/323 (19%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIK--IHVGSDRLSQVFKQELDI 108
W+D++ F VIG G F V AR+ D + AIK S + F EL++
Sbjct: 24 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 109 LLHLSHD-NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-------------GTPRSSK 154
L L H NI+ L+G C+ R L EY P+G L + L +S
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + + A +A+ ++YL ++ +H D+ A NIL+ E+ K+ DFG ++
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----- 190
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GM 273
+ + M I S Y+ + +T +DV+S+GV+L E+V+ G
Sbjct: 191 ---GQEVYVKKTMGRLPVRWMAIESLNYS--------VYTTNSDVWSYGVLLWEIVSLGG 239
Query: 274 EAFCPEN-GQLLTSLA-GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCL 331
+C +L L G L +C+ +E+ D + C
Sbjct: 240 TPYCGMTCAELYEKLPQGYRLEKPLNCD----DEVYD-----------------LMRQCW 278
Query: 332 RQSPILRPSATQILHTIKHQISS 354
R+ P RPS QIL ++ +
Sbjct: 279 REKPYERPSFAQILVSLNRMLEE 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANS 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L AS +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 194 FVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 65 IGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G G F NVYLAR + K + + ++E++I HL H NI++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y D L+ EY P GT+ +L + SK + +LA A+ Y H + +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK---RV 126
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIK N+LL K+ DFG + SS ++ + G+ Y
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTTLCGTLDY 169
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P + M K D++S GV+ E + G F
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 134/323 (41%), Gaps = 64/323 (19%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIK--IHVGSDRLSQVFKQELDI 108
W+D++ F VIG G F V AR+ D + AIK S + F EL++
Sbjct: 14 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 109 LLHLSHD-NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-------------GTPRSSK 154
L L H NI+ L+G C+ R L EY P+G L + L +S
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + + A +A+ ++YL ++ +H D+ A NIL+ E+ K+ DFG ++
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----- 180
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GM 273
+ + M I S Y+ + +T +DV+S+GV+L E+V+ G
Sbjct: 181 ---GQEVYVKKTMGRLPVRWMAIESLNYS--------VYTTNSDVWSYGVLLWEIVSLGG 229
Query: 274 EAFCPEN-GQLLTSLA-GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCL 331
+C +L L G L +C+ +E+ D + C
Sbjct: 230 TPYCGMTCAELYEKLPQGYRLEKPLNCD----DEVYD-----------------LMRQCW 268
Query: 332 RQSPILRPSATQILHTIKHQISS 354
R+ P RPS QIL ++ +
Sbjct: 269 REKPYERPSFAQILVSLNRMLEE 291
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 113
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 162
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 163 ---------RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 166
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 167 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 65 IGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G G F NVYLAR + K + + ++E++I HL H NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y D L+ EY P GT+ +L + SK + +LA A+ Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK---RV 129
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIK N+LL K+ DFG + SS ++ + G+ Y
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTDLCGTLDY 172
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P + M K D++S GV+ E + G F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 10 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 124
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 125 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 168
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 228
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 229 PEKFFPKARDLVEKLLVLD 247
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 11 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 125
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 126 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 169
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 230 PEKFFPKARDLVEKLLVLD 248
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ +FG + SS
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-------- 164
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 3 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ +FG + SS
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-------- 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 164 ---------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 13 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 127
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 128 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 171
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 231
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 232 PEKFFPKARDLVEKLLVLD 250
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 12 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 126
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 127 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 170
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 230
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 231 PEKFFPKARDLVEKLLVLD 249
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 40 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 116 NIVKLIGYCDDRDEGVLL-FEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
VKL +C DE + Y NG L + + + R A ++ A+EYL
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYL 153
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H + I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARAN 197
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLND 294
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 257
Query: 295 IADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 258 FPEKFFPKARDLVEKLLVLD 277
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 27 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 138
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 187
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 188 ---------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 17 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 131
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 175
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 235
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 236 PEKFFPKARDLVEKLLVLD 254
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + + D
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 32 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 146
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 190
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 251 PEKFFPKARDLVEKLLVLD 269
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 33 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 147
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANA 191
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 252 PEKFFPKARDLVEKLLVLD 270
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 33 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 147
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 191
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 252 PEKFFPKARDLVEKLLVLD 270
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 33 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 147
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 191
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 252 PEKFFPKARDLVEKLLVLD 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 52/303 (17%)
Query: 47 KKYSW--DDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVF 102
KK W +D E + +G G F NVYLAR + K + +
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-------- 166
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
++ + G+ Y P + K D++S GV+ E + G F Q
Sbjct: 167 ---------RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 283 LLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
I+ E T DF + AR ++S L+ +P RP
Sbjct: 218 -------ETYKRISRVEFT----------FPDFVTEGARDLIS---RLLKHNPSQRPXLR 257
Query: 343 QIL 345
++L
Sbjct: 258 EVL 260
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 36 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 150
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 194
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 255 PEKFFPKARDLVEKLLVLD 273
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 32 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 146
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANS 190
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 251 PEKFFPKARDLVEKLLVLD 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 47 KKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFKQ 104
++++ +D E + +G G F NVYLAR + K + + ++
Sbjct: 6 RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E++I HL H NI++L GY D L+ EY P GT+ +L + SK +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYI 117
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
+LA A+ Y H + ++H DIK N+LL K+ DFG + SS
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------- 164
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+ Y P + M K D++S GV+ E + G F
Sbjct: 165 -------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 35 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 149
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 193
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + + D
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 254 PEKFFPKARDLVEKLLVLD 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 64/323 (19%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIK--IHVGSDRLSQVFKQELDI 108
W+D++ F VIG G F V AR+ D + AIK S + F EL++
Sbjct: 21 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 109 LLHLSHD-NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-------------GTPRSSK 154
L L H NI+ L+G C+ R L EY P+G L + L +S
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + + A +A+ ++YL ++ +H ++ A NIL+ E+ K+ DFG ++
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----- 187
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GM 273
+ + M I S Y+ + +T +DV+S+GV+L E+V+ G
Sbjct: 188 ---GQEVYVKKTMGRLPVRWMAIESLNYS--------VYTTNSDVWSYGVLLWEIVSLGG 236
Query: 274 EAFCPEN-GQLLTSLA-GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCL 331
+C +L L G L +C+ +E+ D + C
Sbjct: 237 TPYCGMTCAELYEKLPQGYRLEKPLNCD----DEVYD-----------------LMRQCW 275
Query: 332 RQSPILRPSATQILHTIKHQISS 354
R+ P RPS QIL ++ +
Sbjct: 276 REKPYERPSFAQILVSLNRMLEE 298
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 38 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 152
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 196
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 256
Query: 296 ADCEATKVNELVDPRLAGD 314
K +LV+ L D
Sbjct: 257 PAAFFPKARDLVEKLLVLD 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 33/239 (13%)
Query: 40 GIDGRSVKKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD 96
G + +K W+D V R T + +G+G F V++ NG K+ V S
Sbjct: 1 GSQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL 53
Query: 97 RLSQV----FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRS 152
+ + F E +++ L H +V+L ++ ++ EY+ NG+L + L TP
Sbjct: 54 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSG 111
Query: 153 SKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGF 212
KL + +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL-- 166
Query: 213 SSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 167 ------------IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS V LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 36 KFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 150
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANS 194
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 255 PEKFFPKARDLVEKLLVLD 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 9 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 61
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 62 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 119
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 120 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 167
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 168 -----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 2 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 54
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 55 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 112
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 113 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 160
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 161 -----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 1 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 53
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 54 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 111
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 159
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 160 -----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T A+KI + S L ++F+ E+ I+ L+H NIV
Sbjct: 20 KTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKL--HGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
KL + L+ EY G + + L HG + + + R Q+ A++Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ IVH D+KA N+LL+ +N K+ DFG S + F + K
Sbjct: 132 K---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDT 171
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
GSP Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 6 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 58
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 116
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 117 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 164
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 165 -----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 6 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 58
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 116
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 117 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 164
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 165 -----IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 108/236 (45%), Gaps = 35/236 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T A+KI + S L ++F+ E+ I+ L+H NIV
Sbjct: 20 KTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + L+ EY G + + L R + R + Q+ A++Y H++
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK- 132
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IVH D+KA N+LL+ +N K+ DFG S + F + K
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDTFC 173
Query: 238 GSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
GSP Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 5 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 57
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 58 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 115
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 116 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 163
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 164 -----IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 47 KKYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-- 101
+K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 10 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSP 62
Query: 102 --FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 63 DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINK 120
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 121 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------- 168
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 169 -----IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ-VFKQELDILLHLSHDNIVKL 120
+V+G G F ++ + T +K + D +Q F +E+ ++ L H N++K
Sbjct: 15 GEVLGKGCFGQA--IKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 121 IG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
IG Y D R + EY+ GTL+ + S+ PW R++ A +A + YLH
Sbjct: 73 IGVLYKDKRLN--FITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLH--- 125
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+++I+H D+ + N L+ E+ N + DFG A++ K+ ++G
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR-KKRYTVVG 184
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+P + P + K DV+SFG++L E++ + A
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T A+KI + S L ++F+ E+ I+ L+H NIV
Sbjct: 13 KTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 69
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKL--HGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
KL + L+ EY G + + L HG + + + R Q+ A++Y H+
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQ 124
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ IVH D+KA N+LL+ +N K+ DFG S + F + K
Sbjct: 125 K---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDT 164
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
GSP Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 48 KYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--- 101
K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSPD 53
Query: 102 -FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKL 111
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 LDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL---------- 158
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 159 ----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 48 KYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--- 101
K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSPD 53
Query: 102 -FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKL 111
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 LDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL---------- 158
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 159 ----IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 48 KYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--- 101
K W+D V R T + +G+G F V++ NG K+ V S + +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSPD 53
Query: 102 -FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKL 111
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 LDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL---------- 158
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 159 ----IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 31/234 (13%)
Query: 63 QVIGSGGFSNVYLAR--LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F+ V LAR L + K + S L ++F+ E+ I+ L+H NIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+ EY G + + L R + R + Q+ A++Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK--- 132
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
IVH D+KA N+LL+ +N K+ DFG S + F + K GS
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDTFCGS 175
Query: 240 PGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
P Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 25/259 (9%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHD 115
F +++G G FS LAR + +TS AIKI H+ + +E D++ L H
Sbjct: 33 KFGKILGEGSFSTTVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VKL D ++ Y NG L + + + R A ++ A+EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLH 147
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ I+H D+K NILL E ++ ++ DFG+AK+ +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANX 191
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+G+ Y P L A +D+++ G I+ +LV G+ F N L+ + D
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 296 ADCEATKVNELVDPRLAGD 314
+ K +LV+ L D
Sbjct: 252 PEKFFPKARDLVEKLLVLD 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 41/311 (13%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G+ Y W+ +E S IGSG F VY + D +K+ + Q F
Sbjct: 23 GQRDSSYYWE-IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVK--ILKVVDPTPEQFQAF 79
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
+ E+ +L H NI+ +GY +D ++ ++ +L + LH + +K +
Sbjct: 80 RNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLID 136
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
IA Q AQ ++YLH + +I+H D+K++NI L E L K+ DFG A +
Sbjct: 137 IARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV------------ 181
Query: 223 XXXXXXXITKQVMM-IGSPGYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCP 278
++QV GS + P +R S ++DVYS+G++L EL+TG
Sbjct: 182 --KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG------ 233
Query: 279 ENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILR 338
L S +N+ P L+ + + +AM + A C+++ R
Sbjct: 234 -------ELPYSHINNRDQIIFMVGRGYASPDLSKLYK-NCPKAMKRLVADCVKKVKEER 285
Query: 339 PSATQILHTIK 349
P QIL +I+
Sbjct: 286 PLFPQILSSIE 296
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T A+KI + S L ++F+ E+ I+ L+H NIV
Sbjct: 20 KTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKL--HGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
KL + L+ EY G + + L HG + + + R Q+ A++Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+ IVH D+KA N+LL+ +N K+ DFG S + F + K
Sbjct: 132 K---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDA 171
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T AIKI + L ++F+ E+ I+ L+H NIV
Sbjct: 18 KTIGKGNFAKVKLARHI--LTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 74
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + L+ EY G + + L R + R++ Q+ A++Y H++
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK- 130
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+KA N+LL+ +N K+ DF GFS+ K G
Sbjct: 131 --RIVHRDLKAENLLLDADMNIKIADF-----GFSNEFTVG-----------GKLDTFCG 172
Query: 239 SPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
SP Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 224
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L + ++ + Q+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGMEYL- 133
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 174
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 31/234 (13%)
Query: 63 QVIGSGGFSNVYLAR--LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F+ V LAR L + K + S L ++F+ E+ I+ L+H NIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+ EY G + + L R + R + Q+ A++Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK--- 132
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
IVH D+KA N+LL+ +N K+ DFG S + F + K GS
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLDEFCGS 175
Query: 240 PGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
P Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDI 108
+V R T + +G+G F V++ NG K+ V S + + F E ++
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSPDAFLAEANL 56
Query: 109 LLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
+ L H +V+L ++ ++ EY+ NG+L + L TP KL + +A Q+A
Sbjct: 57 MKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIA 114
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 115 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL--------------IEDN 157
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 158 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 33/237 (13%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDN 116
+ IG G F+ V LAR + T A+KI + L ++F+ E+ I+ L+H N
Sbjct: 19 LQKTIGKGNFAKVKLARHV--LTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPN 75
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IVKL + L+ EY G + + L R + R + Q+ A++Y H+
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 132
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ +IVH D+KA N+LL+ +N K+ DF GFS+ K
Sbjct: 133 K---YIVHRDLKAENLLLDGDMNIKIADF-----GFSNEFTVG-----------NKLDTF 173
Query: 237 IGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
GSP Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 227
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEFF 171
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 49/292 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+V+G G F V A+ + + AIK + S+ + F EL L ++H NIVKL G
Sbjct: 14 EVVGRGAFGVVCKAKW----RAKDVAIK-QIESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW---RNRMAIAFQLAQAIEYLHERCT 179
C + L+ EY G+L LHG + LP+ + M+ Q +Q + YLH
Sbjct: 69 AC--LNPVCLVMEYAEGGSLYNVLHG---AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 180 LHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
++H D+K N+LL K+CDFG+A T G
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTA------------------CDIQTHMTNNKG 165
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADC 298
S + P S K DV+S+G+IL E++T + F + G +
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--------DEIGGPAFRIM--- 214
Query: 299 EATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIKH 350
V+ P L + + + S+ C + P RPS +I+ + H
Sbjct: 215 --WAVHNGTRPPLIKNL----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 49/292 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+V+G G F V A+ + + AIK + S+ + F EL L ++H NIVKL G
Sbjct: 15 EVVGRGAFGVVCKAKW----RAKDVAIK-QIESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW---RNRMAIAFQLAQAIEYLHERCT 179
C + L+ EY G+L LHG + LP+ + M+ Q +Q + YLH
Sbjct: 70 AC--LNPVCLVMEYAEGGSLYNVLHG---AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 180 LHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
++H D+K N+LL K+CDFG+A T G
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTA------------------CDIQTHMTNNKG 166
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADC 298
S + P S K DV+S+G+IL E++T + F + G +
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--------DEIGGPAFRIM--- 215
Query: 299 EATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIKH 350
V+ P L + + + S+ C + P RPS +I+ + H
Sbjct: 216 --WAVHNGTRPPLIKNL----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T AIKI + L ++F+ E+ I+ L+H NIV
Sbjct: 21 KTIGKGNFAKVKLARHI--LTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 77
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + L+ EY G + + L R + R++ Q+ A++Y H++
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK- 133
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+KA N+LL+ +N K+ DF GFS+ K G
Sbjct: 134 --RIVHRDLKAENLLLDADMNIKIADF-----GFSNEFTVG-----------GKLDAFCG 175
Query: 239 SPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
+P Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL- 129
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 170
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL- 134
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 175
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL- 161
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 202
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL- 128
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 169
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 136
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 177
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL- 130
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 171
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 174
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 135
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 176
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 220
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 137
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 178
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 222
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 171
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 65 IGSGGFSNVYLAR--LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G GG S VYLA ++N + + + F++E+ LSH NIV +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKL--HGTPRSSKLPWRNRMAIAF--QLAQAIEYLHERC 178
++ D L+ EY+ TL E + HG P AI F Q+ I++ H+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAHD-- 129
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+ IVH DIK NIL++ + K+ DFG AK ++ +T+ ++G
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--------------LTQTNHVLG 174
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLND 294
+ Y P + TD+YS G++L E++ G F NG+ S+A + D
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF---NGETAVSIAIKHIQD 227
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 189
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 189
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 30/233 (12%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDS--TSTNGAIKIHVGSDRLSQVFK 103
+ ++ DD E + +G G F NVYLAR + K + + + +
Sbjct: 17 TRHFTIDDFE-----IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 71
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E++I HL H NI++L Y DR L+ EY P G L ++L +S + I
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATI 128
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+LA A+ Y H + ++H DIK N+LL K+ DFG + S
Sbjct: 129 MEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS---------- 175
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ M G+ Y P + M + K D++ GV+ EL+ G F
Sbjct: 176 -------LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS-------QVFKQELDILLHLSHDNI 117
+G G F V+LA N S + + K+ V L + F++E ++L +L H++I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKD---KMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-----------GTPRSSK--LPWRNRMAIA 164
VK G C D D +++FEY+ +G L + L G PR +K L + IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
Q+A + YL + H VH D+ N L+ +L K+ DFG ++ +S+
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST---------- 186
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ M+ + P + +T++DV+SFGVIL E+ T
Sbjct: 187 -DYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 33/228 (14%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ +K +W+ + R + + +G+G F V++A + T A+K + F
Sbjct: 170 KPWEKDAWE-IPRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTMKPGSMSVEAFL 225
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E +++ L HD +VKL ++ ++ E++ G+L + L + SK P +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDF 283
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ Q+A+ + ++ +R + +H D++A+NIL+ L CK+ DFG A++G +
Sbjct: 284 SAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI------- 333
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + G + K+DV+SFG++L+E+VT
Sbjct: 334 -----------------KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH + +K + + IA Q A+ ++YLH + I
Sbjct: 88 YST-KPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E K+ DFG A K +S + + + GS
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS---------------HQFEQLSGSI 186
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLA-GSMLND 294
+ P +R + S ++DVY+FG++L EL+TG + N Q++ + GS+ D
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
Query: 295 IADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
++ + + + M + A CL++ RPS +IL I+
Sbjct: 247 LSKVRS-----------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH + +K + + IA Q A+ ++YLH + I
Sbjct: 76 YST-KPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E K+ DFG A K +S + + + GS
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 174
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLA-GSMLND 294
+ P +R + S ++DVY+FG++L EL+TG + N Q++ + GS+ D
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 234
Query: 295 IADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
++ + + + M + A CL++ RPS +IL I+
Sbjct: 235 LSKVRS-----------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 51 WD----DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQEL 106
WD ++ R + + +G+G F V++ N ST A+K Q F +E
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNN---STKVAVKTLKPGTMSVQAFLEEA 59
Query: 107 DILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+++ L HD +V+L + ++ EY+ G+L + L + K+ + + Q
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQ 118
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+A+ + Y+ + + +H D++A+N+L+ E L CK+ DFG A++
Sbjct: 119 IAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV--------------IE 161
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCP--ENGQLL 284
T + +T P + G + K+DV+SFG++L E+VT + P N ++
Sbjct: 162 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
Query: 285 TSLA-GSMLNDIADC 298
T+L+ G + + +C
Sbjct: 222 TALSQGYRMPRVENC 236
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ IG G F+ V LAR I T A+KI + S L ++F+ E+ I L+H NIV
Sbjct: 20 KTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIV 76
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + L+ EY G + + L R + R + Q+ A++Y H++
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQK- 132
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IVH D+KA N+LL+ N K+ DFG S + F + K
Sbjct: 133 --FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-----------------KLDAFC 173
Query: 238 GSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P Y P + + DV+S GVIL LV+G P +GQ L L +L
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS---LPFDGQNLKELRERVL 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDI 108
+V R T + +G+G F V++ NG K+ V S + + F E ++
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMSPDAFLAEANL 57
Query: 109 LLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
+ L H +V+L ++ ++ EY+ NG+L + L TP KL + +A Q+A
Sbjct: 58 MKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIA 115
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ + ++ ER + +H +++A+NIL+ + L+CK+ DFG A++
Sbjct: 116 EGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARL--------------IEDN 158
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 159 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 48 KYSWDD---VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--- 101
K W+D V R T + +G+G V++ NG K+ V S + +
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYY-------NGHTKVAVKSLKQGSMSPD 53
Query: 102 -FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
F E +++ L H +V+L ++ ++ EY+ NG+L + L TP KL
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKL 111
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A Q+A+ + ++ ER + +H D++A+NIL+ + L+CK+ DFG A++
Sbjct: 112 LDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL---------- 158
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L E+VT
Sbjct: 159 ----IEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 99 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 197
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 255
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 256 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 92 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS---------------HQFEQLSGSI 190
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 248
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 249 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 198
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 256
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 257 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F + +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ E++P G+L+E L ++ + Q+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDHIKLLQYTSQICKGMEYL- 133
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H D+ NIL+E K+ DFG K+ K+
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEXX 174
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS---------------HQFEQLSGSI 198
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 256
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 257 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 170
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 228
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 229 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS---------------HQFEQLSGSI 170
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 228
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 229 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 74 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 172
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 230
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 231 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 61 FSQVIGSGGFSNVYLARL--INDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNI 117
F Q +G G F +V + R + D+T A+K + ++ + F++E++IL L HDNI
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 118 VKLIGYC--DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
VK G C R L+ EY+P G+L++ L ++ + Q+ + +EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
T +H ++ NIL+E K+ DFG K+ K+
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKV-----------------LPQDKEYY 172
Query: 236 MIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ PG + P L S +DV+SFGV+L EL T +E
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 216
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 175
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 233
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 234 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 175
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 233
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 234 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 48/295 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + ++ ++ +L LH + +K + + IA Q A+ ++YLH + I
Sbjct: 88 YST-APQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E K+ DFG A K +S + + + GS
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS---------------HQFEQLSGSI 186
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLA-GSMLND 294
+ P +R + S ++DVY+FG++L EL+TG + N Q++ + GS+ D
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
Query: 295 IADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
++ + + + M + A CL++ RPS +IL I+
Sbjct: 247 LSKVRS-----------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 46/294 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IGSG F VY + D + + + + Q FK E+ +L H NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVK--MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
Y + ++ ++ +L LH +K + IA Q AQ ++YLH + I
Sbjct: 72 YST-APQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA--KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+H D+K++NI L E L K+ DFG A K +S + + + GS
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---------------HQFEQLSGSI 170
Query: 241 GYTDPHYLR---TGMASTKTDVYSFGVILLELVTGMEAFCPENG--QLLTSLAGSMLNDI 295
+ P +R S ++DVY+FG++L EL+TG + N Q++ + L+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS-- 228
Query: 296 ADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
D + N +AM + A CL++ RP QIL +I+
Sbjct: 229 PDLSKVRSN--------------CPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N I+ S+ + F +E ++++ LSH +V+
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQ 69
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+FE++ +G L + L + + + + + + YL E C
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC- 126
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 172
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + + + + DI
Sbjct: 173 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSNSEV----VEDI---- 220
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C R+ P RP+ +++L +
Sbjct: 221 -STGFRLYKPRLA-------STHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ +K +W+ + R + + +G+G F V++A + T A+K + F
Sbjct: 3 KPWEKDAWE-IPRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTMKPGSMSVEAFL 58
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E +++ L HD +VKL ++ ++ E++ G+L + L SK P +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDF 116
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ Q+A+ + ++ +R + +H D++A+NIL+ L CK+ DFG A++
Sbjct: 117 SAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV------------- 160
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L+E+VT
Sbjct: 161 -IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 32/233 (13%)
Query: 54 VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNG---AIK-IHVGSDRLSQVFKQELDIL 109
++R + +G G F V+LA N + A+K + SD + F +E ++L
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKL-----------HGTPRSSKLPWR 158
+L H++IVK G C + D +++FEY+ +G L + L G P ++L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP-PTELTQS 128
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ IA Q+A + YL + H VH D+ N L+ E+L K+ DFG ++ +S+
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST---- 181
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ M+ + P + +T++DV+S GV+L E+ T
Sbjct: 182 -------DYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G S VY R T A+K+ + ++ + E+ +LL LSH NI+KL
Sbjct: 61 LGRGATSIVY--RCKQKGTQKPYALKV-LKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ E L+ E V G L +++ S+ R+ Q+ +A+ YLHE IVH
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEAVAYLHEN---GIVH 171
Query: 185 GDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM---IG 238
D+K N+L K+ DFG +K+ + QV+M G
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKI-------------------VEHQVLMKTVCG 212
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADC 298
+PGY P LR + D++S G+I L+ G E F E G M I +C
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF------MFRRILNC 266
Query: 299 E 299
E
Sbjct: 267 E 267
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 30/230 (13%)
Query: 53 DVERFTQNFSQVI---GSGGFSNVYLARLINDSTSTN-----GAIKIHVGSDRLSQVFKQ 104
D F + F + I G G F V L R + +T ++K G + ++ + K+
Sbjct: 14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL-KK 72
Query: 105 ELDILLHLSHDNIVKLIGYC-DDRDEGV-LLFEYVPNGTLQEKLHGTPRS-SKLPWRNRM 161
E++IL +L H+NIVK G C +D G+ L+ E++P+G+L+E L P++ +K+ + ++
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQL 129
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXX 221
A Q+ + ++YL R VH D+ A N+L+E K+ DFG K +
Sbjct: 130 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK------AIETDK 180
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V + P L +DV+SFGV L EL+T
Sbjct: 181 EXXTVKDDRDSPVF------WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ +K +W+ + R + + +G+G F V++A + T A+K + F
Sbjct: 176 KPWEKDAWE-IPRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTMKPGSMSVEAFL 231
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E +++ L HD +VKL ++ ++ E++ G+L + L + SK P +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDF 289
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ Q+A+ + ++ +R + +H D++A+NIL+ L CK+ DFG A++
Sbjct: 290 SAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV------------- 333
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K+DV+SFG++L+E+VT
Sbjct: 334 -IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 37/288 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTN-GAIKIHVGSDRLSQV-FKQELDILLHLSHDNIVKLIG 122
IG G FS VY A + D ++I D ++ +E+D+L L+H N++K
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKL-PWRNRMAIAFQLAQAIEYLHERCTLH 181
+ +E ++ E G L + + +L P R QL A+E++H R
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
++H DIK +N+ + KL D G + FSS T ++G+P
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRF-FSSKT--------------TAAHSLVGTPY 201
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEAT 301
Y P + + K+D++S G +L E+ L + G +N + C+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAA-----------LQSPFYGDKMNLYSLCK-- 248
Query: 302 KVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
K+ + P L D +E R +++ +C+ P RP T + K
Sbjct: 249 KIEQCDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAK 293
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IG G F +V ++ D A+K + +D +Q F E ++ L H N+V+L+G
Sbjct: 18 QTIGKGEFGDV----MLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 123 YCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+ G+ ++ EY+ G+L + L RS L + + + +A+EYL +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+L+ E K+ DFG K S+
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------------------ 170
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P LR STK+DV+SFG++L E+ +
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 30/230 (13%)
Query: 53 DVERFTQNFSQVI---GSGGFSNVYLARLINDSTSTN-----GAIKIHVGSDRLSQVFKQ 104
D F + F + I G G F V L R + +T ++K G + ++ + K+
Sbjct: 2 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL-KK 60
Query: 105 ELDILLHLSHDNIVKLIGYC-DDRDEGV-LLFEYVPNGTLQEKLHGTPRS-SKLPWRNRM 161
E++IL +L H+NIVK G C +D G+ L+ E++P+G+L+E L P++ +K+ + ++
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQL 117
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXX 221
A Q+ + ++YL R VH D+ A N+L+E K+ DFG K +
Sbjct: 118 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK------AIETDK 168
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V + P L +DV+SFGV L EL+T
Sbjct: 169 EXXTVKDDRDSPVF------WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N I+ S+ + F +E ++++ LSH +V+
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQ 66
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+FE++ +G L + L + + + + + + YL E C
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC- 123
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 169
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + ++ DI
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENR----SNSEVVEDI---- 217
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C ++ P RP+ +++L +
Sbjct: 218 -STGFRLYKPRLA-------STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N I+ S+ + F +E ++++ LSH +V+
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQ 64
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+FE++ +G L + L + + + + + + YL E C
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC- 121
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 167
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + ++ DI
Sbjct: 168 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENR----SNSEVVEDI---- 215
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C ++ P RP+ +++L +
Sbjct: 216 -STGFRLYKPRLA-------STHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IG G F +V ++ D A+K + +D +Q F E ++ L H N+V+L+G
Sbjct: 12 QTIGKGEFGDV----MLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 123 YCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+ G+ ++ EY+ G+L + L RS L + + + +A+EYL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+L+ E K+ DFG +TK+ G
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFG-----------------------LTKEASSTQDTG 159
Query: 242 -----YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P LR STK+DV+SFG++L E+ +
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IG G F +V ++ D A+K + +D +Q F E ++ L H N+V+L+G
Sbjct: 27 QTIGKGEFGDV----MLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 123 YCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+ G+ ++ EY+ G+L + L RS L + + + +A+EYL +
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 137
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+L+ E K+ DFG +TK+ G
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFG-----------------------LTKEASSTQDTG 174
Query: 242 -----YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P LR STK+DV+SFG++L E+ +
Sbjct: 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDIL 109
+W+ + R + + +G+G F V++ N ST A+K Q F +E +++
Sbjct: 6 AWE-IPRESIKLVKKLGAGQFGEVWMGYYNN---STKVAVKTLKPGTMSVQAFLEEANLM 61
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L HD +V+L + ++ E++ G+L + L + K+ + + Q+A+
Sbjct: 62 KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAE 120
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+ Y+ + + +H D++A+N+L+ E L CK+ DFG A++
Sbjct: 121 GMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV--------------IEDNE 163
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P + G + K++V+SFG++L E+VT
Sbjct: 164 YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N IK S+ F +E ++++ LSH +V+
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLVQ 86
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+FE++ +G L + L + + + + + + YL E C
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC- 143
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 189
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + + + + DI
Sbjct: 190 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSNSEV----VEDI---- 237
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C ++ P RP+ +++L +
Sbjct: 238 -STGFRLYKPRLA-------STHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
Q IG G F +V ++ D A+K + +D +Q F E ++ L H N+V+L+G
Sbjct: 199 QTIGKGEFGDV----MLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 123 YCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+ G+ ++ EY+ G+L + L RS L + + + +A+EYL +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+L+ E K+ DFG K S+
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------------------ 351
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P LR STK+DV+SFG++L E+ +
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 105
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 106 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 162
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 163 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY---SVHNKTGAK 216
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 217 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 79
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 80 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 136
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 137 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY---SVHNKTGAK 190
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 191 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 87 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX---XSVHNKTGAK 197
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 198 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 88 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE---YYSVHNKTGAK 198
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 199 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 106
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 107 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 163
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 164 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE---YYSVHNKTGAK 217
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 218 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 84
