Query 017628
Match_columns 368
No_of_seqs 144 out of 174
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 17:30:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 92.5 0.34 1.2E-05 41.9 7.5 124 183-319 87-215 (255)
2 2ffu_A Ppgalnact-2, polypeptid 89.1 2.4 8.1E-05 41.5 10.7 209 108-321 65-293 (501)
3 2d7i_A Polypeptide N-acetylgal 88.2 2.8 9.5E-05 42.3 10.8 210 108-322 111-342 (570)
4 1xhb_A Polypeptide N-acetylgal 87.7 1.1 3.7E-05 43.3 7.2 139 182-322 112-262 (472)
5 2z86_A Chondroitin synthase; G 84.7 1 3.4E-05 45.1 5.4 210 108-322 92-334 (625)
6 2z86_A Chondroitin synthase; G 74.3 21 0.00071 35.6 11.0 99 108-211 374-481 (625)
7 3f1y_A Mannosyl-3-phosphoglyce 66.4 8.1 0.00028 37.6 5.8 193 108-319 93-310 (387)
8 3bcv_A Putative glycosyltransf 64.2 4.7 0.00016 34.2 3.3 108 108-220 4-120 (240)
9 4fix_A UDP-galactofuranosyl tr 60.6 8.3 0.00029 40.2 5.0 132 184-318 268-417 (657)
10 1omz_A Alpha-1,4-N-acetylhexos 53.1 24 0.00081 33.9 6.4 103 108-212 27-134 (293)
11 2bo4_A Mannosylglycerate synth 42.9 18 0.00061 35.6 3.9 183 111-311 2-210 (397)
12 2ls4_A High affinity copper up 39.8 8.8 0.0003 24.7 0.0 15 8-22 5-19 (26)
13 3l7i_A Teichoic acid biosynthe 28.6 12 0.00041 38.6 0.0 34 183-216 82-115 (729)
14 2nxv_A ATP synthase subunits r 28.1 46 0.0016 29.3 3.8 29 183-211 73-101 (249)
15 2c0n_A A197; thermophil protei 25.6 23 0.0008 32.6 1.4 31 183-217 52-85 (203)
16 3sd4_A PHD finger protein 20; 24.5 43 0.0015 25.0 2.4 14 138-151 42-55 (69)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.52 E-value=0.34 Score=41.88 Aligned_cols=124 Identities=10% Similarity=-0.075 Sum_probs=66.7
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCceeeeeeccCCCCCCCCCCCCccc
Q 017628 183 AAYEYIFIWDEDLGVEHFNGDKYMELVKKH-GLDISQPGLEPNNGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAA 261 (368)
Q Consensus 183 ~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcT~ 261 (368)
+..|||++.|+|..++.-.++++++.++++ +..+..+....- .....+..+..........- . ....
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~----~~~~ 154 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY-------HLNENRDIVKETVRPAAQVT-W----NAPC 154 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE-------EEC---CEEEEEEECCCSCB-S----CCTT
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE-------EeCCCCcchhhccCchHHHH-H----hhcC
Confidence 578999999999999988899999999876 666655543210 00000111111000000000 0 0011
Q ss_pred eEEeecccccHHHHHHhh-hh--h-cCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEecc
Q 017628 262 FVEIMAPVFSREAWRCVW-HM--I-QNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQV 319 (368)
Q Consensus 262 FVEiMAPVFSR~Awrcvw-~m--i-qnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~g 319 (368)
++-..+-+|+|++++.+- .+ + ..+.....+-|+.+...+... .++..++...+.|+.
