Query 017632
Match_columns 368
No_of_seqs 256 out of 1682
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 17:34:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017632.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017632hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 8.7E-45 3E-49 353.8 24.0 262 71-354 17-317 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 6.4E-44 2.2E-48 343.3 23.2 220 70-335 52-283 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 2.2E-44 7.5E-49 347.5 16.3 221 70-335 57-293 (383)
4 1b5f_A Protein (cardosin A); h 100.0 2.9E-44 1E-48 325.6 15.6 216 70-333 9-238 (239)
5 2apr_A Rhizopuspepsin; hydrola 100.0 5.4E-43 1.9E-47 331.5 22.5 220 71-338 12-245 (325)
6 3aup_A SBG7S, BG, basic 7S glo 100.0 6.8E-42 2.3E-46 333.1 24.8 261 71-354 18-309 (403)
7 1tzs_A Cathepsin E; hydrolase, 100.0 4.2E-42 1.4E-46 328.7 22.6 218 70-335 19-252 (351)
8 3cms_A Chymosin B; hydrolase, 100.0 1.7E-42 5.8E-47 327.8 17.2 217 70-334 10-239 (323)
9 4aa9_A Chymosin; hydrolase, as 100.0 2.3E-42 8E-47 326.4 18.0 220 70-335 7-237 (320)
10 1dpj_A Proteinase A; proteinas 100.0 8.2E-42 2.8E-46 323.9 20.7 215 70-334 9-241 (329)
11 1am5_A Pepsin, acid proteinase 100.0 4.7E-42 1.6E-46 324.9 18.7 216 70-334 8-237 (324)
12 1mpp_A Pepsin; hydrolase(acid 100.0 1E-41 3.5E-46 327.3 20.9 220 70-336 14-262 (361)
13 1htr_B Gastricsin; aspartyl pr 100.0 1.5E-41 5.1E-46 322.2 21.1 218 71-335 9-241 (329)
14 1qdm_A Prophytepsin; aspartic 100.0 9.7E-42 3.3E-46 337.6 20.6 221 70-334 48-282 (478)
15 1j71_A Candidapepsin, aspartic 100.0 1.3E-41 4.3E-46 323.3 19.6 215 72-335 10-242 (334)
16 2qzx_A Candidapepsin-5; aspart 100.0 1.6E-41 5.5E-46 323.6 19.8 215 72-335 10-242 (342)
17 1oew_A Endothiapepsin; hydrola 100.0 1.3E-41 4.6E-46 322.4 17.7 212 72-331 13-238 (329)
18 3pvk_A Candidapepsin-2; hydrol 100.0 3.3E-41 1.1E-45 321.4 20.3 216 72-335 10-242 (342)
19 3c9x_A Trichoderma reesei aspa 100.0 1.4E-41 4.7E-46 322.4 17.5 214 71-331 12-239 (329)
20 3fv3_A SAPP1P-secreted asparti 100.0 5.8E-41 2E-45 319.3 20.6 212 72-336 10-245 (339)
21 3k1w_A Renin; protease, altern 100.0 1.5E-41 5.3E-46 323.6 16.2 220 70-335 14-250 (341)
22 3lpj_A Beta-secretase 1; alzhe 100.0 2.7E-40 9.3E-45 326.6 24.3 238 72-353 72-335 (455)
23 1miq_A Plasmepsin; aspartic pr 100.0 3.1E-41 1E-45 325.2 16.1 212 70-336 58-287 (375)
24 3qvc_A Histo-aspartic protease 100.0 1.4E-40 4.8E-45 326.6 17.8 211 70-335 133-361 (451)
25 2ewy_A Beta-secretase 2; BACE2 100.0 8.8E-40 3E-44 316.3 22.7 221 72-336 11-251 (383)
26 2bju_A Plasmepsin II; aspartic 100.0 4.7E-41 1.6E-45 329.7 13.2 212 70-334 134-361 (453)
27 2qp8_A Beta-secretase 1; BACE1 100.0 1.9E-39 6.3E-44 315.2 23.6 220 72-336 19-262 (395)
28 3vf3_A Beta-secretase 1; struc 100.0 4.1E-39 1.4E-43 313.5 25.7 237 72-353 26-289 (402)
29 1t6e_X Xylanase inhibitor; two 100.0 1.2E-39 4.1E-44 315.0 20.2 248 70-354 10-287 (381)
30 1yg9_A Aspartic protease BLA G 100.0 6.3E-40 2.2E-44 311.0 16.7 215 70-335 13-243 (330)
31 1ibq_A Aspergillopepsin; aspar 100.0 1.9E-39 6.5E-44 307.1 18.1 209 72-331 12-234 (325)
32 1izd_A Aspartic proteinase; su 100.0 6.9E-39 2.4E-43 303.0 17.4 210 72-332 13-235 (323)
33 1bxo_A Protein (penicillopepsi 100.0 1.1E-38 3.8E-43 301.6 14.5 207 72-331 13-233 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 1.4E-37 4.8E-42 296.1 19.9 200 73-336 11-237 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 5.8E-23 2E-27 158.7 7.4 84 70-183 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 3.7E-21 1.3E-25 173.9 12.7 132 194-335 5-150 (241)
37 2hs1_A HIV-1 protease; ultra-h 87.5 0.69 2.4E-05 34.7 4.4 29 76-106 9-37 (99)
38 1fmb_A EIAV protease; hydrolas 86.7 0.65 2.2E-05 35.2 4.0 27 75-103 8-34 (104)
39 3ec0_A Protease; HIV-2, inhibi 85.2 1.1 3.7E-05 33.6 4.4 28 77-106 10-37 (99)
40 2i1a_A DNA damage-inducible pr 84.6 0.82 2.8E-05 36.7 3.9 31 72-104 23-53 (148)
41 3liy_A Protease; hydrolase, hy 80.5 1.4 4.7E-05 33.7 3.4 31 77-107 12-45 (116)
42 2hah_A Protease, retropepsin; 78.7 1.9 6.4E-05 33.3 3.8 27 75-104 14-40 (116)