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 85 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 141
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 142 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE---YYSVHNKTGAK 195
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 196 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 62/309 (20%)
Query: 45 SVKKYSWDDVE--RFTQNFSQVIGSGGFSNVYLA------RLINDSTSTNGAIKIHVGSD 96
+V+ W E R +F V+G+G FS V LA +L+ A++ GS
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS- 62
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ E+ +L + H NIV L + L+ + V G L +++ ++
Sbjct: 63 -----MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-- 115
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNIL---LEEHLNCKLCDFGSAKMGFS 213
R+ + FQ+ A++YLH+ L IVH D+K N+L L+E + DFG +KM
Sbjct: 116 -RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
+VL G+PGY P L S D +S GVI L+ G
Sbjct: 172 GSVLSTA----------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 274 EAFCPENG-----QLLTS---LAGSMLNDIADCEATKVNELVD---------------PR 310
F EN Q+L + +DI+D + L++ P
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 311 LAGDFDLDE 319
+AGD LD+
Sbjct: 276 IAGDTALDK 284
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 62/309 (20%)
Query: 45 SVKKYSWDDVE--RFTQNFSQVIGSGGFSNVYLA------RLINDSTSTNGAIKIHVGSD 96
+V+ W E R +F V+G+G FS V LA +L+ A++ GS
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS- 62
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ E+ +L + H NIV L + L+ + V G L +++ ++
Sbjct: 63 -----MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-- 115
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNIL---LEEHLNCKLCDFGSAKMGFS 213
R+ + FQ+ A++YLH+ L IVH D+K N+L L+E + DFG +KM
Sbjct: 116 -RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
+VL G+PGY P L S D +S GVI L+ G
Sbjct: 172 GSVLSTA----------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 274 EAFCPENG-----QLLTS---LAGSMLNDIADCEATKVNELVD---------------PR 310
F EN Q+L + +DI+D + L++ P
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 311 LAGDFDLDE 319
+AGD LD+
Sbjct: 276 IAGDTALDK 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 86 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 142
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 143 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY---SVHNKTGAK 196
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 197 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 82
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 83 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 139
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 140 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY---SVHNKTGAK 193
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 194 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 87 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE---YYSVHNKTGAK 197
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 198 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 65 IGSGGFSNV--YLARLINDSTS---TNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
+G G F V Y ND T A+K G S +KQE+DIL L H++I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIK 80
Query: 120 LIGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
G C+D+ E L+ EYVP G+L++ L PR S + + A Q+ + + YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS-IGLAQLLLFAQQICEGMAYLHSQ 136
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
H +H ++ A N+LL+ K+ DFG AK AV +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVF--- 185
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P L+ +DV+SFGV L EL+T
Sbjct: 186 ----WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ R + + +G+G F V++ + +T AIK + F +E I+ L
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTW---NGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-GTPRSSKLPWRNRMAIAFQLAQAI 171
HD +V+L + + ++ EY+ G+L + L G R+ KLP N + +A Q+A +
Sbjct: 62 KHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQVAAGM 118
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
Y+ ++ +H D++++NIL+ L CK+ DFG A++ +
Sbjct: 119 AYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK---- 171
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P G + K+DV+SFG++L ELVT
Sbjct: 172 ----------WTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 88 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY---SVHNKTGAK 198
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 199 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 25/225 (11%)
Query: 48 KYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELD 107
K +W+ + R + +G G F V++ + +T AIK + F QE
Sbjct: 3 KDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFLQEAQ 58
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMAIAFQ 166
++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP + +A Q
Sbjct: 59 VMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQ 115
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 116 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL--------------IE 158
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 159 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 65 IGSGGFSNV--YLARLINDSTS---TNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
+G G F V Y ND T A+K G S +KQE+DIL L H++I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIK 80
Query: 120 LIGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
G C+D+ E L+ EYVP G+L++ L PR S + + A Q+ + + YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS-IGLAQLLLFAQQICEGMAYLHAQ 136
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
H +H ++ A N+LL+ K+ DFG AK AV +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVF--- 185
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P L+ +DV+SFGV L EL+T
Sbjct: 186 ----WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDIL 109
+W+ + R + +G G F V++ + +T AIK + F QE ++
Sbjct: 2 AWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFLQEAQVM 57
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMAIAFQLA 168
L H+ +V+L + + ++ EY+ G+L + L G T + +LP + +A Q+A
Sbjct: 58 KKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIA 114
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 115 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL--------------IEDN 157
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 158 EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N I+ S+ + F +E ++++ LSH +V+
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQ 67
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+ E++ +G L + L + + + + + + YL E C
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC- 124
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 170
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + + + + DI
Sbjct: 171 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSNSEV----VEDI---- 218
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C R+ P RP+ +++L +
Sbjct: 219 -STGFRLYKPRLA-------STHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 62/309 (20%)
Query: 45 SVKKYSWDDVE--RFTQNFSQVIGSGGFSNVYLA------RLINDSTSTNGAIKIHVGSD 96
+V+ W E R +F V+G+G FS V LA +L+ A++ GS
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS- 62
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ E+ +L + H NIV L + L+ + V G L +++ ++
Sbjct: 63 -----MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-- 115
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNIL---LEEHLNCKLCDFGSAKMGFS 213
R+ + FQ+ A++YLH+ L IVH D+K N+L L+E + DFG +KM
Sbjct: 116 -RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
+VL G+PGY P L S D +S GVI L+ G
Sbjct: 172 GSVLSTA----------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 274 EAFCPENG-----QLLTS---LAGSMLNDIADCEATKVNELVD---------------PR 310
F EN Q+L + +DI+D + L++ P
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 311 LAGDFDLDE 319
+AGD LD+
Sbjct: 276 IAGDTALDK 284
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 172 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 227
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVD 284
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 329
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 330 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 65 IGSGGFSNV--YLARLINDSTSTNGAIKIHVGSDRLSQ---VFKQELDILLHLSHDNIVK 119
+G G F V Y ND T A+K + +D Q +KQE+DIL L H++I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKA-LKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 120 LIGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
G C+D L+ EYVP G+L++ L PR S + + A Q+ + + YLH +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHS-IGLAQLLLFAQQICEGMAYLHAQ 153
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
H +H D+ A N+LL+ K+ DFG AK AV +
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEXYRVREDGDSPVF--- 202
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P L+ +DV+SFGV L EL+T
Sbjct: 203 ----WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 172 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 227
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVD 284
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 329
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 330 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 62/309 (20%)
Query: 45 SVKKYSWDDVE--RFTQNFSQVIGSGGFSNVYLA------RLINDSTSTNGAIKIHVGSD 96
+V+ W E R +F V+G+G FS V LA +L+ A++ GS
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS- 62
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ E+ +L + H NIV L + L+ + V G L +++ ++
Sbjct: 63 -----MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-- 115
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNIL---LEEHLNCKLCDFGSAKMGFS 213
R+ + FQ+ A++YLH+ L IVH D+K N+L L+E + DFG +KM
Sbjct: 116 -RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
+VL G+PGY P L S D +S GVI L+ G
Sbjct: 172 GSVLSTA----------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 274 EAFCPENG-----QLLTS---LAGSMLNDIADCEATKVNELVD---------------PR 310
F EN Q+L + +DI+D + L++ P
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 311 LAGDFDLDE 319
+AGD LD+
Sbjct: 276 IAGDTALDK 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G F V+ RL D+T L F QE IL SH NIV+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ ++ E V G L ++L + + + A +EYL +C +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCC---IH 236
Query: 185 GDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTD 244
D+ A N L+ E K+ DFG ++ +QV + +T
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG---------LRQVPV----KWTA 283
Query: 245 PHYLRTGMASTKTDVYSFGVILLE 268
P L G S+++DV+SFG++L E
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWE 307
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G F V+ RL D+T L F QE IL SH NIV+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ ++ E V G L ++L + + + A +EYL +C +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCC---IH 236
Query: 185 GDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTD 244
D+ A N L+ E K+ DFG ++ +QV + +T
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG---------LRQVPV----KWTA 283
Query: 245 PHYLRTGMASTKTDVYSFGVILLE 268
P L G S+++DV+SFG++L E
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWE 307
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 172 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 227
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLP--QLVD 284
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 329
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 330 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 255 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 310
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVD 367
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 368 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 412
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 413 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++ +
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P G + K+DV+SFG++L EL T
Sbjct: 176 KFPIK--------------WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 86 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 142
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 143 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 196
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 197 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 3 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 58
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVD 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 116 MSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 160
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 161 --IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 3 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 58
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G T + +LP +
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVD 115
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 116 MSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 160
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 161 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 88 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 198
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 199 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 88 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 198
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 199 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 146
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 147 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 203
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 204 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 257
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 258 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 92
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 93 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 149
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 150 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 203
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 204 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 89 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 145
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+ +
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 199
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 200 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V+LA L+ + A+K + S+ Q F++E ++L L H +IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR------------MAIAFQLA 168
G C + +++FEY+ +G L L +KL +A+A Q+A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ YL LH VH D+ N L+ + L K+ DFG ++ +S+
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----------DYY 191
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M+ + P + +T++DV+SFGV+L E+ T
Sbjct: 192 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 51/295 (17%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDILLHLSHDN 116
F + +GSG F +V+L S+ IK + DR SQV + E+++L L H N
Sbjct: 26 FKRKLGSGAFGDVHLVE--ERSSGLERVIKT-INKDR-SQVPMEQIEAEIEVLKSLDHPN 81
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKL-HGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I+K+ +D ++ E G L E++ R L + Q+ A+ Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 176 ERCTLHIVHGDIKASNILLEE---HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
+ H+VH D+K NIL ++ H K+ DFG A++ S
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD----------------EH 182
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+ Y P + + + K D++S GV++ L+TG F G+ L
Sbjct: 183 STNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPF-----------TGTSL 230
Query: 293 NDIADCEATK-VNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILH 346
++ K N V+ R +D + ML+ + P RPSA Q+LH
Sbjct: 231 EEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLT-------KDPERRPSAAQVLH 278
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
S D E FT+ + IG G F V+ + I++ T AIKI ++ + +QE+
Sbjct: 2 SLDPEELFTK--LEKIGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 57
Query: 108 ILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+L + K G Y D +++ EY+ G+ + L P L I +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIM-EYLGGGSALDLLEPGP----LDETQIATILRE 112
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+ + ++YLH +H DIKA+N+LL EH KL DFG A + +
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---------- 159
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTS 286
K+ +G+P + P ++ +K D++S G+ +EL G P + +L
Sbjct: 160 -----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE----PPHSEL--- 207
Query: 287 LAGSMLNDIADCEATKVNELV----DPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
KV L+ P L G++ ++ + CL + P RP+A
Sbjct: 208 ------------HPMKVLFLIPKNNPPTLEGNY----SKPLKEFVEACLNKEPSFRPTAK 251
Query: 343 QIL 345
++L
Sbjct: 252 ELL 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
S D E FT+ + IG G F V+ + I++ T AIKI ++ + +QE+
Sbjct: 2 SLDPEELFTK--LEKIGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 57
Query: 108 ILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+L + K G Y D +++ EY+ G+ + L P L I +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIM-EYLGGGSALDLLEPGP----LDETQIATILRE 112
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+ + ++YLH +H DIKA+N+LL EH KL DFG A + +
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---------- 159
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTS 286
K+ +G+P + P ++ +K D++S G+ +EL G P + +L
Sbjct: 160 -----KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE----PPHSEL--- 207
Query: 287 LAGSMLNDIADCEATKVNELV----DPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
KV L+ P L G++ ++ + CL + P RP+A
Sbjct: 208 ------------HPMKVLFLIPKNNPPTLEGNY----SKPLKEFVEACLNKEPSFRPTAK 251
Query: 343 QIL 345
++L
Sbjct: 252 ELL 254
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 48 KYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELD 107
K +W+ + R + +G G F V++ + +T AIK + F QE
Sbjct: 1 KDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFLQEAQ 56
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMAIAFQ 166
++ L H+ +V+L + + ++ EY+ G+L + L G + +LP + +A Q
Sbjct: 57 VMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQ 113
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 114 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL--------------IE 156
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
S D E FT+ + IG G F V+ + I++ T AIKI ++ + +QE+
Sbjct: 22 SMDPEELFTK--LEKIGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 108 ILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+L + K G Y D +++ EY+ G+ + L P L I +
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIM-EYLGGGSALDLLEPGP----LDETQIATILRE 132
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+ + ++YLH +H DIKA+N+LL EH KL DFG A + +
Sbjct: 133 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---------- 179
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTS 286
K+ +G+P + P ++ +K D++S G+ +EL G P + +L
Sbjct: 180 -----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE----PPHSEL--- 227
Query: 287 LAGSMLNDIADCEATKVNELV----DPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
KV L+ P L G++ ++ + CL + P RP+A
Sbjct: 228 ------------HPMKVLFLIPKNNPPTLEGNY----SKPLKEFVEACLNKEPSFRPTAK 271
Query: 343 QIL 345
++L
Sbjct: 272 ELL 274
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q IGSG F V+L +N I+ S+ + F +E ++++ LSH +V+
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQ 66
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C ++ L+FE++ +G L + L + + + + + + YL E
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEA-- 122
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+ A N L+ E+ K+ DFG + VL K
Sbjct: 123 -SVIHRDLAARNCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVK------- 169
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P S+K+DV+SFGV++ E+ + E P + + + + DI
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSNSEV----VEDI---- 217
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
+ L PRLA + + I C ++ P RP+ +++L +
Sbjct: 218 -STGFRLYKPRLA-------STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V+LA L+ + A+K + S+ Q F++E ++L L H +IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR------------MAIAFQLA 168
G C + +++FEY+ +G L L +KL +A+A Q+A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ YL LH VH D+ N L+ + L K+ DFG ++ +S+
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----------DYY 185
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M+ + P + +T++DV+SFGV+L E+ T
Sbjct: 186 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 50 SWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDIL 109
+W+ + R + +G G F V++ + +T AIK + F QE ++
Sbjct: 1 AWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFLQEAQVM 56
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMAIAFQLA 168
L H+ +V+L + + ++ EY+ G+L + L G + +LP + +A Q+A
Sbjct: 57 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIA 113
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 114 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL--------------IEDN 156
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 157 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ +G G F V LA + +T A+KI + + ++E+ L L H +I+
Sbjct: 14 KTLGEGSFGKVKLA--YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 71
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL +DE +++ EY N E + K+ + Q+ A+EY H
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 126
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+K N+LL+EHLN K+ DFG + + L G
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----------------CG 168
Query: 239 SPGYTDPHYLRTGM-ASTKTDVYSFGVIL 266
SP Y P + + A + DV+S GVIL
Sbjct: 169 SPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V+LA L+ + A+K + S+ Q F++E ++L L H +IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR------------MAIAFQLA 168
G C + +++FEY+ +G L L +KL +A+A Q+A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ YL LH VH D+ N L+ + L K+ DFG ++ +S+
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----------DYY 214
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M+ + P + +T++DV+SFGV+L E+ T
Sbjct: 215 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ +G G F V LA + +T A+KI + + ++E+ L L H +I+
Sbjct: 10 KTLGEGSFGKVKLA--YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL +DE +++ EY N E + K+ + Q+ A+EY H
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 122
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+K N+LL+EHLN K+ DFG + + L G
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----------------CG 164
Query: 239 SPGYTDPHYLRTGM-ASTKTDVYSFGVIL 266
SP Y P + + A + DV+S GVIL
Sbjct: 165 SPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ +G G F V LA + +T A+KI + + ++E+ L L H +I+
Sbjct: 20 KTLGEGSFGKVKLA--YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 77
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL +DE +++ EY N E + K+ + Q+ A+EY H
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 132
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+K N+LL+EHLN K+ DFG + + L G
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----------------CG 174
Query: 239 SPGYTDPHYLRTGM-ASTKTDVYSFGVIL 266
SP Y P + + A + DV+S GVIL
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--------QVFKQELDILLHL 112
+ + IG GGF V+ RL+ D + AIK + D Q F++E+ I+ +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVV--AIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
+H NIVKL G + V+ E+VP G L +L ++ + W ++ + +A IE
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 173 YLHERCTLHIVHGDIKASNILLEE-----HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXX 227
Y+ + IVH D+++ NI L+ + K+ DFG+++ S
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV----------SG 185
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
Q M + G + Y + K D YSF +IL ++TG F
Sbjct: 186 LLGNFQWMAPETIGAEEESY------TEKADTYSFAMILYTILTGEGPF 228
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 130/323 (40%), Gaps = 60/323 (18%)
Query: 56 RFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHL 112
R+ +F + V+G G F V AR N S AIK I ++LS + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASL 59
Query: 113 SHDNIVKLIGYCDDRDEGV-------------LLFEYVPNGTLQEKLHGTPRSSKLP--W 157
+H +V+ +R V + EY NGTL + +H + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
R + Q+ +A+ Y+H + I+H D+K NI ++E N K+ DFG AK S +
Sbjct: 120 R----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELV----TG 272
IG+ Y L TG + K D+YS G+I E++ TG
Sbjct: 173 LKLDSQNLPGSS-DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
Query: 273 MEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLR 332
ME +L L V DFD ++ + I L +
Sbjct: 232 MERV-----NILKKLRS-----------------VSIEFPPDFDDNKMKVEKKIIRLLID 269
Query: 333 QSPILRPSATQILHT----IKHQ 351
P RP A +L++ +KHQ
Sbjct: 270 HDPNKRPGARTLLNSGWLPVKHQ 292
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 79
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 180
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 79
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 180
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ +G G F V LA + +T A+KI + + ++E+ L L H +I+
Sbjct: 19 KTLGEGSFGKVKLA--YHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 76
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL +DE +++ EY N E + K+ + Q+ A+EY H
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 131
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+K N+LL+EHLN K+ DFG + + L G
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----------------CG 173
Query: 239 SPGYTDPHYLRTGM-ASTKTDVYSFGVIL 266
SP Y P + + A + DV+S GVIL
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 87
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 148 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 188
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 80
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 141 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 181
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 98
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 159 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 199
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 79
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 180
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 61/303 (20%)
Query: 52 DDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
D E FT+ + IG G F V+ + I++ T AIKI ++ + +QE+ +L
Sbjct: 20 DPEELFTK--LERIGKGSFGEVF--KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
+ K G + ++ EY+ G+ + L P + IA L +
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-------DEFQIATMLKE 128
Query: 170 ---AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
++YLH +H DIKA+N+LL E + KL DFG A + +
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---------- 175
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTS 286
K+ +G+P + P ++ +K D++S G+ +EL G P N
Sbjct: 176 -----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE----PPN------ 220
Query: 287 LAGSMLNDIADCEATKVNELV----DPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
+D +V L+ P L GDF ++ CL + P RP+A
Sbjct: 221 ---------SDMHPMRVLFLIPKNNPPTLVGDF----TKSFKEFIDACLNKDPSFRPTAK 267
Query: 343 QIL 345
++L
Sbjct: 268 ELL 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 92
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 153 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 193
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK-QELDILLHLSHDNIVKL 120
++VIG+G F VY A+L DS K+ G + FK +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRL 78
Query: 121 IGYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ + +DE L + +YVP + H + LP +QL +++ Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 175 HERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H + I H DIK N+LL+ KLCDFGSAK
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PN 179
Query: 234 VMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
V I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 91
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 192
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 83
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 144 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 184
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 91
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 192
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+VIG+G F V+ A+L+ S AIK + R +EL I+ + H N+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVE---SDEVAIKKVLQDKRFKN---RELQIMRIVKHPNVVDLKA 99
Query: 123 YC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+ D +DE L + EYVP + H +P +QL +++ Y+H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH- 158
Query: 177 RCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++ I H DIK N+LL+ KL DFGSAK+ + V
Sbjct: 159 --SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----------------PNVS 200
Query: 236 MIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAFCPENG 281
I S Y P + +T D++S G ++ EL+ G F E+G
Sbjct: 201 XICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK-QELDILLHLSHDNIVKL 120
++VIG+G F VY A+L DS K+ G + FK +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRL 78
Query: 121 IGYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ + +DE L + +YVP + H + LP +QL +++ Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 175 HERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H + I H DIK N+LL+ KLCDFGSAK
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PN 179
Query: 234 VMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
V I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 57/301 (18%)
Query: 52 DDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
D E FT+ + IG G F V+ + I++ T AIKI ++ + +QE+ +L
Sbjct: 19 DPEELFTK--LEKIGKGSFGEVF--KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 110 LHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
+ K G Y D +++ EY+ G+ + L P L I ++
Sbjct: 75 SQCDSPYVTKYYGSYLKDTKLWIIM-EYLGGGSALDLLEPGP----LDETQIATILREIL 129
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+ ++YLH +H DIKA+N+LL EH KL DFG A + +
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI------------ 174
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
K+ +G+P + P ++ +K D++S G+ +EL G P + +L
Sbjct: 175 ---KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE----PPHSEL----- 222
Query: 289 GSMLNDIADCEATKVNELV----DPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQI 344
KV L+ P L G++ ++ + CL + P RP+A ++
Sbjct: 223 ----------HPMKVLFLIPKNNPPTLEGNY----SKPLKEFVEACLNKEPSFRPTAKEL 268
Query: 345 L 345
L
Sbjct: 269 L 269
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLH 111
+F++VIG G F VY L++ N KIH L+++ F E I+
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLD-----NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 112 LSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
SH N++ L+G C R EG +++ Y+ +G L+ + + + ++ + Q+A+
Sbjct: 89 FSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 145
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+++L + VH D+ A N +L+E K+ DFG A+
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF---DSVHNKTGAK 199
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M + S L+T +TK+DV+SFGV+L EL+T
Sbjct: 200 LPVKWMALES--------LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 107
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 168 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 208
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 256
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ + H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 113
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 214
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 84
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 145 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 185
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 113
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 214
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + F
Sbjct: 6 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGTMSPEAFL 61
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVD 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D+ A+NIL+ E+L CK+ DFG A++
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARL------------ 163
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 164 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL- 120
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 79
Query: 121 -IGYCDDRDEGV----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
Y + V L+ +YVP + H + LP +QL +++ Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 180
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K +W+ + R + +G G F V++ + +T AIK + + F
Sbjct: 173 QGLAKDAWE-IPRESLRLEVKLGQGCFGEVWMGTW---NGTTRVAIKTLKPGNMSPEAFL 228
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSKLPWRNRMA 162
QE ++ L H+ +V+L + + ++ EY+ G+L + L G + +LP +
Sbjct: 229 QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVD 285
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+A Q+A + Y+ ++ VH D++A+NIL+ E+L CK+ DFG ++
Sbjct: 286 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRL------------ 330
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + +T P G + K+DV+SFG++L EL T
Sbjct: 331 --IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK-QELDILLHLSHDNIVKL 120
++VIG+G F VY A+L DS K+ G + FK +EL I+ L H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRL 78
Query: 121 IGYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ + +DE L + +YVP + H + LP +QL +++ Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 175 HERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H + I H DIK N+LL+ KLCDFGSAK
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PN 179
Query: 234 VMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
V I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 115
Query: 122 GYC----DDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 176 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 216
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 264
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 117
Query: 122 GY----CDDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 178 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 218
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
++VIG+G F VY A+L + AIK + R +EL I+ L H NIV+L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELV--AIKKVLQDKRFKN---RELQIMRKLDHCNIVRLR 158
Query: 122 GY----CDDRDEGVL--LFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
+ + +DE L + +YVP + H + LP +QL +++ Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 176 ERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ I H DIK N+LL+ KLCDFGSAK V
Sbjct: 219 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNV 259
Query: 235 MMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPENG 281
I S Y P + T + DV+S G +L EL+ G F ++G
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N + E K+ DFG + + +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK- 183
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 184 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + +L + +C
Sbjct: 227 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LLELMRMC 263
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 264 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 299
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 43/239 (17%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVK 119
IG G F V+ AR L+ T A+K+ S + F++E ++ + NIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG---------------------TPRSSKLPWR 158
L+G C LLFEY+ G L E L +P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ IA Q+A + YL ER VH D+ N L+ E++ K+ DFG ++ +S+
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+ P + +T++DV+++GV+L E+ + G++ +
Sbjct: 232 ADGNDAIPIR-------------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 54/278 (19%)
Query: 56 RFTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL- 112
+FT + + IG G +S R I+ +T+ A+KI D+ + +E++ILL
Sbjct: 19 QFTDGYEVKEDIGVGSYS--VCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYG 73
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H NI+ L DD ++ E + G L +K+ R R A+ F + + +E
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVE 130
Query: 173 YLHERCTLHIVHGDIKASNIL-LEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
YLH + +VH D+K SNIL ++E N ++CDFG AK
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ------------------ 169
Query: 229 XITKQVMMIGSPGYT----DPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC------P 278
+ + ++ +P YT P L D++S GV+L ++TG F P
Sbjct: 170 -LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP 228
Query: 279 EN-----GQLLTSLAGSMLNDIADCEATKVNEL--VDP 309
E G SL+G N ++D V+++ VDP
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDP 266
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 187
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 188 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 230
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 231 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 267
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 268 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 303
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--------QVFKQELDILLHL 112
+ + IG GGF V+ RL+ D + AIK + D Q F++E+ I+ +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVV--AIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
+H NIVKL G + V+ E+VP G L +L ++ + W ++ + +A IE
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 173 YLHERCTLHIVHGDIKASNILLEE-HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
Y+ + IVH D+++ NI L+ N +C A G S + +
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCA-KVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + YT+ K D YSF +IL ++TG F
Sbjct: 195 PETIGAEEESYTE-----------KADTYSFAMILYTILTGEGPF 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 190
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 191 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 234 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 270
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 271 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 306
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 189
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 190 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 233 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 269
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 270 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 305
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 137/336 (40%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG +
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----------- 171
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 172 -------DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 224
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + +L + +C
Sbjct: 225 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LLELMRMC 261
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 262 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 297
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 189
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 190 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 233 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 269
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 270 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 305
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 183
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 184 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 227 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 263
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 264 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 299
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
V+G G + VY R +++ AIK I R SQ +E+ + HL H NIV+ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRI--AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR-NRMAIAF---QLAQAIEYLHERC 178
+ + E VP G+L L RS P + N I F Q+ + ++YLH+
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 141
Query: 179 TLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IVH DIK N+L+ + K+ DFG++K + + + +++
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDK 197
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G GY G A+ D++S G ++E+ TG F
Sbjct: 198 GPRGY--------GKAA---DIWSLGCTIIEMATGKPPF 225
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 196
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 197 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 240 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 276
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 277 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 312
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK- 218
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 219 -----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 261
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 262 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 298
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 299 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 334
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 55 ERFTQNFSQVIGSGGFSNVYLARLINDSTS-TNGAIKIHVGSDRLSQV--FKQELDILLH 111
ER + +VIG G F VY I+ + + AIK + QV F +E ++
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 112 LSHDNIVKLIGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L+H N++ LIG EG+ +L Y+ +G L + + R+ + ++ ++ Q+A+
Sbjct: 79 LNHPNVLALIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVAR 135
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+EYL E+ VH D+ A N +L+E K+ DFG A+ +L
Sbjct: 136 GMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR-----DILDREYYSVQQHRH 187
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V +T L+T +TK+DV+SFGV+L EL+T
Sbjct: 188 ARLPV------KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 128/325 (39%), Gaps = 60/325 (18%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK---QELDILLHLSHDNIVKL 120
++G G + V R N T AIK + SD V K +E+ +L L H+N+V L
Sbjct: 32 LVGEGSYGMVMKCR--NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ C + L+FE+V + T+ + L P L ++ FQ+ I + H
Sbjct: 90 LEVCKKKKRWYLVFEFV-DHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+I+H DIK NIL+ + KLCDFG A+ + + + +
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---------------VATR 188
Query: 241 GYTDPHYLRTGMASTK-TDVYSFGVILLELVTGMEAF-------------------CPEN 280
Y P L + K DV++ G ++ E+ G F P +
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 281 GQLLTS---LAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPIL 337
+L AG L +I + E E P+L + ++ +A CL P
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPL---ERRYPKL--------SEVVIDLAKKCLHIDPDK 297
Query: 338 RPSATQILHTIKHQISSISFLFSPQ 362
RP ++LH Q+ + FS +
Sbjct: 298 RPFCAELLHHDFFQMDGFAERFSQE 322
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 80/341 (23%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH------------GTPRSSKL 155
++ + ++V+L+G +++ E + G L+ L P SK+
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 131 -----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELV 270
G G + P L+ G+ +T +DV+SFGV+L E+
Sbjct: 183 YYRK------------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 224
Query: 271 TGMEAFCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLS 325
T E P G Q+L + G +L+ +C P + +
Sbjct: 225 TLAEQ--PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFE 261
Query: 326 IAALCLRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +C + +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 262 LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 302
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
V+G G + VY R +++ AIK I R SQ +E+ + HL H NIV+ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRI--AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR-NRMAIAF---QLAQAIEYLHERC 178
+ + E VP G+L L RS P + N I F Q+ + ++YLH+
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 127
Query: 179 TLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IVH DIK N+L+ + K+ DFG++K + + + +++
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDK 183
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G GY G A+ D++S G ++E+ TG F
Sbjct: 184 GPRGY--------GKAA---DIWSLGCTIIEMATGKPPF 211
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 47/289 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTS-TNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
Q IG G F L + D I I S + + ++E+ +L ++ H NIV+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF-QLAQAIEYLHERCTL 180
++ ++ +Y G L ++++ + L +++ F Q+ A++++H+R
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDR--- 144
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
I+H DIK+ NI L + +L DFG A++ S+ L IG+P
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA---------------CIGTP 189
Query: 241 GYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEA 300
Y P + K+D+++ G +L EL T AF AGSM N
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF----------EAGSMKN------- 232
Query: 301 TKVNELVDPRLAGDF---DLDEARAMLSIAALCLRQSPILRPSATQILH 346
LV ++G F L + + S+ + +++P RPS IL
Sbjct: 233 -----LVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 80/341 (23%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH------------GTPRSSKL 155
++ + ++V+L+G +++ E + G L+ L P SK+
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG + + +
Sbjct: 141 -----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELV 270
G G + P L+ G+ +T +DV+SFGV+L E+
Sbjct: 193 YYRK------------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 271 TGMEAFCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLS 325
T E P G Q+L + G +L+ +C P + +
Sbjct: 235 TLAEQ--PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFE 271
Query: 326 IAALCLRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +C + +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 272 LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 312
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY+ + S A+K + F +E ++ +
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 85
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ EY+P G L + L R ++ + +A Q++ A+E
Sbjct: 86 KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAME 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 145 YLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL--------------MTGDTYTA 187
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 36/260 (13%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VG 94
GI S + D+ E F +V+G G F V LAR+ T A+K+ +
Sbjct: 11 GIGVNSSNRLGIDNFE-----FIRVLGKGSFGKVMLARV--KETGDLYAVKVLKKDVILQ 63
Query: 95 SDRLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSK 154
D + ++ + L +H + +L D + E+V G L + + R +
Sbjct: 64 DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE 123
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
R R A ++ A+ +LH++ I++ D+K N+LL+ +CKL DFG K G +
Sbjct: 124 A--RARFYAA-EIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
V G+P Y P L+ + D ++ GV+L E++ G
Sbjct: 178 GV---------------TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
Query: 275 AFCPENGQLLTSLAGSMLND 294
F EN L ++LND
Sbjct: 223 PFEAENED---DLFEAILND 239
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 65 IGSGGFSNV--YLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V Y ND T A+K +L +++E++IL L H++IVK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 121 IGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
G C+D+ E L+ EYVP G+L++ L PR + + A Q+ + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHC-VGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
H +H + A N+LL+ K+ DFG AK AV +V G
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYY---------RVREDG 175
Query: 239 -SP-GYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
SP + P L+ +DV+SFGV L EL+T +C N
Sbjct: 176 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSN 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 136/336 (40%), Gaps = 70/336 (20%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY--LAR-LINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R S+ +G G F VY +A+ ++ D T AIK S R F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG-------TLQEKLHGTPRSSKLPWRNR 160
++ + ++V+L+G +++ E + G +L+ ++ P +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +A ++A + YL+ VH D+ A N ++ E K+ DFG +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----------- 180
Query: 221 XXXXXXXXXITKQVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
G G + P L+ G+ +T +DV+SFGV+L E+ T E
Sbjct: 181 -------DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 276 FCPENG----QLLT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
P G Q+L + G +L+ +C P + + + +C
Sbjct: 234 --PYQGLSNEQVLRFVMEGGLLDKPDNC----------PDM-----------LFELMRMC 270
Query: 331 LRQSPILRPSATQILHTIKHQIS----SISFLFSPQ 362
+ +P +RPS +I+ +IK ++ +SF +S +
Sbjct: 271 WQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEE 306
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 65 IGSGGFSNV--YLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V Y ND T A+K +L +++E++IL L H++IVK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 121 IGYCDDRDEGV--LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
G C+D+ E L+ EYVP G+L++ L PR + + A Q+ + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHC-VGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
H +H + A N+LL+ K+ DFG AK AV +V G
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYY---------RVREDG 174
Query: 239 -SP-GYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
SP + P L+ +DV+SFGV L EL+T +C N
Sbjct: 175 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSN 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 98 LSQVFKQELDILLHLSHDNIVKLIGYCDDRDEG--VLLFEYVPNGTLQEKLHGTPRSSKL 155
+ QV+ QE+ IL L H N+VKL+ DD +E ++FE V G + E P S
Sbjct: 80 IEQVY-QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLS--- 135
Query: 156 PWRNRMAIAFQ-LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFS 213