T Consensus 155 ~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 155 AIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYI 215 (255)
T ss_dssp TSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEE
T ss_pred CCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEE
Confidence 222234478999998774 32 0 112222345576554444323 369999998888864
No 2
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.06 E-value=2.4 Score=41.54 Aligned_cols=209 Identities=11% Similarity=0.053 Sum_probs=100.7
Q ss_pred CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEeCCCCCcc-c-cccccCcceEEEEeccccccccccccCc
Q 017628 108 KPKYLLTITVGLNQKKN----IDRMVKKFSED--FQIMLFHYDGQTSQW-D-EFEWSKSAIHVSIRRQTKWWYAKRFLHP 179 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~----Vd~~v~kf~~~--F~v~LfhYDG~~~~w-~-d~~ws~~aihv~~~kqtKWw~akRfLHP 179 (368)
.|+.-|.+++=-..... ++.+++.-..+ +.|++ .=||+.++= . .++-.. -++|...... --++.....-
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIv-VDDgS~D~t~~~~~~~~~-~v~vi~~~~n-~G~~~A~N~G 141 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIIL-VDDYSNDPEDGALLGKIE-KVRVLRNDRR-EGLMRSRVRG 141 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEE-EECSCSCTHHHHGGGGBT-TEEEEECSSC-CHHHHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEE-EECCCCchHHHHHHhcCC-CEEEEECCCC-cCHHHHHHHH
Confidence 45666667663322213 34444332334 47765 557777642 1 111111 2333332111 0112211111
Q ss_pred ccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecCCceeeeeeccCC-----
Q 017628 180 DVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNN--GLTWQMT----KRRGDQEVHKVTEEKP----- 248 (368)
Q Consensus 180 div~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~~~~vHr~~~~~~----- 248 (368)
=-.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+.-. ...-...++.+....+
T Consensus 142 ~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (501)
T 2ffu_A 142 ADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRR 221 (501)
T ss_dssp HHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHH
T ss_pred HHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHh
Confidence 2235789999999999999999999999999887777777653211 1111000 0000000000000000
Q ss_pred CCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccc-hhhHhhhHhhcCCCCeEEEEeeeeEEecccC
Q 017628 249 GWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGW-GLDFALRRCVEPAHEKIGVVDSQWIIHQVIP 321 (368)
Q Consensus 249 g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGW-GLDf~~~~c~~~~~~kiGVVDa~~VvH~g~P 321 (368)
.+-.++..+-.+.++-..+=+|+|+++..+=.+ . +....| |=|+-+..-+.....++.++....|.|..+.
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-d-e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 222 SRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKY-D-MMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp HTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCC-C-TTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred hccCCCCCcccCccccceEEEEEHHHHHHhCCC-C-ccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 000011111011111122337899999887543 2 333467 4554443222223579999999999996443
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.23 E-value=2.8 Score=42.35 Aligned_cols=210 Identities=10% Similarity=0.067 Sum_probs=100.9
Q ss_pred CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEeCCCCCcc-cc-c-ccc--CcceEEEEeccccccccccc
Q 017628 108 KPKYLLTITVGLNQKKN----IDRMVKKFSED--FQIMLFHYDGQTSQW-DE-F-EWS--KSAIHVSIRRQTKWWYAKRF 176 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~----Vd~~v~kf~~~--F~v~LfhYDG~~~~w-~d-~-~ws--~~aihv~~~kqtKWw~akRf 176 (368)
.|+.-|.+++=-..... |+.+++.-..+ |.|++ .=||+.++- .+ + ++. ..-+++...... --++...
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIV-VDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVL-VDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEE-EECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEE-EECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHH
Confidence 45667777774332133 33333322234 46665 567877653 11 1 110 113444332211 1122222
Q ss_pred cCcccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eec---CCceeeeeeccC
Q 017628 177 LHPDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPNN--GLTWQMT----KRR---GDQEVHKVTEEK 247 (368)
Q Consensus 177 LHPdiv~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~---~~~~vHr~~~~~ 247 (368)
..-=-.+..|||++.|+|..++.-.++++++.+++..--+..|.++.-. .+.+... .+. ..... ++....