43 2i1a_A DNA damage-inducible pr 78.1 2.3 7.9E-05 34.0 4.4 29 286-327 31-59 (148)
44 3s8i_A Protein DDI1 homolog 1; 77.4 1.9 6.5E-05 34.8 3.7 32 72-105 21-52 (148)
45 3s8i_A Protein DDI1 homolog 1; 77.4 1.8 6.1E-05 35.0 3.5 29 286-327 29-57 (148)
46 3sqf_A Protease; folded monome 75.5 2.9 0.0001 32.0 4.0 29 76-106 10-38 (114)
47 3slz_A GAG-Pro-POL polyprotein 70.2 5.2 0.00018 31.5 4.4 33 72-106 19-51 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 63.9 5.9 0.0002 33.6 3.8 27 76-104 9-35 (203)
49 1lya_A Cathepsin D; lysosomal 63.0 5.7 0.0002 29.3 3.2 16 308-323 30-45 (97)
50 2rsp_A RSV protease; hydrolase 62.8 7.3 0.00025 30.3 3.9 23 82-106 27-49 (124)
51 2hs1_A HIV-1 protease; ultra-h 45.8 11 0.00039 27.9 2.3 30 279-321 6-35 (99)
52 1fmb_A EIAV protease; hydrolas 45.5 12 0.00042 28.0 2.5 34 279-325 6-39 (104)
53 2hah_A Protease, retropepsin; 43.9 15 0.00051 28.2 2.8 31 277-321 10-40 (116)
54 3ec0_A Protease; HIV-2, inhibi 43.4 14 0.00046 27.5 2.4 30 278-320 5-34 (99)
55 3fv3_A SAPP1P-secreted asparti 43.1 16 0.00054 33.2 3.4 37 270-322 5-43 (339)
56 1wkr_A Polyporopepsin; hydrola 42.0 19 0.00065 32.7 3.8 15 308-322 29-43 (340)
57 1j71_A Candidapepsin, aspartic 41.3 17 0.00059 32.9 3.4 15 308-322 29-43 (334)
58 3ka2_A [L-Ala51;Gly51']HIV-1 p 41.2 23 0.00079 29.9 3.8 27 76-104 113-139 (203)
59 2qzx_A Candidapepsin-5; aspart 39.4 19 0.00066 32.7 3.4 15 308-322 29-43 (342)
60 3slz_A GAG-Pro-POL polyprotein 39.4 25 0.00085 27.6 3.5 28 283-323 24-51 (132)
61 1bxo_A Protein (penicillopepsi 37.3 24 0.00081 31.9 3.6 40 268-324 7-46 (323)
62 3pvk_A Candidapepsin-2; hydrol 36.3 23 0.00079 32.1 3.4 15 308-322 29-43 (342)
63 1izd_A Aspartic proteinase; su 35.9 26 0.00088 31.7 3.6 40 268-324 7-46 (323)
64 1yg9_A Aspartic protease BLA G 33.9 25 0.00087 31.8 3.2 30 277-322 17-46 (330)
65 1ibq_A Aspergillopepsin; aspar 33.2 26 0.0009 31.6 3.2 40 268-324 6-45 (325)
66 1b5f_A Protein (cardosin A); h 31.3 31 0.0011 29.6 3.2 15 308-322 30-44 (239)
67 1htr_B Gastricsin; aspartyl pr 30.4 39 0.0013 30.4 3.9 15 308-322 29-43 (329)
68 3c9x_A Trichoderma reesei aspa 28.4 41 0.0014 30.3 3.6 17 308-324 32-48 (329)
69 1oew_A Endothiapepsin; hydrola 27.7 43 0.0015 30.2 3.6 33 275-323 13-47 (329)
70 2apr_A Rhizopuspepsin; hydrola 27.5 38 0.0013 30.5 3.3 15 308-322 32-46 (325)
71 3sqf_A Protease; folded monome 25.7 51 0.0018 25.0 3.1 27 282-321 10-36 (114)
72 1dpj_A Proteinase A; proteinas 24.6 46 0.0016 29.9 3.2 15 308-322 30-44 (329)
73 1lya_B Cathepsin D; lysosomal 24.6 64 0.0022 27.4 4.0 32 74-105 99-137 (241)
74 1mpp_A Pepsin; hydrolase(acid 24.6 46 0.0016 30.4 3.3 41 266-322 6-49 (361)
75 2qp8_A Beta-secretase 1; BACE1 22.8 51 0.0017 30.5 3.2 15 308-322 38-52 (395)
76 3aup_A SBG7S, BG, basic 7S glo 22.7 51 0.0018 30.6 3.2 15 308-322 38-52 (403)
77 3cms_A Chymosin B; hydrolase, 22.6 53 0.0018 29.4 3.2 15 308-322 31-45 (323)
78 1am5_A Pepsin, acid proteinase 22.2 63 0.0021 28.9 3.6 15 308-322 29-43 (324)
79 3liy_A Protease; hydrolase, hy 21.9 46 0.0016 25.3 2.1 28 281-321 10-42 (116)
80 2ewy_A Beta-secretase 2; BACE2 21.8 56 0.0019 30.1 3.2 15 308-322 30-44 (383)
81 2rsp_A RSV protease; hydrolase 21.7 36 0.0012 26.3 1.5 14 308-321 34-47 (124)
82 4aa9_A Chymosin; hydrolase, as 21.7 57 0.002 29.1 3.2 15 308-322 28-42 (320)
83 3vf3_A Beta-secretase 1; struc 20.9 59 0.002 30.1 3.2 15 308-322 45-59 (402)
84 2x0b_A Renin; hydrolase-hormon 20.9 60 0.002 30.1 3.2 16 308-323 78-93 (383)
85 2bju_A Plasmepsin II; aspartic 20.3 62 0.0021 30.9 3.2 15 308-322 155-169 (453)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=8.7e-45 Score=353.80 Aligned_cols=262 Identities=23% Similarity=0.368 Sum_probs=210.1
Q ss_pred CCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC-
Q 017632 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL- 149 (368)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~- 149 (368)
..+++|+++|.||||||+|.|+|||||+++||+|..| .+|+||+.++|.++.|........
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~~ 78 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIACG 78 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEEE
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCCc
Confidence 4678999999999999999999999999999998764 369999999999999987543221
Q ss_pred -------CCCCCCCCCcceEEe-CCCCeEEEEEEEEEEEEecccCCcc-ccccCceeeeeeeeeccCCCCCCCCCCccee
Q 017632 150 -------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (368)
Q Consensus 150 -------~~C~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~~~~~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GI 220 (368)
..|. ++.|.|.+.| ++|+.+.|.+++|+|+|++..+... ....++++.|||+..+.... ....+|||
T Consensus 79 ~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g---~~~~~dGI 154 (413)
T 3vla_A 79 DCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN---LASGVVGM 154 (413)
T ss_dssp CCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT---SCTTCCEE
T ss_pred ccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC---cccccccc
Confidence 2343 3579999999 4877779999999999986433211 01246789999999863211 12468999
Q ss_pred eecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEeCCcCC---------CC-ceeecCCCCC-------------
Q 017632 221 IGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ------------- 276 (368)
Q Consensus 221 lGLg~~~~s~~~~l~~~~~i~~~Fsl~L~~~-~~~G~l~fGg~d~---------~~-~~~~p~~~~~------------- 276 (368)
||||++.+|++.||.++++++++||+||.+. ..+|.|+||++|. +. +.|+|++.++
T Consensus 155 lGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~ 234 (413)
T 3vla_A 155 AGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPS 234 (413)
T ss_dssp EECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCC
T ss_pred cccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCC
Confidence 9999999999999999998899999999984 5679999999873 35 9999998653
Q ss_pred CceEEEEeEEEECCEEeecCCcccccC--CCccEEEcccccccccChHHHHHHHHHHHhhCC--CCcc-cccCCcCceee
Q 017632 277 PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP--DLKV-HTVHDEYTCFQ 351 (368)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~--~~~~-~~~~~~~~C~~ 351 (368)
.+|+|.|++|+||++.+.++...|..+ +.+++||||||++++||+++|++|.++|.+++. +++. .....+..||+
T Consensus 235 ~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~ 314 (413)
T 3vla_A 235 VEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFS 314 (413)
T ss_dssp CSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEE
T ss_pred ceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceec
Confidence 699999999999999998877666533 457899999999999999999999999998764 2221 12234568999
Q ss_pred ecc
Q 017632 352 YSE 354 (368)
Q Consensus 352 ~~~ 354 (368)
.+.
T Consensus 315 ~~~ 317 (413)
T 3vla_A 315 TDN 317 (413)
T ss_dssp CTT
T ss_pred cCC
Confidence 863
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.4e-44 Score=343.31 Aligned_cols=220 Identities=26% Similarity=0.405 Sum_probs=187.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|+||||||+|+|+|||||+++||+|..|..| .|..++.|||++|+|++..
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~-----~C~~~~~y~~~~SsT~~~~--------------- 111 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL-----ACSDHNQFNPDDSSTFEAT--------------- 111 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG-----GGTTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc-----ccCCCCCCCCccCcCcEEC---------------
Confidence 57789999999999999999999999999999999988643 2445689999999999984
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+... ....+|||||||++..
T Consensus 112 -------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~~s 173 (370)
T 3psg_A 112 -------SQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL--YYAPFDGILGLAYPSIS 173 (370)
T ss_dssp -------EEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEEEECSCGGGC
T ss_pred -------CcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeeccccc--ccCCccceeccCCcccc
Confidence 479999999998 5999999999999854 56899999998765322 3456899999999754
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecCC
Q 017632 229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (368)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (368)
+++++|++||+| +++||+||.+. ..+|.|+|||+|+ +++.|+|+. ++.+|.|.|++|+|+++.+..