++ FQ L + IEYLH + I+H DIK SN+L+ E + K+ DFG S + S
Sbjct: 136 --EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELV 270
A+L +G+P + P L R + DV++ GV L V
Sbjct: 191 DALLSNT----------------VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 271 TGMEAFCPENGQLLTSLAGSMLNDIAD 297
G F E L S S + D
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPD 261
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 55/259 (21%)
Query: 47 KKYSWD---DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHV--------GS 95
++Y +D + R F +V+GSG F V A S T +I++ V S
Sbjct: 32 REYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGIS-KTGVSIQVAVKMLKEKADSS 90
Query: 96 DRLSQVFKQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTL------------ 142
+R + EL ++ L SH+NIV L+G C L+FEY G L
Sbjct: 91 ER--EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFS 148
Query: 143 --------QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL 194
Q++L + L + + + A+Q+A+ +E+L + VH D+ A N+L+
Sbjct: 149 EDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLV 205
Query: 195 EEHLNCKLCDFGSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGM 252
K+CDFG A+ M S+ V+ + P L G+
Sbjct: 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVK---------------WMAPESLFEGI 250
Query: 253 ASTKTDVYSFGVILLELVT 271
+ K+DV+S+G++L E+ +
Sbjct: 251 YTIKSDVWSYGILLWEIFS 269
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 129/323 (39%), Gaps = 60/323 (18%)
Query: 56 RFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHL 112
R+ +F + V+G G F V AR N S AIK I ++LS + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASL 59
Query: 113 SHDNIVKLIGYCDDRDEGV-------------LLFEYVPNGTLQEKLHGTPRSSKLP--W 157
+H +V+ +R V + EY N TL + +H + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
R + Q+ +A+ Y+H + I+H D+K NI ++E N K+ DFG AK S +
Sbjct: 120 R----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELV----TG 272
IG+ Y L TG + K D+YS G+I E++ TG
Sbjct: 173 LKLDSQNLPGSS-DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
Query: 273 MEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLR 332
ME +L L V DFD ++ + I L +
Sbjct: 232 MERV-----NILKKLRS-----------------VSIEFPPDFDDNKMKVEKKIIRLLID 269
Query: 333 QSPILRPSATQILHT----IKHQ 351
P RP A +L++ +KHQ
Sbjct: 270 HDPNKRPGARTLLNSGWLPVKHQ 292
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 46/297 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLIGY 123
+G G F VY A+ N T A K I S+ + + E++IL H IVKL+G
Sbjct: 27 LGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 124 CDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIV 183
+ ++ E+ P G + + R P + Q+ +A+ +LH + I+
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP--QIQVVCRQMLEALNFLHSK---RII 139
Query: 184 HGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYT 243
H D+KA N+L+ + +L DFG + + + K+ IG+P +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---------------LQKRDSFIGTPYWM 184
Query: 244 DPHY-----LRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADC 298
P ++ K D++S G+ L+E M P + +L +L IA
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIE----MAQIEPPHHELNPM---RVLLKIAKS 237
Query: 299 EATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL-HTIKHQISS 354
+ + L + + +F R L IA L ++P RPSA Q+L H I+S
Sbjct: 238 DPPTL--LTPSKWSVEF-----RDFLKIA---LDKNPETRPSAAQLLEHPFVSSITS 284
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 54/278 (19%)
Query: 56 RFTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL- 112
+FT + + IG G +S R I+ +T+ A+KI D+ + +E++ILL
Sbjct: 19 QFTDGYEVKEDIGVGSYS--VCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYG 73
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H NI+ L DD ++ E G L +K+ R R A+ F + + +E
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITKTVE 130
Query: 173 YLHERCTLHIVHGDIKASNIL-LEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
YLH + +VH D+K SNIL ++E N ++CDFG AK
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ------------------ 169
Query: 229 XITKQVMMIGSPGYT----DPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC------P 278
+ + ++ +P YT P L D++S GV+L +TG F P
Sbjct: 170 -LRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTP 228
Query: 279 EN-----GQLLTSLAGSMLNDIADCEATKVNEL--VDP 309
E G SL+G N ++D V++ VDP
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDP 266
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 46/297 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLIGY 123
+G G F VY A+ N T A K I S+ + + E++IL H IVKL+G
Sbjct: 19 LGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 124 CDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIV 183
+ ++ E+ P G + + R P + Q+ +A+ +LH + I+
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP--QIQVVCRQMLEALNFLHSK---RII 131
Query: 184 HGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYT 243
H D+KA N+L+ + +L DFG + + + K+ IG+P +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---------------LQKRDSFIGTPYWM 176
Query: 244 DPHY-----LRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADC 298
P ++ K D++S G+ L+E M P + +L +L IA
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIE----MAQIEPPHHELNPM---RVLLKIAKS 229
Query: 299 EATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL-HTIKHQISS 354
+ + L + + +F R L IA L ++P RPSA Q+L H I+S
Sbjct: 230 DPPTL--LTPSKWSVEF-----RDFLKIA---LDKNPETRPSAAQLLEHPFVSSITS 276
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLH 111
S+ +GSG V LA T AIKI +GS R + + E++IL
Sbjct: 14 MSKTLGSGACGEVKLA--FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
L+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A+
Sbjct: 72 LNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV 127
Query: 172 EYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--------- 175
Query: 229 XITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 176 -------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLH 111
S+ +GSG V LA T AIKI +GS R + + E++IL
Sbjct: 14 MSKTLGSGACGEVKLA--FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
L+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A+
Sbjct: 72 LNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV 127
Query: 172 EYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--------- 175
Query: 229 XITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 176 -------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLH 111
S+ +GSG V LA T AIKI +GS R + + E++IL
Sbjct: 14 MSKTLGSGACGEVKLA--FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
L+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A+
Sbjct: 72 LNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV 127
Query: 172 EYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--------- 175
Query: 229 XITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 176 -------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 45/283 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
IG G F VY + I++ T AIKI ++ + +QE+ +L I + G
Sbjct: 27 IGKGSFGEVY--KGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ ++ EY+ G+ + L P L I ++ + ++YLH
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSERK--- 137
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H DIKA+N+LL E + KL DFG A + + K+ +G+P +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---------------KRNXFVGTPFW 182
Query: 243 TDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATK 302
P ++ K D++S G+ +EL G P N +D +
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGE----PPN---------------SDLHPMR 223
Query: 303 VNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
V L+ + ++ CL + P RP+A ++L
Sbjct: 224 VLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLH 111
S+ +GSG V LA T AIKI +GS R + + E++IL
Sbjct: 13 MSKTLGSGACGEVKLA--FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
L+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A+
Sbjct: 71 LNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV 126
Query: 172 EYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 127 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--------- 174
Query: 229 XITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 175 -------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 28/225 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--------QVFKQELDILLHL 112
+ + IG GGF V+ RL+ D + AIK + D Q F++E+ I+ +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVV--AIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
+H NIVKL G + V+ E+VP G L +L ++ + W ++ + +A IE
Sbjct: 81 NHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 173 YLHERCTLHIVHGDIKASNILLEE-HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
Y+ + IVH D+++ NI L+ N +C A S + +
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCA-KVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + YT+ K D YSF +IL ++TG F
Sbjct: 195 PETIGAEEESYTE-----------KADTYSFAMILYTILTGEGPF 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHD 115
+++G GG S V+LAR + D A+K+ + +D F++E L+H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDV--AVKV-LRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQ 169
IV + + ++ EYV TL++ +H ++ P + AI Q
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQ 127
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ + H+ I+H D+K +NI++ K+ DFG A+ S
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG------------NS 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+T+ +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLH 111
S+ +GSG V LA T AIKI +GS R + + E++IL
Sbjct: 20 MSKTLGSGACGEVKLA--FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
L+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A+
Sbjct: 78 LNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV 133
Query: 172 EYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
+YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 134 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--------- 181
Query: 229 XITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 182 -------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHD 115
+++G GG S V+LAR + D A+K+ + +D F++E L+H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDV--AVKV-LRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQ 169
IV + + ++ EYV TL++ +H ++ P + AI Q
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQ 127
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ + H+ I+H D+K +NI++ K+ DFG A+ S
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG------------NS 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+T+ +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 59 QNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--FKQELDILLHLSH 114
Q+F + +G+G F V+L R ++ + RL QV E +L ++H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
I+++ G D + ++ +Y+ G L L +S + P A ++ A+EYL
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALEYL 122
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H + I++ D+K NILL+++ + K+ DFG AK +T
Sbjct: 123 HSK---DIIYRDLKPENILLDKNGHIKITDFGFAKY----------------VPDVT--Y 161
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
+ G+P Y P + T + D +SFG+++ E++ G F N
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGS---GGFSNVYLARLINDSTSTNGAIK-IHVGSDRLS 99
+S+K+Y + ++F ++IG G F VY A+ N TS A K I S+
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEEL 78
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+ + E+DIL H NIVKL+ + +L E+ G + + R L
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQ 136
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLX 218
+ Q A+ YLH+ I+H D+KA NIL + KL DFG SAK
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--------- 184
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAST-----KTDVYSFGVILLEL 269
I ++ IG+P + P + + K DV+S G+ L+E+
Sbjct: 185 -------NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 8 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 120
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 165
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 33/236 (13%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGS---GGFSNVYLARLINDSTSTNGAIK-IHVGSDRLS 99
+S+K+Y + ++F ++IG G F VY A+ N TS A K I S+
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEEL 78
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+ + E+DIL H NIVKL+ + +L E+ G + + R L
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQ 136
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLX 218
+ Q A+ YLH+ I+H D+KA NIL + KL DFG SAK
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--------- 184
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAST-----KTDVYSFGVILLEL 269
I ++ IG+P + P + + K DV+S G+ L+E+
Sbjct: 185 -------NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGS---GGFSNVYLARLINDSTSTNGAIK-IHVGSDRLS 99
+S+K+Y + ++F ++IG G F VY A+ N TS A K I S+
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEEL 78
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+ + E+DIL H NIVKL+ + +L E+ G + + R L
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQ 136
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLX 218
+ Q A+ YLH+ I+H D+KA NIL + KL DFG SAK
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--------- 184
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAST-----KTDVYSFGVILLEL 269
I ++ IG+P + P + + K DV+S G+ L+E+
Sbjct: 185 -------NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDNIVK 119
Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N+VK
Sbjct: 12 QTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---G 122
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+ I H DIK N+LL+E N K+ DFG L + K M G+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---MCGT 169
Query: 240 PGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
Y P L R + DV+S G++L ++ G
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 10 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 167
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 59 QNFSQVIGS-GGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDN 116
++F ++IG G F VY A+ N TS A K I S+ + + E+DIL H N
Sbjct: 11 EDFWEIIGELGDFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 68
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IVKL+ + +L E+ G + + R L + Q A+ YLH+
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHD 126
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
I+H D+KA NIL + KL DFG + + I ++
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTX--------------IQRRDSF 169
Query: 237 IGSPGYTDPHYLRTGMAST-----KTDVYSFGVILLEL 269
IG+P + P + + K DV+S G+ L+E+
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 42/244 (17%)
Query: 51 WDDVERFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKI-HVGSDRLS-------- 99
W + F Q + VIG G S V R ++ +T A+KI V ++RLS
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVV--RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR 143
Query: 100 QVFKQELDILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
+ ++E IL ++ H +I+ LI + L+F+ + G L + L L +
Sbjct: 144 EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEK 200
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+I L +A+ +LH +IVH D+K NILL++++ +L DF GFS +
Sbjct: 201 ETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDF-----GFSCHL-- 250
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAST------KTDVYSFGVILLELVTG 272
K + G+PGY P L+ M T + D+++ GVIL L+ G
Sbjct: 251 ---------EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
Query: 273 MEAF 276
F
Sbjct: 302 SPPF 305
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDNIVK 119
Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N+VK
Sbjct: 13 QTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---G 123
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+ I H DIK N+LL+E N K+ DFG L + K M G+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---MCGT 170
Query: 240 PGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
Y P L R + DV+S G++L ++ G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLHL 112
S+ +GSG V LA T AI+I +GS R + + E++IL L
Sbjct: 154 SKTLGSGACGEVKLA--FERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A++
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCK---LYFYQMLLAVQ 267
Query: 173 YLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 268 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----------- 313
Query: 230 ITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 314 -----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 365
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G + V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAYGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKI------HVGSDRLSQV---FKQELDILLHL 112
S+ +GSG V LA T AI+I +GS R + + E++IL L
Sbjct: 140 SKTLGSGACGEVKLA--FERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
+H I+K+ + D D ++L E + G L +K+ G R + + +Q+ A++
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCK---LYFYQMLLAVQ 253
Query: 173 YLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
YLHE I+H D+K N+LL EE K+ DFG +K+ ++++
Sbjct: 254 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----------- 299
Query: 230 ITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+ G+P Y P L T + D +S GVIL ++G F Q+
Sbjct: 300 -----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGS-----DRLSQVFKQELDILLHLSHDN 116
+V+G G F V+L + I+ S + A+K+ + DR+ K E DIL+ ++H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT--KMERDILVEVNHPF 87
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ---AIEY 173
IVKL + L+ +++ G L +L SK + F LA+ A+++
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDH 141
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
LH +L I++ D+K NILL+E + KL DFG +K K
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKA 183
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + + D +SFGV++ E++TG F
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G KKY+ RF + IG G VY A ++ +T AI+ L Q
Sbjct: 17 GDPKKKYT-----RFEK-----IGQGASGTVYTA--MDVATGQEVAIR----QMNLQQQP 60
Query: 103 KQELDI--LLHLSHDNIVKLIGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
K+EL I +L + + ++ Y D DE ++ EY+ G+L + + T
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--- 117
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
A+ + QA+E+LH ++H DIK+ NILL + KL DFG F + +
Sbjct: 118 -QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-----FCAQIT 168
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+K+ M+G+P + P + K D++S G++ +E++ G +
Sbjct: 169 PEQ----------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 278 PEN 280
EN
Sbjct: 219 NEN 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 61 FSQVIGSGGFSNVYLA---RLINDSTSTNGAIKIHVGSDRLSQV--FKQELDILLHLSHD 115
+ +G G F V A L + T A+K+ + S++ E ++L ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT---------------------PRSSK 154
+++KL G C +L+ EY G+L+ L + P
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + ++ A+Q++Q ++YL E + +VH D+ A NIL+ E K+ DF G S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDF-----GLSR 198
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V I + M I S L + +T++DV+SFGV+L E+VT
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIES--------LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHD 115
+++G GG S V+LAR + D A+K+ + +D F++E L+H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDV--AVKV-LRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQ 169
IV + + ++ EYV TL++ +H ++ P + AI Q
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQ 127
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ + H+ I+H D+K +NIL+ K+ DFG A+ S
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG------------NS 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+ + +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G KKY+ RF + IG G VY A ++ +T AI+ L Q
Sbjct: 16 GDPKKKYT-----RFEK-----IGQGASGTVYTA--MDVATGQEVAIR----QMNLQQQP 59
Query: 103 KQELDI--LLHLSHDNIVKLIGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
K+EL I +L + + ++ Y D DE ++ EY+ G+L + + T
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
A+ + QA+E+LH ++H DIK+ NILL + KL DFG F + +
Sbjct: 117 -QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-----FCAQIT 167
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+K+ M+G+P + P + K D++S G++ +E++ G +
Sbjct: 168 PEQ----------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 278 PEN 280
EN
Sbjct: 218 NEN 220
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 61 FSQVIGSGGFSNVYLA---RLINDSTSTNGAIKIHVGSDRLSQV--FKQELDILLHLSHD 115
+ +G G F V A L + T A+K+ + S++ E ++L ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT---------------------PRSSK 154
+++KL G C +L+ EY G+L+ L + P
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + ++ A+Q++Q ++YL E + +VH D+ A NIL+ E K+ DF G S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDF-----GLSR 198
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V I + M I S L + +T++DV+SFGV+L E+VT
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIES--------LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G KKY+ RF + IG G VY A ++ +T AI+ L Q
Sbjct: 16 GDPKKKYT-----RFEK-----IGQGASGTVYTA--MDVATGQEVAIR----QMNLQQQP 59
Query: 103 KQELDI--LLHLSHDNIVKLIGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
K+EL I +L + + ++ Y D DE ++ EY+ G+L + + T
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
A+ + QA+E+LH ++H DIK+ NILL + KL DFG F + +
Sbjct: 117 -QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-----FCAQIT 167
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+K+ M+G+P + P + K D++S G++ +E++ G +
Sbjct: 168 PEQ----------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 278 PEN 280
EN
Sbjct: 218 NEN 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGS-----DRLSQVFKQELDILLHLSHDN 116
+V+G G F V+L + I+ S + A+K+ + DR+ K E DIL+ ++H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT--KMERDILVEVNHPF 87
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IVKL + L+ +++ G L +L ++ + +A +LA A+++LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHLH- 143
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+L I++ D+K NILL+E + KL DFG +K K
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSF 186
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + + D +SFGV++ E++TG F
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGS-----DRLSQVFKQELDILLHLSHDN 116
+V+G G F V+L + I+ S + A+K+ + DR+ K E DIL+ ++H
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT--KMERDILVEVNHPF 88
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IVKL + L+ +++ G L +L ++ + +A +LA A+++LH
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHLH- 144
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+L I++ D+K NILL+E + KL DFG +K K
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSF 187
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + + D +SFGV++ E++TG F
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 61 FSQVIGSGGFSNVYLA---RLINDSTSTNGAIKIHVGSDRLSQV--FKQELDILLHLSHD 115
+ +G G F V A L + T A+K+ + S++ E ++L ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT---------------------PRSSK 154
+++KL G C +L+ EY G+L+ L + P
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
L + ++ A+Q++Q ++YL E + +VH D+ A NIL+ E K+ DF G S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDF-----GLSR 198
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
V I + M I S L + +T++DV+SFGV+L E+VT
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIES--------LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 55 ERFTQNFSQVIGSGGFSNV-----------YLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
ER+ N ++G G F V Y ++IN +++ N + +
Sbjct: 22 ERY--NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTIL 69
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+++L L H NI+KL +D ++ E G L +++ R S+ + I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARI 126
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
Q+ I Y+H+ +IVH D+K NILLE K CD G S+
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLES--KEKDCDIKIIDFGLSTCFQQN---- 177
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
TK IG+ Y P LR G K DV+S GVIL L++G F +N
Sbjct: 178 -------TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G KKY+ RF + IG G VY A ++ +T AI+ L Q
Sbjct: 16 GDPKKKYT-----RFEK-----IGQGASGTVYTA--MDVATGQEVAIR----QMNLQQQP 59
Query: 103 KQELDI--LLHLSHDNIVKLIGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
K+EL I +L + + ++ Y D DE ++ EY+ G+L + + T
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
A+ + QA+E+LH ++H DIK+ NILL + KL DFG F + +
Sbjct: 117 -QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-----FCAQIT 167
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+K+ M+G+P + P + K D++S G++ +E++ G +
Sbjct: 168 PEQ----------SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 278 PEN 280
EN
Sbjct: 218 NEN 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 55 ERFTQNFSQVIGSGGFSNV-----------YLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
ER+ N ++G G F V Y ++IN +++ N + +
Sbjct: 22 ERY--NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTIL 69
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+++L L H NI+KL +D ++ E G L +++ R S+ + I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARI 126
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
Q+ I Y+H+ +IVH D+K NILLE K CD G S+
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLES--KEKDCDIKIIDFGLSTCFQQN---- 177
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
TK IG+ Y P LR G K DV+S GVIL L++G F +N
Sbjct: 178 -------TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELD------ILLHLSHDN 116
+VIG+G F VY L ++S + + + + + KQ +D I+ SH N
Sbjct: 50 KVIGAGEFGEVYKGML--KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG L + L + + + + +A ++YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYL-- 163
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
++ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSR------VLEDDPEATYTTSGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+SFG+++ E++T
Sbjct: 216 -----WTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
++G G F+ VY A I+ T AIK+ + + Q + E+ I L H +I+
Sbjct: 17 NLLGKGSFAGVYRAESIH--TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSIL 74
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQAIEYLHE 176
+L Y +D + L+ E NG + L + P+ A F Q+ + YLH
Sbjct: 75 ELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK----PFSENEARHFMHQIITGMLYLHS 130
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
I+H D+ SN+LL ++N K+ DFG A K +
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLA---------------TQLKMPHEKHYTL 172
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P ++DV+S G + L+ G F
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 68/246 (27%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
N + +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWRNR----------MA 162
N+V L+G C ++ + E+ G L L + R+ +P+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 149 YSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLAR------------- 192
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFGVI 265
Y DP Y+R G A + ++DV+SFGV+
Sbjct: 193 -----------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 266 LLELVT 271
L E+ +
Sbjct: 236 LWEIFS 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 43/238 (18%)
Query: 54 VERFTQNFSQVIGSGGFSNV-----------YLARLINDSTSTNGAIKIHVGSDRLSQVF 102
ER+ N ++G G F V Y ++IN +++ N + +
Sbjct: 21 AERY--NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTI 68
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
+E+++L L H NI+KL +D ++ E G L +++ R S+ +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAAR 125
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
I Q+ I Y+H+ +IVH D+K NILLE K CD G S+
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLES--KEKDCDIKIIDFGLSTCFQQN--- 177
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
TK IG+ Y P LR G K DV+S GVIL L++G F +N
Sbjct: 178 --------TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDILLHLSHDNIV 118
+VIG G F V + ++ N T A+KI + L + F++E D+L++ I
Sbjct: 80 KVIGRGAFGEVAVVKMKN--TERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
L D + L+ +Y G L L + KLP ++ AI+ +H+
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQ-- 193
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
LH VH DIK N+LL+ + + +L DFGS KM V + + +
Sbjct: 194 -LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV---------------QSSVAV 237
Query: 238 GSPGYTDPHYLRT-----GMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P Y P L+ G + D +S GV + E++ G F E+ L G ++
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIM 294
Query: 293 N 293
N
Sbjct: 295 N 295
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 57 FTQNFSQVIGSGGFSNVYLARLINDSTSTN---GAIKIHVGSDRLSQVFKQELDILLHLS 113
+T + ++++G G F V+ + T+T A I + + K E+ ++ L
Sbjct: 89 YTVSKTEILGGGRFGQVHKC----EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD 144
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
H N+++L + +++ VL+ EYV G L +++ S L + + Q+ + I +
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRI--IDESYNLTELDTILFMKQICEGIRH 202
Query: 174 LHERCTLHIVHGDIKASNILL--EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
+H+ ++I+H D+K NIL + K+ DFG A+ L
Sbjct: 203 MHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK------------- 246
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSM 291
+ G+P + P + S TD++S GVI L++G+ F +N
Sbjct: 247 ---VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-------AET 296
Query: 292 LNDIADC 298
LN+I C
Sbjct: 297 LNNILAC 303
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 26/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDN 116
+ Q +G G V LA +N T A+KI V R + K+E+ I L+H+N
Sbjct: 9 DLVQTLGEGAAGEVQLA--VNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+VK G+ + + L EY G L +++ +P + QL + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I H DIK N+LL+E N K+ DFG L + K M
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFG----------LATVFRYNNRERLLNK---M 166
Query: 237 IGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y P L R + DV+S G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDST-STNGAIKIHVGSDR----LSQVFKQELDILLHLSHD 115
F + +G F VY L + A+ I D+ L + F+ E + L H
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKL-HGTPRS------------SKLPWRNRMA 162
N+V L+G ++F Y +G L E L +P S S L + +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+ Q+A +EYL + H+VH D+ N+L+ + LN K+ D G + +++
Sbjct: 150 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG 281
+ + +M G S +D++S+GV+L E+ + G++ +C +
Sbjct: 207 SLLPIRWMAPEAIMYGK-------------FSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253
Query: 282 Q 282
Q
Sbjct: 254 Q 254
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNG-AIKIHVGSDR----LSQVFKQELDILLHLSHD 115
F + +G F VY L + A+ I D+ L + F+ E + L H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKL-HGTPRS------------SKLPWRNRMA 162
N+V L+G ++F Y +G L E L +P S S L + +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+ Q+A +EYL + H+VH D+ N+L+ + LN K+ D G + +++
Sbjct: 133 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG 281
+ + +M G S +D++S+GV+L E+ + G++ +C +
Sbjct: 190 SLLPIRWMAPEAIMYGK-------------FSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 236
Query: 282 Q 282
Q
Sbjct: 237 Q 237
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGS--------------DRLSQVFKQELDILL 110
+GSG + V L + N + AIK+ S ++ + E+ +L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEK--AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 111 HLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQA 170
L H NI+KL +D+ L+ E+ G L E++ + + N M Q+
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK---QILSG 158
Query: 171 IEYLHERCTLHIVHGDIKASNILLEEH---LNCKLCDFGSAKMGFSSAVLXXXXXXXXXX 227
I YLH+ +IVH DIK NILLE LN K+ DFG + FS
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSF-FSKDY----------- 203
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
K +G+ Y P L+ + K DV+S GVI+ L+ G F +N Q
Sbjct: 204 ----KLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 29/221 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V + + T A+KI + S + K+E+ L H +I+KL
Sbjct: 19 LGVGTFGKVKIGE--HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ ++ EYV G L + + R ++ R Q+ A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHRHM-- 131
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+VH D+K N+LL+ H+N K+ DFG + M L GSP
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS----------------CGSP 174
Query: 241 GYTDPHYLRTGM-ASTKTDVYSFGVILLELVTGMEAFCPEN 280
Y P + + A + D++S GVIL L+ G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDILLHLSHDNIV 118
+VIG G F V + ++ N T A+KI + L + F++E D+L++ I
Sbjct: 96 KVIGRGAFGEVAVVKMKN--TERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
L D + L+ +Y G L L + KLP ++ AI+ +H+
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQ-- 209
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
LH VH DIK N+LL+ + + +L DFGS KM V + + +
Sbjct: 210 -LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV---------------QSSVAV 253
Query: 238 GSPGYTDPHYLRT-----GMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
G+P Y P L+ G + D +S GV + E++ G F E+ L G ++
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIM 310
Query: 293 N 293
N
Sbjct: 311 N 311
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G KKY+ RF + IG G VY A ++ +T AI+ L Q
Sbjct: 17 GDPKKKYT-----RFEK-----IGQGASGTVYTA--MDVATGQEVAIR----QMNLQQQP 60
Query: 103 KQELDI--LLHLSHDNIVKLIGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
K+EL I +L + + ++ Y D DE ++ EY+ G+L + + T
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--- 117
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
A+ + QA+E+LH ++H +IK+ NILL + KL DFG F + +
Sbjct: 118 -QIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFG-----FCAQIT 168
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+K+ M+G+P + P + K D++S G++ +E++ G +
Sbjct: 169 PEQ----------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 278 PEN 280
EN
Sbjct: 219 NEN 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHD 115
+++G GG S V+LAR + + A+K+ + +D F++E L+H
Sbjct: 16 LGEILGFGGMSEVHLARDLR--LHRDVAVKV-LRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQ 169
IV + + ++ EYV TL++ +H ++ P + AI Q
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQ 127
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ + H+ I+H D+K +NI++ K+ DFG A+ S
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG------------NS 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+T+ +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 29/221 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V + + T A+KI + S + K+E+ L H +I+KL
Sbjct: 19 LGVGTFGKVKIGE--HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ ++ EYV G L + + R ++ R Q+ A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHRHM-- 131
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+VH D+K N+LL+ H+N K+ DFG + M L GSP
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS----------------CGSP 174
Query: 241 GYTDPHYLRTGM-ASTKTDVYSFGVILLELVTGMEAFCPEN 280
Y P + + A + D++S GVIL L+ G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 126/311 (40%), Gaps = 50/311 (16%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G F VY + S A+K + F +E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTXTA 166
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSLAGSM 291
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 211
Query: 292 LNDIADCEATKVNELVDPRLAGDFDLDEARA----MLSIAALCLRQSPILRPSATQILHT 347
+ ++V EL L D+ ++ + + C + +P RPS +I
Sbjct: 212 ----PGIDPSQVYEL----LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 263
Query: 348 IK--HQISSIS 356
+ Q SSIS
Sbjct: 264 FETMFQESSIS 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 50/311 (16%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTXTA 166
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSLAGSM 291
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 211
Query: 292 LNDIADCEATKVNELVDPRLAGDFDLDEARA----MLSIAALCLRQSPILRPSATQILHT 347
+ ++V EL L D+ ++ + + C + +P RPS +I
Sbjct: 212 ----PGIDPSQVYEL----LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 263
Query: 348 IK--HQISSIS 356
+ Q SSIS
Sbjct: 264 FETMFQESSIS 274
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+G G F V L + + T A+K+ V + +E+ +L L H NI+
Sbjct: 38 RVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + +D+ L+ E G L +++ R S++ + I Q+ I Y+H+
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIRQVLSGITYMHKN- 151
Query: 179 TLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
IVH D+K N+LLE + N ++ DFG + +S +
Sbjct: 152 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--------------- 194
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
IG+ Y P L G K DV+S GVIL L++G F N
Sbjct: 195 -IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 52/319 (16%)
Query: 56 RFTQNFSQ--VIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHL 112
R+ +F + V+G G F V AR N S AIK I ++LS + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTIL-SEVXLLASL 59
Query: 113 SHDNIVKLIGYCDDRDEGV----------LLF---EYVPNGTLQEKLHGTPRSSKLP--W 157
+H +V+ +R V LF EY N TL + +H + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
R + Q+ +A+ Y+H + I+H ++K NI ++E N K+ DFG AK S +
Sbjct: 120 R----LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
IG+ Y L TG + K D YS G+I E +
Sbjct: 173 LKLDSQNLPGSS-DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST- 230
Query: 277 CPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
E +L L V DFD ++ + I L + P
Sbjct: 231 GXERVNILKKLRS-----------------VSIEFPPDFDDNKXKVEKKIIRLLIDHDPN 273
Query: 337 LRPSATQILHT----IKHQ 351
RP A +L++ +KHQ
Sbjct: 274 KRPGARTLLNSGWLPVKHQ 292
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHD 115
+++G GG S V+LAR + + A+K+ + +D F++E L+H
Sbjct: 16 LGEILGFGGMSEVHLARDLR--LHRDVAVKV-LRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQ 169
IV + + ++ EYV TL++ +H ++ P + AI Q
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQ 127
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ + H+ I+H D+K +NI++ K+ DFG A+ S
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG------------NS 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+T+ +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 56 RFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL-SQVFKQELDILLHLSH 114
R T F +V+GSG FS V+L + T A+K S + E+ +L + H
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVK--QRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+NIV L + L+ + V G L +++ ++ ++ + Q+ A++YL
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE---KDASLVIQQVLSAVKYL 122
Query: 175 HERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
HE IVH D+K N+L EE+ + DFG +KM + ++
Sbjct: 123 HENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTA----------- 167
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+PGY P L S D +S GVI L+ G F E
Sbjct: 168 -----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 50/311 (16%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTFTA 166
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSLAGSM 291
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 211
Query: 292 LNDIADCEATKVNELVDPRLAGDFDLDEARA----MLSIAALCLRQSPILRPSATQILHT 347
+ ++V EL L D+ ++ + + C + +P RPS +I
Sbjct: 212 ----PGIDPSQVYEL----LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 263
Query: 348 IK--HQISSIS 356
+ Q SSIS
Sbjct: 264 FETMFQESSIS 274
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 57 FTQNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS 113
F +NF +V IG G + VY AR + I++ ++ + +E+ +L L+
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
H NIVKL+ ++ L+FE++ +K + +P + FQL Q + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H ++H D+K N+L+ KL DFG A+ F V T +
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHE 170
Query: 234 VMMIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
V+ + Y P L ST D++S G I E+VT F
Sbjct: 171 VVTL---WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ L+H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 204 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 36/223 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+G G F V L + + T A+K+ V + +E+ +L L H NI+
Sbjct: 32 RVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + +D+ L+ E G L +++ R S++ + I Q+ I Y+H+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIRQVLSGITYMHKN- 145
Query: 179 TLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
IVH D+K N+LLE + N ++ DFG + +S +
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--------------- 188
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCP 278
IG+ Y P L G K DV+S GVIL L++G CP
Sbjct: 189 -IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG----CP 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 173
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 57 FTQNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS 113
F +NF +V IG G + VY AR + I++ ++ + +E+ +L L+
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
H NIVKL+ ++ L+FE++ +K + +P + FQL Q + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H ++H D+K N+L+ KL DFG A+ F V T +
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHE 170
Query: 234 VMMIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
V+ + Y P L ST D++S G I E+VT F
Sbjct: 171 VVTL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ L+H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 218 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 126
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 127 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTXTA 169
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 170 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI---HVGSD-RLSQVFKQELDILLHLSHDN 116
+++G GG S V+LAR + + A+K+ + D F++E L+H
Sbjct: 33 LGEILGFGGMSEVHLARDLR--LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 117 IVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQA 170
IV + + ++ EYV TL++ +H ++ P + AI QA
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQA 145
Query: 171 IEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXI 230
+ + H+ I+H D+K +NI++ K+ DFG A+ S +
Sbjct: 146 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG------------NSV 190
Query: 231 TKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
T+ +IG+ Y P R ++DVYS G +L E++TG F
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 41 IDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ 100
+D R++K+Y + +G GGF+ Y ++ G + + Q
Sbjct: 36 VDPRTMKRYMR----------GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ 85
Query: 101 VFKQELDILLHLSHDN--IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
K +I +H S DN +V G+ +D D ++ E +L E LH ++ P
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-- 142
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVL 217
Q Q ++YLH ++H D+K N+ L + ++ K+ DFG A K+ F
Sbjct: 143 EARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-- 197
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+P Y P L S + D++S G IL L+ G F
Sbjct: 198 --------------RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 173
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 41 IDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ 100
+D R++K+Y + +G GGF+ Y ++ G + + Q
Sbjct: 36 VDPRTMKRYMR----------GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ 85
Query: 101 VFKQELDILLHLSHDN--IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
K +I +H S DN +V G+ +D D ++ E +L E LH ++ P
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-- 142
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVL 217
Q Q ++YLH ++H D+K N+ L + ++ K+ DFG A K+ F
Sbjct: 143 EARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-- 197
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+P Y P L S + D++S G IL L+ G F
Sbjct: 198 --------------RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+G G F V L + + T A+K+ V + +E+ +L L H NI+
Sbjct: 55 RVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + +D+ L+ E G L +++ R S++ + I Q+ I Y+H+
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIRQVLSGITYMHKN- 168
Query: 179 TLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
IVH D+K N+LLE + N ++ DFG + +S +
Sbjct: 169 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--------------- 211
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
IG+ Y P L G K DV+S GVIL L++G F N
Sbjct: 212 -IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+G G F V + + ++ T A+KI + S + ++E+ L H +I+KL
Sbjct: 24 LGVGTFGKVKVGK--HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ ++ EYV G L + + ++ +L + + Q+ ++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
+VH D+K N+LL+ H+N K+ DFG + M L GSP
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS----------------CGSP 179
Query: 241 GYTDPHYLRTGM-ASTKTDVYSFGVILLELVTGMEAF 276
Y P + + A + D++S GVIL L+ G F
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 58/307 (18%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR---LSQVFKQELDILLHLSHDNIVKLI 121
IG G + V+ R N T AIK + S+ + ++ +E+ +L L H N+V L+
Sbjct: 11 IGEGSYGVVFKCR--NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+ L+FEY + L E L R +P +I +Q QA+ + H+ +
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHE-LDRYQRG--VPEHLVKSITWQTLQAVNFCHKH---N 122
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
+H D+K NIL+ +H KLCDFG A++ + +++G
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---DYYDDEVATRWYRSPELLVGDTQ 179
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF-------------------CPENGQ 282
Y P DV++ G + EL++G+ + P + Q
Sbjct: 180 YGPP-----------VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 228
Query: 283 LLTS---LAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
+ ++ +G + D D E EL P + + L + CL P R
Sbjct: 229 VFSTNQYFSGVKIPDPEDMEPL---ELKFPNI--------SYPALGLLKGCLHMDPTERL 277
Query: 340 SATQILH 346
+ Q+LH
Sbjct: 278 TCEQLLH 284
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+G G F V L + + T A+K+ V + +E+ +L L H NI+
Sbjct: 56 RVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + +D+ L+ E G L +++ R S++ + I Q+ I Y+H+
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIRQVLSGITYMHKN- 169
Query: 179 TLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
IVH D+K N+LLE + N ++ DFG + +S +
Sbjct: 170 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--------------- 212
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
IG+ Y P L G K DV+S GVIL L++G F N
Sbjct: 213 -IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 37/240 (15%)
Query: 56 RFTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDIL 109
RFT ++ + +G G FS V R + + + A KI + + +LS Q ++E I
Sbjct: 28 RFTDDYQLFEELGKGAFSVV--RRCVKKTPTQEYAAKI-INTKKLSARDHQKLEREARIC 84
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L H NIV+L + L+F+ V G L E + S+ + Q+ +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA---DASHCIHQILE 141
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSA--KMGFSSAVLXXXXXXX 224
++ ++H+ IVH D+K N+LL KL DFG A G A
Sbjct: 142 SVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG------ 192
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P LR D+++ GVIL L+ G F E+ L
Sbjct: 193 -----------FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKL 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 34/238 (14%)
Query: 56 RFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDIL 109
+F+ N+ + +G G FS V R ++ +T A KI + + +LS Q ++E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVV--RRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARIC 59
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L H NIV+L + L+F+ V G L E + S+ + + Q+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILE 116
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+I Y H IVH ++K N+LL KL DFG A S
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG------- 166
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P L+ S D+++ GVIL L+ G F E+ L
Sbjct: 167 ---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 59 QNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHL 112
Q+F +VIG G ++ V L RL T A+K+ V D + E +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRL--KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 113 S-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
S H +V L + EYV G L + R KLP + + +++ A+
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLAL 123
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
YLHER I++ D+K N+LL+ + KL D+G K G
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------D 165
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P LR D ++ GV++ E++ G F
Sbjct: 166 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL----SQVFKQELDILLHLSHDNIV 118
+VIG G F V L R + ++ A+K+ + + S F +E DI+ + +V
Sbjct: 81 KVIGRGAFGEVQLVR--HKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L D ++ EY+P G L + K W F A+ + L
Sbjct: 139 QLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAK-----FYTAEVVLALDAIH 191
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
++ ++H D+K N+LL++H + KL DFG+ KM + V +
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA---------------V 236
Query: 238 GSPGYTDPHYLRT----GMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P L++ G + D +S GV L E++ G F
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 56 RFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDIL 109
+F+ N+ + +G G FS V R ++ +T A KI + + +LS Q ++E I
Sbjct: 2 KFSDNYDVKEELGKGAFSVV--RRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARIC 58
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L H NIV+L + L+F+ V G L E + S+ + Q+ +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQILE 115
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+I Y H IVH ++K N+LL KL DFG A S
Sbjct: 116 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG------- 165
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTS 286
G+PGY P L+ S D+++ GVIL L+ G F E+ L +
Sbjct: 166 ---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 34/238 (14%)
Query: 56 RFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDIL 109
+F+ N+ + +G G FS V R ++ +T A KI + + +LS Q ++E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVV--RRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARIC 59
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L H NIV+L + L+F+ V G L E + S+ + Q+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA---DASHCIQQILE 116
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+I Y H IVH ++K N+LL KL DFG A S