T Consensus 189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 267 (570)
T 2d7i_A 189 MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYY-KRIPIP 267 (570)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCE-EEECCC
T ss_pred HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccc-cccccc
Confidence 1111235789999999999999999999999998765445555442211 1111100 000 00000 011000
Q ss_pred CC-CCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccc-hhhHhhhHhhcCCCCeEEEEeeeeEEecccCC
Q 017628 248 PG-WCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGW-GLDFALRRCVEPAHEKIGVVDSQWIIHQVIPS 322 (368)
Q Consensus 248 ~g-~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGW-GLDf~~~~c~~~~~~kiGVVDa~~VvH~g~Pt 322 (368)
.. .-.++..+--+.++-..+=+|+|++|+.+=.+ ..+ ...| |=|+-+..-+.....+|.++....|.|.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-De~-~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 268 PELQKADPSDPFESPVMAGGLFAVDRKWFWELGGY-DPG-LEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp TTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSS-CTT-CCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred hhhhccCCCcceecccccceEEEEEHHHHHhcCCC-CCc-ccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 00 00000111111122222346899999888443 333 3467 44554433333345799999999999965443
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=87.75 E-value=1.1 Score=43.32 Aligned_cols=139 Identities=12% Similarity=0.066 Sum_probs=70.6
Q ss_pred ccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCceeeeeeccCCC-----C
Q 017628 182 VAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPGLEPN--NGLTWQ----MTKRRGDQEVHKVTEEKPG-----W 250 (368)
Q Consensus 182 v~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~ 250 (368)
.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.- ..+.+. .+...-...++.+....+. .
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR 191 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcc
Confidence 3679999999999999999999999999887665655654311 111110 0000000000000000000 0
Q ss_pred CCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccch-hhHhhhHhhcCCCCeEEEEeeeeEEecccCC
Q 017628 251 CSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWG-LDFALRRCVEPAHEKIGVVDSQWIIHQVIPS 322 (368)
Q Consensus 251 C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWG-LDf~~~~c~~~~~~kiGVVDa~~VvH~g~Pt 322 (368)
-.+...+-.+.++-..+=+|+|++|+.+=.+ ..+ ...|| =|+-+..-+.....++.++....|.|....+
T Consensus 192 ~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-de~-~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 192 KGDRTLPVRTPTMAGGLFSIDRDYFQEIGTY-DAG-MDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TTCTTSCEECSBCCSSSEEEEHHHHHHTTSC-CTT-SCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred cCCCCCcccCccccceeEEEEHHHHHHcCCC-CCc-ccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 0000111111111112235799999887443 233 33674 2433322222235799999999999975543
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=84.75 E-value=1 Score=45.14 Aligned_cols=210 Identities=17% Similarity=0.207 Sum_probs=100.8
Q ss_pred CCceEEEEEeccccccchhHHhhcc-----ccCcEEEEEEeCCCCCccccc--cccC-cceEEEEeccccccccccccCc
Q 017628 108 KPKYLLTITVGLNQKKNIDRMVKKF-----SEDFQIMLFHYDGQTSQWDEF--EWSK-SAIHVSIRRQTKWWYAKRFLHP 179 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~Vd~~v~kf-----~~~F~v~LfhYDG~~~~w~d~--~ws~-~aihv~~~kqtKWw~akRfLHP 179 (368)
.++.-|.+++ ++....+.+.++.. +.++.|+++. ||+.++=.++ ++.+ .-+++....+...-.+.....-
T Consensus 92 ~p~vsviIp~-~n~~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPT-YNRAKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEE-SSCHHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEec-CCcHHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 4566677766 33344555555543 2378887654 7776652221 1111 1244444332221111111111
Q ss_pred ccccCccEEEEecccccCCCCChHHHHHHHHHhC-CcccCCCccCCC-Cccee--e----eeec-CC----ceeeeeecc
Q 017628 180 DVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHG-LDISQPGLEPNN-GLTWQ--M----TKRR-GD----QEVHKVTEE 246 (368)
Q Consensus 180 div~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~S-~ish~--i----T~R~-~~----~~vHr~~~~ 246 (368)
=-.+.+|||++.|+|..++.-.+.++++.+++.. .-+.+|...... ...+. . ..+. +. ..+......