T Consensus 174 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~-- 250 (370)
T 3psg_A 174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC-- 250 (370)
T ss_dssp GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC--
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec--
Confidence 589999999999 69999999985 4589999999995 679999997 568999999999999987642
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 298 ~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
..++.+||||||+++++|++++++|.+++++..
T Consensus 251 -----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 283 (370)
T 3psg_A 251 -----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE 283 (370)
T ss_dssp -----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE
T ss_pred -----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc
Confidence 235789999999999999999999999997764
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.2e-44 Score=347.50 Aligned_cols=221 Identities=24% Similarity=0.378 Sum_probs=185.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|+||||||+|+|+|||||+++||+|..|.. ....|..++.|||++|+||+..
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~---~~~~C~~~~~y~~~~SsT~~~~--------------- 118 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---LYTACVYHKLFDASDSSSYKHN--------------- 118 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---TSHHHHTSCCBCGGGCTTCEEE---------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCC---CcccccCCCCCCCCCCCcEEEC---------------
Confidence 4578899999999999999999999999999999988852 1112334489999999999983
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (368)
+|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++...+... ....+|||||||++..
T Consensus 119 -------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~~~~s 179 (383)
T 2x0b_A 119 -------GTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPF--MLAEFDGVVGMGFIEQA 179 (383)
T ss_dssp -------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHH--TTCSSSEEEECSCGGGC
T ss_pred -------CcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCccc--ccCCCceEeccCCCccc
Confidence 479999999998 5999999999998753 56 99999998754211 2356899999999764
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC-C----CcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 229 -----SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fsl~L~~~-~----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
+++++|++||+| +++||+||.+. . .+|.|+|||+|+. ++.|+|+. ...+|+|.|++|+|+++.+
T Consensus 180 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~~~~~ 258 (383)
T 2x0b_A 180 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSSTL 258 (383)
T ss_dssp GGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEESSCCC
T ss_pred cCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeCCceE
Confidence 489999999999 69999999886 2 2799999999964 68999997 5689999999999999864
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
. ...++.+||||||+++++|++++++|.+++++..
T Consensus 259 ~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 293 (383)
T 2x0b_A 259 L-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK 293 (383)
T ss_dssp B-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred E-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc
Confidence 2 1346789999999999999999999999997754
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-44 Score=325.57 Aligned_cols=216 Identities=28% Similarity=0.418 Sum_probs=184.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC---CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~---~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~ 146 (368)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 69 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKEN------------ 69 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeC------------
Confidence 456789999999999999999999999999999999886 4543 478999999999984
Q ss_pred CCCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCC-CCCCCCCCcceeeecCC
Q 017632 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGK 225 (368)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~ 225 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. +.++.||++....+. | ....++||||||+
T Consensus 70 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~f---~~~~~~GilGLg~ 127 (239)
T 1b5f_A 70 ----------GTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNVF---LHRLFDGILGLSF 127 (239)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TTCSCCEEEECSC
T ss_pred ----------CcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCccc---cccCcceEEecCc
Confidence 368999999998 5999999999998753 568999999876532 2 2345799999999
Q ss_pred CCCc--HHHHhhhcCCC-CCceEEeecCC---CCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeec
Q 017632 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (368)
Q Consensus 226 ~~~s--~~~~l~~~~~i-~~~Fsl~L~~~---~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (368)
+..+ ++++|++|++| +++||+||.+. ...|.|+||++|+. ++.|+|+. ...+|.|.|++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8865 78899999999 59999999874 35799999999964 57899997 467999999999999998754
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHh
Q 017632 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS 333 (368)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 333 (368)
.. ....+||||||++++||++++++|+++|++
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 246799999999999999999999999875
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.4e-43 Score=331.46 Aligned_cols=220 Identities=26% Similarity=0.430 Sum_probs=188.6
Q ss_pred CCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCC
Q 017632 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (368)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (368)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| |..++.|||++|+|++..
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c------~~~~~~y~~~~SsT~~~~---------------- 69 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC------GSGQTKYDPNQSSTYQAD---------------- 69 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC------CTTSCCBCGGGCTTCEEE----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH------hcCCCCCCcccCCCeeeC----------------
Confidence 4678999999999999999999999999999999999888 234589999999999972
Q ss_pred CCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 017632 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (368)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (368)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.|. ....+||||||++..
T Consensus 70 ------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~---~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 70 ------GRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFA---SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp ------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TSSCSEEEECSCGGGCS
T ss_pred ------CCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCcccc---cCCCceEEEeCCccccc
Confidence 47999999999978999999999998754 56899999998765442 234899999998753
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC--CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecC
Q 017632 229 -----SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (368)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fsl~L~~~--~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (368)
+++++|++||+| +++||+||.+. ...|.|+||++|+ +++.|+|+..+.++|.|.+++|+|+++ +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 589999999999 69999999653 5679999999985 568999997667899999999999983 31
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCC
Q 017632 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDL 338 (368)
Q Consensus 297 ~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~~~ 338 (368)
.....+||||||++++||+++|++|++++.++++..