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG------- 166
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P L+ S D+++ GVIL L+ G F E+ L
Sbjct: 167 ---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 173
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 173
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 36/315 (11%)
Query: 54 VERFTQNFSQVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGSDRLSQVFKQELDILLHL 112
+ R +VIGSG + V A I + + ++ K E+ +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQC 70
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-----GTPRSSKLPWRNRMAIAFQL 167
H NIV +DE L+ + + G++ + + G +S L I ++
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 168 AQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXX 227
+ +EYLH+ +H D+KA NILL E + ++ DFG SA L
Sbjct: 131 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFG------VSAFLATGGDITRNK 181
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF--CPENGQLL 284
T +G+P + P + K D++SFG+ +EL TG + P L+
Sbjct: 182 VRKT----FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM 237
Query: 285 TSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQI 344
+L ND E ++ + + F R M+S LCL++ P RP+A ++
Sbjct: 238 LTLQ----NDPPSLETGVQDKEMLKKYGKSF-----RKMIS---LCLQKDPEKRPTAAEL 285
Query: 345 L-HTIKHQISSISFL 358
L H + + FL
Sbjct: 286 LRHKFFQKAKNKEFL 300
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 125
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 168
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 129
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 130 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 172
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 138 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 195 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTXTA 173
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 41 IDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ 100
+D R++K+Y + +G GGF+ Y ++ G + + Q
Sbjct: 20 VDPRTMKRYMR----------GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ 69
Query: 101 VFKQELDILLHLSHDN--IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
K +I +H S DN +V G+ +D D ++ E +L E LH ++ P
Sbjct: 70 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-- 126
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVL 217
Q Q ++YLH ++H D+K N+ L + ++ K+ DFG A K+ F
Sbjct: 127 EARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-- 181
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+P Y P L S + D++S G IL L+ G F
Sbjct: 182 --------------RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLS-HDNI 117
+VIG G ++ V L RL T A+K+ V D + E + S H +
Sbjct: 26 RVIGRGSYAKVLLVRL--KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
V L + EYV G L + R KLP + + +++ A+ YLHER
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHER 140
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
I++ D+K N+LL+ + KL D+G K G
Sbjct: 141 G---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSXFC 182
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P LR D ++ GV++ E++ G F
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 128 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 170
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 59 QNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHL 112
Q+F +VIG G ++ V L RL T A+K+ V D + E +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRL--KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 113 S-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
S H +V L + EYV G L + R KLP + + +++ A+
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLAL 119
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXIT 231
YLHER I++ D+K N+LL+ + KL D+G K G
Sbjct: 120 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------D 161
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P LR D ++ GV++ E++ G F
Sbjct: 162 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+GSG F V L + + A+K+ F QE ++ LSH +VK G C
Sbjct: 16 LGSGQFGVVKLGKW---KGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
++ EY+ NG L L + L + + + + + + +L +H
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 185 GDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTD 244
D+ A N L++ L K+ DFG + + TK + +P
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG---------TKFPVKWSAPEVF- 177
Query: 245 PHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVN 304
HY + S+K+DV++FG+++ E+ + G++ L N + ++ +
Sbjct: 178 -HYFKY---SSKSDVWAFGILMWEVFS--------LGKMPYDL---YTNSEVVLKVSQGH 222
Query: 305 ELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIK 349
L P LA D + I C + P RP+ Q+L +I+
Sbjct: 223 RLYRPHLASD-------TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 79
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 138
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 139 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 181
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 41 IDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ 100
+D R++K+Y + +G GGF+ Y ++ G + + Q
Sbjct: 36 VDPRTMKRYMR----------GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ 85
Query: 101 VFKQELDILLHLSHDN--IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
K +I +H S DN +V G+ +D D ++ E +L E LH ++ P
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-- 142
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVL 217
Q Q ++YLH ++H D+K N+ L + ++ K+ DFG A K+ F
Sbjct: 143 EARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-- 197
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + G+P Y P L S + D++S G IL L+ G F
Sbjct: 198 --------------RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++ T
Sbjct: 128 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 170
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 203 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+GSG + V L R + T AIKI V + S++ +E+ +L L H NI+KL
Sbjct: 45 LGSGAYGEVLLCR--DKVTHVERAIKIIRKTSVSTSSNSKLL-EEVAVLKLLDHPNIMKL 101
Query: 121 IGYCDDRDEGVLLFEYVPNGTL-QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
+ +D+ L+ E G L E +H K + I Q+ + YLH+
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH-- 155
Query: 180 LHIVHGDIKASNILLEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+IVH D+K N+LLE K+ DFG SAV K
Sbjct: 156 -NIVHRDLKPENLLLESKEKDALIKIVDFG------LSAVFENQ----------KKMKER 198
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+G+ Y P LR K DV+S GVIL L+ G F + Q
Sbjct: 199 LGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQ 243
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 204 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH----VGSDRLSQVFKQEL 106
+D++ ++ + + IG+GGF+ V LA I T AIKI +GSD L ++ K E+
Sbjct: 5 YDELLKYYE-LHETIGTGGFAKVKLACHI--LTGEMVAIKIMDKNTLGSD-LPRI-KTEI 59
Query: 107 DILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+ L +L H +I +L + ++ ++ EY P G L + + R S+ R + Q
Sbjct: 60 EALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETR---VVFRQ 116
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG--SAKMGFSSAVLXXXXXXX 224
+ A+ Y+H + H D+K N+L +E+ KL DFG + G L
Sbjct: 117 IVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT----- 168
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
GS Y P ++ ++ DV+S G++L L+ G F +N
Sbjct: 169 -----------CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 36/245 (14%)
Query: 50 SW----DDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL---SQVF 102
SW +D+++ + F + +G+G FS V LA +T A+K + L
Sbjct: 12 SWKKQAEDIKKIFE-FKETLGTGAFSEVVLAE--EKATGKLFAVKC-IPKKALKGKESSI 67
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
+ E+ +L + H+NIV L + + L+ + V G L +++ ++ ++
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE---KDAST 124
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXX 219
+ Q+ A+ YLH + IVH D+K N+L +E + DFG +KM V+
Sbjct: 125 LIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST 181
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPE 279
G+PGY P L S D +S GVI L+ G F E
Sbjct: 182 A----------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 225
Query: 280 NGQLL 284
N L
Sbjct: 226 NDSKL 230
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 163 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 220 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 153 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 210 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 203 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTN----GAIKIHVGSDRLSQVFKQELDILLHLS---HDNI 117
IG G + VY AR D S + ++++ G + L +E+ +L L H N+
Sbjct: 12 IGVGAYGTVYKAR---DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 118 VKLIGYC----DDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
V+L+ C DR+ V L+FE+V + L+ L P LP + Q + ++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLD 126
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
+LH C IVH D+K NIL+ KL DFG A++ L
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP------------- 170
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++ + Y P L +T D++S G I E+ FC
Sbjct: 171 ---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 43/240 (17%)
Query: 58 TQNFSQV--IGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDR-LSQVFKQELDILLHLS 113
+ F Q+ +G+G ++ VY + +N +T A+K + + S+ +E+ ++ L
Sbjct: 4 SSQFKQLEKLGNGTYATVY--KGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQ----EKLHGTPRSSKLPWRNRMA-IAFQLA 168
H+NIV+L ++ L+FE++ N + + TPR +L N + +QL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLEL---NLVKYFQWQLL 118
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM------GFSSAVLXXXXX 222
Q + + HE I+H D+K N+L+ + KL DFG A+ FSS V+
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+++GS Y ST D++S G IL E++TG F N +
Sbjct: 176 APD---------VLMGSRTY-----------STSIDIWSCGCILAEMITGKPLFPGTNDE 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++
Sbjct: 128 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK----- 179
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 180 ---------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 126
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H D+ A N L+ E+ K+ DFG +++
Sbjct: 127 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK----- 178
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 179 ---------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 54 VERFTQNFSQVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGSDRLSQVFKQELDILLHL 112
+ R +VIGSG + V A I + + ++ K E+ +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQC 65
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-----GTPRSSKLPWRNRMAIAFQL 167
H NIV +DE L+ + + G++ + + G +S L I ++
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 168 AQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXX 227
+ +EYLH+ +H D+KA NILL E + ++ DFG SA L
Sbjct: 126 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFG------VSAFLATGGDITRNK 176
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF--CPENGQLL 284
T +G+P + P + K D++SFG+ +EL TG + P L+
Sbjct: 177 VRKT----FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM 232
Query: 285 TSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQI 344
+L ND E ++ + + F R M+S LCL++ P RP+A ++
Sbjct: 233 LTLQ----NDPPSLETGVQDKEMLKKYGKSF-----RKMIS---LCLQKDPEKRPTAAEL 280
Query: 345 L 345
L
Sbjct: 281 L 281
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 218 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + +
Sbjct: 164 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 221 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTN-GAIKIHVGS-----DRLSQVFKQELDILLHLSHDN 116
+V+G G F V+L R + S + A+K+ + DR+ K E DIL ++H
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT--KMERDILADVNHPF 91
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ---AIEY 173
+VKL + L+ +++ G L +L SK + F LA+ +++
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALGLDH 145
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
LH +L I++ D+K NILL+E + KL DFG +K K
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE---------------KKA 187
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+ Y P + S D +S+GV++ E++TG F
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 34/234 (14%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQ--ELDILL 110
+V R + +G G F VY ++ S N + V L +V+ + ELD L+
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 111 H------LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNR 160
+H NIV+ IG +L E + G L+ L T PR S+ L +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVL 217
+ +A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 215 RKGGCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 34/238 (14%)
Query: 56 RFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDIL 109
+F+ N+ + +G G FS V R ++ +T A KI + + +LS Q ++E I
Sbjct: 26 KFSDNYDVKEELGKGAFSVV--RRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARIC 82
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L H NIV+L + L+F+ V G L E + S+ + + Q+ +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILE 139
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+I Y H IVH ++K N+LL KL DFG A S
Sbjct: 140 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG------- 189
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P L+ S D+++ GVIL L+ G F E+ L
Sbjct: 190 ---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 238
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 204 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 85/217 (39%), Gaps = 24/217 (11%)
Query: 63 QVIGSGGFSNVYLARLIN-DSTSTNGAIKIH-VGSDRLSQVFKQELDILLHLS-HDNIVK 119
+VIG G ++ V L RL D +K V D + E + S H +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L + EYV G L + R KLP + + +++ A+ YLHER
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHERG- 173
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
I++ D+K N+LL+ + KL D+G K G G+
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGT 216
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P Y P LR D ++ GV++ E++ G F
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + ++
Sbjct: 173 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 230 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV----FKQELDILLHLSHDNIV 118
+VIG G F V + +L N A+KI + L + F++E D+L++ I
Sbjct: 80 KVIGRGAFGEVAVVKLKN--ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
L D + L+ +Y G L L + +LP ++ AI+ +H+
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLAEMVIAIDSVHQ-- 193
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
LH VH DIK NIL++ + + +L DFGS + + + +G
Sbjct: 194 -LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--------------QSSVAVG 238
Query: 239 SPGYTDPHYLRT-----GMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLN 293
+P Y P L+ G + D +S GV + E++ G F E+ L G ++N
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMN 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTN----GAIKIHVGSDRLSQVFKQELDILLHLS---HDNI 117
IG G + VY AR D S + ++++ G + L +E+ +L L H N+
Sbjct: 12 IGVGAYGTVYKAR---DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 118 VKLIGYC----DDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
V+L+ C DR+ V L+FE+V + L+ L P LP + Q + ++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLD 126
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
+LH C IVH D+K NIL+ KL DFG A++ L
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP------------- 170
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++ + Y P L +T D++S G I E+ FC
Sbjct: 171 ---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTN----GAIKIHVGSDRLSQVFKQELDILLHLS---HDNI 117
IG G + VY AR D S + ++++ G + L +E+ +L L H N+
Sbjct: 12 IGVGAYGTVYKAR---DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 118 VKLIGYC----DDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
V+L+ C DR+ V L+FE+V + L+ L P LP + Q + ++
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLD 126
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
+LH C IVH D+K NIL+ KL DFG A++ L
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP------------- 170
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
++ + Y P L +T D++S G I E+ FC
Sbjct: 171 ---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 53 DVERFTQNFSQVIGSGGFSNVY---LARLINDSTSTNGAIKI--HVGSDRLSQVFKQELD 107
+V R + +G G F VY ++ + ND + A+K V S++ F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGT-PRSSK---LPWRNRMAI 163
I+ +H NIV+ IG +L E + G L+ L T PR S+ L + + +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXX 220
A +A +YL E H +H DI A N LL K+ DFG A+ + +
Sbjct: 187 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M G+ ++KTD +SFGV+L E+ +
Sbjct: 244 GCAMLPVKWMPPEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 52 DDVERFTQNFSQV--IGSGGFSNVYLARLINDSTSTNG--AIKIHVGSDRLSQVFKQELD 107
D + R Q + V IG G + V+ AR + + +++ G + + +E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 108 ILLHLS---HDNIVKLIGYC-----DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+L HL H N+V+L C D + L+FE+V + L L P +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTET 121
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM-GFSSAVLX 218
+ FQL + +++LH +VH D+K NIL+ KL DFG A++ F A
Sbjct: 122 IKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
+T V+ + Y P L +T D++S G I E+
Sbjct: 176 -----------LTSVVVTL---WYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 52 DDVERFTQNFSQV--IGSGGFSNVYLARLINDSTSTNG--AIKIHVGSDRLSQVFKQELD 107
D + R Q + V IG G + V+ AR + + +++ G + + +E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 108 ILLHLS---HDNIVKLIGYC-----DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+L HL H N+V+L C D + L+FE+V + L L P +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTET 121
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM-GFSSAVLX 218
+ FQL + +++LH +VH D+K NIL+ KL DFG A++ F A
Sbjct: 122 IKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
+T V+ + Y P L +T D++S G I E+
Sbjct: 176 -----------LTSVVVTL---WYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 52 DDVERFTQNFSQV--IGSGGFSNVYLARLINDSTSTNG--AIKIHVGSDRLSQVFKQELD 107
D + R Q + V IG G + V+ AR + + +++ G + + +E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 108 ILLHLS---HDNIVKLIGYC-----DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+L HL H N+V+L C D + L+FE+V + L L P +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTET 121
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM-GFSSAVLX 218
+ FQL + +++LH +VH D+K NIL+ KL DFG A++ F A
Sbjct: 122 IKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
+T V+ + Y P L +T D++S G I E+
Sbjct: 176 -----------LTSVVVTL---WYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 99 SQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVL--LFEYVPNGTLQEKL-HGTPRSSKL 155
Q+ E+++L L H NIV+ DR L + EY G L + GT L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 156 PWRNRMAIAFQLAQAIEYLHERCT--LHIVHGDIKASNILLEEHLNCKLCDFGSAKM--- 210
+ + QL A++ H R ++H D+K +N+ L+ N KL DFG A++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 211 --GFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE 268
F+ A +G+P Y P + + K+D++S G +L E
Sbjct: 169 DTSFAKA--------------------FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 269 LVTGMEAF 276
L M F
Sbjct: 209 LCALMPPF 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELD--------------- 107
Q++ S G YLA I + G + I QV +++D
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV 94
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQL 167
I+ HDN+V + DE ++ E++ G L + + T ++ + +
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIATVCLSV 150
Query: 168 AQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXX 227
+A+ YLH + ++H DIK+ +ILL KL DFG F + V
Sbjct: 151 LRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFG-----FCAQV----------S 192
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPE 279
+ K+ ++G+P + P + T+ D++S G++++E++ G + E
Sbjct: 193 KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 165
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 166 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 165
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 166 TL---WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 169
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 170 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 42 DGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV 101
D RS K+ VER G G F V L + ST + AIK + R
Sbjct: 15 DERSRKEMDRFQVERMA-------GQGTFGTVQLGK--EKSTGMSVAIKKVIQDPRFRNR 65
Query: 102 FKQELDILLHLSHDNIVKL------IGYCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSK 154
Q + L L H NIV+L +G D RD + ++ EYVP+ TL R
Sbjct: 66 ELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQV 124
Query: 155 LPWRNRMAI-AFQLAQAIEYLHERCTLHIVHGDIKASNILLEE-HLNCKLCDFGSAKMGF 212
P + + FQL ++I LH ++++ H DIK N+L+ E KLCDFGSAK
Sbjct: 125 APPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 213 SSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGM-ASTKTDVYSFGVILLELVT 271
S V I S Y P + +T D++S G I E++
Sbjct: 184 PS----------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227
Query: 272 GMEAFCPEN--GQL 283
G F +N GQL
Sbjct: 228 GEPIFRGDNSAGQL 241
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 166
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 167 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 164
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 165 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G+GGF Y+ R I+ T AIK S + + + E+ I+ L+H N+V
Sbjct: 22 LGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 123 YCD------DRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
D D +L EY G L++ L+ L + ++ A+ YLHE
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 177 RCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
I+H D+K NI+L+ + L K+ D G AK +
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-------------- 182
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCP 278
+G+ Y P L + D +SFG + E +TG F P
Sbjct: 183 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 165
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 166 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+G+GGF Y+ R I+ T AIK S + + + E+ I+ L+H N+V
Sbjct: 23 LGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 123 YCD------DRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
D D +L EY G L++ L+ L + ++ A+ YLHE
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 177 RCTLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
I+H D+K NI+L+ + L K+ D G AK +
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-------------- 183
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCP 278
+G+ Y P L + D +SFG + E +TG F P
Sbjct: 184 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 164
Query: 236 MIGSPGYTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 165 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 165
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 166 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+G G F V L + + T A+K+ V + +E+ +L L H NI
Sbjct: 32 RVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + +D+ L+ E G L +++ R S++ + I Q+ I Y H+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIRQVLSGITYXHKN- 145
Query: 179 TLHIVHGDIKASNILLE---EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
IVH D+K N+LLE + N ++ DFG + +S K
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----------------KXKD 187
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
IG+ Y P L G K DV+S GVIL L++G F N
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 59 QNFSQV--IGSGGFSNVYLARLINDSTSTNGA---IKIHVGSDRLSQVFKQELDILLHLS 113
+NF +V IG G + VY AR N T A I++ ++ + +E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN 60
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
H NIVKL+ ++ L+FE++ +K + +P + FQL Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H ++H D+K N+L+ KL DFG A+ F V T +
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHE 163
Query: 234 VMMIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
V+ + Y P L ST D++S G I E+VT F
Sbjct: 164 VVTL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 59 QNFSQV--IGSGGFSNVYLARLINDSTSTNGA---IKIHVGSDRLSQVFKQELDILLHLS 113
+NF +V IG G + VY AR N T A I++ ++ + +E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN 59
Query: 114 HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
H NIVKL+ ++ L+FE++ +K + +P + FQL Q + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H ++H D+K N+L+ KL DFG A+ F V T +
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHE 162
Query: 234 VMMIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
V+ + Y P L ST D++S G I E+VT F
Sbjct: 163 VVTL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 72/250 (28%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 115 D-NIVKLIGYCDDRDEGVLLF-EYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C +++ E+ G L L + R+ +P++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR--------- 187
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYS 261
Y DP Y+R G A + ++DV+S
Sbjct: 188 ---------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 262 FGVILLELVT 271
FGV+L E+ +
Sbjct: 227 FGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 72/250 (28%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 32 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWRNR------------ 160
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 161 --MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 151 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR--------- 198
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYS 261
Y DP Y+R G A + ++DV+S
Sbjct: 199 ---------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 237
Query: 262 FGVILLELVT 271
FGV+L E+ +
Sbjct: 238 FGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 72/250 (28%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 126
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 186 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR--------- 233
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYS 261
Y DP Y+R G A + ++DV+S
Sbjct: 234 ---------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 272
Query: 262 FGVILLELVT 271
FGV+L E+ +
Sbjct: 273 FGVLLWEIFS 282
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 37/212 (17%)
Query: 65 IGSGGFSNVYLA--RLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
I GG +YLA R +N + +H G + E L + H +IV++
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 123 YCDDRDE-----GVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ + D G ++ EYV +L+ + KLP +A ++ A+ YLH
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRS-----KGQKLPVAEAIAYLLEILPALSYLH-- 199
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
++ +V+ D+K NI+L E KL D G+ I +
Sbjct: 200 -SIGLVYNDLKPENIMLTEE-QLKLIDLGAVS-------------------RINSFGYLY 238
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
G+PG+ P +RTG + TD+Y+ G L L
Sbjct: 239 GTPGFQAPEIVRTG-PTVATDIYTVGRTLAAL 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 72/250 (28%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 115 D-NIVKLIGYCDDRDEGVLLF-EYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C +++ E+ G L L + R+ +P++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR--------- 187
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYS 261
Y DP Y+R G A + ++DV+S
Sbjct: 188 ---------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 262 FGVILLELVT 271
FGV+L E+ +
Sbjct: 227 FGVLLWEIFS 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 152 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 198
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 199 -DIHHIDXXKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 72/250 (28%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR--------- 196
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYS 261
Y DP Y+R G A + ++DV+S
Sbjct: 197 ---------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 262 FGVILLELVT 271
FGV+L E+ +
Sbjct: 236 FGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 68/246 (27%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
N + +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWRNR----------MA 162
N+V L+G C ++ + E+ G L L + R+ +P+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+FQ+A+ +E+L R +H D+ A NILL E K+ DFG A+
Sbjct: 149 YSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLAR------------- 192
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFGVI 265
Y DP Y+R G A + ++DV+SFGV+
Sbjct: 193 -----------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 266 LLELVT 271
L E+ +
Sbjct: 236 LWEIFS 241
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 56/271 (20%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL-SHDNIVKLI 121
+ IG G +S R ++ +T+ A+K+ D+ + +E++ILL H NI+ L
Sbjct: 33 ETIGVGSYSEC--KRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
DD L+ E + G L +K+ R R + + + +EYLH +
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVEYLHSQG--- 141
Query: 182 IVHGDIKASNIL-LEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
+VH D+K SNIL ++E N ++CDFG AK + + ++
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-------------------LRAENGLL 182
Query: 238 GSPGYT----DPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC------PENGQLLT-- 285
+P YT P L+ D++S G++L ++ G F PE ++LT
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRI 240
Query: 286 -----SLAGSMLNDIADCEATKVNEL--VDP 309
+L+G N +++ V+++ VDP
Sbjct: 241 GSGKFTLSGGNWNTVSETAKDLVSKMLHVDP 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 43/232 (18%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD-NIVKLI 121
+++G+G + VY R + T AIK+ + + KQE+++L SH NI
Sbjct: 30 ELVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 122 GYCDDR------DEGVLLFEYVPNGTLQEKLHGTPRSS-KLPWRNRMAIAF---QLAQAI 171
G + D+ L+ E+ G++ + + T ++ K W IA+ ++ + +
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILRGL 142
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXI 230
+LH+ ++H DIK N+LL E+ KL DFG SA++ + +
Sbjct: 143 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT----------------V 183
Query: 231 TKQVMMIGSPGYTDPHYLR-----TGMASTKTDVYSFGVILLELVTGMEAFC 277
++ IG+P + P + K+D++S G+ +E+ G C
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 20/183 (10%)
Query: 99 SQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVL--LFEYVPNGTLQEKL-HGTPRSSKL 155
Q+ E+++L L H NIV+ DR L + EY G L + GT L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 156 PWRNRMAIAFQLAQAIEYLHERCT--LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
+ + QL A++ H R ++H D+K +N+ L+ N KL DFG A++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
+G+P Y P + + K+D++S G +L EL M
Sbjct: 169 DTSFAKT---------------FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 274 EAF 276
F
Sbjct: 214 PPF 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 56/271 (20%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS-HDNIVKLI 121
+ IG G +S R ++ +T+ A+K+ D+ + +E++ILL H NI+ L
Sbjct: 33 ETIGVGSYSEC--KRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
DD L+ E + G L +K+ R R + + + +EYLH +
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVEYLHSQG--- 141
Query: 182 IVHGDIKASNIL-LEEHLN---CKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
+VH D+K SNIL ++E N ++CDFG AK + + ++
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-------------------LRAENGLL 182
Query: 238 GSPGYT----DPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC------PENGQLLT-- 285
+P YT P L+ D++S G++L ++ G F PE ++LT
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRI 240
Query: 286 -----SLAGSMLNDIADCEATKVNEL--VDP 309
+L+G N +++ V+++ VDP
Sbjct: 241 GSGKFTLSGGNWNTVSETAKDLVSKMLHVDP 271
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 152 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 198
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 199 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 152 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 198
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 199 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL----SQVFKQELDILLHLSHDNIV 118
+VIG G F V L R + ST A+K+ + + S F +E DI+ + +V
Sbjct: 80 KVIGRGAFGEVQLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 119 KLI-GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+L + DDR ++ EY+P G L + K W F A+ + L
Sbjct: 138 QLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEK--W-----ARFYTAEVVLALDAI 189
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMM 236
++ +H D+K N+LL++ + KL DFG+ KM V +
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------------RCDTA 234
Query: 237 IGSPGYTDPHYLRT----GMASTKTDVYSFGVILLELVTGMEAF 276
+G+P Y P L++ G + D +S GV L E++ G F
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL----SQVFKQELDILLHLSHDNIV 118
+VIG G F V L R + ST A+K+ + + S F +E DI+ + +V
Sbjct: 75 KVIGRGAFGEVQLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 119 KLI-GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+L + DDR ++ EY+P G L + K W F A+ + L
Sbjct: 133 QLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEK--W-----ARFYTAEVVLALDAI 184
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMM 236
++ +H D+K N+LL++ + KL DFG+ KM V +
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------------RCDTA 229
Query: 237 IGSPGYTDPHYLRT----GMASTKTDVYSFGVILLELVTGMEAF 276
+G+P Y P L++ G + D +S GV L E++ G F
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 145 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 191
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 192 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 273
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 332
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H ++ A N L+ E+ K+ DFG +++ T
Sbjct: 333 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 375
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 152 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 198
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 199 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 137 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 183
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 184 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 144 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 190
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 191 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 141 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 187
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 188 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 28/238 (11%)
Query: 44 RSVKKYSWDDVERFTQNFSQVI---GSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLS 99
R +KK D + + + V+ G G + +VY A I+ T AIK + V SD L
Sbjct: 13 RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKA--IHKETGQIVAIKQVPVESD-LQ 69
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
++ K E+ I+ ++VK G + ++ EY G++ + + R+ L
Sbjct: 70 EIIK-EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL--RNKTLTEDE 126
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
I + +EYLH + +H DIKA NILL + KL DFG A
Sbjct: 127 IATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ--------- 174
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+ K+ +IG+P + P ++ + D++S G+ +E+ G +
Sbjct: 175 ------LTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE+V + L+ + + + +P + FQL Q + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCH 119
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V T +V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPV-----------RTYTHEVV 164
Query: 236 MIGSPGYTDPH-YLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ Y P L ST D++S G I E+VT F
Sbjct: 165 TL---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG A+ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLAR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRL----SQVFKQELDILLHLSHDNIV 118
+VIG G F V L R + ST A+K+ + + S F +E DI+ + +V
Sbjct: 80 KVIGRGAFGEVQLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 119 KLI-GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+L + DDR ++ EY+P G L + K W F A+ + L
Sbjct: 138 QLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEK--W-----ARFYTAEVVLALDAI 189
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMM 236
++ +H D+K N+LL++ + KL DFG+ KM V +
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------------RCDTA 234
Query: 237 IGSPGYTDPHYLRT----GMASTKTDVYSFGVILLELVTGMEAF 276
+G+P Y P L++ G + D +S GV L E++ G F
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE+V +K + +P + FQL Q + + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 177
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 178 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
N + +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWRNR------------ 160
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 161 -MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 150 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR-----DIXKD 201
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M P + + + ++DV+SFGV+L E+ +
Sbjct: 202 PDXVRKGDARLPLKWMA--------PETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNG-AIKIHVG--SDRLSQVFKQELDILLHLSHDNIVK 119
+VIG+G F V RL + AIK G ++R + F E I+ H NI++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G + ++L E++ NG L L + + + +A + YL E
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGMLRGIASGMRYLAE--- 136
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+ VH D+ A NIL+ +L CK+ DFG ++ L + ++ +
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRF------LEENSSDPTETSSLGGKIPI--- 187
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +D +S+G+++ E+++
Sbjct: 188 -RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 20/183 (10%)
Query: 99 SQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVL--LFEYVPNGTLQEKL-HGTPRSSKL 155
Q+ E+++L L H NIV+ DR L + EY G L + GT L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 156 PWRNRMAIAFQLAQAIEYLHERCT--LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
+ + QL A++ H R ++H D+K +N+ L+ N KL DFG A++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--- 165
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGM 273
K+ +G+P Y P + + K+D++S G +L EL M
Sbjct: 166 ----------LNHDEDFAKE--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 274 EAF 276
F
Sbjct: 214 PPF 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 71/314 (22%)
Query: 55 ERFTQNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLH 111
+RF +F ++ IGSGGF V+ A+ I+ T +K + ++ ++E+ L
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAK 60
Query: 112 LSHDNIVKLIGYCD-------------DRDEGVLLF---EYVPNGTLQEKLHGTPRSSKL 155
L H NIV G D R + LF E+ GTL++ + R KL
Sbjct: 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKL 119
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ + Q+ + ++Y+H + +++ D+K SNI L + K+ DFG
Sbjct: 120 DKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFG--------- 167
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME- 274
K+ G+ Y P + + + D+Y+ G+IL EL+ +
Sbjct: 168 -------LVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT 220
Query: 275 AFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQS 334
AF E + T L +++DI FD E + + L +
Sbjct: 221 AF--ETSKFFTDLRDGIISDI-------------------FDKKEKTLLQKL----LSKK 255
Query: 335 PILRPSATQILHTI 348
P RP+ ++IL T+
Sbjct: 256 PEDRPNTSEILRTL 269
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 63/330 (19%)
Query: 51 WDDVERFTQN---FSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VF 102
+D F +N F + +G+G F V A LI + A+K+ S L++
Sbjct: 14 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL 73
Query: 103 KQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
EL +L +L +H NIV L+G C +++ EY G L L R S + +
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSP 132
Query: 162 AI----------------AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
AI ++Q+A+ + +L + + +H D+ A NILL K+CDF
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDF 189
Query: 206 GSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
G A+ S+ V+ + P + + + ++DV+S+G
Sbjct: 190 GLARDIKNDSNYVVKGNARLPVK---------------WMAPESIFNCVYTFESDVWSYG 234
Query: 264 VILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+ L EL + + P G + S M+ + ++ P A M
Sbjct: 235 IFLWELFSLGSS--PYPGMPVDSKFYKMIKEGF--------RMLSPEHA-------PAEM 277
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQIS 353
I C P+ RP+ QI+ I+ QIS
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V LA I D N K+ V + K D++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG----------TPR---SSKLPWRN 159
H NI+ L+G C ++ EY G L+E L P +L ++
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ A+Q+A+ +EYL ++C +H D+ A N+L+ E K+ DFG A+
Sbjct: 193 LVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR--------- 239
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV+L E+ T
Sbjct: 240 -DIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 25/215 (11%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLH--LSHDNIVKLIG 122
+G GGF+ + + G I + Q K ++I +H L+H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ +D D ++ E +L E LH R L Q+ +YLH +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
+H D+K N+ L E L K+ DFG A K+ + ++ ++ G+P
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKVLCGTPN 204
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
Y P L S + DV+S G I+ L+ G F
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 63/330 (19%)
Query: 51 WDDVERFTQN---FSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VF 102
+D F +N F + +G+G F V A LI + A+K+ S L++
Sbjct: 30 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL 89
Query: 103 KQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
EL +L +L +H NIV L+G C +++ EY G L L R S + +
Sbjct: 90 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSP 148
Query: 162 AI----------------AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
AI ++Q+A+ + +L + + +H D+ A NILL K+CDF
Sbjct: 149 AIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDF 205
Query: 206 GSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
G A+ S+ V+ + P + + + ++DV+S+G
Sbjct: 206 GLARDIKNDSNYVVKGNARLPVK---------------WMAPESIFNCVYTFESDVWSYG 250
Query: 264 VILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+ L EL + + P G + S M+ + ++ P A M
Sbjct: 251 IFLWELFSLGSS--PYPGMPVDSKFYKMIKEGF--------RMLSPEHA-------PAEM 293
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQIS 353
I C P+ RP+ QI+ I+ QIS
Sbjct: 294 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 323
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L + ++P +
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---EAKRIPEEILGKV 119
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 120 SIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 172
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+EL G P + +
Sbjct: 173 ------------FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
Query: 284 LTSLAGSMLNDIADCEATKVN 304
L ++ G + D + E ++
Sbjct: 221 LEAIFGRPVVDGEEGEPHSIS 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 37/227 (16%)
Query: 52 DDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELD 107
DD E+ + + IG G F VY AR + +S AIK S + S Q +E+
Sbjct: 50 DDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVV--AIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEY-VPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
L L H N ++ G L+ EY + + + ++H P L A+
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHG 162
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
Q + YLH +++H D+KA NILL E KL DFGSA +
Sbjct: 163 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI---------------- 203
Query: 227 XXXITKQVMMIGSPGYTDPHY---LRTGMASTKTDVYSFGVILLELV 270
+ +G+P + P + G K DV+S G+ +EL
Sbjct: 204 ---MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNG-AIKIHVG--SDRLSQVFKQELDILLHLSHDNIVK 119
+VIG+G F V RL + AIK G ++R + F E I+ H NI++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G + ++L E++ NG L L + + + +A + YL E
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGMLRGIASGMRYLAE--- 134
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+ VH D+ A NIL+ +L CK+ DFG ++ L + ++ +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRF------LEENSSDPTYTSSLGGKIPI--- 185
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +D +S+G+++ E+++
Sbjct: 186 -RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 50/311 (16%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 270
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 271 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 329
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H ++ A N L+ E+ K+ DFG +++ T
Sbjct: 330 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 372
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSLAGSM 291
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 373 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 417
Query: 292 LNDIADCEATKVNELVDPRLAGDFDLDEARA----MLSIAALCLRQSPILRPSATQILHT 347
+ ++V EL L D+ ++ + + C + +P RPS +I
Sbjct: 418 ----PGIDLSQVYEL----LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 469
Query: 348 IK--HQISSIS 356
+ Q SSIS
Sbjct: 470 FETMFQESSIS 480
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 25/215 (11%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLH--LSHDNIVKLIG 122
+G GGF+ + + G I + Q K ++I +H L+H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ +D D ++ E +L E LH R L Q+ +YLH +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
+H D+K N+ L E L K+ DFG A K+ + ++ ++ G+P
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKVLCGTPN 206
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
Y P L S + DV+S G I+ L+ G F
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--QVFKQELDILLH--LSHDNIVKL 120
+G GGF+ + + + T A KI S L Q K ++I +H L+H ++V
Sbjct: 23 LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
G+ +D D ++ E +L E LH R L Q+ +YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+K N+ L E L K+ DFG A K+ + ++ ++ G+
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKVLCGT 178
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P Y P L S + DV+S G I+ L+ G F
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 63/330 (19%)
Query: 51 WDDVERFTQN---FSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VF 102
+D F +N F + +G+G F V A LI + A+K+ S L++
Sbjct: 37 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL 96
Query: 103 KQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
EL +L +L +H NIV L+G C +++ EY G L L R S + +
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSP 155
Query: 162 AI----------------AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
AI ++Q+A+ + +L + + +H D+ A NILL K+CDF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDF 212
Query: 206 GSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
G A+ S+ V+ + P + + + ++DV+S+G
Sbjct: 213 GLARDIKNDSNYVVKGNARLPVK---------------WMAPESIFNCVYTFESDVWSYG 257
Query: 264 VILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+ L EL + + P G + S M+ + ++ P A M
Sbjct: 258 IFLWELFSLGSS--PYPGMPVDSKFYKMIKEGF--------RMLSPEHA-------PAEM 300
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQIS 353
I C P+ RP+ QI+ I+ QIS
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 63/330 (19%)
Query: 51 WDDVERFTQN---FSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VF 102
+D F +N F + +G+G F V A LI + A+K+ S L++
Sbjct: 37 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL 96
Query: 103 KQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
EL +L +L +H NIV L+G C +++ EY G L L R S + +
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSP 155
Query: 162 AI----------------AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
AI ++Q+A+ + +L + + +H D+ A NILL K+CDF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDF 212
Query: 206 GSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
G A+ S+ V+ + P + + + ++DV+S+G
Sbjct: 213 GLARHIKNDSNYVVKGNARLPVK---------------WMAPESIFNCVYTFESDVWSYG 257
Query: 264 VILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+ L EL + + P G + S M+ + ++ P A M
Sbjct: 258 IFLWELFSLGSS--PYPGMPVDSKFYKMIKEGF--------RMLSPEHA-------PAEM 300
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQIS 353
I C P+ RP+ QI+ I+ QIS
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 174
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 175 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 173
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 174 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 63/330 (19%)
Query: 51 WDDVERFTQN---FSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VF 102
+D F +N F + +G+G F V A LI + A+K+ S L++
Sbjct: 32 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL 91
Query: 103 KQELDILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
EL +L +L +H NIV L+G C +++ EY G L L R S + +
Sbjct: 92 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSP 150
Query: 162 AI----------------AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
AI ++Q+A+ + +L + + +H D+ A NILL K+CDF
Sbjct: 151 AIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDF 207
Query: 206 GSAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
G A+ S+ V+ + P + + + ++DV+S+G
Sbjct: 208 GLARDIKNDSNYVVKGNARLPVK---------------WMAPESIFNCVYTFESDVWSYG 252
Query: 264 VILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+ L EL + + P G + S M+ + ++ P A M
Sbjct: 253 IFLWELFSLGSS--PYPGMPVDSKFYKMIKEGF--------RMLSPEHA-------PAEM 295
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQIS 353
I C P+ RP+ QI+ I+ QIS
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 325
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
++ER +G G + VY + S A+K + F +E ++ +
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 312
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H N+V+L+G C ++ E++ G L + L R ++ + +A Q++ A+E
Sbjct: 313 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 371
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL ++ + +H ++ A N L+ E+ K+ DFG +++ T
Sbjct: 372 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL--------------MTGDTYTA 414
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+T P L S K+DV++FGV+L E+ T GM +
Sbjct: 415 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 174
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 175 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 174