T Consensus 170 ~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (625)
T 2z86_A 170 LRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQ 249 (625)
T ss_dssp HHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------------
T ss_pred HHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhcc
Confidence 1135799999999999999999999999988743 334444321111 10000 0 0000 00 000000000
Q ss_pred --CCCC------CCC---CCCCCccceEEeecccccHHHHHHhhhhhcCCCcccch-hhHhhhHhhcCCCCeEEEEeeee
Q 017628 247 --KPGW------CSD---PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWG-LDFALRRCVEPAHEKIGVVDSQW 314 (368)
Q Consensus 247 --~~g~------C~~---~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWG-LDf~~~~c~~~~~~kiGVVDa~~ 314 (368)
...+ +.+ ....++ .++=.++-+|+|++++.+=. +..++ ..|| =|+-+..-+.....++..++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~rr~~l~~iGg-fde~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 326 (625)
T 2z86_A 250 NKSVDWRIEHFKNTDNLRLCNTPF-RFFSGGNVAFAKKWLFRAGW-FDEEF-THWGGEDNEFGYRLYREGCYFRSVEGAM 326 (625)
T ss_dssp --CCCTHHHHHHHTTTTTTCSCGG-GGCCTTEEEEETHHHHHHCC-CCTTC-SSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred CCccccchhhhcccccccccCCce-eEEeeceeeeEHHHHHHhCC-Ccccc-ccCCcchhhhhhhHHhCCceEEEcccch
Confidence 0000 000 001111 22333345789999988743 33343 4664 55554433333457999999999
Q ss_pred EEecccCC
Q 017628 315 IIHQVIPS 322 (368)
Q Consensus 315 VvH~g~Pt 322 (368)
+.|..-+.
T Consensus 327 v~H~~~~~ 334 (625)
T 2z86_A 327 AYHQEPPG 334 (625)
T ss_dssp EEEECCC-
T ss_pred hhccCCcc
Confidence 99975443
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=74.33 E-value=21 Score=35.60 Aligned_cols=99 Identities=18% Similarity=0.112 Sum_probs=54.6
Q ss_pred CCceEEEEEeccccccchhHHhhcc----ccCcEEEEEEeCCCCCcccc-c-cc--cCcceEEE-EeccccccccccccC
Q 017628 108 KPKYLLTITVGLNQKKNIDRMVKKF----SEDFQIMLFHYDGQTSQWDE-F-EW--SKSAIHVS-IRRQTKWWYAKRFLH 178 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~Vd~~v~kf----~~~F~v~LfhYDG~~~~w~d-~-~w--s~~aihv~-~~kqtKWw~akRfLH 178 (368)
.++.-+.+++ ++....+.+.++-. -.+|.|+++ =||++|+=.+ + ++ ...-+++. ..++++ +..+..
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiivv-dd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~---~~a~n~ 448 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCIC-DDGSTDDTLRILQEHYANHPRVRFISQKNKGI---GSASNT 448 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEEE-EESCSSSHHHHHHHHHTTCTTEEEEEECCCCH---HHHHHH
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEEE-ECcCChhHHHHHHHHHhhCCcEEEEeCCCCCH---HHHHHH
Confidence 4455566655 45556666655544 257888764 4676654211 1 11 01123333 223322 221111
Q ss_pred cccccCccEEEEecccccCCCCChHHHHHHHHH
Q 017628 179 PDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKK 211 (368)
Q Consensus 179 Pdiv~~YDYIflwDDDL~vd~f~i~ry~~Ivr~ 211 (368)
-=-.+..|||++.|+|..++.-.++++++.+++
T Consensus 449 g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 449 AVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp HHHHCCSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 111357899999999999888888888877654
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=66.40 E-value=8.1 Score=37.57 Aligned_cols=193 Identities=13% Similarity=0.063 Sum_probs=99.1
Q ss_pred CCceEEEEEeccccccchhHHhhcc-------ccCcEEEEEEeCCCCCccccccccCcceEEEE--------eccccccc
Q 017628 108 KPKYLLTITVGLNQKKNIDRMVKKF-------SEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSI--------RRQTKWWY 172 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~Vd~~v~kf-------~~~F~v~LfhYDG~~~~w~d~~ws~~aihv~~--------~kqtKWw~ 172 (368)
.++..|.+++ ++..+++.++++.. +.+|.|++ .=||++|+=.++-=.-.+..+.. .+++|-.-
T Consensus 93 ~p~vSVVIP~-yNe~~~l~~~l~sl~~~l~~~~~~~EIIV-VDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPS-RNVADTVGGIIDEIHALNERAPLIDQILV-VDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEE-SSCTTTHHHHHHHHHHHHHHSCCCSEEEE-EECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEc-CCCHHHHHHHHHHHHHHHhcCCCCeEEEE-EcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 5678888888 55556666666544 35787775 56888876433210111111111 13333221
Q ss_pred cccccCcccccCccEEEEeccccc-CCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCceeeeee----cc
Q 017628 173 AKRFLHPDVVAAYEYIFIWDEDLG-VEHFNGDKYMELVKKH-GLDISQPGLEPNNGLTWQMTKRRGDQEVHKVT----EE 246 (368)
Q Consensus 173 akRfLHPdiv~~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~----~~ 246 (368)
.+.-+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+................ +.....+-+.. ..