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~ 245 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD 245 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC
Confidence 124579999999999999999999999998877643
No 6
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.8e-42 Score=333.11 Aligned_cols=261 Identities=22% Similarity=0.352 Sum_probs=200.0
Q ss_pred CCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC---
Q 017632 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG--- 147 (368)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~--- 147 (368)
+.+++|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.++|.++.|......
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~C~~~~~~~c~ 79 (403)
T 3aup_A 18 GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQCSRANTHQCL 79 (403)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHHHHHTTCCCEE
T ss_pred CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCccccCccccCcc
Confidence 4678999999999999999999999999999998653 3689999999999989765432
Q ss_pred -----CCCCCCCCCCCcceEEeC-CCCeEEEEEEEEEEEEecccCCc---cccccCceeeeeeeeeccCC-CCCCCCCCc
Q 017632 148 -----PLTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDL---QTTSTNGSLIFGCGARQSGN-LDSTNEEAL 217 (368)
Q Consensus 148 -----~~~~C~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~~~~~~~~~---~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~ 217 (368)
....|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++..+.. .....++++.|||+...... + .....
T Consensus 80 ~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~---~~~~~ 155 (403)
T 3aup_A 80 SCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKG---LPRNT 155 (403)
T ss_dssp ECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSS---SSTTC
T ss_pred ccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccC---CCCCC
Confidence 123453 35799999998 78888999999999999843221 00124678999999986433 2 23568
Q ss_pred ceeeecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEeCCcCC-------C-----CceeecCCCC-CCceEEEE
Q 017632 218 DGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLVPN-QPHYSINM 283 (368)
Q Consensus 218 ~GIlGLg~~~~s~~~~l~~~~~i~~~Fsl~L~~~-~~~G~l~fGg~d~-------~-----~~~~~p~~~~-~~~w~v~l 283 (368)
+||||||++..+++.||.+..+.+++||+||.+. ...|.|+||+ |+ + ++.|+|++.+ ..+|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 9999999999999999976544479999999885 5689999999 63 3 7899999855 37999999
Q ss_pred eEEEECCEEe-ecCCcccc--cCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcc-cccCCcCceeeecc
Q 017632 284 TAVQVGLDFL-NLPTDVFG--VGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKV-HTVHDEYTCFQYSE 354 (368)
Q Consensus 284 ~~i~v~~~~~-~~~~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~-~~~~~~~~C~~~~~ 354 (368)
++|+|+++.+ .++...+. ..+..++||||||++++||+++|++|+++|.+++..... .....+++||+.+.
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGG
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCC
Confidence 9999999988 66554442 123567999999999999999999999999887654322 12234568998763
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=328.71 Aligned_cols=218 Identities=24% Similarity=0.386 Sum_probs=186.5
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 77 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQ-------------- 77 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBC--------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEE--------------
Confidence 456789999999999999999999999999999999886 4653 47999999999997
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
..|.|.+.|++|+ +.|.+++|+|+|++.. +.++.|||+....+... .....+||||||++.
T Consensus 78 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 138 (351)
T 1tzs_A 78 --------PGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTF--VDAEFDGILGLGYPS 138 (351)
T ss_dssp --------CSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEEEECSCGG
T ss_pred --------CCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEecccccc--ccCCCceEEecCCcc
Confidence 4579999999998 5999999999998754 56899999988655321 234679999999976
Q ss_pred C------cHHHHhhhcCCC-CCceEEeecCCC---CcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 228 S------SMISQLASSGGV-RKMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fsl~L~~~~---~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
. +++++|++||+| +++||+||.+.. ..|.|+|||+|+ +++.|+|+. ...+|.|.|++|+|+++.+
T Consensus 139 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~ 217 (351)
T 1tzs_A 139 LAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVM 217 (351)
T ss_dssp GSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEE
T ss_pred ccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceE
Confidence 4 589999999999 699999998862 279999999985 578999997 4689999999999999875
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
.. .....+||||||++++||++++++|.+++++..
T Consensus 218 ~~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 252 (351)
T 1tzs_A 218 FC-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP 252 (351)
T ss_dssp EC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred Ec-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc
Confidence 31 235679999999999999999999999997654
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.7e-42 Score=327.80 Aligned_cols=217 Identities=23% Similarity=0.366 Sum_probs=185.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 69 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNL------------- 69 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEEC-------------
Confidence 456789999999999999999999999999999999884 4653 478999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+... .....+||||||++.
T Consensus 70 ---------~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 129 (323)
T 3cms_A 70 ---------GKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFF--TYAEFDGILGMAYPS 129 (323)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HHSSCSEEEECSCGG
T ss_pred ---------CcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEecccccc--cccCCceEEecCcch
Confidence 478999999998 5999999999998754 56899999998654211 124579999999875
Q ss_pred C------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeecC
Q 017632 228 S------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (368)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (368)
. +++++|++|++| +++||+||.+....|.|+||++|+. ++.|+|+. ...+|.|.|++|+|+++.+..+
T Consensus 130 ~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 130 LASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST
T ss_pred hhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC
Confidence 3 689999999999 6999999998644599999999964 58999997 5689999999999999887532
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 017632 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (368)
Q Consensus 297 ~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~ 334 (368)
....+||||||+++++|++++++|.+++++.