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 175 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 173
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 174 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 203
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 154 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 203
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 204 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGFVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 18 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 67
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 181 --------------HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 273 MEAF 276
F
Sbjct: 227 RTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 18 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 67
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 181 --------------HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 273 MEAF 276
F
Sbjct: 227 RTLF 230
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 177
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 178 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 176
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 177 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ + V +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEI 177
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 178 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 175
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 176 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 18 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 67
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 181 --------------HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 273 MEAF 276
F
Sbjct: 227 RTLF 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ + V +
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEI 178
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 179 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 176
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 177 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 52 DDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELD 107
DD E+ + + IG G F VY AR + +S AIK S + S Q +E+
Sbjct: 11 DDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVV--AIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEY-VPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
L L H N ++ G L+ EY + + + ++H P L A+
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHG 123
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
Q + YLH +++H D+KA NILL E KL DFGSA +
Sbjct: 124 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI---------------- 164
Query: 227 XXXITKQVMMIGSPGYTDPHY---LRTGMASTKTDVYSFGVILLEL 269
+ +G+P + P + G K DV+S G+ +EL
Sbjct: 165 ---MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 174
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 175 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 175
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 176 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 27 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DF G S VL ++ +GS
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVLD------------DEETSSVGS 181
Query: 240 P---GYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 176
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 177 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--QVFKQELDILLH--LSHDNIVKL 120
+G GGF+ + + + T A KI S L Q K ++I +H L+H ++V
Sbjct: 25 LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
G+ +D D ++ E +L E LH R L Q+ +YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+K N+ L E L K+ DFG A K+ + ++ + G+
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKTLCGT 180
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P Y P L S + DV+S G I+ L+ G F
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ + V +
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEI 175
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 176 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--QVFKQELDILLH--LSHDNIVKL 120
+G GGF+ + + + T A KI S L Q K ++I +H L+H ++V
Sbjct: 25 LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
G+ +D D ++ E +L E LH R L Q+ +YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+K N+ L E L K+ DFG A K+ + ++ + G+
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKTLCGT 180
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P Y P L S + DV+S G I+ L+ G F
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ + V +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEI 175
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 176 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ +K + +P + FQL Q + + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 177
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 178 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--QVFKQELDILLH--LSHDNIVKL 120
+G GGF+ + + + T A KI S L Q K ++I +H L+H ++V
Sbjct: 29 LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
G+ +D D ++ E +L E LH R L Q+ +YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHK--RRKALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
++H D+K N+ L E L K+ DFG A K+ + ++ + G+
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------RKKTLCGT 184
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
P Y P L S + DV+S G I+ L+ G F
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 186
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 187 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ + L++ + + + +P + FQL Q + + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCH 120
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ + V +
Sbjct: 121 SH---RVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEI 174
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 175 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 26 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 83
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 139
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 181
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ ++G+P + P + + D++S G++++E+V G +
Sbjct: 182 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 7 QELAKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 56
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ + +
Sbjct: 57 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCA 116
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 170 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 273 MEAF 276
F
Sbjct: 216 RTLF 219
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ + L++ + + + +P + FQL Q + + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCH 123
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 177
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 178 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 7 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 56
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 57 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 170 --------------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 273 MEAF 276
F
Sbjct: 216 RTLF 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 7 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DFG ++ T V
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--------------TSSVGSKFP 164
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 86/334 (25%)
Query: 48 KYSWDDVERFTQNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQ 104
KY+ D +RF +F ++ IGSGGF V+ A+ I+ T +K + ++ ++
Sbjct: 3 KYTVD--KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN------NEKAER 54
Query: 105 ELDILLHLSHDNIVKLIGYCD--------------------------DRDEGVLLF---E 135
E+ L L H NIV G D R + LF E
Sbjct: 55 EVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQME 114
Query: 136 YVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLE 195
+ GTL++ + R KL + + Q+ + ++Y+H + ++H D+K SNI L
Sbjct: 115 FCDKGTLEQWIE-KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLV 170
Query: 196 EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAST 255
+ K+ DFG K+ G+ Y P + +
Sbjct: 171 DTKQVKIGDFG----------------LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGK 214
Query: 256 KTDVYSFGVILLELVTGME-AFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGD 314
+ D+Y+ G+IL EL+ + AF E + T L +++DI
Sbjct: 215 EVDLYALGLILAELLHVCDTAF--ETSKFFTDLRDGIISDI------------------- 253
Query: 315 FDLDEARAMLSIAALCLRQSPILRPSATQILHTI 348
FD E + + L + P RP+ ++IL T+
Sbjct: 254 FDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 283
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 11 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DFG ++ T V
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--------------TSSVGSKFP 168
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+ +G G F V LA + T A+K + + ++E+ L L H +I+
Sbjct: 15 ETLGEGSFGKVKLA--THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL + V++ EY G L + + R ++ R Q+ AIEY H
Sbjct: 73 KLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQ---QIICAIEYCHRH- 127
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
IVH D+K N+LL+++LN K+ DFG + + L G
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS----------------CG 169
Query: 239 SPGYTDPHYLRTGM-ASTKTDVYSFGVILLELVTGMEAFCPE 279
SP Y P + + A + DV+S G++L ++ G F E
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 12 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DFG S VL +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFG-----LSRYVLDDEYTSSRGSKFPVR------- 171
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 172 --WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 27 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DF G S VL +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVLDDEYTSSVGSKFPVR------- 186
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 187 --WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 24/227 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 28 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 85
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 141
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 183
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPE 279
+ ++G+P + P + + D++S G++++E+V G + E
Sbjct: 184 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
NIVKL+ ++ L+FE++ + L++ + + + +P + FQL Q + + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCH 122
Query: 176 ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
++H D+K N+L+ KL DFG A+ F V + +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE--I 176
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++G Y ST D++S G I E+VT F
Sbjct: 177 LLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 7 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 56
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 57 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 170 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 273 MEAF 276
F
Sbjct: 216 RTLF 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 22 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 71
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 184
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 185 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 273 MEAF 276
F
Sbjct: 231 RTLF 234
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 24/227 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 21 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 78
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 134
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 135 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 176
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPE 279
+ ++G+P + P + + D++S G++++E+V G + E
Sbjct: 177 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 8 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 57
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 58 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 170
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 171 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
Query: 273 MEAF 276
F
Sbjct: 217 RTLF 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG + VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLGR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 148 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 205
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 261
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 262 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 303
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ ++G+P + P + + D++S G++++E+V G +
Sbjct: 304 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 30 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 79
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 193 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 273 MEAF 276
F
Sbjct: 239 RTLF 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 23 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 72
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 186 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 273 MEAF 276
F
Sbjct: 232 RTLF 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 8 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 57
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 58 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 170
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 171 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
Query: 273 MEAF 276
F
Sbjct: 217 RTLF 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 31 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 80
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 194 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 273 MEAF 276
F
Sbjct: 240 RTLF 243
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ EY+ NG+L L ++ + + +A ++YL +
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 164 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 213
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 214 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 23 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 72
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 186 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 273 MEAF 276
F
Sbjct: 232 RTLF 235
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 24/227 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 17 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 74
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 130
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 172
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPE 279
+ ++G+P + P + + D++S G++++E+V G + E
Sbjct: 173 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 9 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 58
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 59 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 118
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 171
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 172 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
Query: 273 MEAF 276
F
Sbjct: 218 RTLF 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDILLHLSHDNIVKL 120
IG G FS V R + T A KI + + +LS Q ++E I L H NIV+L
Sbjct: 12 IGKGAFSVV--RRCVKLCTGHEYAAKI-INTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+F+ V G L E + S+ + + Q+ +A+ + H+ +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QILEAVLHCHQ---M 122
Query: 181 HIVHGDIKASNILLEEHLN---CKLCDFG---------SAKMGFSSAVLXXXXXXXXXXX 228
+VH D+K N+LL KL DFG A GF+
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--------------- 167
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P LR D+++ GVIL L+ G F E+ L
Sbjct: 168 ---------GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKL 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 124/265 (46%), Gaps = 34/265 (12%)
Query: 94 GSDRLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
G+D++ + K+E+ IL H NI+ L + +E V++FE++ + E+++ + +
Sbjct: 42 GTDQV--LVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS--AF 97
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC--KLCDFGSAKMG 211
+L R ++ Q+ +A+++LH +I H DI+ NI+ + + K+ +FG A+
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Query: 212 FSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ +P Y P + + ST TD++S G ++ L++
Sbjct: 155 KPGDNFR----------------LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198
Query: 272 GMEAFCPE-NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
G+ F E N Q++ ++ + D EA K + + E ++ ++ +
Sbjct: 199 GINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256
Query: 331 LRQSPILRPS----ATQILHTIKHQ 351
Q P L+ +T+++ T+KH+
Sbjct: 257 --QHPWLKQKIERVSTKVIRTLKHR 279
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 23 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSKPFQ 72
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 186 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 273 MEAF 276
F
Sbjct: 232 RTLF 235
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 13 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 62
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 176 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 273 MEAF 276
F
Sbjct: 222 RTLF 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 16 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 65
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 178
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 179 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 273 MEAF 276
F
Sbjct: 225 RTLF 228
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
VK +D R+TQ Q IG G + V S++ + K V ++S Q
Sbjct: 34 VKGQPFDVGPRYTQ--LQYIGEGAYGMV--------SSAYDHVRKTRVAIKKISPFEHQT 83
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+N++ + + Y+ ++ L+ +S +L
Sbjct: 84 YCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN 143
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+L+ + K+CDFG A++
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 248
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
D + NF + IG G V +A + S K+ + + ++ E+ I+
Sbjct: 71 DPRSYLDNFIK-IGEGSTGIVCIA-TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 128
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H+N+V++ DE ++ E++ G L + + T ++ A+ + QA+
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALS 184
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
LH + ++H DIK+ +ILL KL DF GF + V + +
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDF-----GFCAQV----------SKEVPR 226
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ ++G+P + P + + D++S G++++E+V G +
Sbjct: 227 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 36/231 (15%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 32 KLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWRNR------------ 160
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 151 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLAR-----DIXKDP 202
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M P + + + ++DV+SFGV+L E+ +
Sbjct: 203 DXVRKGDARLPLKWMA--------PETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 16 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 65
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 178
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 179 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 273 MEAF 276
F
Sbjct: 225 RTLF 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S IGSG + +V A + T A+K +LS+ F+
Sbjct: 16 QELNKTIWEVPERY-QNLSP-IGSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 65
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 178
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 179 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 273 MEAF 276
F
Sbjct: 225 RTLF 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 13 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 62
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 176 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 273 MEAF 276
F
Sbjct: 222 RTLF 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 7 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 56
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 57 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 170 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 273 MEAF 276
F
Sbjct: 216 RTLF 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 12 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DFG ++ T V
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--------------TSSVGSKFP 169
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 13 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 62
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 176 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 273 MEAF 276
F
Sbjct: 222 RTLF 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 16 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 65
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 178
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 179 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 273 MEAF 276
F
Sbjct: 225 RTLF 228
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F + +G+G F V + + AIK+ F +E ++++LSH+ +V+
Sbjct: 18 TFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G C + ++ EY+ NG L L + + + + + +A+EYL +
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N L+ + K+ DF G S VL T V
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVL---------DDEYTSSVGSKFP 175
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ P L S+K+D+++FGV++ E+ +
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 10 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 59
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 60 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 119
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 172
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 173 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
Query: 273 MEAF 276
F
Sbjct: 219 RTLF 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 18 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 67
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 181 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 273 MEAF 276
F
Sbjct: 227 RTLF 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 56/319 (17%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELD 107
+ R F + +G+G F V A L + A+K+ + + EL
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 108 ILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPR-----------SSKL 155
I+ HL H+NIV L+G C +++ EY G L L R +S L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK--MGFS 213
R+ + + Q+AQ + +L + + +H D+ A N+LL K+ DFG A+ M S
Sbjct: 162 STRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-G 272
+ ++ + P + + + ++DV+S+G++L E+ + G
Sbjct: 219 NYIVKGNARLPVK---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 273 MEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLR 332
+ P G L+ S ++ D ++ P A + + SI C
Sbjct: 264 LN---PYPGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNIYSIMQACWA 305
Query: 333 QSPILRPSATQILHTIKHQ 351
P RP+ QI ++ Q
Sbjct: 306 LEPTHRPTFQQICSFLQEQ 324
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 34 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 83
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 196
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 197 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 273 MEAF 276
F
Sbjct: 243 RTLF 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 17 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 66
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 179
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 180 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 273 MEAF 276
F
Sbjct: 226 RTLF 229
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 22 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 71
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 184
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 185 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 273 MEAF 276
F
Sbjct: 231 RTLF 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI-HVGSDRLSQVFKQELDILLHLSHDNIVKLIGY 123
IG G V LAR + A+K+ + + ++ E+ I+ H N+V++
Sbjct: 53 IGEGSTGIVCLAR--EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 124 CDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIV 183
+E +L E++ G L + + +L + + QA+ YLH + ++
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 184 HGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYT 243
H DIK+ +ILL KL DFG F + + + K+ ++G+P +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFG-----FCAQI----------SKDVPKRKXLVGTPYWM 208
Query: 244 DPHYLRTGMASTKTDVYSFGVILLELVTG 272
P + + +T+ D++S G++++E+V G
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P + + + ++DV+SFGV+L E+ +
Sbjct: 206 RKGDARLPLK-------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 28/224 (12%)
Query: 59 QNFSQV--IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHD 115
+NF +V IG G + VY AR + I++ ++ + +E+ +L L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 116 NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKL---PWRNRMAIAFQLAQAIE 172
NIVKL+ ++ L+FE+ L + L +S L P + FQL Q +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
+ H ++H D+K N+L+ KL DFG A+ + V
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRA 174
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+++G Y ST D++S G I E+VT F
Sbjct: 175 PEILLGCKYY-----------STAVDIWSLGCIFAEMVTRRALF 207
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 30 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 79
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 193 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 273 MEAF 276
F
Sbjct: 239 RTLF 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 31 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 80
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 194 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 273 MEAF 276
F
Sbjct: 240 RTLF 243
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+GSG + V L + + T AIKI V + S E+ +L L H NI+KL
Sbjct: 29 LGSGAYGEVLLCK--DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ +D+ L+ E G L +++ + S++ + I Q+ YLH+
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAVIMKQVLSGTTYLHKH--- 140
Query: 181 HIVHGDIKASNILLEEHLN---CKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+IVH D+K N+LLE K+ DFG SA K
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-----------------KMKER 183
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+G+ Y P LR K DV+S GVIL L+ G F + Q
Sbjct: 184 LGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQ 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 171
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 172 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 224
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 225 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
Query: 284 LTSLAG 289
L + G
Sbjct: 273 LELMFG 278
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 136
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 137 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 189
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 190 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
Query: 284 LTSLAG 289
L + G
Sbjct: 238 LELMFG 243
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 39/233 (16%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLH-----GTPRS--------SKLPWRN 159
H NI+ L+G C ++ EY G L+E L G S ++ +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 160 RMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR--------- 205
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 -DINNIDXXKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 31 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 80
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 194 --------------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 273 MEAF 276
F
Sbjct: 240 RTLF 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 17 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 66
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 179
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 180 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 273 MEAF 276
F
Sbjct: 226 RTLF 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 34 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 83
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH--- 197
Query: 214 SAVLXXXXXXXXXXXXITKQVMM--IGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELV 270
T M + + Y P + M +T D++S G I+ EL+
Sbjct: 198 -----------------TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 271 TGMEAF 276
TG F
Sbjct: 241 TGRTLF 246
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 163 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Query: 284 LTSLAG 289
L + G
Sbjct: 211 LELMFG 216
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 163 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Query: 284 LTSLAG 289
L + G
Sbjct: 211 LELMFG 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 17 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 66
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 179
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 180 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 273 MEAF 276
F
Sbjct: 226 RTLF 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 163 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Query: 284 LTSLAG 289
L + G
Sbjct: 211 LELMFG 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q IG+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ K+ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDXXKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 56 RFTQNFS--QVIGSGGFSNVY-LARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL 112
RFT+ + + +G G FS V +++ I S R Q ++E I L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIE 172
H NIV+L + L+F+ V G L E + S+ + Q+ +A+
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA---DASHCIQQILEAVL 124
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLN---CKLCDFG---------SAKMGFSSAVLXXX 220
+ H+ + +VH ++K N+LL L KL DFG A GF+
Sbjct: 125 HCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA------- 174
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+PGY P LR D+++ GVIL L+ G F E+
Sbjct: 175 -----------------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217
Query: 281 GQLL 284
L
Sbjct: 218 QHRL 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQL 283
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 163 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Query: 284 LTSLAG 289
L + G
Sbjct: 211 LELMFG 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SD 96
G GRS + ++E + ++IGSG V RL + AIK + G ++
Sbjct: 36 GRAGRSFTR----EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE 91
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
R + F E I+ H NI++L G +++ EY+ NG+L L +
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFT 149
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAV 216
+ + + + YL + L VH D+ A N+L++ +L CK+ DFG ++ V
Sbjct: 150 IMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR------V 200
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
L + +T P + S+ +DV+SFGV++ E++
Sbjct: 201 LEDDPDAAXTTTGGKIPIR------WTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +S
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 13 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 62
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR---- 175
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 176 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 273 MEAF 276
F
Sbjct: 222 RTLF 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SD 96
G GRS + ++E + ++IGSG V RL + AIK + G ++
Sbjct: 36 GRAGRSFTR----EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE 91
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
R + F E I+ H NI++L G +++ EY+ NG+L L +
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFT 149
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAV 216
+ + + + YL + L VH D+ A N+L++ +L CK+ DFG ++ V
Sbjct: 150 IMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR------V 200
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
L + +T P + S+ +DV+SFGV++ E++
Sbjct: 201 LEDDPDAAYTTTGGKIPIR------WTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G + VY A+ T I++ + + +E+ IL L H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 125 DDRDEGVLLFEYVPN--GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ VL+FE++ L + G S + QL I Y H+R +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR---RV 121
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H D+K N+L+ K+ DFG A+ F V T +V+ + Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR-AFGIPV-----------RKYTHEVVTL---WY 166
Query: 243 TDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
P L + ST D++S G I E+V G F
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 17 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 66
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR---- 179
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 180 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 273 MEAF 276
F
Sbjct: 226 RTLF 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G + VY A+ T I++ + + +E+ IL L H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 125 DDRDEGVLLFEYVPN--GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ VL+FE++ L + G S + QL I Y H+R +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR---RV 121
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H D+K N+L+ K+ DFG A+ F V T +V+ + Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR-AFGIPV-----------RKYTHEVVTL---WY 166
Query: 243 TDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
P L + ST D++S G I E+V G F
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G + VY A+ T I++ + + +E+ IL L H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 125 DDRDEGVLLFEYVPNG--TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
+ VL+FE++ L + G S + QL I Y H+R +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR---RV 121
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGY 242
+H D+K N+L+ K+ DFG A+ F V K I + Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR-AFGIPV--------------RKYTHEIVTLWY 166
Query: 243 TDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
P L + ST D++S G I E+V G F
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 20/167 (11%)
Query: 53 DVERFTQNFSQV--IGSGGFSNVYLARLINDSTSTNGAIK-IHVG-----SDRLSQVFKQ 104
DV+ + + ++ +G G F+ VY AR + +T+ AIK I +G D +++ +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E+ +L LSH NI+ L+ + L+F++ ++ L + + L A
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKA 116
Query: 165 FQLA--QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+ L Q +EYLH+ I+H D+K +N+LL+E+ KL DFG AK
Sbjct: 117 YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 103 KQELDILLHLSHDNIVKLIG--YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
K+E+ +L L H N+++L+ Y +++ + ++ EY G +QE L P + P
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEK-RFPVCQA 111
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
QL +EYLH + IVH DIK N+LL K+ G A+ A
Sbjct: 112 HGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA---- 164
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGM---ASTKTDVYSFGVILLELVTGMEAFC 277
T Q GSP + P + G+ + K D++S GV L + TG+ F
Sbjct: 165 -----DDTCRTSQ----GSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Query: 278 PEN 280
+N
Sbjct: 215 GDN 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR-----DIXK 200
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M P + + + ++DV+SFGV+L E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMA--------PETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKNTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDILLHLSHDNIVKL 120
+G G FS V R + A KI + + +LS Q ++E I L H NIV+L
Sbjct: 30 LGKGAFSVV--RRCVKVLAGQEYAAKI-INTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+F+ V G L E + S+ + + Q+ +A+ + H+ +
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QILEAVLHCHQ---M 140
Query: 181 HIVHGDIKASNILLEEHLN---CKLCDFG---------SAKMGFSSAVLXXXXXXXXXXX 228
+VH D+K N+LL L KL DFG A GF+
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--------------- 185
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P LR D+++ GVIL L+ G F E+ L
Sbjct: 186 ---------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 115 D-NIVKLIGYCDDRDEGVLLF-EYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C +++ E+ G L L + R+ +P++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR-----DIXK 191
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M P + + + ++DV+SFGV+L E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMA--------PETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 61 FSQVIGSGGFSNVY--LARLINDST---STNGAIKIHVGSDR-LSQVFKQELDILLHLSH 114
F++ +G G F+ ++ + R + D T +K+ + R S+ F + ++ LSH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
++V G C DE +L+ E+V G+L L + W ++ +A QLA A+ +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM---GFSSAVLXXXXXXXXXXXXIT 231
E ++HG++ A NILL + K + K+ G S VL +
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL--------PKDILQ 178
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA------------FCPE 279
+++ + +P L TD +SFG L E+ +G + F +
Sbjct: 179 ERIPWVPPECIENPKNLNLA-----TDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
Query: 280 NGQLLTSLAGSMLNDIADC 298
QL A + N I +C
Sbjct: 234 RHQLPAPKAAELANLINNC 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 61 FSQVIGSGGFSNVY--LARLINDST---STNGAIKIHVGSDR-LSQVFKQELDILLHLSH 114
F++ +G G F+ ++ + R + D T +K+ + R S+ F + ++ LSH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
++V G C DE +L+ E+V G+L L + W ++ +A QLA A+ +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM---GFSSAVLXXXXXXXXXXXXIT 231
E ++HG++ A NILL + K + K+ G S VL +
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL--------PKDILQ 178
Query: 232 KQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA------------FCPE 279
+++ + +P L TD +SFG L E+ +G + F +
Sbjct: 179 ERIPWVPPECIENPKNLNLA-----TDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
Query: 280 NGQLLTSLAGSMLNDIADC 298
QL A + N I +C
Sbjct: 234 RHQLPAPKAAELANLINNC 252
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHV----GSDRLSQVFKQELDILLHLSH 114
+ +G G F V A D T+T + + + + + EL IL+H+ H
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 115 D-NIVKLIGYCDDRDEGVL-LFEYVPNGTLQEKLHGTPRSSKLPWR-------------- 158
N+V L+G C ++ + E+ G L L + R+ +P++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
+ + +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+ +
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR-----DIXK 191
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ + M P + + + ++DV+SFGV+L E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMA--------PETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVG-------SDRLSQVFKQELDILLHL 112
+ +G G F V +A + D A+ + V + LS + + + +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG 98
Query: 113 SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+GSG + V L + + T AIKI V + S E+ +L L H NI+KL
Sbjct: 12 LGSGAYGEVLLCK--DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ +D+ L+ E G L +++ + S++ + I Q+ YLH+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAVIMKQVLSGTTYLHKH--- 123
Query: 181 HIVHGDIKASNILLEEHLN---CKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+IVH D+K N+LLE K+ DFG SA K
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-----------------KMKER 166
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+G+ Y P LR K DV+S GVIL L+ G F + Q
Sbjct: 167 LGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQ 211
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 39/226 (17%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+V G F V+ A+L+N+ A+KI D+ S + E+ L + H+NI++ IG
Sbjct: 30 EVKARGRFGCVWKAQLLNEYV----AVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 123 YCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ R V L+ + G+L + L +++ + W IA +A+ + YLHE
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHED 140
Query: 178 C-------TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXI 230
I H DIK+ N+LL+ +L + DFG A + F +
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTHG------- 192
Query: 231 TKQVMMIGSPGYTDPHYLRTGM-----ASTKTDVYSFGVILLELVT 271
+G+ Y P L + A + D+Y+ G++L EL +
Sbjct: 193 -----QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN + V GSG + +V A + T A+K +LS+ F+
Sbjct: 21 QELNKTIWEVPERY-QNLAPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 70
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 71 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 130
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 183
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 184 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
Query: 273 MEAF 276
F
Sbjct: 230 RTLF 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 132/319 (41%), Gaps = 60/319 (18%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG + + +A K
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG----------GK 191
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QLLT-SL 287
++ + + P L+ G+ +T +D++SFGV+L E+ + E P G Q+L +
Sbjct: 192 GLLPVR---WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQVLKFVM 246
Query: 288 AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHT 347
G L+ +C +V +L+ +C + +P +RP+ +I++
Sbjct: 247 DGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPKMRPTFLEIVNL 285
Query: 348 IKHQI----SSISFLFSPQ 362
+K + +SF S +
Sbjct: 286 LKDDLHPSFPEVSFFHSEE 304
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ D+G A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 105 ELDILLHLSHD--NIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
+LD++L SHD IV+ G + + E + GT EKL + +P R
Sbjct: 73 DLDVVLK-SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGP-IPERILGK 128
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
+ + +A+ YL E+ ++H D+K SNILL+E KLCDF G S ++
Sbjct: 129 MTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDF-----GISGRLVDDKAK 181
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF--CPEN 280
I P T P Y + DV+S G+ L+EL TG + C +
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDY------DIRADVWSLGISLVELATGQFPYKNCKTD 235
Query: 281 GQLLTSL 287
++LT +
Sbjct: 236 FEVLTKV 242
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+G+ Y P L+ S ++D++S G+ L+E+ G P + +
Sbjct: 163 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 45/256 (17%)
Query: 40 GIDGRSVKKY----------SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTS 84
G + SVK++ W++ + T + Q IG+G F V L + + T
Sbjct: 9 GXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM--ETG 66
Query: 85 TNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG 140
+ A+KI +L Q+ E IL ++ +VKL D ++ EY+P G
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG 126
Query: 141 TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC 200
+ L R S+ R A Q+ EYLH +L +++ D+K N+L+++
Sbjct: 127 DMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 201 KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVY 260
K+ DFG AK + + G+P Y P + + + D +
Sbjct: 181 KVADFGFAK------------------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 261 SFGVILLELVTGMEAF 276
+ GV++ E+ G F
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 125/315 (39%), Gaps = 52/315 (16%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELD 107
+ R F + +G+G F V A L + A+K+ + + EL
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 108 ILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS-------KLPWRN 159
I+ HL H+NIV L+G C +++ EY G L L + L R+
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK--MGFSSAVL 217
+ + Q+AQ + +L + + +H D+ A N+LL K+ DFG A+ M S+ ++
Sbjct: 154 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAF 276
+ P + + + ++DV+S+G++L E+ + G+
Sbjct: 211 KGNARLPVK---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-- 253
Query: 277 CPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPI 336
P G L+ S ++ D ++ P A + + SI C P
Sbjct: 254 -PYPGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNIYSIMQACWALEPT 297
Query: 337 LRPSATQILHTIKHQ 351
RP+ QI ++ Q
Sbjct: 298 HRPTFQQICSFLQEQ 312
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 27/241 (11%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSD 96
G G S + Y +++R + IG G F +V+ ++ ++ + AIK + SD
Sbjct: 24 GAMGSSTRDY---EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 80
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ + F QE + H +IVKLIG + +++ E G L+ L R L
Sbjct: 81 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLD 137
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAV 216
+ + A+QL+ A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 138 LASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEA 275
+K + I + P + ++ +DV+ FGV + E L+ G++
Sbjct: 195 YKA-----------SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
Query: 276 F 276
F
Sbjct: 241 F 241
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 27/241 (11%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSD 96
G G S + Y +++R + IG G F +V+ ++ ++ + AIK + SD
Sbjct: 1 GAMGSSTRDY---EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 57
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLP 156
+ + F QE + H +IVKLIG + +++ E G L+ L R L
Sbjct: 58 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ--VRKYSLD 114
Query: 157 WRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAV 216
+ + A+QL+ A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 115 LASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEA 275
+K + I + P + ++ +DV+ FGV + E L+ G++
Sbjct: 172 YKA-----------SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
Query: 276 F 276
F
Sbjct: 218 F 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
I +A+ +L E L I+H DIK SNILL+ N KLCDFG + S
Sbjct: 130 ITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+P DP R G ++DV+S G+ L EL TG +
Sbjct: 188 CRPYM-----------APERIDPSASRQGY-DVRSDVWSLGITLYELATGRFPY------ 229
Query: 283 LLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
N + D + T+V + P+L+ + + + + ++ LCL + RP
Sbjct: 230 -------PKWNSVFD-QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK 281
Query: 343 QIL 345
++L
Sbjct: 282 ELL 284
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 58/305 (19%)
Query: 54 VERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIK---IHVGSDRLSQVFKQELDIL 109
++R +++G G F +V L D TS A+K + S R + F E +
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 110 LHLSHDNIVKLIGYC-DDRDEGV----LLFEYVPNGTLQ-----EKLHGTPRSSKLPWRN 159
SH N+++L+G C + +G+ ++ ++ G L +L P+ +P +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK--HIPLQT 148
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ +A +EYL R + +H D+ A N +L + + + DFG +K +S
Sbjct: 149 LLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG----- 200
Query: 220 XXXXXXXXXXITKQ-VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFC 277
I K V I D Y ++K+DV++FGV + E+ T GM +
Sbjct: 201 ---DYYRQGRIAKMPVKWIAIESLADRVY------TSKSDVWAFGVTMWEIATRGMTPYP 251
Query: 278 P-ENGQLLTSLA-GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSP 335
+N ++ L G L DC LDE + I C R P
Sbjct: 252 GVQNHEMYDYLLHGHRLKQPEDC------------------LDE---LYEIMYSCWRTDP 290
Query: 336 ILRPS 340
+ RP+
Sbjct: 291 LDRPT 295
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 125/324 (38%), Gaps = 40/324 (12%)
Query: 40 GIDGRSVKKYSWDDVE--RFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDR 97
G GR + VE +V+ GGF+ VY A+ + S ++ +
Sbjct: 9 GASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVG-SGREYALKRLLSNEEE 67
Query: 98 LSQVFKQELDILLHLS-HDNIVKLIGYC----DDRDEG---VLLFEYVPNGTLQEKLHGT 149
++ QE+ + LS H NIV+ ++ D G LL + G L E L
Sbjct: 68 KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM 127
Query: 150 PRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
L + I +Q +A++++H R I+H D+K N+LL KLCDFGSA
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186
Query: 210 MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYL---RTGMASTKTDVYSFGVIL 266
+ + + +++ +P Y P + K D+++ G IL
Sbjct: 187 ---TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
Query: 267 LELVTGMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSI 326
L F E+G L + G D + T + L+ RAML +
Sbjct: 244 YLLCFRQHPF--EDGAKLRIVNGKYSIPPHDTQYTVFHSLI-------------RAMLQV 288
Query: 327 AALCLRQSPILRPSATQILHTIKH 350
+P R S +++H ++
Sbjct: 289 -------NPEERLSIAEVVHQLQE 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 203
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 204 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 251
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 252 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ ++ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD----RLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY + + + + I + ++ + + F E I+ + H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L+G C L+ + +P+G L E +H + + + Q+A+ + YL ER
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+VH D+ A N+L++ + K+ DFG A++ + + +
Sbjct: 160 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--- 214
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
HY + + ++DV+S+GV + EL+T
Sbjct: 215 -------HYRK---FTHQSDVWSYGVTIWELMT 237
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 149
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 150 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 197
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 198 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q IG+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EY+P G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ K+ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 104 QELDILLHLSHDNIVKLIGY--------------CDD------RDEGV------------ 131
+ELDI+ L H NI+KL+ Y DD ++ GV
Sbjct: 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPS 108
Query: 132 ------LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI-AFQLAQAIEYLHERCTLHIVH 184
++ EYVP+ TL + L RS + N ++I +QL +A+ ++H +L I H