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~-~~~~g~v~~~~~~~l~~ 246 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE-EDGGGRVTELTAKPLFN 246 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C-CBCCSHHHHHTHHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc-cccCCchhhhhHHHHHH
Confidence 11111 1257999999999999 8999999999988765 56655543321100000000 00011000000 00
Q ss_pred --CCCCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccchhhHhhh-HhhcC-CCCeEEEEeeeeEEecc
Q 017628 247 --KPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALR-RCVEP-AHEKIGVVDSQWIIHQV 319 (368)
Q Consensus 247 --~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~-~c~~~-~~~kiGVVDa~~VvH~g 319 (368)
.+..+ .-.-|.++|. +|+|++++.+ .+ ..|||.|..+. +++.. .-++|.=|+-.+..|..
T Consensus 247 ~~~~~l~--~~~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 247 LFYPELA--GFVQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHCGGGT--TCSCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHhHhhc--cccccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000 0011223332 6899999876 33 25899986653 33222 22358888888888853
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=64.19 E-value=4.7 Score=34.20 Aligned_cols=108 Identities=20% Similarity=0.203 Sum_probs=61.1
Q ss_pred CCceEEEEEeccccccchhHHhhcc----ccCcEEEEEEeCCCCCccccc--ccc--CcceEEEE-eccccccccccccC
Q 017628 108 KPKYLLTITVGLNQKKNIDRMVKKF----SEDFQIMLFHYDGQTSQWDEF--EWS--KSAIHVSI-RRQTKWWYAKRFLH 178 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~Vd~~v~kf----~~~F~v~LfhYDG~~~~w~d~--~ws--~~aihv~~-~kqtKWw~akRfLH 178 (368)
.++.-|.+++ ++..+.+.++++-. ..+|.|++ .=||+.|+=.++ ++. ..-+.+.. .+++ .+.....
T Consensus 4 ~p~vsViIp~-yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G---~~~a~N~ 78 (240)
T 3bcv_A 4 IPKVSVIVPI-YNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPKICDDYAAQYPNIKVIHKKNAG---LGMACNS 78 (240)
T ss_dssp CCSEEEEEEE-SSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHHHHHHHHHHCSSEEEEECCCCC---HHHHHHH
T ss_pred CCcEEEEEec-CCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHHHHHHHHhhCCCEEEEECCCCC---hHHHHHH
Confidence 3456666666 44445555555543 24778775 557777642111 011 01133332 2222 1111111
Q ss_pred cccccCccEEEEecccccCCCCChHHHHHHHHHhCCcccCCC
Q 017628 179 PDVVAAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDISQPG 220 (368)
Q Consensus 179 Pdiv~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPA 220 (368)
-=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 79 g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 111256899999999999999999999999998777766544
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=60.64 E-value=8.3 Score=40.17 Aligned_cols=132 Identities=9% Similarity=-0.117 Sum_probs=67.7
Q ss_pred CccEEEEecccccCCCCChHHHHHHHHHh-CCcccCCCccC-CC-Cccee--eeeecCCceeee--------eeccCCCC
Q 017628 184 AYEYIFIWDEDLGVEHFNGDKYMELVKKH-GLDISQPGLEP-NN-GLTWQ--MTKRRGDQEVHK--------VTEEKPGW 250 (368)
Q Consensus 184 ~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~-~S-~ish~--iT~R~~~~~vHr--------~~~~~~g~ 250 (368)
.+|||++.|+|..++...++++++.++.. ...+..|.+-. +. ..-|. -........... ...+.+-.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 68999999999999999999999999876 34455553321 11 00000 000000000000 00000000
Q ss_pred -----CCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccchhhHhhhHhhcCCCCeEEEEeeeeEEec
Q 017628 251 -----CSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIIHQ 318 (368)
Q Consensus 251 -----C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqnDLvhGWGLDf~~~~c~~~~~~kiGVVDa~~VvH~ 318 (368)
+...+.+..+.++-..+-+|+|++++.+=.+. +.. .++=|.-|..-+.....++..+....|.|.