T Consensus 209 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 239 (323)
T 3cms_A 209 -------GGCQAILDTGTSKLVGPSSDILNIQQAIGAT 239 (323)
T ss_dssp -------TCEEEEECTTCCSEEECHHHHHHHHHHHTCE
T ss_pred -------CCcEEEEecCCccEeCCHHHHHHHHHHhCCe
Confidence 3467999999999999999999999999764
No 9
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.3e-42 Score=326.45 Aligned_cols=220 Identities=24% Similarity=0.385 Sum_probs=186.9
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|.||||+|+++|++||||+++||+|..|..| .|..++.|||++|+|++..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~-----~C~~~~~y~~~~SsT~~~~--------------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSN-----VCKNHHRFDPRKSSTFRNL--------------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSH-----HHHTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcc-----ccCCCCCCCCCCCcCeEcC---------------
Confidence 56788999999999999999999999999999999998732 1233489999999999984
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC--
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN-- 227 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~-- 227 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+... .....+||||||++.
T Consensus 67 -------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s 128 (320)
T 4aa9_A 67 -------GKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF--TYSEFDGILGLAYPSLA 128 (320)
T ss_dssp -------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HSCCCSEEEECSCGGGS
T ss_pred -------CcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc--cccCcccEEecCccccc
Confidence 379999999998 5999999999999854 56899999998765211 234579999999864
Q ss_pred ----CcHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeecCCc
Q 017632 228 ----SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (368)
Q Consensus 228 ----~s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~ 298 (368)
.+++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.+..+
T Consensus 129 ~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~-- 205 (320)
T 4aa9_A 129 SEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV-- 205 (320)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST--
T ss_pred ccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC--
Confidence 3599999999999 6999999998656899999999964 58999996 5689999999999999887532
Q ss_pred ccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 299 ~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
....++|||||++++||++++++|.+++++..
T Consensus 206 -----~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 237 (320)
T 4aa9_A 206 -----GGCQAILDTGTSVLFGPSSDILKIQMAIGATE 237 (320)
T ss_dssp -----TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE
T ss_pred -----CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc
Confidence 34679999999999999999999999997653
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=8.2e-42 Score=323.94 Aligned_cols=215 Identities=26% Similarity=0.462 Sum_probs=184.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCC--CCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~--C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|.. |.. ++.|||++|+|++.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL-------HSKYDHEASSSYKA-------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC-------cCcCCcccCcCeEE--------------
Confidence 4567899999999999999999999999999999999875 543 47899999999997
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccC-CCCCCCCCCcceeeecCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GIlGLg~~ 226 (368)
+.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .+ .....+||||||++
T Consensus 68 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 127 (329)
T 1dpj_A 68 --------NGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTF---AFGKFDGILGLGYD 127 (329)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHH---TTCSCSEEEECSCG
T ss_pred --------CCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccc---ccCCcceEEEeCCc
Confidence 3579999999995 6999999999998753 56899999998654 22 23457999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCCC----CcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCE
Q 017632 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (368)
Q Consensus 227 ~~------s~~~~l~~~~~i-~~~Fsl~L~~~~----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (368)
.. +++++|++||+| +++||+||.+.. .+|.|+||++|+. ++.|+|+. ++.+|.|.|++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 478999999999 699999998752 3799999999964 58899997 56899999999999998
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 017632 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~ 334 (368)
.+.. ....+||||||++++||++++++|.++++++
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 241 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK 241 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc
Confidence 7752 2467999999999999999999999999765
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.7e-42 Score=324.94 Aligned_cols=216 Identities=23% Similarity=0.389 Sum_probs=185.8
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 67 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVET------------- 67 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeC-------------
Confidence 456789999999999999999999999999999999886 3543 478999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
.|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++...+... .....+||||||++.
T Consensus 68 ---------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 68 ---------GKTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ--AAAPFDGILGLAYPS 127 (324)
T ss_dssp ---------EEEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT--TTCSSSEEEECSCGG
T ss_pred ---------CcEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccc--cCCCCceEEecCCcc
Confidence 4799999999987 999999999998753 56899999998765322 245689999999975
Q ss_pred C------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeec
Q 017632 228 S------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (368)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (368)
. +++++|++||+| +++||+||.+. ...|.|+||++|+ +++.|+|+. ...+|.|.|++|+|+++.+..