Sbjct: 109 QNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICH 164
Query: 185 GDIKASNILLEEHLNC-KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYT 243
DIK N+L+ N KLCDFGSAK S V I S Y
Sbjct: 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------------PSVAXICSRFYR 208
Query: 244 DPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFCPE 279
P + T + D++S G + EL+ G F E
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 56/319 (17%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELD 107
+ R F + +G+G F V A L + A+K+ + + EL
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 108 ILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPR-----------SSKL 155
I+ HL H+NIV L+G C +++ EY G L L R +S
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK--MGFS 213
R+ + + Q+AQ + +L + + +H D+ A N+LL K+ DFG A+ M S
Sbjct: 162 STRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-G 272
+ ++ + P + + + ++DV+S+G++L E+ + G
Sbjct: 219 NYIVKGNARLPVK---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 273 MEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLR 332
+ P G L+ S ++ D ++ P A + + SI C
Sbjct: 264 LN---PYPGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNIYSIMQACWA 305
Query: 333 QSPILRPSATQILHTIKHQ 351
P RP+ QI ++ Q
Sbjct: 306 LEPTHRPTFQQICSFLQEQ 324
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 144
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 145 DLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR-------- 192
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 193 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 52/312 (16%)
Query: 56 RFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELDILL 110
R F + +G+G F V A L + A+K+ + + EL I+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 111 HL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS-------KLPWRNRMA 162
HL H+NIV L+G C +++ EY G L L + L R+ +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK--MGFSSAVLXXX 220
+ Q+AQ + +L + + +H D+ A N+LL K+ DFG A+ M S+ ++
Sbjct: 165 FSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPE 279
+ P + + + ++DV+S+G++L E+ + G+ P
Sbjct: 222 ARLPVK---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---PY 263
Query: 280 NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
G L+ S ++ D ++ P A + + SI C P RP
Sbjct: 264 PGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNIYSIMQACWALEPTHRP 308
Query: 340 SATQILHTIKHQ 351
+ QI ++ Q
Sbjct: 309 TFQQICSFLQEQ 320
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD----RLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY + + + + I + ++ + + F E I+ + H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L+G C L+ + +P+G L E +H + + + Q+A+ + YL ER
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER- 136
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+VH D+ A N+L++ + K+ DFG A++ + + +
Sbjct: 137 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--- 191
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
HY + + ++DV+S+GV + EL+T
Sbjct: 192 -------HYRKF---THQSDVWSYGVTIWELMT 214
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 30/189 (15%)
Query: 104 QELDILLHLS-HDNIVKLIGYC---DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+E+ IL LS H+NIV L+ +DRD L+F+Y ++ LH R++ L +
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRD-VYLVFDY-----METDLHAVIRANILEPVH 110
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ + +QL + I+YLH LH D+K SNILL + K+ DF G S + +
Sbjct: 111 KQYVVYQLIKVIKYLHSGGLLH---RDMKPSNILLNAECHVKVADF-----GLSRSFVNI 162
Query: 220 XXXXXXXXXXITKQVM-----------MIGSPGYTDPHYLRTGMASTK-TDVYSFGVILL 267
I + + + Y P L TK D++S G IL
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222
Query: 268 ELVTGMEAF 276
E++ G F
Sbjct: 223 EILCGKPIF 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 48/236 (20%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKI-------------HVGSDR--LSQVFKQ 104
+F +VIG G F V LAR + + A+K+ H+ S+R L + K
Sbjct: 41 HFLKVIGKGSFGKVLLAR--HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
+ LH S KL D + G L + +E+ PR+ A
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYH-----LQRERCFLEPRAR--------FYA 145
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXX 224
++A A+ YLH +L+IV+ D+K NILL+ + L DFG K
Sbjct: 146 AEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--------- 193
Query: 225 XXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
+ G+P Y P L D + G +L E++ G+ F N
Sbjct: 194 ------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ EY G L+E L P ++ ++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 146
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 147 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 194
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 195 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 8 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--------------- 163
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 112 LSHDNIVKLIGYC----DDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
H N+V+L+ C DR+ V L+FE+V + L+ L P LP + Q
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-PPGLPAETIKDLMRQ 128
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXX 226
+ +++LH C IVH D+K NIL+ KL DFG A++
Sbjct: 129 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI-------------YSY 172
Query: 227 XXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFC 277
+T V+ + Y P L +T D++S G I E+ FC
Sbjct: 173 QMALTPVVVTL---WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 8 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--------------- 163
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 11 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 67
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA-EIVSALEYL 124
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 125 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-------------- 167
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 168 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 8 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--------------- 163
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 8 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-------------- 164
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 8 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-------------- 164
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 29/233 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSH 114
++ +++G G F V L R +T A+KI + D ++ E +L + H
Sbjct: 13 DYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 69
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ L D + EY G L H + R R A ++ A+EYL
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYL 126
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H R +V+ DIK N++L++ + K+ DFG K G S
Sbjct: 127 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--------------- 168
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSL 287
G+P Y P L D + GV++ E++ G F ++ + L L
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 40 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 151
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 193
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ E + NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGAVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK--HKETGNHFAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK--HKETGNHFAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ E + NG+L L ++ + + +A ++YL +
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 186
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 187 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 48 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK--HKETGNHFAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 56 RFTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLS-QVFKQELDILLH 111
R+ +F Q +G GGF V+ A+ N N AIK I + + L+ + +E+ L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAK--NKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 59
Query: 112 LSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR----------- 160
L H IV+ +++ L P L ++ + + W N
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 161 -MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ I Q+A+A+E+LH + ++H D+K SNI K+ DFG
Sbjct: 120 CLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELV 270
T QV G+ Y P + S K D++S G+IL EL+
Sbjct: 177 VLTPMPAYARHTGQV---GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 48 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 48 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLS 99
G S + Y +++R + IG G F +V+ ++ ++ + AIK + SD +
Sbjct: 1 GASTRDY---EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 57
Query: 100 QVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRN 159
+ F QE + H +IVKLIG + +++ E G L+ L R L +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLDLAS 114
Query: 160 RMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXX 219
+ A+QL+ A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 115 LILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 171
Query: 220 XXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 172 -----------SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 45/256 (17%)
Query: 40 GIDGRSVKKY----------SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTS 84
G + SVK++ W++ + T + Q +G+G F V L + + T
Sbjct: 9 GXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETG 66
Query: 85 TNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG 140
+ A+KI +L Q+ E IL ++ +VKL D ++ EYVP G
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 141 TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC 200
+ L R S+ R A Q+ EYLH +L +++ D+K N+L+++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 201 KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVY 260
++ DFG AK + + G+P Y P + + + D +
Sbjct: 181 QVTDFGFAK------------------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 261 SFGVILLELVTGMEAF 276
+ GV++ E+ G F
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+ +V+G+G F V RL + + AIK + VG +++ + F E I+ H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I++L G +++ E + NG+L L ++ + + +A ++YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRGGKIPIR- 215
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G++L E+++
Sbjct: 216 -----WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ FG A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQ----VFKQELDILLHLSHDNIV 118
+VIG G FS V + ++ T A+KI D L + F++E D+L++ I
Sbjct: 67 KVIGRGAFSEVAVVKM--KQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L D + L+ EY G L L + ++P ++ AI+ +H
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAEMARFYLAEIVMAIDSVHR-- 180
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSA-KMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
L VH DIK NILL+ + +L DFGS K+ V + ++ +
Sbjct: 181 -LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV---------------RSLVAV 224
Query: 238 GSPGYTDPHYLRT-------GMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P L+ G + D ++ GV E+ G F
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 128
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDFG + S
Sbjct: 129 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 181
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+G+ Y P L+ S ++D++S G+ L+E+ G
Sbjct: 182 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 68 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 179
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 221
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 33 KTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 90
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R S+ R A Q+ EYLH
Sbjct: 91 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 144
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWTLCG 186
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI-----HVGSDRLS-QVFKQELDILLHLSHDN 116
+VIG G FS V R IN T A+KI S LS + K+E I L H +
Sbjct: 30 EVIGKGAFSVV--RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRS-SKLPWRNRMAIAF--QLAQAIEY 173
IV+L+ ++FE++ L ++ R+ + + +A + Q+ +A+ Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 174 LHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSA-KMGFSSAVLXXXXXXXXXXXX 229
H+ +I+H D+K N+LL N KL DFG A ++G S V
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--------- 193
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+G+P + P ++ DV+ GVIL L++G F
Sbjct: 194 -------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ Y G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 57 FTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGS------DRLSQVFKQ 104
F +N+ +++G G S V R I+ T A+KI GS L + +
Sbjct: 2 FYENYEPKEILGRGVSSVV--RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 105 ELDILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E+DIL +S H NI++L + L+F+ + G L + L L + I
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 116
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
L + I LH+ L+IVH D+K NILL++ +N KL DF GFS +
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF-----GFSCQL------- 161
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMAST------KTDVYSFGVILLELVTGMEAF 276
K + G+P Y P + M + D++S GVI+ L+ G F
Sbjct: 162 ----DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLDLASLILYAYQLST 122
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---------- 169
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 170 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 87
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 148 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 190
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 191 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 40/247 (16%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI---HVGSD 96
G + V K +W+ R Q +GSG + V A ++ T AIK S+
Sbjct: 10 GFYRQEVTKTAWE--VRAVYRDLQPVGSGAYGAVCSA--VDGRTGAKVAIKKLYRPFQSE 65
Query: 97 RLSQVFKQELDILLHLSHDNIVKLIGY------CDDRDEGVLLFEYVPNGTLQEKLHGTP 150
++ +EL +L H+ H+N++ L+ DD + L+ ++ GT KL
Sbjct: 66 LFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--- 120
Query: 151 RSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+ KL + +Q+ + + Y+H I+H D+K N+ + E K+ DFG A+
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 211 GFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLEL 269
S + + + Y P + M T+T D++S G I+ E+
Sbjct: 178 ADS------------------EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 270 VTGMEAF 276
+TG F
Sbjct: 220 ITGKTLF 226
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 91/237 (38%), Gaps = 51/237 (21%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDILLHLSHDNIVKL 120
+G G FS V R + T A KI + + +LS Q ++E I L H NIV+L
Sbjct: 12 LGKGAFSVV--RRCMKIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+F+ V G L E + S+ A A Q I C L
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILESVNHCHL 121
Query: 181 H-IVHGDIKASNILL---EEHLNCKLCDFG---------SAKMGFSSAVLXXXXXXXXXX 227
+ IVH D+K N+LL + KL DFG A GF+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-------------- 167
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P LR D+++ GVIL L+ G F E+ L
Sbjct: 168 ----------GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRL 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 122
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA---------- 169
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 170 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 57 FTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGS------DRLSQVFKQ 104
F +N+ +++G G S V R I+ T A+KI GS L + +
Sbjct: 15 FYENYEPKEILGRGVSSVV--RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 105 ELDILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E+DIL +S H NI++L + L+F+ + G L + L L + I
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 129
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
L + I LH+ L+IVH D+K NILL++ +N KL DF GFS +
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF-----GFSCQL------- 174
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMAST------KTDVYSFGVILLELVTGMEAF 276
K + G+P Y P + M + D++S GVI+ L+ G F
Sbjct: 175 ----DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLDLASLILYAYQLST 122
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---------- 169
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 170 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 87
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R S+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 148 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 190
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 191 -------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 57 FTQNFS--QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGS------DRLSQVFKQ 104
F +N+ +++G G S V R I+ T A+KI GS L + +
Sbjct: 15 FYENYEPKEILGRGVSSVV--RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 105 ELDILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
E+DIL +S H NI++L + L+F+ + G L + L L + I
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 129
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
L + I LH+ L+IVH D+K NILL++ +N KL DF GFS +
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDF-----GFSCQL------- 174
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMAST------KTDVYSFGVILLELVTGMEAF 276
K + G+P Y P + M + D++S GVI+ L+ G F
Sbjct: 175 ----DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ D G A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 63 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLDLASLILYAYQLST 119
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---------- 166
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 167 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 91/237 (38%), Gaps = 51/237 (21%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDILLHLSHDNIVKL 120
+G G FS V R + T A KI + + +LS Q ++E I L H NIV+L
Sbjct: 12 LGKGAFSVV--RRCMKIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
+ L+F+ V G L E + S+ A A Q I C L
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILESVNHCHL 121
Query: 181 H-IVHGDIKASNILL---EEHLNCKLCDFG---------SAKMGFSSAVLXXXXXXXXXX 227
+ IVH D+K N+LL + KL DFG A GF+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-------------- 167
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLL 284
G+PGY P LR D+++ GVIL L+ G F E+ L
Sbjct: 168 ----------GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRL 214
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 131/319 (41%), Gaps = 60/319 (18%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG + + + K
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG----------GK 191
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QLLT-SL 287
++ + + P L+ G+ +T +D++SFGV+L E+ + E P G Q+L +
Sbjct: 192 GLLPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQVLKFVM 246
Query: 288 AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHT 347
G L+ +C +V +L+ +C + +P +RP+ +I++
Sbjct: 247 DGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPKMRPTFLEIVNL 285
Query: 348 IKHQI----SSISFLFSPQ 362
+K + +SF S +
Sbjct: 286 LKDDLHPSFPEVSFFHSEE 304
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE--YVPNGTLQEKLHGTPRSSKLPWRNRM 161
+E+ IL H H+NI+ + R + F Y+ +Q LH + L +
Sbjct: 58 REIKILKHFKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q +A++ LH +++H D+K SN+L+ + + K+CDFG A++ SA
Sbjct: 116 YFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA----- 167
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLEL 269
+ V + + Y P + T ++ DV+S G IL EL
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 48 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EY P G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+++++ K+ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ D G A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 131/319 (41%), Gaps = 60/319 (18%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG + + + K
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG----------GK 190
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QLLT-SL 287
++ + + P L+ G+ +T +D++SFGV+L E+ + E P G Q+L +
Sbjct: 191 GLLPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQVLKFVM 245
Query: 288 AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHT 347
G L+ +C +V +L+ +C + +P +RP+ +I++
Sbjct: 246 DGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPKMRPTFLEIVNL 284
Query: 348 IKHQI----SSISFLFSPQ 362
+K + +SF S +
Sbjct: 285 LKDDLHPSFPEVSFFHSEE 303
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGHRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DF A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 69 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ--VRKYSLDLASLILYAYQLST 125
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---------- 172
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 173 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 41/234 (17%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS------ 113
+ +G G F V +A + D A+ + V + K D++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 114 -HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHG--------------TPRSSKLPWR 158
H NI+ L+G C ++ Y G L+E L P ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP-EEQMTFK 157
Query: 159 NRMAIAFQLAQAIEYL-HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ ++ +QLA+ +EYL ++C +H D+ A N+L+ E+ K+ DFG A+
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR-------- 205
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
T + + + P L + + ++DV+SFGV++ E+ T
Sbjct: 206 --DINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDIL 109
++E +VIG+G F V RL + AIK + VG +++ + F E I+
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H NI+ L G +++ EY+ NG+L L + + + ++
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN--DGQFTVIQLVGMLRGISA 135
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
++YL + + VH D+ A NIL+ +L CK+ DFG ++ VL
Sbjct: 136 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR------VLEDDPEAAYTTRG 186
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ +T P + ++ +DV+S+G+++ E+V+
Sbjct: 187 GKIPIR------WTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ QN S V GSG + +V A + T A+K +LS+ F+
Sbjct: 11 QELNKTIWEVPERY-QNLSPV-GSGAYGSVCAA--FDTKTGLRVAVK------KLSRPFQ 60
Query: 104 ---------QELDILLHLSHDNIVKLIG-YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSS 153
+EL +L H+ H+N++ L+ + R Y+ + L+ +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFS 213
KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ D G A+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR---- 173
Query: 214 SAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
+ + + Y P + M +T D++S G I+ EL+TG
Sbjct: 174 --------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 273 MEAF 276
F
Sbjct: 220 RTLF 223
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+VIG G F V RL + AIK + G +D+ + F E I+ H N
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ L G +++ EY+ NG+L L + + + + ++YL +
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 150 ---MSAVHRDLAARNILVNSNLVCKVSDFGMSR------VLEDDPEAAYTTRGGKIPIR- 199
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G+++ E+++
Sbjct: 200 -----WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 58/321 (18%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELD 107
+ R F + +G+G F V A L + A+K+ + + EL
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 108 ILLHL-SHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRS--------S 153
I+ HL H+NIV L+G C +++ EY G L +++ G S
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 154 KLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK--MG 211
+L R+ + + Q+AQ + +L + + +H D+ A N+LL K+ DFG A+ M
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 212 FSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
S+ ++ + P + + + ++DV+S+G++L E+ +
Sbjct: 219 DSNYIVKGNARLPVK---------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
Query: 272 -GMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALC 330
G+ P G L+ S ++ D ++ P A + + SI C
Sbjct: 264 LGLN---PYPGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNIYSIMQAC 305
Query: 331 LRQSPILRPSATQILHTIKHQ 351
P RP+ QI ++ Q
Sbjct: 306 WALEPTHRPTFQQICSFLQEQ 326
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EY P G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+++++ K+ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 51/315 (16%)
Query: 62 SQVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNI 117
S+ +G G F+ V + I+ ST A K G D +++ + + L S +
Sbjct: 34 SKELGRGKFAVV--RQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR-MAIAFQLAQAIEYLHE 176
+ L ++ E +L+ EY G + P +++ N + + Q+ + + YLH+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLC--LPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 177 RCTLHIVHGDIKASNILLEEHL---NCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITK 232
+IVH D+K NILL + K+ DFG S K+G + + +
Sbjct: 150 N---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---------------R 191
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSML 292
++M G+P Y P L +T TD+++ G+I L+T F E+ Q T L S +
Sbjct: 192 EIM--GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-ETYLNISQV 248
Query: 293 N-DIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHTIKHQ 351
N D ++ + V++ LA DF I +L L ++P RP+A L Q
Sbjct: 249 NVDYSEETFSSVSQ-----LATDF----------IQSL-LVKNPEKRPTAEICLSHSWLQ 292
Query: 352 ISSISFLFSPQKDPS 366
LF P++ S
Sbjct: 293 QWDFENLFHPEETSS 307
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+EL +L + IV G E + E++ G+L + L ++ ++P + +
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 112
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+ + + + YL E+ I+H D+K SNIL+ KLCDF G S ++
Sbjct: 113 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF-----GVSGQLIDEMANE 165
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+G+ Y P L+ S ++D++S G+ L+E+ G
Sbjct: 166 ------------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+VIG G F V RL + AIK + G +D+ + F E I+ H N
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ L G +++ EY+ NG+L L + + + + ++YL +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 129 ---MSYVHRDLAARNILVNSNLVCKVSDFGMSR------VLEDDPEAAYTTRGGKIPIR- 178
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G+++ E+++
Sbjct: 179 -----WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 61 FSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDNI 117
+VIG G F V RL + AIK + G +D+ + F E I+ H NI
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ L G +++ EY+ NG+L L + + + + ++YL +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--DGRFTVIQLVGMLRGIGSGMKYLSD- 134
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
+ VH D+ A NIL+ +L CK+ DFG ++ VL +
Sbjct: 135 --MSYVHRDLAARNILVNSNLVCKVSDFGMSR------VLEDDPEAAYTTRGGKIPIR-- 184
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P + ++ +DV+S+G+++ E+++
Sbjct: 185 ----WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E IL ++ +V
Sbjct: 40 KTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYVP G + L R + R A Q+ EYLH
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH--- 151
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 193
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS-QVFKQELDILL---HLSHDNIV 118
+V+GSG F V+ I + S + I V D+ Q F+ D +L L H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L+G C L+ +Y+P G+L + H L + + Q+A+ + YL E
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+VH ++ A N+LL+ ++ DFG A + + + M +
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADL-----LPPDDKQLLYSEAKTPIKWMALE 205
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFC 277
S + G + ++DV+S+GV + EL+T G E +
Sbjct: 206 S--------IHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 41/239 (17%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQ 104
W++ + T + Q +G+G F V L + + T + A+KI D+ V +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKI---LDKQKVVKLK 83
Query: 105 ELD-------ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
E++ IL ++ +VKL D ++ EY P G + L R S+
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 143
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
R A Q+ EYLH +L +++ D+K N+++++ K+ DFG AK
Sbjct: 144 RFYAA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-------- 189
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 ----------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS-QVFKQELDILL---HLSHDNIV 118
+V+GSG F V+ I + S + I V D+ Q F+ D +L L H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L+G C L+ +Y+P G+L + H L + + Q+A+ + YL E
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+VH ++ A N+LL+ ++ DFG A + + + M +
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADL-----LPPDDKQLLYSEAKTPIKWMALE 187
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFC 277
S + G + ++DV+S+GV + EL+T G E +
Sbjct: 188 S--------IHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSHDNI 117
+ IG G F V + + + T A+K V + + VFK EL I+ L H +
Sbjct: 21 RAIGKGSFGKVCIVQ--KNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLEHPFL 77
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEY 173
V L D ++ ++ + + G L Q+ +H + KL +L A++Y
Sbjct: 78 VNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-------FICELVMALDY 130
Query: 174 LHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
L + I+H D+K NILL+EH + + DF A M T+
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAM----------------LPRETQI 171
Query: 234 VMMIGSPGYTDPHYL--RTGMA-STKTDVYSFGVILLELVTGMEAF 276
M G+ Y P R G S D +S GV EL+ G +
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 446 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 502
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ + KL DFG ++ S
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---------- 549
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 550 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 54 VERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLS 113
V R + ++ G F V+ A+L+ND A+KI D+ S ++E+ +
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFV----AVKIFPLQDKQSWQSEREIFSTPGMK 67
Query: 114 HDNIVKLIGYCDDRD-----EGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
H+N+++ I + R E L+ + G+L + L G + + W +A ++
Sbjct: 68 HENLLQFIA-AEKRGSNLEVELWLITAFHDKGSLTDYLKG----NIITWNELCHVAETMS 122
Query: 169 QAIEYLHE-----RCTLH---IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ + YLHE R H I H D K+ N+LL+ L L DFG A + F
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEPGKPPGD 181
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGM-----ASTKTDVYSFGVILLELVTGMEA 275
+G+ Y P L + A + D+Y+ G++L ELV+ +A
Sbjct: 182 THG------------QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 122
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ KL DFG ++ S
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA---------- 169
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 170 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 45/256 (17%)
Query: 40 GIDGRSVKKY----------SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTS 84
G + SVK++ W++ + T + Q +G+G F V L + + T
Sbjct: 9 GXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETG 66
Query: 85 TNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG 140
+ A+KI +L Q+ E IL ++ +VKL D ++ EYVP G
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 141 TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC 200
+ L R + R A Q+ EYLH +L +++ D+K N+L+++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 201 KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVY 260
++ DFG AK + + G+P Y P + + + D +
Sbjct: 181 QVTDFGFAK------------------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 261 SFGVILLELVTGMEAF 276
+ GV++ E+ G F
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 48/247 (19%)
Query: 44 RSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK 103
+ + K W+ ER+ Q S V GSG + +V S +KI V +LS+ F+
Sbjct: 40 QELNKTIWEVPERY-QTLSPV-GSGAYGSV------CSSYDVKSGLKIAVK--KLSRPFQ 89
Query: 104 ---------QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE----YVPNGTLQEKLHGTP 150
+EL +L H+ H+N+ IG D L E Y+ + L+
Sbjct: 90 SIIHAKRTYRELRLLKHMKHENV---IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV 146
Query: 151 RSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+ KL + + +Q+ + ++Y+H + I+H D+K SN+ + E K+ DFG A+
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 202
Query: 211 GFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLEL 269
+ + + Y P + M T D++S G I+ EL
Sbjct: 203 -----------------HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Query: 270 VTGMEAF 276
+TG F
Sbjct: 246 LTGRTLF 252
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 127/324 (39%), Gaps = 70/324 (21%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------------------DIXET 183
Query: 233 QVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QL 283
G G + P L+ G+ +T +D++SFGV+L E+ + E P G Q+
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQV 241
Query: 284 LT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
L + G L+ +C +V +L+ +C + +P +RP+
Sbjct: 242 LKFVMDGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPKMRPTFL 280
Query: 343 QILHTIKHQI----SSISFLFSPQ 362
+I++ +K + +SF S +
Sbjct: 281 EIVNLLKDDLHPSFPEVSFFHSEE 304
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 126/322 (39%), Gaps = 66/322 (20%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG +
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------------------DIXET 180
Query: 233 QVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCP--ENGQLLT 285
G G + P L+ G+ +T +D++SFGV+L E+ + E N Q+L
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
Query: 286 -SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQI 344
+ G L+ +C +V +L+ +C + +P +RP+ +I
Sbjct: 241 FVMDGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPKMRPTFLEI 279
Query: 345 LHTIKHQI----SSISFLFSPQ 362
++ +K + +SF S +
Sbjct: 280 VNLLKDDLHPSFPEVSFFHSEE 301
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 87
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYVP G + L R + R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY 147
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 148 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 190
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 191 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + T + A+KI +L Q+ E I ++ +V
Sbjct: 48 RTLGTGSFGRVMLVK--HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EY P G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ K+ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 27/224 (12%)
Query: 63 QVIGSGGFSNVYLARLINDS-TSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSHDN 116
+V+G GG+ V+ R + + T A+K+ V + + + K E +IL + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IV LI + L+ EY+ G L +L R +++ A+ +LH+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALGHLHQ 139
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I++ D+K NI+L + KL DFG K +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---------------F 181
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+ Y P L + D +S G ++ +++TG F EN
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI-HVGSDRL-SQVFKQELDILLHLSHDNIVKLIG 122
+G G F +V + AIK+ G+++ ++ +E I+ L + IV+LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
C + +L+ E G L + L G + ++P N + Q++ ++YL E+ +
Sbjct: 78 VCQA-EALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK---NF 131
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAK-MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K +G +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK------------- 178
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P + S+++DV+S+GV + E ++
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 27/224 (12%)
Query: 63 QVIGSGGFSNVYLARLINDS-TSTNGAIKIH-----VGSDRLSQVFKQELDILLHLSHDN 116
+V+G GG+ V+ R + + T A+K+ V + + + K E +IL + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
IV LI + L+ EY+ G L +L R +++ A+ +LH+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALGHLHQ 139
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ I++ D+K NI+L + KL DFG K +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH---------------XF 181
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+ Y P L + D +S G ++ +++TG F EN
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVG--------SDRLSQVFKQELDILLHLSH 114
QVIG+G F V L G +I V +++ + F E I+ H
Sbjct: 39 QVIGAGEFGEVCSGHL-----KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 93
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
N++ L G +++ E++ NG+L L + + + +A ++YL
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYL 151
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ ++ VH D+ A NIL+ +L CK+ DFG ++ L + ++
Sbjct: 152 AD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRF------LEDDTSDPTYTSALGGKI 202
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ +T P ++ ++ +DV+S+G+++ E+++
Sbjct: 203 PI----RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 127/324 (39%), Gaps = 70/324 (21%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH D+ A N ++ K+ DFG +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------------------DIXET 183
Query: 233 QVMMIGSPG-----YTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QL 283
G G + P L+ G+ +T +D++SFGV+L E+ + E P G Q+
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQV 241
Query: 284 LT-SLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSAT 342
L + G L+ +C +V +L+ +C + +P +RP+
Sbjct: 242 LKFVMDGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPNMRPTFL 280
Query: 343 QILHTIKHQI----SSISFLFSPQ 362
+I++ +K + +SF S +
Sbjct: 281 EIVNLLKDDLHPSFPEVSFFHSEE 304
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EY P G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+++++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 45/256 (17%)
Query: 40 GIDGRSVKKY----------SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTS 84
G + SVK++ W++ + T + Q +G+G F V L + + T
Sbjct: 10 GXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETG 67
Query: 85 TNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNG 140
+ A+KI +L Q+ E IL ++ + KL D ++ EY P G
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG 127
Query: 141 TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC 200
+ L R S+ R A Q+ EYLH +L +++ D+K N+++++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 181
Query: 201 KLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVY 260
K+ DFG AK + + G+P Y P + + + D +
Sbjct: 182 KVTDFGFAK------------------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 261 SFGVILLELVTGMEAF 276
+ GV++ E+ G F
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE--YVPNGTLQEKLHGTPRSSKLPWRNRM 161
+E+ IL H H+NI+ + R + F Y+ +Q LH + L +
Sbjct: 58 REIKILKHFKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q +A++ LH +++H D+K SN+L+ + + K+CDFG A++ SA
Sbjct: 116 YFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA--DNS 170
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLEL 269
+T+ V + Y P + T ++ DV+S G IL EL
Sbjct: 171 EPTGQQSGMTEXV---ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE--YVPNGTLQEKLHGTPRSSKLPWRNRM 161
+E+ IL H H+NI+ + R + F Y+ +Q LH + L +
Sbjct: 58 REIKILKHFKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q +A++ LH +++H D+K SN+L+ + + K+CDFG A++ SA
Sbjct: 116 YFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA----- 167
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLEL 269
+ + + Y P + T ++ DV+S G IL EL
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 87
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ + KL D ++ EY P G + L R S+ R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 147
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+++++ K+ DFG AK
Sbjct: 148 AA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 190
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 191 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EY P G + L R + R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+++++ K+ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 41/239 (17%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQ 104
W++ + T + Q +G+G F V L + + T + A+KI D+ V +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKI---LDKQKVVKLK 83
Query: 105 ELD-------ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
E++ IL ++ +VKL D ++ EY P G + L R S+
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 143
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
R A Q+ EYLH +L +++ D+K N+++++ ++ DFG AK
Sbjct: 144 RFYAA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-------- 189
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 ----------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 102 FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
FKQE++I+ L H NI++L +D + L+ E G L E++ K +R
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-----VHKRVFRESD 107
Query: 162 A--IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAV 216
A I + A+ Y H+ L++ H D+K N L KL DFG A +
Sbjct: 108 AARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ +G+P Y P L G+ + D +S GV++ L+ G F
Sbjct: 165 MRTK----------------VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLARLIN-DSTSTNGAIKI--HVGSDRLSQVFKQELDIL 109
+++R + IG G F +V+ ++ ++ + AIK + SD + + F QE +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 110 LHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H +IVKLIG + +++ E G L+ L R L + + A+QL+
Sbjct: 446 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ--VRKFSLDLASLILYAYQLST 502
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+ YL + VH DI A N+L+ KL DFG ++ S
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA---------- 549
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLE-LVTGMEAF 276
+K + I + P + ++ +DV+ FGV + E L+ G++ F
Sbjct: 550 -SKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 131/319 (41%), Gaps = 60/319 (18%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH ++ A N ++ K+ DFG + + + K
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG----------GK 192
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QLLT-SL 287
++ + + P L+ G+ +T +D++SFGV+L E+ + E P G Q+L +
Sbjct: 193 GLLPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQVLKFVM 247
Query: 288 AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHT 347
G L+ +C +V +L+ +C + +P +RP+ +I++
Sbjct: 248 DGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPNMRPTFLEIVNL 286
Query: 348 IKHQI----SSISFLFSPQ 362
+K + +SF S +
Sbjct: 287 LKDDLHPSFPEVSFFHSEE 305
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 102 FKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
FKQE++I+ L H NI++L +D + L+ E G L E++ K +R
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-----VHKRVFRESD 124
Query: 162 A--IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAV 216
A I + A+ Y H+ L++ H D+K N L KL DFG A +
Sbjct: 125 AARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ +G+P Y P L G+ + D +S GV++ L+ G F
Sbjct: 182 MRTK----------------VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 131/319 (41%), Gaps = 60/319 (18%)
Query: 65 IGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRLSQ--VFKQELDILLHLSHDNIVK 119
+G G F VY +I T A+K S L + F E ++ + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHG-TPRSSKLPWR------NRMAIAFQLAQAIE 172
L+G +++ E + +G L+ L P + P R + +A ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 173 YLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITK 232
YL+ + VH ++ A N ++ K+ DFG + + + K
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG----------GK 191
Query: 233 QVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENG----QLLT-SL 287
++ + + P L+ G+ +T +D++SFGV+L E+ + E P G Q+L +
Sbjct: 192 GLLPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--PYQGLSNEQVLKFVM 246
Query: 288 AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQILHT 347
G L+ +C +V +L+ +C + +P +RP+ +I++
Sbjct: 247 DGGYLDQPDNC-PERVTDLM--------------------RMCWQFNPNMRPTFLEIVNL 285
Query: 348 IKHQI----SSISFLFSPQ 362
+K + +SF S +
Sbjct: 286 LKDDLHPSFPEVSFFHSEE 304
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+ +G+G F V+ R+ +T N A K + + + ++E+ + L H +V L
Sbjct: 57 EELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 114
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+D +E V+++E++ G L EK+ +K+ + Q+ + + ++HE +H
Sbjct: 115 DAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 182 IVHGDIKASNILL--EEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+ D+K NI+ + KL DFG +A + +V + G
Sbjct: 173 L---DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-----------------VTTG 212
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
+ + P TD++S GV+ L++G+ F EN
Sbjct: 213 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 28/225 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIV 118
+ + +G+G F V+ R+ +T N A K + + + ++E+ + L H +V
Sbjct: 160 DIHEELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
L +D +E V+++E++ G L EK+ +K+ + Q+ + + ++HE
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 179 TLHIVHGDIKASNILL--EEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXXXITKQVM 235
+H+ D+K NI+ + KL DFG +A + +V +
Sbjct: 276 YVHL---DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-----------------V 315
Query: 236 MIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+ + P TD++S GV+ L++G+ F EN
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
++IG G + VY L A+K+ ++R + + ++ + + + HDNI + I
Sbjct: 19 ELIGRGRYGAVYKGSLDERPV----AVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 123 -----YCDDRDEGVLLFEYVPNGTLQE--KLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
D R E +L+ EY PNG+L + LH + W + +A + + + YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 176 ------ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+ I H D+ + N+L++ C + DFG + M + L
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS-MRLTGNRLVRPGEED----- 182
Query: 230 ITKQVMMIGSPGYTDPHYLRTGM-------ASTKTDVYSFGVILLEL 269
+ +G+ Y P L + A + D+Y+ G+I E+
Sbjct: 183 -NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRL--SQVFKQELDILLHLSHDNI 117
++++G G F VY N N A+K L + F E I+ +L H +I
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
VKLIG ++ +++ E P G L L S K+ + + Q+ +A+ YL
Sbjct: 88 VKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-- 142
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+++ VH DI NIL+ KL DFG ++
Sbjct: 143 -SINCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 34 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 92 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 145
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L++E ++ DFG AK + + G
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK------------------RVKGRTWXLCG 187
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRL--SQVFKQELDILLHLSHDNI 117
++++G G F VY N N A+K L + F E I+ +L H +I
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
VKLIG ++ +++ E P G L L S K+ + + Q+ +A+ YL
Sbjct: 72 VKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-- 126
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+++ VH DI NIL+ KL DFG ++
Sbjct: 127 -SINCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 61 FSQVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRL--SQVFKQELDILLHLSHDNI 117
++++G G F VY N N A+K L + F E I+ +L H +I
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
VKLIG ++ +++ E P G L L S K+ + + Q+ +A+ YL
Sbjct: 76 VKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-- 130
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+++ VH DI NIL+ KL DFG ++
Sbjct: 131 -SINCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 60 NFSQVIGSGGFSNVYLARL-INDSTSTNGAIK-IHVG-SDRLSQVFKQELDILLHLSHDN 116
+VIG+G F V RL + AIK + VG +++ + F E I+ H N
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+V L G +++ E++ NG L L + + + +A + YL +
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLR--KHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM--GFSSAVLXXXXXXXXXXXXITKQV 234
+ VH D+ A NIL+ +L CK+ DFG +++ AV
Sbjct: 164 ---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR------- 213
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+T P ++ ++ +DV+S+G+++ E+++
Sbjct: 214 -------WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 52/253 (20%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS 99
G + + K W+ +R Q V GSG + +V ++ + ++ V +LS
Sbjct: 13 GFYRQELNKTVWEVPQRL-QGLRPV-GSGAYGSV--------CSAYDARLRQKVAVKKLS 62
Query: 100 QVFK---------QELDILLHLSHDNIVKLIGY------CDDRDEGVLLFEYVPNGTLQE 144
+ F+ +EL +L HL H+N++ L+ +D E Y+ +
Sbjct: 63 RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEV-----YLVTTLMGA 117
Query: 145 KLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCD 204
L+ +S L + + +QL + ++Y+H + I+H D+K SN+ + E ++ D
Sbjct: 118 DLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILD 174
Query: 205 FGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFG 263
FG A+ + + + Y P + M +T D++S G
Sbjct: 175 FGLARQADE------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 264 VILLELVTGMEAF 276
I+ EL+ G F
Sbjct: 217 CIMAELLQGKALF 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 117/306 (38%), Gaps = 52/306 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G F V+ R+ + T A+K RL +EL L+ IV L G
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVK----KVRLEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ + E + G+L + + LP + Q + +EYLH R I+H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILH 208
Query: 185 GDIKASNILL-EEHLNCKLCDFGSAKM----GFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
GD+KA N+LL + + LCDFG A G ++L + G+
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD--------------YIPGT 254
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P + K DV+S ++L ++ G + G + IA E
Sbjct: 255 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW-------TQFFRGPLCLKIAS-E 306
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAAL--CLRQSPILRPSATQILHTIKHQISSISF 357
V E + + A L+ A+ LR+ PI R SA ++ + + +
Sbjct: 307 PPPVRE-----------IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGG 355
Query: 358 LFSPQK 363
L SP +
Sbjct: 356 LKSPWR 361
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 28/219 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-----IHVGSDRLSQVFKQELDILLHLSHDNI 117