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd-~~F--~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL-PLF--IKWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC-SCS--SSSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCCh-hHh--ccCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 00000011112222223478999998874332 322 333665554333334578999999999994
No 10
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=53.09 E-value=24 Score=33.94 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=61.9
Q ss_pred CCceEEEEEeccccccchhHHhhccc--cCcEEEEEEeCCCCCcccccccc---CcceEEEEeccccccccccccCcccc
Q 017628 108 KPKYLLTITVGLNQKKNIDRMVKKFS--EDFQIMLFHYDGQTSQWDEFEWS---KSAIHVSIRRQTKWWYAKRFLHPDVV 182 (368)
Q Consensus 108 ~~kyLv~~~VG~~qk~~Vd~~v~kf~--~~F~v~LfhYDG~~~~w~d~~ws---~~aihv~~~kqtKWw~akRfLHPdiv 182 (368)
..++-+.|-+- +....+.++|+..+ +.-+=+++..-.....--+..|. ..++.|....+.+=-.-.||+-.+ .
T Consensus 27 ~~~FTvvi~ty-~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p~~-~ 104 (293)
T 1omz_A 27 LDSFTLIMQTY-NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQVFP-E 104 (293)
T ss_dssp TTCEEEEEEES-SCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSCCT-T
T ss_pred CCceEEEEEee-cccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCCCc-c
Confidence 34566666443 34555666666554 44444555554421111222342 224555555555444678886433 3
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHh
Q 017628 183 AAYEYIFIWDEDLGVEHFNGDKYMELVKKH 212 (368)
Q Consensus 183 ~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~ 212 (368)
-.-|+||..|||+.++..+++.=|+.-+++
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 458999999999999999999888887654
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=42.88 E-value=18 Score=35.59 Aligned_cols=183 Identities=14% Similarity=0.040 Sum_probs=93.8
Q ss_pred eEEEEEeccccccchhHHhhcc-----ccCcEEEEEEeCCCCCcccc-cc---------ccCcceEEEEe-----ccccc
Q 017628 111 YLLTITVGLNQKKNIDRMVKKF-----SEDFQIMLFHYDGQTSQWDE-FE---------WSKSAIHVSIR-----RQTKW 170 (368)
Q Consensus 111 yLv~~~VG~~qk~~Vd~~v~kf-----~~~F~v~LfhYDG~~~~w~d-~~---------ws~~aihv~~~-----kqtKW 170 (368)
++|.+|+ . .+++..+++.. ..++.|++ .=||++|+=.+ .+ ...+.+....+ +.+|=
T Consensus 2 slVIiP~-~--eE~I~~vl~~l~~~~~~~~~EIIV-VDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-K--HEHPEVLLHNVRVAAAHPRVHEVL-CIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-C--SSCHHHHHHHHHHHHHSTTCCEEE-EEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-C--ccCHHHHHHHHHHhccCCCeEEEE-EECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 5777886 2 25777777654 24688764 56888875222 11 11122322222 34442
Q ss_pred cccccccCcc-cccCccEEEEeccccc-CCCCChHHHHHHHHHhCCcccCCCccCC---CCcceeeeeecCCceeeeeec
Q 017628 171 WYAKRFLHPD-VVAAYEYIFIWDEDLG-VEHFNGDKYMELVKKHGLDISQPGLEPN---NGLTWQMTKRRGDQEVHKVTE 245 (368)
Q Consensus 171 w~akRfLHPd-iv~~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~~---S~ish~iT~R~~~~~vHr~~~ 245 (368)
.-++.=+--- -.+.+|+|.+.|-|+. .+...+.++++.+++ |.++..+..... +.+.+.+ .|. .+. ..+
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~---ll~-~~~ 151 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT---GFA-LLW 151 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH---HHH-HHC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH---HHH-HHH