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec
Confidence 4 589999999999 69999999886 3589999999985 578999997 468999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 017632 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (368)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~ 334 (368)
.+ ..++|||||++++||++++++|.++++++
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 12 67999999999999999999999999775
No 12
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1e-41 Score=327.32 Aligned_cols=220 Identities=24% Similarity=0.372 Sum_probs=187.5
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC---CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~---~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~ 146 (368)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 74 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG-------KRFFDPSSSSTFKET------------ 74 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS-------SCCBCGGGCTTCEEE------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC-------CCcCCCccCCceEec------------
Confidence 456789999999999999999999999999999999987 6654 479999999999984
Q ss_pred CCCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccC-----CCCCCCCCCcceee
Q 017632 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-----NLDSTNEEALDGII 221 (368)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~GIl 221 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .+. .....+|||
T Consensus 75 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~~--~~~~~~Gil 133 (361)
T 1mpp_A 75 ----------DYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSPD--SELFLDGIF 133 (361)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCTT--CSSCCCEEE
T ss_pred ----------CCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCcccccccc--ccCCCCCEE
Confidence 379999999999 5999999999998753 56899999998765 221 245689999
Q ss_pred ecCCCC------------CcHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCC----CCceeecCCCCCC---ceEE
Q 017632 222 GFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQP---HYSI 281 (368)
Q Consensus 222 GLg~~~------------~s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~---~w~v 281 (368)
|||++. .+++++|++||+| +++||+||.+....|.|+||++|+ +++.|+|+....+ +|.|
T Consensus 134 GLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 134 GAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp ECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred EeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 999863 4588899999999 699999999854589999999985 5789999975544 8999
Q ss_pred EEeEEEECCEEeecCCcccccCCCccEE-EcccccccccChHHHHHHHHHHHhhCC
Q 017632 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~ai-iDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
.|++|+|+++.+... ....+| |||||++++||++++++|+++++++++
T Consensus 214 ~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~ 262 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT 262 (361)
T ss_dssp EEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE
T ss_pred EEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc
Confidence 999999999876421 235699 999999999999999999999987643
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.5e-41 Score=322.16 Aligned_cols=218 Identities=24% Similarity=0.439 Sum_probs=185.9
Q ss_pred CCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCC--CCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCC
Q 017632 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (368)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~--C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~ 148 (368)
+.+.+|+++|.||||+|+++|+|||||+++||+|..|.. |.. ++.|||++|+|++..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~-------------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTN-------------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE--------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEEC--------------
Confidence 467899999999999999999999999999999998863 543 479999999999984
Q ss_pred CCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC
Q 017632 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (368)
Q Consensus 149 ~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 228 (368)
.|.|.+.|++|+. .|.+++|+|+|++.. +.++.|||+....+... .....+||||||++..
T Consensus 68 --------~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 68 --------GQTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp --------EEEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred --------CcEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 4799999999986 999999999998754 56899999998755321 2346899999999764
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCC-C-cceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeec
Q 017632 229 ------SMISQLASSGGV-RKMFAHCLDGIN-G-GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (368)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fsl~L~~~~-~-~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (368)
+++++|++||+| +++||+||.+.. . .|.|+||++|+. ++.|+|+. ...+|.|.|++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 589999999999 699999999863 2 799999999964 58999997 568999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
......++|||||++++||++++++|.++++++.
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~ 241 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE 241 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCee
Confidence 1235679999999999999999999999997754
No 14
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=9.7e-42 Score=337.62 Aligned_cols=221 Identities=27% Similarity=0.370 Sum_probs=184.8
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|.||||+|+|+|+|||||+++||+|..|.. ...|..++.|||++|+||+.
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----~~~C~~~~~y~~~~SsT~~~---------------- 107 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----SIACYLHSRYKAGASSTYKK---------------- 107 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----CGGGGGSCCBCGGGCTTCBC----------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----CccccCCCCCCcccCCCeee----------------
Confidence 4567899999999999999999999999999999998851 11233458999999999987
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (368)
.++.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+... ....++||||||++..
T Consensus 108 ------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~~~s 170 (478)
T 1qdm_A 108 ------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITF--LVAKFDGILGLGFKEIS 170 (478)
T ss_dssp ------CCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHH--HHCSSSEEEECSCGGGC
T ss_pred ------CCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCccc--ccccccceecccccccc
Confidence 3579999999998 5999999999998754 56899999988654311 1345799999999765
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC---CCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeec
Q 017632 229 -----SMISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (368)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fsl~L~~~---~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (368)
+++++|++||+| +++||+||.+. ..+|.|+|||+|+. ++.|+|+. ..++|.|.|++|+|+++.+.+
T Consensus 171 ~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~ 249 (478)
T 1qdm_A 171 VGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKSTGF 249 (478)
T ss_dssp GGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEECST
T ss_pred cCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEEEee
Confidence 478999999999 59999999875 34799999999975 47899996 568999999999999988654
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 017632 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (368)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~ 334 (368)
.. .+..+||||||+++++|++++++|.++|++.