+++G G F V+LA T+ AIK + + D + ++ + L H +
Sbjct: 23 KMLGKGSFGKVFLAEF--KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ ++ + EY+ G L ++ K A ++ +++LH +
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IV+ D+K NILL++ + K+ DFG K K
Sbjct: 138 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNXFC 179
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P L + D +SFGV+L E++ G F
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 18 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNLNKVRVAIKKISPFEHQT 67
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 68 YXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 22 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 71
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 72 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 131
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 132 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 14 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 63
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 34 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 83
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 84 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 143
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 248
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 86
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ +VKL D ++ EYV G + L R S+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+L+++ ++ DFG AK
Sbjct: 147 AA---QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 190 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 125/328 (38%), Gaps = 65/328 (19%)
Query: 53 DVERFTQNFSQVIGSGGFSNVYLAR---LINDSTSTNGAIKIHVGSDRL--SQVFKQELD 107
+ R F + +G+G F V A L + A+K+ + + EL
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 108 ILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKL------------------HG 148
I+ HL H+NIV L+G C +++ EY G L L G
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 149 TPRSSKLPWRNRMAIAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG 206
+ P R + F Q+AQ + +L + + +H D+ A N+LL K+ DFG
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 207 SAK--MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGV 264
A+ M S+ ++ + P + + + ++DV+S+G+
Sbjct: 204 LARDIMNDSNYIVKGNARLPVK---------------WMAPESIFDCVYTVQSDVWSYGI 248
Query: 265 ILLELVT-GMEAFCPENGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAM 323
+L E+ + G+ P G L+ S ++ D ++ P A + +
Sbjct: 249 LLWEIFSLGLN---PYPGILVNSKFYKLVKD--------GYQMAQPAFA-------PKNI 290
Query: 324 LSIAALCLRQSPILRPSATQILHTIKHQ 351
SI C P RP+ QI ++ Q
Sbjct: 291 YSIMQACWALEPTHRPTFQQICSFLQEQ 318
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 16 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 65
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 66 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQ----ELDILLHLSHDN 116
IG G + V ++ + K+ V ++S Q + Q E+ ILL H+N
Sbjct: 31 IGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ + + Y+ ++ L+ ++ L + +Q+ + ++Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH- 141
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ +++H D+K SN+LL + K+CDFG A++ +M
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ S GYT D++S G IL E+++ F
Sbjct: 200 LNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI-HVGSDRL-SQVFKQELDILLHLSHDNIVKLIG 122
+G G F +V + AIK+ G+++ ++ +E I+ L + IV+LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 123 YCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHI 182
C + +L+ E G L + L G + ++P N + Q++ ++YL E+ +
Sbjct: 404 VCQA-EALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK---NF 457
Query: 183 VHGDIKASNILLEEHLNCKLCDFGSAK-MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH ++ A N+LL K+ DFG +K +G +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK------------- 504
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P + S+++DV+S+GV + E ++
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIV 118
S ++G G +NV+ R + T AIK+ ++ R V +E ++L L+H NIV
Sbjct: 13 LSDILGQGATANVFRGR--HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 119 KLIGYCDDRD--EGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
KL ++ VL+ E+ P G+L L + LP + + + + +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 177 RCTLHIVHGDIKASNILL----EEHLNCKLCDFGSAK 209
IVH +IK NI+ + KL DFG+A+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 28/216 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G + VY A+ I++ + + +E+ +L L H NIV LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 125 DDRDEGVLLFEYVPNG---TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
L+FE++ L E G S +QL + + + H+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDS------QIKIYLYQLLRGVAHCHQH---R 139
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
I+H D+K N+L+ KL DFG A+ F V T +V+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV-----------RSYTHEVVTL---W 184
Query: 242 YTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
Y P L + ST D++S G I E++TG F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQ----ELDILLHLSHDN 116
IG G + V ++ + K+ V ++S Q + Q E+ ILL H+N
Sbjct: 31 IGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ + + Y+ ++ L+ ++ L + +Q+ + ++Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH- 141
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ +++H D+K SN+LL + K+CDFG A++ +M
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ S GYT D++S G IL E+++ F
Sbjct: 200 LNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHLSHDNIV 118
S ++G G +NV+ R + T AIK+ ++ R V +E ++L L+H NIV
Sbjct: 13 LSDILGQGATANVFRGR--HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 119 KLIGYCDDRD--EGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
KL ++ VL+ E+ P G+L L + LP + + + + +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 177 RCTLHIVHGDIKASNILL----EEHLNCKLCDFGSAK 209
IVH +IK NI+ + KL DFG+A+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 42/248 (16%)
Query: 49 YSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--------Q 100
+ +DVE + + +GSG F+ V R T A K + RLS +
Sbjct: 5 FRQEDVEDHYE-MGEELGSGQFAIVRKCR--QKGTGKEYAAKF-IKKRRLSSSRRGVSRE 60
Query: 101 VFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
++E++IL + H NI+ L +++ + VL+ E V G L + L + K
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTED 115
Query: 161 MAIAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEE----HLNCKLCDFGSAKMGFSS 214
A F Q+ + YLH + I H D+K NI+L + + KL DFG A +
Sbjct: 116 EATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
+ G+P + P + + D++S GVI L++G
Sbjct: 173 NEFKN----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 275 AFCPENGQ 282
F E Q
Sbjct: 217 PFLGETKQ 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 40/224 (17%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQELDILLHLSHD 115
F IG G F VY D+ +T + +L+ Q FK+E + L L H
Sbjct: 29 KFDIEIGRGSFKTVYKGL---DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP 85
Query: 116 NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAI 171
NIV+ + +G VL+ E +GTL+ L R + + Q+ + +
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK---RFKVXKIKVLRSWCRQILKGL 142
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHL-NCKLCDFGSA---KMGFSSAVLXXXXXXXXXX 227
++LH R T I+H D+K NI + + K+ D G A + F+ AV
Sbjct: 143 QFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV----------- 190
Query: 228 XXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
IG+P + P + DVY+FG LE T
Sbjct: 191 ---------IGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXAT 224
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 28/216 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G + VY A+ I++ + + +E+ +L L H NIV LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 125 DDRDEGVLLFEYVPNG---TLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
L+FE++ L E G S +QL + + + H+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDS------QIKIYLYQLLRGVAHCHQH---R 139
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
I+H D+K N+L+ KL DFG A+ F V T +V+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV-----------RSYTHEVVTL---W 184
Query: 242 YTDPHYLR-TGMASTKTDVYSFGVILLELVTGMEAF 276
Y P L + ST D++S G I E++TG F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 191 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQ----ELDILLHLSHDN 116
IG G + V ++ + K+ V ++S Q + Q E+ ILL H+N
Sbjct: 31 IGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ + + Y+ ++ L+ ++ L + +Q+ + ++Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH- 141
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ +++H D+K SN+LL + K+CDFG A++ +M
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ S GYT D++S G IL E+++ F
Sbjct: 200 LNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 192 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 135
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 136 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 193 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 126
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 127 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 184 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 191 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 42/248 (16%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS 99
G + + K W+ +R Q V GSG + +V ++ + ++ V +LS
Sbjct: 5 GFYRQELNKTVWEVPQRL-QGLRPV-GSGAYGSV--------CSAYDARLRQKVAVKKLS 54
Query: 100 QVFK---------QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE-YVPNGTLQEKLHGT 149
+ F+ +EL +L HL H+N++ L+ E Y+ + L+
Sbjct: 55 RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI 114
Query: 150 PRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+ L + + +QL + ++Y+H + I+H D+K SN+ + E ++ DFG A+
Sbjct: 115 VKCQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
Query: 210 MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLE 268
+ + + Y P + M +T D++S G I+ E
Sbjct: 172 QADE------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 269 LVTGMEAF 276
L+ G F
Sbjct: 214 LLQGKALF 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 191 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 28/219 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-----IHVGSDRLSQVFKQELDILLHLSHDNI 117
+++G G F V+LA T+ AIK + + D + ++ + L H +
Sbjct: 24 KMLGKGSFGKVFLAEF--KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 81
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHER 177
+ ++ + EY+ G L ++ K A ++ +++LH +
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
IV+ D+K NILL++ + K+ DFG K K
Sbjct: 139 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNEFC 180
Query: 238 GSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
G+P Y P L + D +SFGV+L E++ G F
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 185 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 185 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 16 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 65
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 230
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFK--QELDILLHLSHDNIVK 119
+ IG+G + V AR T AIK I D ++ + +EL IL H HDNI+
Sbjct: 60 ETIGNGAYGVVSSAR--RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 120 L-------IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSK-LPWRNRMAIAFQLAQAI 171
+ + Y + + V+L ++ LH SS+ L + +QL + +
Sbjct: 118 IKDILRPTVPYGEFKSVYVVL------DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+Y+H + ++H D+K SN+L+ E+ K+ DFG A+
Sbjct: 172 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 191 XVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
++ +FQ+A+ +E+L R +H D+ A NILL E+ K+CDFG A+ + +
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ P + + STK+DV+S+GV+L E+ +
Sbjct: 259 GDTRLPLK-------------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ ++ L +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 192 XVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 233
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 95/236 (40%), Gaps = 35/236 (14%)
Query: 50 SWDDVERFTQNFSQ-----VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVF 102
W++ + T + Q +G+G F V L + + T + A+KI +L Q+
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM--ETGNHYAMKILDKQKVVKLKQIE 87
Query: 103 K--QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR 160
E IL ++ + KL D ++ EY P G + L R + R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY 147
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
A Q+ EYLH +L +++ D+K N+++++ K+ DFG AK
Sbjct: 148 AA---QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 190
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ + G+P Y P + + + D ++ GV++ E+ G F
Sbjct: 191 -------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLAG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFK--QELDILLHLSHDNIVK 119
+ IG+G + V AR T AIK I D ++ + +EL IL H HDNI+
Sbjct: 61 ETIGNGAYGVVSSAR--RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 118
Query: 120 L-------IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSK-LPWRNRMAIAFQLAQAI 171
+ + Y + + V+L ++ LH SS+ L + +QL + +
Sbjct: 119 IKDILRPTVPYGEFKSVYVVL------DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 172 EYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+Y+H + ++H D+K SN+L+ E+ K+ DFG A+
Sbjct: 173 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 48 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 159
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 201
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 31/230 (13%)
Query: 59 QNFS--QVIGSGGFSNVYLARLIND-STSTNGAIKIH-----VGSDRLSQVFKQELDILL 110
+NF +V+G+G + V+L R I+ T A+K+ V + ++ + E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 111 HLSHDNIVKLIGYCDDRDEGV-LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
H+ + + Y + + L+ +Y+ G L L R ++ ++
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE---HEVQIYVGEIVL 170
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
A+E+LH+ L I++ DIK NILL+ + + L DFG +K +
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET------------- 214
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMAS--TKTDVYSFGVILLELVTGMEAFC 277
+ G+ Y P +R G + D +S GV++ EL+TG F
Sbjct: 215 -ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLXG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 116/306 (37%), Gaps = 52/306 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G F V+ R+ + T A+K RL +EL L+ IV L G
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVK----KVRLEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ + E + G+L + + LP + Q + +EYLH R I+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILH 189
Query: 185 GDIKASNILL-EEHLNCKLCDFGSAKM----GFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
GD+KA N+LL + + LCDFG A G +L + G+
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD--------------YIPGT 235
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDIADCE 299
+ P + K DV+S ++L ++ G + G + IA E
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW-------TQFFRGPLCLKIAS-E 287
Query: 300 ATKVNELVDPRLAGDFDLDEARAMLSIAAL--CLRQSPILRPSATQILHTIKHQISSISF 357
V E + + A L+ A+ LR+ PI R SA ++ + + +
Sbjct: 288 PPPVRE-----------IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGG 336
Query: 358 LFSPQK 363
L SP +
Sbjct: 337 LKSPWR 342
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 25/240 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 437 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 489
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 537
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL--AGSMLNDIADC 298
+ P + S+K+DV+SFGV++ E + G + + G +T++ G + A C
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 597
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS--------QVFKQELDILLHLSH 114
+ +GSG F+ V R T A K + RLS + ++E++IL + H
Sbjct: 11 EELGSGQFAIVRKCR--QKGTGKEYAAKF-IKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAF--QLAQAIE 172
NI+ L +++ + VL+ E V G L + L + K A F Q+ +
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVH 122
Query: 173 YLHERCTLHIVHGDIKASNILLEE----HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXX 228
YLH + I H D+K NI+L + + KL DFG A +
Sbjct: 123 YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--------- 170
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+ G+P + P + + D++S GVI L++G F E Q
Sbjct: 171 -------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 25/240 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 438 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 490
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 538
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL--AGSMLNDIADC 298
+ P + S+K+DV+SFGV++ E + G + + G +T++ G + A C
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 598
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G F V+ R+ + T A+K RL +EL LS IV L G
Sbjct: 66 VGRGSFGEVH--RMKDKQTGFQCAVK----KVRLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ + E + G+L + + + LP + Q + +EYLH R I+H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RILH 173
Query: 185 GDIKASNILL-EEHLNCKLCDFGSA 208
GD+KA N+LL + LCDFG A
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ ILL H+NI+ + + Y+ ++ L+ + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF 133
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
+Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 191 YVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 115
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 173 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 276 FCPENGQ 282
F + Q
Sbjct: 216 FLGDTKQ 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 115
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 173 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 276 FCPENGQ 282
F + Q
Sbjct: 216 FLGDTKQ 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 93 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 145
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 193
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 79 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 131
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENXYKAQTHGKWPVK 179
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G F V+ R+ + T A+K RL +EL LS IV L G
Sbjct: 82 VGRGSFGEVH--RMKDKQTGFQCAVK----KVRLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ + E + G+L + + + LP + Q + +EYLH R I+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RILH 189
Query: 185 GDIKASNILL-EEHLNCKLCDFGSA 208
GD+KA N+LL + LCDFG A
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 47/244 (19%)
Query: 65 IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSH--------- 114
+G G FS V+LA+ ++N +T+ A+KI G ++ + E+ +L ++
Sbjct: 27 LGWGHFSTVWLAKDMVN---NTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 115 --DNIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
++I+KL+ + + + V++FE + L L +P I+ QL
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLL 141
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLE-----EHL-NCKLCDFGSAKMGFSSAVLXXXXX 222
++Y+H RC I+H DIK N+L+E E+L K+ D G+A
Sbjct: 142 LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-------------- 185
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
I + Y P L D++S ++ EL+TG F P+ G
Sbjct: 186 ----CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 283 LLTS 286
T
Sbjct: 242 SYTK 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 95 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 147
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 195
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 95 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 147
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 195
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 28/226 (12%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIH----VGSDRLSQVFKQELDILLHLSHD 115
NF V+G G F V LA T AIKI V D + E +L L
Sbjct: 22 NFLMVLGKGSFGKVMLAD--RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 116 NIVKLIGYC-DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+ + C D + EYV G L ++ + K + A +++ + +L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
H+R I++ D+K N++L+ + K+ DFG K V T++
Sbjct: 137 HKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-------------TTRE- 179
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
G+P Y P + D +++GV+L E++ G F E+
Sbjct: 180 -FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 79 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 131
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 179
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 62 SQVIGSGGFSNVYLA-RLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
S+++G G ++ V A L N I+ G R S+VF++ + + NI++L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR-SRVFREVETLYQCQGNKNILEL 76
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
I + +D L+FE + G++ L + R + +A A+++LH T
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLH---TK 130
Query: 181 HIVHGDIKASNILLE--EHLN-CKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
I H D+K NIL E E ++ K+CDF S + +T
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDF-----DLGSGMKLNNSCTPITTPELTTPC--- 182
Query: 238 GSPGYTDPHYLR--TGMAS---TKTDVYSFGVILLELVTGMEAF 276
GS Y P + T A+ + D++S GV+L +++G F
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 16 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 65
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ ++ L+ ++ L
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 73 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 125
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 173
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 220
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 47/244 (19%)
Query: 65 IGSGGFSNVYLAR-LINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSH--------- 114
+G G FS V+LA+ ++N +T+ A+KI G ++ + E+ +L ++
Sbjct: 27 LGWGHFSTVWLAKDMVN---NTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 115 --DNIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
++I+KL+ + + + V++FE + L L +P I+ QL
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLL 141
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLE-----EHL-NCKLCDFGSAKMGFSSAVLXXXXX 222
++Y+H RC I+H DIK N+L+E E+L K+ D G+A
Sbjct: 142 LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-------------- 185
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
I + Y P L D++S ++ EL+TG F P+ G
Sbjct: 186 ----CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 283 LLTS 286
T
Sbjct: 242 SYTK 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 42/248 (16%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS 99
G + + K W+ +R Q V GSG + +V ++ + ++ V +LS
Sbjct: 13 GFYRQELNKTVWEVPQRL-QGLRPV-GSGAYGSV--------CSAYDARLRQKVAVKKLS 62
Query: 100 QVFK---------QELDILLHLSHDNIVKLIGYCDDRDEGVLLFE-YVPNGTLQEKLHGT 149
+ F+ +EL +L HL H+N++ L+ E Y+ + L+
Sbjct: 63 RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI 122
Query: 150 PRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+ L + + +QL + ++Y+H + I+H D+K SN+ + E ++ DFG A+
Sbjct: 123 VKCQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
Query: 210 MGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLE 268
+ + + Y P + M +T D++S G I+ E
Sbjct: 180 QADE------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 269 LVTGMEAF 276
L+ G F
Sbjct: 222 LLQGKALF 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 75 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 127
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 175
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
Query: 65 IGSGGFSNV---YLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+GSG F V Y T +K L E +++ L + IV++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
G C+ + +L+ E G L + L ++ + +N + + Q++ ++YL E +
Sbjct: 85 GICE-AESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES---N 137
Query: 182 IVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPG 241
VH D+ A N+LL K+ DFG +K Q
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSK------------ALRADENYYKAQTHGKWPVK 185
Query: 242 YTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENGQLLTSL 287
+ P + S+K+DV+SFGV++ E + G + + G +T++
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 104 QELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAI 163
+E+ +L L H NIV L L+FEY+ + L++ L + + N
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDC--GNIINMHNVKLF 105
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
FQL + + Y H + ++H D+K N+L+ E KL DFG A+ + ++
Sbjct: 106 LFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDN 159
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+++GS Y ST+ D++ G I E+ TG F
Sbjct: 160 EVVTLWYRPPDILLGSTDY-----------STQIDMWGVGCIFYEMATGRPLF 201
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVG--------SDRLSQVFKQELDILLHLSH 114
QVIG+G F V L G +I V +++ + F E I+ H
Sbjct: 13 QVIGAGEFGEVCSGHL-----KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 67
Query: 115 DNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
N++ L G +++ E++ NG+L L + + + +A ++YL
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYL 125
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+ ++ VH + A NIL+ +L CK+ DFG ++ L + ++
Sbjct: 126 AD---MNYVHRALAARNILVNSNLVCKVSDFGLSRF------LEDDTSDPTYTSALGGKI 176
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+ +T P ++ ++ +DV+S+G+++ E+++
Sbjct: 177 PI----RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 68 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 179
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW------------------TLCG 221
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
+G G F V+ R+ + T A+K RL +EL LS IV L G
Sbjct: 80 LGRGSFGEVH--RMKDKQTGFQCAVK----KVRLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 125 DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVH 184
+ + E + G+L + + + LP + Q + +EYLH R I+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RILH 187
Query: 185 GDIKASNILL-EEHLNCKLCDFGSA 208
GD+KA N+LL + LCDFG A
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R ++ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
A ++ +E++H R +V+ D+K +NILL+EH + ++ D G A FS
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA-CDFSK--------- 344
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF---CPE 279
K +G+ GY P L+ G+A + D +S G +L +L+ G F +
Sbjct: 345 -------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 280 NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
+ + + +M ++ D + ++ L++ L D++ L A +++SP R
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR--DVNRRLGCLGRGAQEVKESPFFRS 455
Query: 340 SATQILHTIKH 350
Q++ K+
Sbjct: 456 LDWQMVFLQKY 466
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
A ++ +E++H R +V+ D+K +NILL+EH + ++ D G A FS
Sbjct: 297 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA-CDFSK--------- 343
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF---CPE 279
K +G+ GY P L+ G+A + D +S G +L +L+ G F +
Sbjct: 344 -------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
Query: 280 NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
+ + + +M ++ D + ++ L++ L D++ L A +++SP R
Sbjct: 397 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR--DVNRRLGCLGRGAQEVKESPFFRS 454
Query: 340 SATQILHTIKH 350
Q++ K+
Sbjct: 455 LDWQMVFLQKY 465
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
IA + +A+E+LH + L ++H D+K SN+L+ K+CDFG + S
Sbjct: 158 IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA------ 209
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
I +P +P + G S K+D++S G+ ++EL
Sbjct: 210 -----KTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIEL 250
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+++++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ ++ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 30/186 (16%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E++IL + H NI+ L +++ + VL+ E V G L + L + K A
Sbjct: 77 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEA 131
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEE----HLNCKLCDFGSAKMGFSSAV 216
F Q+ + YLH + I H D+K NI+L + + KL DFG A +
Sbjct: 132 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 217 LXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ G+P + P + + D++S GVI L++G F
Sbjct: 189 FKN----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 277 CPENGQ 282
E Q
Sbjct: 233 LGETKQ 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI---HVGSDRLSQVFKQELD 107
++DV + ++ V+G G + V IN TS A+KI G R S+VF+ E++
Sbjct: 10 FEDVYQLQED---VLGEGAHARVQTC--INLITSQEYAVKIIEKQPGHIR-SRVFR-EVE 62
Query: 108 ILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+L H N+++LI + ++ D L+FE + G++ +H ++L +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL---EASVVVQD 119
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLN----CKLCDFGSAKMGFSSAVLXXXXX 222
+A A+++LH + I H D+K NIL EH N K+CDFG S L
Sbjct: 120 VASALDFLHNK---GIAHRDLKPENILC-EHPNQVSPVKICDFGLG----SGIKLNGDCS 171
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYL-----RTGMASTKTDVYSFGVILLELVTGMEAF 276
+T GS Y P + + + D++S GVIL L++G F
Sbjct: 172 PISTPELLTP----CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
A ++ +E++H R +V+ D+K +NILL+EH + ++ D G A FS
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA-CDFSK--------- 344
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF---CPE 279
K +G+ GY P L+ G+A + D +S G +L +L+ G F +
Sbjct: 345 -------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 280 NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
+ + + +M ++ D + ++ L++ L D++ L A +++SP R
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR--DVNRRLGCLGRGAQEVKESPFFRS 455
Query: 340 SATQILHTIKH 350
Q++ K+
Sbjct: 456 LDWQMVFLQKY 466
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 AFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXX 223
A ++ +E++H R +V+ D+K +NILL+EH + ++ D G A FS
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA-CDFSK--------- 344
Query: 224 XXXXXXITKQVMMIGSPGYTDPHYLRTGMA-STKTDVYSFGVILLELVTGMEAF---CPE 279
K +G+ GY P L+ G+A + D +S G +L +L+ G F +
Sbjct: 345 -------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 280 NGQLLTSLAGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRP 339
+ + + +M ++ D + ++ L++ L D++ L A +++SP R
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR--DVNRRLGCLGRGAQEVKESPFFRS 455
Query: 340 SATQILHTIKH 350
Q++ K+
Sbjct: 456 LDWQMVFLQKY 466
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS-QVFKQELD---ILLHLSHDNIV 118
+V+GSG F VY I D + + I V + S + K+ LD ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
+L+G C L+ + +P G L + H +L ++ + Q+A+ + YL +
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+ +VH D+ A N+L++ + K+ DFG A++
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R + R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R + R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R + R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 42 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R + R A Q+ EYLH
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYLH--- 153
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 195
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
++E+ IL + H N++ L +++ + +L+ E V G L + L + K A
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKESLTEEEA 116
Query: 163 IAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEH----LNCKLCDFGSA-KMGFSSA 215
F Q+ + YLH +L I H D+K NI+L + K+ DFG A K+ F +
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEA 275
+ G+P + P + + D++S GVI L++G
Sbjct: 174 FKN-----------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 276 FCPENGQ 282
F + Q
Sbjct: 217 FLGDTKQ 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 32/239 (13%)
Query: 46 VKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QV 101
V+ +D R+T N S IG G + V ++ + K+ V ++S Q
Sbjct: 34 VRGQVFDVGPRYT-NLS-YIGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQT 83
Query: 102 FKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPW 157
+ Q E+ ILL H+NI+ + + Y+ + L+ ++ L
Sbjct: 84 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN 143
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVL 217
+ +Q+ + ++Y+H + +++H D+K SN+LL + K+CDFG A++
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+M+ S GYT D++S G IL E+++ F
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 248
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 68 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R + + A Q+ EYLH
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLH--- 179
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 221
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P Y P + + + D ++ GV++ E+ G F
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 46/226 (20%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYC 124
IG G + V++ + + A+K+ ++ S + E+ + + H+NI+ I
Sbjct: 45 IGKGRYGEVWMGKWRGEKV----AVKVFFTTEEASWFRETEIYQTVLMRHENILGFIA-A 99
Query: 125 DDRDEG-----VLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC- 178
D + G L+ +Y NG+L + L +S+ L ++ + +A+ + +LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 179 ----TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
I H D+K+ NIL++++ C + D G A S T +V
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD----------------TNEV 199
Query: 235 -----MMIGSPGYTDPHYLRTGM------ASTKTDVYSFGVILLEL 269
+G+ Y P L + + D+YSFG+IL E+
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 50/128 (39%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 201 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR----------- 246
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFG 263
Y DP Y+R G A + ++DV+SFG
Sbjct: 247 -------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 287
Query: 264 VILLELVT 271
V+L E+ +
Sbjct: 288 VLLWEIFS 295
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI-----HVGSDRLS-QVFKQELDILLHLSHDN 116
+VIG G FS V R IN T A+KI S LS + K+E I L H +
Sbjct: 32 EVIGKGPFSVV--RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRS-SKLPWRNRMAIAF--QLAQAIEY 173
IV+L+ ++FE++ L ++ R+ + + +A + Q+ +A+ Y
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 174 LHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSA-KMGFSSAVLXXXXXXXXXXXX 229
H+ +I+H D+K +LL N KL FG A ++G S V
Sbjct: 148 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--------- 195
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+G+P + P ++ DV+ GVIL L++G F
Sbjct: 196 -------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI-----HVGSDRLS-QVFKQELDILLHLSHDN 116
+VIG G FS V R IN T A+KI S LS + K+E I L H +
Sbjct: 30 EVIGKGPFSVV--RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRS-SKLPWRNRMAIAF--QLAQAIEY 173
IV+L+ ++FE++ L ++ R+ + + +A + Q+ +A+ Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 174 LHERCTLHIVHGDIKASNILLEEHLN---CKLCDFGSA-KMGFSSAVLXXXXXXXXXXXX 229
H+ +I+H D+K +LL N KL FG A ++G S V
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--------- 193
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+G+P + P ++ DV+ GVIL L++G F
Sbjct: 194 -------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDRLSQVFKQELDILLHLSHDNIVKLI 121
+ +GSG F V+ R + +T K I+ K E+ I+ L H ++ L
Sbjct: 57 EELGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 122 GYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLH 181
+D+ E VL+ E++ G L +++ K+ + Q + ++++HE
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 182 IVHGDIKASNILLE--EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
IVH DIK NI+ E + + K+ DFG A ++ +T +
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-----------KVTTATAEFAA 218
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
P D TD+++ GV+ L++G+ F E+
Sbjct: 219 PEIVD-----REPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 50/128 (39%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 203 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR----------- 248
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFG 263
Y DP Y+R G A + ++DV+SFG
Sbjct: 249 -------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 289
Query: 264 VILLELVT 271
V+L E+ +
Sbjct: 290 VLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 50/128 (39%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 196 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR----------- 241
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFG 263
Y DP Y+R G A + ++DV+SFG
Sbjct: 242 -------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 282
Query: 264 VILLELVT 271
V+L E+ +
Sbjct: 283 VLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 50/128 (39%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ +FQ+A+ +E+L R +H D+ A NILL E K+CDFG A+
Sbjct: 194 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR----------- 239
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMA-----------------STKTDVYSFG 263
Y DP Y+R G A + ++DV+SFG
Sbjct: 240 -------------------DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 280
Query: 264 VILLELVT 271
V+L E+ +
Sbjct: 281 VLLWEIFS 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+R +VH D+ A N+L++ + K+ DFG AK+ + + +
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL-----LGAEEKEYHAEGGKVPIKW 187
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
M + S + + + ++DV+S+GV + EL+T
Sbjct: 188 MALES--------ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 85 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 138 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
IA + +A+E+LH + L ++H D+K SN+L+ K+CDFG + G+
Sbjct: 114 IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGIS--GY---------L 160
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
I +P +P + G S K+D++S G+ ++EL
Sbjct: 161 VDDVAKDIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIEL 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK-MGFSSAVLXXXXXXXXXXXXITKQ 233
+R +VH D+ A N+L++ + K+ DFG AK +G +
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
++ H + T ++DV+S+GV + EL+T
Sbjct: 193 IL----------HRIYT----HQSDVWSYGVTVWELMT 216
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 41/245 (16%)
Query: 56 RFTQN---FSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELD 107
R T N + +++G G F V L + +T A+KI V D ++ E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 200
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRSSKLPWRNRMA 162
+L + H + L D + EY G L +E++ R+
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR--------F 252
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ A++YLH ++V+ D+K N++L++ + K+ DFG K G
Sbjct: 253 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 308
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
G+P Y P L D + GV++ E++ G F ++ +
Sbjct: 309 -------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
Query: 283 LLTSL 287
L L
Sbjct: 356 KLFEL 360
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 41/245 (16%)
Query: 56 RFTQN---FSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELD 107
R T N + +++G G F V L + +T A+KI V D ++ E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 203
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRSSKLPWRNRMA 162
+L + H + L D + EY G L +E++ R+
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR--------F 255
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ A++YLH ++V+ D+K N++L++ + K+ DFG K G
Sbjct: 256 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 311
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
G+P Y P L D + GV++ E++ G F ++ +
Sbjct: 312 -------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
Query: 283 LLTSL 287
L L
Sbjct: 359 KLFEL 363
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSD--RLSQVFK--QELDILLHLSHDNIV 118
+ +G+G F V L + + + + A+KI +L Q+ E IL ++ +V
Sbjct: 47 KTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERC 178
KL D ++ EYV G + L R S+ R A Q+ EYLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH--- 158
Query: 179 TLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+L +++ D+K N+L+++ ++ DFG AK + + G
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------RVKGRTWXLCG 200
Query: 239 SPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+P P + + + D ++ GV++ E+ G F
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 61 FSQVIGSGGFSNVYLARLINDST-STNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
F Q +G GGFS V L ++D I H DR + ++E D+ +H NI++
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR--EEAQREADMHRLFNHPNILR 90
Query: 120 LIGYC----DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNR-MAIAFQLAQAIEYL 174
L+ YC + E LL + GTL ++ ++ + + + + +E +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGS 207
H + H D+K +NILL + L D GS
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGS 180
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 30/220 (13%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS----QVFKQ----ELDILLHLSHDN 116
IG G + V ++ + K+ V ++S Q + Q E+ ILL H+N
Sbjct: 31 IGEGAYGMV--------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 117 IVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
I+ + + Y+ ++ L+ ++ L + +Q+ + ++Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH- 141
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ +++H D+K SN+LL + K+ DFG A++ +M
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 237 IGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+ S GYT D++S G IL E+++ F
Sbjct: 200 LNSKGYT-----------KSIDIWSVGCILAEMLSNRPIF 228
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 119
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 120 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 165
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 166 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 133
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H ++H DIK NIL++ KL DFGS +
Sbjct: 134 FFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 179
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 180 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 133
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H ++H DIK NIL++ KL DFGS +
Sbjct: 134 FFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 179
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 180 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 119
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 120 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 165
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 166 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 134
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H ++H DIK NIL++ KL DFGS +
Sbjct: 135 FFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 180
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 181 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 146
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 147 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 192
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 193 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 147
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 148 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 193
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 194 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 161
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 162 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 207
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 208 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 134
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H ++H DIK NIL++ KL DFGS +
Sbjct: 135 FFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 180
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 181 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 119 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 164
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 165 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H L H DIK NIL++ KL DFGS +
Sbjct: 115 FFWQVLEAVRHCHNXGVL---HRDIKDENILIDLNRGELKLIDFGSGAL----------- 160
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 161 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 134
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H ++H DIK NIL++ KL DFGS +
Sbjct: 135 FFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 180
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 181 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDIL-LHLSHDNIVKLIGY 123
+G G FS + R S N A + + S R+ ++E+ L L H NIVKL
Sbjct: 19 LGEGSFS---ICRKCVHKKS-NQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 124 CDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIV 183
D+ L+ E + G L E++ S+ I +L A+ ++H+ + +V
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSHMHD---VGVV 128
Query: 184 HGDIKASNILL---EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
H D+K N+L ++L K+ DFG A++ + +P
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLK-------------------PPDNQPLKTP 169
Query: 241 GYT----DPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQLLTSLAGSMLNDI 295
+T P L D++S GVIL +++G F + L + A ++ I
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 115 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 160
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 161 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 161
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 162 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 207
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 208 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 147
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 148 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 193
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 194 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 117
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 118 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 163
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 164 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 82 RLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 135 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL-------------ARS 118
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 119 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 164
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 165 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 146
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 147 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 192
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 193 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 146
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 147 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 192
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 193 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 85 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 138 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 119
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 120 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 165
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 166 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 147
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 148 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 193
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 194 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 166
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 167 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 212
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 213 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 84 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 94
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 95 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 141
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 142 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 187
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 188 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 83 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+R +VH D+ A N+L++ + K+ DFG AK+ + + +
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL-----LGAEEKEYHAEGGKVPIKW 187
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
M + S + + + ++DV+S+GV + EL+T
Sbjct: 188 MALES--------ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 51 WDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKI---HVGSDRLSQVFKQELD 107
++DV + ++ V+G G + V IN TS A+KI G R S+VF+ E++
Sbjct: 10 FEDVYQLQED---VLGEGAHARVQTC--INLITSQEYAVKIIEKQPGHIR-SRVFR-EVE 62
Query: 108 ILLHLS-HDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQ 166
+L H N+++LI + ++ D L+FE + G++ +H ++L +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL---EASVVVQD 119
Query: 167 LAQAIEYLHERCTLHIVHGDIKASNILLEEHLN----CKLCDFGSAKMGFSSAVLXXXXX 222
+A A+++LH + I H D+K NIL EH N K+CDF +G S L
Sbjct: 120 VASALDFLHNK---GIAHRDLKPENILC-EHPNQVSPVKICDF---DLG-SGIKLNGDCS 171
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYL-----RTGMASTKTDVYSFGVILLELVTGMEAF 276
+T GS Y P + + + D++S GVIL L++G F
Sbjct: 172 PISTPELLTP----CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+R +VH D+ A N+L++ + K+ DFG AK+ + + +
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL-----LGAEEKEYHAEGGKVPIKW 185
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
M + S + + + ++DV+S+GV + EL+T
Sbjct: 186 MALES--------ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 147
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 148 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 193
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 194 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 146
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 147 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 192
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 193 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLSH- 114
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 115 -DNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 153
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 154 FFWQVLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 199
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 200 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 64 VIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV--------FKQELDILLHLS-- 113