Confidence 1111101001 1368999999999996 788889999987754 566655432111 1111100 000 000 000
Q ss_pred cCCCCCCCCCCCCccceEEeecccccHHHHHHhhhh-hcCCCcccchhhHhhhHhhcCCCCeEEEEe
Q 017628 246 EKPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHM-IQNDLVHGWGLDFALRRCVEPAHEKIGVVD 311 (368)
Q Consensus 246 ~~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~m-iqnDLvhGWGLDf~~~~c~~~~~~kiGVVD 311 (368)
+--.|...+.| -+||. +|+|++++.+... +.+ ..+|||.|..+...+.....+|.-|.
T Consensus 152 -~~~~~~~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 152 -PHTELSWIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp -TTSSGGGCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -HHhhccccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 00012112222 23444 5899999876431 001 46799999877766544456777665
No 12
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=39.75 E-value=8.8 Score=24.73 Aligned_cols=15 Identities=40% Similarity=0.651 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhhhee
Q 017628 8 LIITTFIGVLIGYFV 22 (368)
Q Consensus 8 ~~~~~~~~~~~g~~~ 22 (368)
+++++++|+.+|+|+
T Consensus 5 l~iavvlGa~~Gyf~ 19 (26)
T 2ls4_A 5 LCIAVAAGAGTGYFL 19 (26)
Confidence 578888899999886
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.64 E-value=12 Score=38.63 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=0.0
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHHhCCcc
Q 017628 183 AAYEYIFIWDEDLGVEHFNGDKYMELVKKHGLDI 216 (368)
Q Consensus 183 ~~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeI 216 (368)
+..|||++.|+|-.++...++++++.++..++-+
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~ 115 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLI 115 (729)
T ss_dssp ----------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEE
Confidence 5789999999999998888888888887444333
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=28.09 E-value=46 Score=29.30 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=26.5
Q ss_pred cCccEEEEecccccCCCCChHHHHHHHHH
Q 017628 183 AAYEYIFIWDEDLGVEHFNGDKYMELVKK 211 (368)
Q Consensus 183 ~~YDYIflwDDDL~vd~f~i~ry~~Ivr~ 211 (368)
+.-|||++.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56899999999999998889999999887
No 15
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.65 E-value=23 Score=32.62 Aligned_cols=31 Identities=19% Similarity=0.439 Sum_probs=23.9
Q ss_pred cCccEEEEeccc---ccCCCCChHHHHHHHHHhCCccc
Q 017628 183 AAYEYIFIWDED---LGVEHFNGDKYMELVKKHGLDIS 217 (368)
Q Consensus 183 ~~YDYIflwDDD---L~vd~f~i~ry~~Ivr~~gLeIS 217 (368)
..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 469999999999 888777777777 4455543
No 16
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=24.47 E-value=43 Score=25.03 Aligned_cols=14 Identities=21% Similarity=0.548 Sum_probs=10.1
Q ss_pred EEEEEeCCCCCccc
Q 017628 138 IMLFHYDGQTSQWD 151 (368)
Q Consensus 138 v~LfhYDG~~~~w~ 151 (368)
.+|+||||-.+.|+
T Consensus 42 ~~~VhfdGw~~~~D 55 (69)
T 3sd4_A 42 KVLIHFKRWNHRYD 55 (69)
T ss_dssp EEEEEETTSCGGGC
T ss_pred EEEEEeCCCCCCCC
Confidence 46899999655554
Done!