++GSGGF +VY ++D+ AIK HV DR+S E+ +L +S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPV--AIK-HVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 114 HDNIVKLIGYCDDRDEGVL----------LFEYVPN-GTLQEKLHGTPRSSKLPWRNRMA 162
+++L+ + + D VL LF+++ G LQE+L +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------------ARS 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXX 221
+Q+ +A+ + H C ++H DIK NIL++ KL DFGS +
Sbjct: 115 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL----------- 160
Query: 222 XXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTG 272
T G+ Y+ P ++R ++ V+S G++L ++V G
Sbjct: 161 ------LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+ +G G + V+ +S A+KI D S + E+ + L HDNI+ I
Sbjct: 14 ECVGKGRYGEVWRGLWHGESV----AVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 123 Y-CDDRDEGVLLF---EYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQA-IEYLHER 177
R+ L+ Y +G+L + L L R ++ A LA +E +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMI 237
I H D K+ N+L++ +L C + D G A M + TK+ M
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG---TKRYM-- 184
Query: 238 GSPGYTDPHYLRTGMASTK-TDVYSFGVILLEL 269
+P D S K TD+++FG++L E+
Sbjct: 185 -APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 41/245 (16%)
Query: 56 RFTQN---FSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELD 107
R T N + +++G G F V L + +T A+KI V D ++ E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 60
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRSSKLPWRNRMA 162
+L + H + L D + EY G L +E++ R+ R
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA-------RFY 113
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
A ++ A++YLH ++V+ D+K N++L++ + K+ DFG K G
Sbjct: 114 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK--- 167
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
G+P Y P L D + GV++ E++ G F ++ +
Sbjct: 168 ------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
Query: 283 LLTSL 287
L L
Sbjct: 216 KLFEL 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 82 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 135 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 41/245 (16%)
Query: 56 RFTQN---FSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELD 107
R T N + +++G G F V L + +T A+KI V D ++ E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 61
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRSSKLPWRNRMA 162
+L + H + L D + EY G L +E++ R+
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR--------F 113
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ A++YLH ++V+ D+K N++L++ + K+ DFG K G
Sbjct: 114 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK--- 168
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
G+P Y P L D + GV++ E++ G F ++ +
Sbjct: 169 ------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
Query: 283 LLTSL 287
L L
Sbjct: 217 KLFEL 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 41/245 (16%)
Query: 56 RFTQN---FSQVIGSGGFSNVYLARLINDSTSTNGAIKIH-----VGSDRLSQVFKQELD 107
R T N + +++G G F V L + +T A+KI V D ++ E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 62
Query: 108 ILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTL-----QEKLHGTPRSSKLPWRNRMA 162
+L + H + L D + EY G L +E++ R+
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR--------F 114
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
++ A++YLH ++V+ D+K N++L++ + K+ DFG K G
Sbjct: 115 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK--- 169
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
G+P Y P L D + GV++ E++ G F ++ +
Sbjct: 170 ------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
Query: 283 LLTSL 287
L L
Sbjct: 218 KLFEL 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 38/231 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
NF V+G G F V L+ T A+KI V Q+ D+ + ++
Sbjct: 23 NFLMVLGKGSFGKVMLSE--RKGTDELYAVKI-----LKKDVVIQDDDVECTMVEKRVLA 75
Query: 120 LIGY---------C-DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L G C D + EYV G L + R + + + A ++A
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAI 132
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+ +L + I++ D+K N++L+ + K+ DFG K V
Sbjct: 133 GLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV------------- 176
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
TK G+P Y P + D ++FGV+L E++ G F E+
Sbjct: 177 TTK--XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 33/243 (13%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS 99
G + V K +W+ + + +GSG + +V A I+ + AIK + S
Sbjct: 9 GFYKQDVNKTAWELPKTYVSPTH--VGSGAYGSVCSA--IDKRSGEKVAIK-KLSRPFQS 63
Query: 100 QVFKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFE-YVPNGTLQEKLHGTPRSSK 154
++F + EL +L H+ H+N++ L+ ++ Y+ +Q L K
Sbjct: 64 EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI-MGLK 122
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSS 214
+ +Q+ + ++Y+H + +VH D+K N+ + E K+ DFG A+ +
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGM 273
+T V+ + Y P + + M +T D++S G I+ E++TG
Sbjct: 180 ---------------MTGYVV---TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 274 EAF 276
F
Sbjct: 222 TLF 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 40 GIDGRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLS 99
G + V K +W+ + + +GSG + +V A I+ + AIK + S
Sbjct: 27 GFYKQDVNKTAWELPKTYVSPTH--VGSGAYGSVCSA--IDKRSGEKVAIK-KLSRPFQS 81
Query: 100 QVFKQ----ELDILLHLSHDNIVKLIGYCDDRDEGVLLFE-YVPNGTLQ---EKLHGTPR 151
++F + EL +L H+ H+N++ L+ ++ Y+ +Q +K+ G
Sbjct: 82 EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEF 141
Query: 152 SSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG 211
S + + +Q+ + ++Y+H + +VH D+K N+ + E K+ DFG A+
Sbjct: 142 SEE----KIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194
Query: 212 FSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELV 270
+ +T V+ + Y P + + M +T D++S G I+ E++
Sbjct: 195 DAE---------------MTGYVV---TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 271 TGMEAF 276
TG F
Sbjct: 237 TGKTLF 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 78 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYL 130
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 131 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 115 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 167
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 168 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 37/235 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK---------QELDILLHLS 113
+IG G + VYLA + +T N AIK +++++F+ +E+ IL L
Sbjct: 32 HLIGRGSYGYVYLA--YDKNTEKNVAIK------KVNRMFEDLIDCKRILREITILNRLK 83
Query: 114 HDNIVKLIGYC--DDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
D I++L DD DE ++ E + + L+ KL TP L + I + L
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLK-KLFKTPIF--LTEEHIKTILYNLL 139
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA------VLXXXXX 222
++HE I+H D+K +N LL + + K+CDFG A+ S L
Sbjct: 140 LGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 223 XXXXXXXITKQVM-MIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEA 275
+ KQ+ + + Y P + TK+ D++S G I EL+ +++
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+ +G G + V+ + N A+KI D S + EL + L H+NI+ I
Sbjct: 14 ECVGKGRYGEVWRGSWQGE----NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 123 Y-CDDRDEGVLLF---EYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQA-IEYLHER 177
R L+ Y G+L + L T + R ++IA LA IE +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM- 236
I H D+K+ NIL++++ C + D G A M S T Q+ +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS----------------TNQLDVG 173
Query: 237 ----IGSPGYTDPHYLRTGM------ASTKTDVYSFGVILLELVTGM 273
+G+ Y P L + + + D+++FG++L E+ M
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHYVMQEHRKVP 177
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 237
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 238 EDCPQDIYNVMV 249
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 75 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 127
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 128 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+ +G G + V+ + N A+KI D S + EL + L H+NI+ I
Sbjct: 43 ECVGKGRYGEVWRGSWQGE----NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 123 Y-CDDRDEGVLLF---EYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQA-IEYLHER 177
R L+ Y G+L + L T + R ++IA LA IE +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM- 236
I H D+K+ NIL++++ C + D G A M S T Q+ +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS----------------TNQLDVG 202
Query: 237 ----IGSPGYTDPHYLRTGM------ASTKTDVYSFGVILLELVTGM 273
+G+ Y P L + + + D+++FG++L E+ M
Sbjct: 203 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 249
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 36/227 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG 122
+ +G G + V+ + N A+KI D S + EL + L H+NI+ I
Sbjct: 14 ECVGKGRYGEVWRGSWQGE----NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 123 Y-CDDRDEGVLLF---EYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQA-IEYLHER 177
R L+ Y G+L + L T + R ++IA LA IE +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 178 CTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM- 236
I H D+K+ NIL++++ C + D G A M S T Q+ +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS----------------TNQLDVG 173
Query: 237 ----IGSPGYTDPHYLRTGM------ASTKTDVYSFGVILLELVTGM 273
+G+ Y P L + + + D+++FG++L E+ M
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHXVMQEHRKVP 177
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 237
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 238 EDCPQDIYNVMV 249
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHYVMQEHRKVP 177
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 237
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 238 EDCPQDIYNVMV 249
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 91 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 143
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 144 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 166 QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXX 225
Q+ +E+LH+R +I++ D+K N+LL++ N ++ D G A
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA---------------VE 338
Query: 226 XXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
TK G+PG+ P L D ++ GV L E++ F
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 106 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 158
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 159 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 166 QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXX 225
Q+ +E+LH+R +I++ D+K N+LL++ N ++ D G A
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA---------------VE 338
Query: 226 XXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
TK G+PG+ P L D ++ GV L E++ F
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 53 DVERFTQNF--SQVIGSGGFSNVYLARLINDSTSTNGAIKI-----HVGSDRLSQVFKQE 105
D E F + ++G GGF V+ + D AIK+ +G LS
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQV--AIKVIPRNRVLGWSPLSDSVTCP 82
Query: 106 LDILLHL------SHDNIVKLIGYCDDRDEGVLLFEY-VPNGTLQEKLHGTPRSSKLPWR 158
L++ L H +++L+ + + ++ +L+ E +P L + + + K P
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-----TEKGPLG 137
Query: 159 NRMAIAF--QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNC-KLCDFGSAKMGFSSA 215
+ F Q+ AI++ H R +VH DIK NIL++ C KL DFGS +
Sbjct: 138 EGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP 194
Query: 216 VLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTG 272
G+ Y+ P ++ R + V+S G++L ++V G
Sbjct: 195 YTD-----------------FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHYVMQEHRKVP 181
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 241
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 242 EDCPQDIYNVMV 253
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 166 QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXX 225
Q+ +E+LH+R +I++ D+K N+LL++ N ++ D G A
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA---------------VE 338
Query: 226 XXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
TK G+PG+ P L D ++ GV L E++ F
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHYVMQEHRKVP 187
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 247
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 248 EDCPQDIYNVMV 259
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 29/195 (14%)
Query: 89 IKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYCDD--RDEGVLLFEYVPNGTLQEKL 146
+K+ S R S+ F +E L SH N++ ++G C L+ ++P G+L L
Sbjct: 41 LKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL 100
Query: 147 H-GTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDF 205
H GT + + + A +A+ + +LH L H + + +++++E + ++
Sbjct: 101 HEGT--NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMTARIS-M 156
Query: 206 GSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTK---TDVYSF 262
K F S + +P + P L+ T D++SF
Sbjct: 157 ADVKFSFQSP-------------------GRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 263 GVILLELVTGMEAFC 277
V+L ELVT F
Sbjct: 198 AVLLWELVTREVPFA 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
IA + +A+E+LH + L ++H D+K SN+L+ K CDFG +
Sbjct: 141 IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA------ 192
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLEL 269
I +P +P + G S K+D++S G+ +EL
Sbjct: 193 -----KDIDAGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIEL 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHXVMQEHRKVP 187
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 247
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 248 EDCPQDIYNVMV 259
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 87 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 139
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
+R +VH D+ A N+L++ + K+ DFG AK+ + + +
Sbjct: 140 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL-----LGAEEKEYHAEGGKVPIKW 191
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
M + S + + + ++DV+S+GV + EL+T
Sbjct: 192 MALES--------ILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-----FKQELDILLHLSHDNIVK 119
+G G F V S T + D LSQ F +E++ + L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L G ++ E P G+L ++L L +R A+ Q+A+ + YL +
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+H D+ A N+LL K+ DFG + Q
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMR------------ALPQNDDHYVMQEHRKVP 181
Query: 240 PGYTDPHYLRTGMASTKTDVYSFGVILLELVT-GMEAFCPENG-QLLTSL--AGSMLNDI 295
+ P L+T S +D + FGV L E+ T G E + NG Q+L + G L
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 241
Query: 296 ADCEATKVNELV 307
DC N +V
Sbjct: 242 EDCPQDIYNVMV 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 86/227 (37%), Gaps = 38/227 (16%)
Query: 60 NFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVK 119
NF V+G G F V L+ T A+KI V Q+ D+ + ++
Sbjct: 344 NFLMVLGKGSFGKVMLSE--RKGTDELYAVKI-----LKKDVVIQDDDVECTMVEKRVLA 396
Query: 120 LIGY---------C-DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
L G C D + EYV G L + R + + + A ++A
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAI 453
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXX 229
+ +L + I++ D+K N++L+ + K+ DFG K V
Sbjct: 454 GLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV------------- 497
Query: 230 ITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
TK G+P Y P + D ++FGV+L E++ G F
Sbjct: 498 TTK--XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 166 QLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXX 225
Q+ +E+LH+R +I++ D+K N+LL++ N ++ D G A
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA---------------VE 338
Query: 226 XXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
TK G+PG+ P L D ++ GV L E++ F
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+GSG F VY I + + I S + ++ E ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 83 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 27/222 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDR--LSQVFKQELDILLHLSHDNIVK 119
+ IG G + V+ A+ N T A+K + + D + +E+ +L L H NIV+
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L + L+FE+ + L++ + L + FQL + + + H R
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+++H D+K N+L+ + KL DFG A+ F V + +V+ +
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPV-----------RCYSAEVVTL-- 165
Query: 240 PGYTDPHYL-RTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
Y P L + ST D++S G I EL P N
Sbjct: 166 -WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGN 206
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 26/223 (11%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIG-Y 123
+G G + +VY A+ + + A+K G+ +S +E+ +L L H N++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVF 87
Query: 124 CDDRDEGV-LLFEYVPNGTLQE-KLHGTPRSSK----LPWRNRMAIAFQLAQAIEYLHER 177
D V LLF+Y + K H +++K LP ++ +Q+ I YLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 178 CTLHIVHGDIKASNILL----EEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
L H D+K +NIL+ E K+ D G A++ S
Sbjct: 148 WVL---HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 234 VMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+++G+ YT D+++ G I EL+T F
Sbjct: 205 ELLLGARHYT-----------KAIDIWAIGCIFAELLTSEPIF 236
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 56 RFTQNFSQV--IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQ--------- 104
++Q +S + +GSG F V+ A ++ + +K L + +
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTA--VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 105 ELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIA 164
E+ IL + H NI+K++ +++ L+ E +G+ + R +L I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 165 FQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
QL A+ YL + I+H DIK NI++ E KL DFGSA
Sbjct: 137 RQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFG-SAKMGFSSAVLXXXXXXXXXXX 228
A+ +LH + +H+ D+K +NI L CKL DFG ++G + A
Sbjct: 169 ALAHLHSQGLVHL---DVKPANIFLGPRGRCKLGDFGLLVELGTAGA------------- 212
Query: 229 XITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
+ G P Y P L+ G T DV+S G+ +LE+ ME P G+
Sbjct: 213 ----GEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVACNME--LPHGGE 259
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 48 KYSWDDVERFTQNFS--QVIGSGGFSNVYLARLIN-DSTSTNGAIKIHVGSDRLS----Q 100
K +DV Q F+ +++G G F +V A+L D + A+K+ + +D ++ +
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKM-LKADIIASSDIE 70
Query: 101 VFKQELDILLHLSHDNIVKLIGYC-DDRDEG-----VLLFEYVPNGTLQEKLHGT---PR 151
F +E + H ++ KL+G R +G +++ ++ +G L L +
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 152 SSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMG 211
LP + + +A +EYL R + +H D+ A N +L E + + DFG ++
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
Query: 212 FSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVT 271
+S + + L + + +DV++FGV + E++T
Sbjct: 188 YSGDYYRQGCASKLPVKWLALES-------------LADNLYTVHSDVWAFGVTMWEIMT 234
Query: 272 -GMEAFCP-ENGQLLTSL-AGSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAA 328
G + EN ++ L G+ L +C + E+ D +
Sbjct: 235 RGQTPYAGIENAEIYNYLIGGNRLKQPPEC----MEEVYD-----------------LMY 273
Query: 329 LCLRQSPILRPSATQILHTIKHQISSISFLFSPQKDP 365
C P RPS T + +++ + +S L S +DP
Sbjct: 274 QCWSADPKQRPSFTCLRMELENILGHLSVL-STSQDP 309
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 17 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 75 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 128
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 129 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKD-SQVGTV 173
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 174 NYMPPEAIK-DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 220
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I+ K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 221 QQIINQIS-----KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 20 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 77
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 78 YDY-EITDQYIYMVMECGNIDLNSWLKK--KKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 131
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 132 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKD-SQVGTV 176
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 177 NYMPPEAIK-DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 223
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 224 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 36 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 94 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 147
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 148 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKDSQ-VGTV 192
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 193 NYMPPEAIK-DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 239
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I+ K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 240 QQIINQIS-----KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 64 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 122 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKDSQ-VGTV 220
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 221 NYMPPEAIK-DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 267
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 268 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 16 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 73
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 74 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 127
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 128 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKD-SQVGTV 172
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 173 NYMPPEAIKD-MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 219
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 220 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 118/297 (39%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 36 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 94 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 147
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A +G+
Sbjct: 148 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDS-------------QVGTV 192
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 193 NYMPPEAIK-DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 239
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 240 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 94/260 (36%), Gaps = 65/260 (25%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQV-------FKQELDILLHLSHDNI 117
IG G + V +A I + T AIKI + +++ Q+ K E+ ++ L H NI
Sbjct: 34 IGQGSYGVVRVA--IENQTRAIRAIKI-MNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 118 VKLIGYCDDRDEGVLLFEYVPNGTLQEKL------------------------------- 146
+L +D L+ E G L +KL
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 147 ----HGTPRSSKLPWRNRM--AIAFQLAQAIEYLHERCTLHIVHGDIKASNILL--EEHL 198
HG S R ++ I Q+ A+ YLH + I H DIK N L +
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSF 207
Query: 199 NCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMAS--TK 256
KL DFG +K + TK G+P + P L T S K
Sbjct: 208 EIKLVDFGLSKEFYK-------LNNGEYYGMTTKA----GTPYFVAPEVLNTTNESYGPK 256
Query: 257 TDVYSFGVILLELVTGMEAF 276
D +S GV+L L+ G F
Sbjct: 257 CDAWSAGVLLHLLLMGAVPF 276
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 64 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 122 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKDSQ-VGTV 220
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 221 NYMPPEAIKD-MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 267
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 268 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 102 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 156
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 57/297 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGA--IKIHVGSDRLSQVFKQELDILLHLSH--DNIVKL 120
IGSGG S V+ +++N+ + + ++ ++ E+ L L D I++L
Sbjct: 64 IGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 121 IGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTL 180
Y + D+ + + N L L + S PW R + + +A+ +H+
Sbjct: 122 YDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 181 HIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSP 240
IVH D+K +N L+ + + KL DFG A + K +G+
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQ------------MQPDTTSVVKDSQ-VGAV 220
Query: 241 GYTDPHYLRTGMASTK------------TDVYSFGVILLELVTGMEAFCPENGQLLTSLA 288
Y P ++ M+S++ +DV+S G IL + G F
Sbjct: 221 NYMPPEAIKD-MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------------ 267
Query: 289 GSMLNDIADCEATKVNELVDPRLAGDFDLDEARAMLSIAALCLRQSPILRPSATQIL 345
++N I +K++ ++DP +F + + + CL++ P R S ++L
Sbjct: 268 QQIINQI-----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 37/265 (13%)
Query: 53 DVERFTQNFSQV---------IGSGGFSNVYLARL-INDSTSTNGAIKIHVGSDRLSQVF 102
D+E+ + Q+ IG G FS+VYLA + A+K + + ++
Sbjct: 8 DIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIA 67
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLL-FEYVPNGTLQEKLHGTPRSSKLPWRNRM 161
+ + + DN++ + YC +++ V++ Y+ + + + L+ L ++
Sbjct: 68 AELQCLTVAGGQDNVMG-VKYCFRKNDHVVIAMPYLEHESFLDILNS------LSFQEVR 120
Query: 162 AIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHL-NCKLCDFGSAKMGFSSAV-LXX 219
L +A++ +H+ IVH D+K SN L L L DFG A+ + + L
Sbjct: 121 EYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 220 XXXXXXXXXXITKQVMMI------------GSPGYTDPHYL-RTGMASTKTDVYSFGVIL 266
++ I G+PG+ P L + +T D++S GVI
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 267 LELVTGMEAFCPENGQLLTSLAGSM 291
L L++G F + LT+LA M
Sbjct: 238 LSLLSGRYPFYKASDD-LTALAQIM 261
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+ SG F VY I + + I S + ++ E ++ + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 88 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 25/234 (10%)
Query: 48 KYSWDDVERFTQN-FSQ--VIGSGGFSNVYLA--RLINDSTSTNGAIKIHVGSDRLSQVF 102
++ W + + T+N F Q V+G GGF V R + K + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
E IL ++ +V L + +D L+ + G L+ ++ ++ P +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
A ++ +E LH IV+ D+K NILL++H + ++ D G A +
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR-- 345
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+G+ GY P ++ + D ++ G +L E++ G F
Sbjct: 346 --------------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 30/202 (14%)
Query: 82 STSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGT 141
+ S N I I D FK EL I+ + ++ + G + DE +++EY+ N +
Sbjct: 74 TKSNNDKISIKSKYDD----FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 142 L---QEKLHGTPRSSK--LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEE 196
+ E ++ +P + I + + Y+H +I H D+K SNIL+++
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDK 187
Query: 197 HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYL--RTGMAS 254
+ KL DFG ++ + G+ + P + +
Sbjct: 188 NGRVKLSDFGESEYMVDKKIKGSR-----------------GTYEFMPPEFFSNESSYNG 230
Query: 255 TKTDVYSFGVILLELVTGMEAF 276
K D++S G+ L + + F
Sbjct: 231 AKVDIWSLGICLYVMFYNVVPF 252
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 65 IGSGGFSNVYLA-RLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGY 123
+G G + VY A + + T I++ + + +E+ +L L H NI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 124 CDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIV 183
L+FEY N L++ + P S R + +QL + + H R L
Sbjct: 102 IHHNHRLHLIFEYAEND-LKKYMDKNPDVSM---RVIKSFLYQLINGVNFCHSRRCL--- 154
Query: 184 HGDIKASNILL-----EEHLNCKLCDFGSAK 209
H D+K N+LL E K+ DFG A+
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 161 MAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXX 220
+ I Q+A+A+E+LH + ++H D+K SNI K+ DFG
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 221 XXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELV 270
QV G+ Y P + S K D++S G+IL EL+
Sbjct: 224 LTPMPAYATHXGQV---GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 89 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 143
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 25/234 (10%)
Query: 48 KYSWDDVERFTQN-FSQ--VIGSGGFSNVYLA--RLINDSTSTNGAIKIHVGSDRLSQVF 102
++ W + + T+N F Q V+G GGF V R + K + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 103 KQELDILLHLSHDNIVKLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMA 162
E IL ++ +V L + +D L+ + G L+ ++ ++ P +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXX 222
A ++ +E LH IV+ D+K NILL++H + ++ D G A +
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR-- 345
Query: 223 XXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
+G+ GY P ++ + D ++ G +L E++ G F
Sbjct: 346 --------------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 68
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 69 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 123
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 65
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 66 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 120
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 63 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 117
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 61 FSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDNIVKL 120
+ IG G F V+ + + A+KI + S + E+ + L H+NI+
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEV----AVKIFSSREERSWFREAEIYQTVMLRHENILGF 63
Query: 121 IGYCDDRDEGV-----LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLH 175
I D++D G L+ +Y +G+L + L+ + + + +A A + +LH
Sbjct: 64 IA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 118
Query: 176 -----ERCTLHIVHGDIKASNILLEEHLNCKLCDFGSA 208
+ I H D+K+ NIL++++ C + D G A
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 33/218 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL---SHDNIVK 119
+VIG G F V + + + A+K+ R + +E+ IL HL DN +
Sbjct: 103 KVIGKGSFGQV--VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 120 LIGYCDD---RDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+I ++ R+ + FE + + + LP + A + Q ++ LH+
Sbjct: 161 VIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALHK 218
Query: 177 RCTLHIVHGDIKASNILLEEH--LNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
I+H D+K NILL++ K+ DFGS+ +
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSS------------------CYEHQRVY 257
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
I S Y P + D++S G IL EL+TG
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+ SG F VY I + + I S + ++ E ++ + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 29/161 (18%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK---------QELDILLHLS 113
+IG G + VYLA + + + N AIK +++++F+ +E+ IL L
Sbjct: 34 HLIGRGSYGYVYLA--YDKNANKNVAIK------KVNRMFEDLIDCKRILREITILNRLK 85
Query: 114 HDNIVKL--IGYCDDR---DEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLA 168
D I++L + +D DE ++ E + + L+ KL TP L ++ I + L
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLK-KLFKTPIF--LTEQHVKTILYNLL 141
Query: 169 QAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+++HE I+H D+K +N LL + + K+CDFG A+
Sbjct: 142 LGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 33/218 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL---SHDNIVK 119
+VIG G F V + + + A+K+ R + +E+ IL HL DN +
Sbjct: 103 KVIGKGSFGQV--VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 120 LIGYCDD---RDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+I ++ R+ + FE + + + LP + A + Q ++ LH+
Sbjct: 161 VIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALHK 218
Query: 177 RCTLHIVHGDIKASNILLEEH--LNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
I+H D+K NILL++ K+ DFGS+ +
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSS------------------CYEHQRVY 257
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
I S Y P + D++S G IL EL+TG
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKI----HVGSDRLSQVFKQELDILLHLSHDNIV 118
+V+ SG F VY I + + I S + ++ E ++ + + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTL----QEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
+L+G C L+ + +P G L +E L W Q+A+ + YL
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 175 HERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKM 210
+R +VH D+ A N+L++ + K+ DFG AK+
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 23/131 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + AI++LH +I H D+K N+L E+ KL DFG AK +
Sbjct: 109 REAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 165
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
A+ +P Y P L D++S GVI+ L+ G
Sbjct: 166 ALQTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 208
Query: 275 AFCPENGQLLT 285
F GQ ++
Sbjct: 209 PFYSNTGQAIS 219
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 33/218 (15%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHL---SHDNIVK 119
+VIG G F V + + + A+K+ R + +E+ IL HL DN +
Sbjct: 103 KVIGKGXFGQV--VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 120 LIGYCDD---RDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHE 176
+I ++ R+ + FE + + + LP + A + Q ++ LH+
Sbjct: 161 VIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALHK 218
Query: 177 RCTLHIVHGDIKASNILLEEH--LNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQV 234
I+H D+K NILL++ K+ DFGS+ +
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSS------------------CYEHQRVY 257
Query: 235 MMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
I S Y P + D++S G IL EL+TG
Sbjct: 258 XXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 23/131 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + AI++LH +I H D+K N+L E+ KL DFG AK +
Sbjct: 128 REAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
A+ +P Y P L D++S GVI+ L+ G
Sbjct: 185 ALQTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227
Query: 275 AFCPENGQLLT 285
F GQ ++
Sbjct: 228 PFYSNTGQAIS 238
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 161 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 218 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 261
Query: 275 AFCPENG 281
F +G
Sbjct: 262 PFYSNHG 268
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 117 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 174 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 217
Query: 275 AFCPENG 281
F +G
Sbjct: 218 PFYSNHG 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 27/222 (12%)
Query: 63 QVIGSGGFSNVYLARLINDSTSTNGAIK-IHVGSDR--LSQVFKQELDILLHLSHDNIVK 119
+ IG G + V+ A+ N T A+K + + D + +E+ +L L H NIV+
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 120 LIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
L + L+FE+ + L++ + L + FQL + + + H R
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 180 LHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGS 239
+++H D+K N+L+ + KL +FG A+ F V + +V+ +
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPV-----------RCYSAEVVTL-- 165
Query: 240 PGYTDPHYL-RTGMASTKTDVYSFGVILLELVTGMEAFCPEN 280
Y P L + ST D++S G I EL P N
Sbjct: 166 -WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 121 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 177
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 178 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 221
Query: 275 AFCPENG 281
F +G
Sbjct: 222 PFYSNHG 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 123 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 179
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 180 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 223
Query: 275 AFCPENG 281
F +G
Sbjct: 224 PFYSNHG 230
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 117 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 174 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 217
Query: 275 AFCPENG 281
F +G
Sbjct: 218 PFYSNHG 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 122 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 178
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 179 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 222
Query: 275 AFCPENG 281
F +G
Sbjct: 223 PFYSNHG 229
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 167 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 223
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 224 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 267
Query: 275 AFCPENG 281
F +G
Sbjct: 268 PFYSNHG 274
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 115 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 172 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 215
Query: 275 AFCPENG 281
F +G
Sbjct: 216 PFYSNHG 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 116 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 172
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 173 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 216
Query: 275 AFCPENG 281
F +G
Sbjct: 217 PFYSNHG 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 115 REASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D++S GVI+ L+ G
Sbjct: 172 NSLTEPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 215
Query: 275 AFCPENG 281
F +G
Sbjct: 216 PFYSNHG 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 41/249 (16%)
Query: 43 GRSVKKYSWDDVERFTQNFSQVIGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVF 102
G +KK + D + T SQV+G G N + ++ N T A+K+ L
Sbjct: 21 GLQIKKNAIIDDYKVT---SQVLGLG--INGKVLQIFNKRTQEKFALKM------LQDCP 69
Query: 103 KQELDILLHLSHD---NIVKLIGYCDDRDEG----VLLFEYVPNGTLQEKLHGTPRSSKL 155
K ++ LH +IV+++ ++ G +++ E + G L ++ +
Sbjct: 70 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-F 128
Query: 156 PWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGF 212
R I + +AI+YLH +++I H D+K N+L + KL DFG AK
Sbjct: 129 TEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 213 SSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
S L +P Y P L D++S GVI+ L+ G
Sbjct: 186 SHNSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
Query: 273 MEAFCPENG 281
F +G
Sbjct: 230 YPPFYSNHG 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 38/200 (19%)
Query: 91 IHVGSDRLSQVFK---------QELDILLHLSHDNIVKLIGYCDDRD-----EGVLLFEY 136
I+V +LS+ F+ +EL +L ++H NI+ L+ + + V L
Sbjct: 50 INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 137 VPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEE 196
+ + L + +H ++ + + +Q+ I++LH + I+H D+K SNI+++
Sbjct: 110 LMDANLCQVIHMELDHERMSY-----LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 197 HLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTK 256
K+ DFG A+ ++ ++ + + Y P + +
Sbjct: 162 DCTLKILDFGLARTACTNFMMTP----------------YVVTRYYRAPEVILGMGYAAN 205
Query: 257 TDVYSFGVILLELVTGMEAF 276
D++S G I+ ELV G F
Sbjct: 206 VDIWSVGCIMGELVKGCVIF 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 158 RNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL---EEHLNCKLCDFGSAKMGFSS 214
R I + +AI+YLH +++I H D+K N+L + KL DFG AK S
Sbjct: 161 REASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 215 AVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGME 274
L +P Y P L D +S GVI L+ G
Sbjct: 218 NSLTTPCY----------------TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYP 261
Query: 275 AFCPENG 281
F +G
Sbjct: 262 PFYSNHG 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+T+ Y P + D++S GVI+ E++ G
Sbjct: 183 -------TPYVVTRY--------YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+T+ Y P + D++S GVI+ E++ G
Sbjct: 183 -------TPYVVTRY--------YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 38/205 (18%)
Query: 86 NGAIKIHVGSDRLSQVFK---------QELDILLHLSHDNIVKLIGYCDDRD-----EGV 131
+ + I+V +LS+ F+ +EL +L ++H NI+ L+ + + V
Sbjct: 43 DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDV 102
Query: 132 LLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASN 191
L + + L + +H ++ + + +Q+ I++LH + I+H D+K SN
Sbjct: 103 YLVMELMDANLCQVIHMELDHERMSY-----LLYQMLCGIKHLH---SAGIIHRDLKPSN 154
Query: 192 ILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTG 251
I+++ K+ DFG A+ ++ ++ + + Y P +
Sbjct: 155 IVVKSDCTLKILDFGLARTASTNFMMTP----------------YVVTRYYRAPEVILGM 198
Query: 252 MASTKTDVYSFGVILLELVTGMEAF 276
D++S G I+ ELV G F
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 129 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 184
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
V + + Y P + D++S G I+ E++ G
Sbjct: 185 ---------------VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK----QELDILLHLSHDNIVKL 120
IG G F V+ AR + T A+K V + + F +E+ IL L H+N+V L
Sbjct: 25 IGQGTFGEVFKAR--HRKTGQKVALK-KVLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 121 IGYCD------DRDEG--VLLFEYVPN---GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
I C +R +G L+F++ + G L L K + L
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 135
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ Y+H I+H D+KA+N+L+ KL DFG A+ FS A
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLA 177
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK----QELDILLHLSHDNIVKL 120
IG G F V+ AR + T A+K V + + F +E+ IL L H+N+V L
Sbjct: 26 IGQGTFGEVFKAR--HRKTGQKVALK-KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 121 IGYCD------DRDEG--VLLFEYVPN---GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
I C +R +G L+F++ + G L L K + L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ Y+H I+H D+KA+N+L+ KL DFG A+ FS A
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLA 178
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 31/196 (15%)
Query: 89 IKIHVGSDRLSQVFKQELDILLHLSHDNIVKLIGYCDDR--DEGVLLFEYVPNGTLQEKL 146
+K+ S R S+ F +E L SH N++ ++G C L+ + P G+L L
Sbjct: 41 LKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL 100
Query: 147 HGTPRSSKLPWRNRMAIAFQL--AQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCD 204
H + A+ F L A+ +LH L H + + ++ ++E ++
Sbjct: 101 H---EGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSRSVXIDEDXTARISX 156
Query: 205 FGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTK---TDVYS 261
K F S +P + P L+ T D +S
Sbjct: 157 -ADVKFSFQSP-------------------GRXYAPAWVAPEALQKKPEDTNRRSADXWS 196
Query: 262 FGVILLELVTGMEAFC 277
F V+L ELVT F
Sbjct: 197 FAVLLWELVTREVPFA 212
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 31/157 (19%)
Query: 155 LPWRNRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILL------EEHLNCKLCDF--- 205
LP R +I Q+ Q ++YLH +C I+H DIK NIL+ + + ++
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCK--IIHTDIKPENILMCVDDAYVRRMAAEATEWQKA 194
Query: 206 ------GSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHY------------ 247
GSA +A L I ++ +G+ + H+
Sbjct: 195 GAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSI 254
Query: 248 --LRTGMASTKTDVYSFGVILLELVTGMEAFCPENGQ 282
L ST D++S + EL TG F P +G+
Sbjct: 255 EVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGE 291
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK----QELDILLHLSHDNIVKL 120
IG G F V+ AR + T A+K V + + F +E+ IL L H+N+V L
Sbjct: 26 IGQGTFGEVFKAR--HRKTGQKVALK-KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 121 IGYCD------DRDEG--VLLFEYVPN---GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
I C +R +G L+F++ + G L L K + L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ Y+H I+H D+KA+N+L+ KL DFG A+ FS A
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLA 178
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 40/133 (30%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---------EEHLNC----------KLC 203
+A+QL A+ +LHE + H D+K NIL EH +C ++
Sbjct: 128 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 204 DFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
DFGSA ++ + Y P + + DV+S G
Sbjct: 185 DFGSATFDHEH------------------HTTIVATRHYRPPEVILELGWAQPCDVWSIG 226
Query: 264 VILLELVTGMEAF 276
IL E G F
Sbjct: 227 CILFEYYRGFTLF 239
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 40/133 (30%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---------EEHLNC----------KLC 203
+A+QL A+ +LHE + H D+K NIL EH +C ++
Sbjct: 137 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 204 DFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
DFGSA ++ + Y P + + DV+S G
Sbjct: 194 DFGSATFDHEH------------------HTTIVATRHYRPPEVILELGWAQPCDVWSIG 235
Query: 264 VILLELVTGMEAF 276
IL E G F
Sbjct: 236 CILFEYYRGFTLF 248
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 53/239 (22%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDN------IV 118
+G G F V + + + + + A+KI DR + + E+ +L HL+ + V
Sbjct: 22 LGEGAFGKV-VECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR--NRMAIAFQLAQAIEYLHE 176
+++ + + ++FE + T + LP+R + +A+Q+ +++ +LH
Sbjct: 81 QMLEWFEHHGHICIVFELLGLSTYD----FIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 177 RCTLHIVHGDIKASNILLEE-------------------HLNCKLCDFGSAKMGFSSAVL 217
+ H D+K NIL + + + K+ DFGSA
Sbjct: 137 N---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--- 190
Query: 218 XXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTGMEAF 276
++ + Y P + S DV+S G IL+E G F
Sbjct: 191 ---------------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 104 QELDILLHLSHDNIVKLIGYC-----DDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR 158
+E+ IL L+HD++VK++ + DE ++ E + +KL TP L
Sbjct: 101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDF--KKLFRTP--VYLTEL 156
Query: 159 NRMAIAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAK 209
+ + + L ++Y+H + I+H D+K +N L+ + + K+CDFG A+
Sbjct: 157 HIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 40/133 (30%)
Query: 163 IAFQLAQAIEYLHERCTLHIVHGDIKASNILL---------EEHLNC----------KLC 203
+A+QL A+ +LHE + H D+K NIL EH +C ++
Sbjct: 160 MAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 204 DFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFG 263
DFGSA ++ + Y P + + DV+S G
Sbjct: 217 DFGSATFDHEH------------------HTTIVATRHYRPPEVILELGWAQPCDVWSIG 258
Query: 264 VILLELVTGMEAF 276
IL E G F
Sbjct: 259 CILFEYYRGFTLF 271
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
T +V+ + Y P + D++S G I+ E++ G
Sbjct: 183 ------------TPEVV---TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK-QELDILLHLSHDNIVKLI-- 121
+G GG V+ A +++ AIK V +D S +E+ I+ L HDNIVK+
Sbjct: 19 LGCGGNGLVFSA--VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 122 ----GYCDDRDEGVLL---FEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYL 174
G D G L Y+ ++ L L + +QL + ++Y+
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 175 HERCTLHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQ 233
H + +++H D+K +N+ + E L K+ DFG A++ +TK
Sbjct: 137 H---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPH----YSHKGHLSEGLVTKW 189
Query: 234 VMMIGSPGYTDPHYLRTGMASTKT-DVYSFGVILLELVTGMEAFC 277
Y P L + TK D+++ G I E++TG F
Sbjct: 190 --------YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 42/257 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKI--HVGSDRLSQVFKQELDILLHL-SHDNIVKLI 121
+G G +S V+ A IN + + +KI V +++ K+E+ IL +L NI+ L
Sbjct: 45 LGRGKYSEVFEA--INITNNEKVVVKILKPVKKNKI----KREIKILENLRGGPNIITLA 98
Query: 122 GYCDD--RDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWRNRMAIAFQLAQAIEYLHERCT 179
D L+FE+V N T ++L+ T + + +++ +A++Y H +
Sbjct: 99 DIVKDPVSRTPALVFEHV-NNTDFKQLYQTLTDYDIRF-----YMYEILKALDYCH---S 149
Query: 180 LHIVHGDIKASNILLE-EHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMMIG 238
+ I+H D+K N++++ EH +L D+G A+ + + +
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVA 193
Query: 239 SPGYTDPHYL-RTGMASTKTDVYSFGVILLELVTGMEAFC--PENGQLLTSLAGSM-LND 294
S + P L M D++S G +L ++ E F +N L +A + D
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 295 IADCEATKVNELVDPRL 311
+ D K N +DPR
Sbjct: 254 LYDY-IDKYNIELDPRF 269
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 90/235 (38%), Gaps = 45/235 (19%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFKQELDILLHLSHDN------IV 118
+G G F V + + + + + A+KI DR + + E+ +L HL+ + V
Sbjct: 22 LGEGAFGKV-VECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 119 KLIGYCDDRDEGVLLFEYVPNGTLQEKLHGTPRSSKLPWR--NRMAIAFQLAQAIEYLHE 176
+++ + + ++FE + T + LP+R + +A+Q+ +++ +LH
Sbjct: 81 QMLEWFEHHGHICIVFELLGLSTYD----FIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 177 RCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLXXXXXXXXXXXXITKQVMM 236
+ H D+K NIL + ++ A +V+
Sbjct: 137 N---KLTHTDLKPENILF-------------VQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 237 IGSPGYTDPHY---------------LRTGMASTKTDVYSFGVILLELVTGMEAF 276
GS Y D H+ L G S DV+S G IL+E G F
Sbjct: 181 FGSATYDDEHHSTLVXXRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVF 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 28/166 (16%)
Query: 65 IGSGGFSNVYLARLINDSTSTNGAIKIHVGSDRLSQVFK----QELDILLHLSHDNIVKL 120
IG G F V+ AR + T A+K V + + F +E+ IL L H+N+V L
Sbjct: 26 IGQGTFGEVFKAR--HRKTGQKVALK-KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 121 IGYCDDRDEGV--------LLFEYVPN---GTLQEKLHGTPRSSKLPWRNRMAIAFQLAQ 169
I C + L+F++ + G L L K + L
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN 136
Query: 170 AIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSA 215
+ Y+H I+H D+KA+N+L+ KL DFG A+ FS A
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLA 178
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+T+ Y P + D++S G I+ E++ G
Sbjct: 183 -------TPYVVTRY--------YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 183
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+ + Y P + D++S G I+ E++ G
Sbjct: 184 P----------------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 160 RMA-IAFQLAQAIEYLHERCTLHIVHGDIKASNILLEEHLNCKLCDFGSAKMGFSSAVLX 218
RM+ + +Q+ I++LH + I+H D+K SNI+++ K+ DFG A+ +S ++
Sbjct: 128 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 183
Query: 219 XXXXXXXXXXXITKQVMMIGSPGYTDPHYLRTGMASTKTDVYSFGVILLELVTG 272
+T+ Y P + D++S G I+ E++ G
Sbjct: 184 -------TPYVVTRY--------YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,424,394
Number of Sequences: 62578
Number of extensions: 350680
Number of successful extensions: 3440
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 1495
length of query: 368
length of database: 14,973,337
effective HSP length: 100
effective length of query: 268
effective length of database: 8,715,537
effective search space: 2335763916
effective search space used: 2335763916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)