T Consensus 250 ~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (478)
T 1qdm_A 250 CA------GGCAAIADSGTSLLAGPTAIITEINEKIGAA 282 (478)
T ss_dssp TT------TCEEEEECSSCCSEEECHHHHHHHHHHHTCC
T ss_pred cC------CCceEEEcCCCCceeCCHHHHHHHHHHhCcc
Confidence 32 3567999999999999999999999999764
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-41 Score=323.30 Aligned_cols=215 Identities=20% Similarity=0.326 Sum_probs=184.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCC--CCCCCCC--CCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~--~C~~C~~--~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
.+.+|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL------------- 76 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC-------------
Confidence 3678999999999999999999999999999976 6765421 1234666789999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 77 ---------NQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ---------EEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC---------CCccEEEEcCCc
Confidence 47999999999988999999999998753 5689999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCCCC----ceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 228 ~--------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+.+ +.|+|+. ...+|.|.|++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 3 799999999999 59999999875 568999999999754 7899997 4569999999999999887
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATW 242 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcc
Confidence 53 2459999999999999999999999998765
No 16
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.6e-41 Score=323.61 Aligned_cols=215 Identities=23% Similarity=0.351 Sum_probs=185.0
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCC--CCCCCCC--CCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~--~C~~C~~--~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
.+.+|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL------------- 76 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-------------
Confidence 4678999999999999999999999999999976 6765532 2335667789999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 77 ---------NTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ---------CCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 37999999999988999999999998753 5689999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 228 ~--------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.|++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEec
Confidence 3 799999999999 59999999875 5689999999986 468999997 4569999999999999887
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQM 242 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCee
Confidence 53 2459999999999999999999999998765
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.3e-41 Score=322.42 Aligned_cols=212 Identities=24% Similarity=0.392 Sum_probs=180.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.||||+|+++|+|||||+++||+|..|..|.. .++.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57889999999999999999999999999999999987742 35799999999999864
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (368)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 36899999999977999999999998754 56899999998655331 1235799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecCC
Q 017632 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (368)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (368)
+++++|+++ | +++||+||.+ ...|.|+|||+|+ +++.|+|+..++.+|.|.|++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 488999987 6 6999999987 4689999999996 468999998667899999999999997653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHH
Q 017632 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKI 331 (368)
Q Consensus 298 ~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i 331 (368)
.....+||||||++++||++++++|++++
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i 238 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQV 238 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTS
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhC
Confidence 12356999999999999999999998877
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.3e-41 Score=321.42 Aligned_cols=216 Identities=25% Similarity=0.381 Sum_probs=186.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCC--CCCCCC--CCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~--C~~C~~--~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
.+++|+++|.||||+|+++|++||||+++||++.. |..|.. ....|..++.|||++|+|++.+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 46789999999999999999999999999999875 766643 22346677899999999999854
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC---------CCccEEEecCcc
Confidence 6999999999978999999999999754 5689999998753 368999999976
Q ss_pred -------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEee
Q 017632 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (368)
Q Consensus 228 -------~s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 294 (368)
.+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 4799999999999 59999999875 4579999999986 468999997 45699999999999999875
Q ss_pred cCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 295 ~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
.. +..++|||||++++||++++++|++++++++
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 32 2569999999999999999999999998765
No 19
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.4e-41 Score=322.37 Aligned_cols=214 Identities=26% Similarity=0.371 Sum_probs=181.6
Q ss_pred CCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCC
Q 017632 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (368)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (368)
..+..|+++|.||||+|+++|+|||||+++||+|..|..|.. ..++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----~~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSA-----TGHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCcccc-----CCCCcCCcccCcCceEcC---------------
Confidence 467899999999999999999999999999999999987642 234799999999999853
Q ss_pred CCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 017632 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (368)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (368)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+. .....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 47999999999977999999999998754 56899999998655331 1235799999998643
Q ss_pred -------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecC
Q 017632 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (368)
Q Consensus 229 -------s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (368)
+++++|+++ | +++||+||.+ ...|.|+||++|+ +++.|+|+..+.++|.|.|++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 489999986 6 6999999987 4689999999985 568999998667899999999999998653
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHH
Q 017632 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKI 331 (368)
Q Consensus 297 ~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i 331 (368)
.....+||||||++++||++++++|++++
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i 239 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANV 239 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTC
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhC
Confidence 12467999999999999999999998877
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.8e-41 Score=319.35 Aligned_cols=212 Identities=23% Similarity=0.323 Sum_probs=180.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCC--CCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~--C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
.++.|+++|.||||+|+++|+|||||+++||++.. |..|. .|..++.|||++|+|++.+.
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~----~C~~~~~y~~~~SsT~~~~~-------------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV----DCKSSGTFTPSSSSSYKNLG-------------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC----CTTTTCCBCGGGCTTCEEEE--------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC----CCCCCCcCCCccCcceeeCC--------------
Confidence 46789999999999999999999999999999543 43221 13345899999999999854
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (368)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+ .+||||||++..
T Consensus 72 --------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~~~~ 126 (339)
T 3fv3_A 72 --------AAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYTSNE 126 (339)
T ss_dssp --------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCGGGC
T ss_pred --------ceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCcccc
Confidence 6999999999888999999999999854 56899999998542 589999998753
Q ss_pred ---------------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEE
Q 017632 229 ---------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (368)
Q Consensus 229 ---------------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~ 287 (368)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 205 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLASVN 205 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEEEEE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEEEEE
Confidence 389999999999 59999999876 4589999999986 468999997 4569999999999
Q ss_pred ECCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 017632 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
|+++.+... ..++|||||++++||++++++|++++.+++.
T Consensus 206 v~g~~~~~~---------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~ 245 (339)
T 3fv3_A 206 LKGSSFSFG---------DGALLDSGTTLTYFPSDFAAQLADKAGARLV 245 (339)
T ss_dssp ESSCEEEEE---------EEEEECTTBSSEEECHHHHHHHHHHHTCEEE
T ss_pred ECCEeecCC---------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEc
Confidence 999987532 4599999999999999999999999987653
No 21
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.5e-41 Score=323.56 Aligned_cols=220 Identities=24% Similarity=0.393 Sum_probs=186.5
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|.||||+|+++|++||||+++||+|..|..|. ..|..++.|||++|+|++..
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~---~~C~~~~~y~~~~SsT~~~~--------------- 75 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY---TACVYHKLFDASDSSSYKHN--------------- 75 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC---HHHHTSCCBCGGGCTTCEEE---------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC---CcccCCCCCCCCcCcCeeEC---------------
Confidence 456889999999999999999999999999999999887321 12334589999999999973
Q ss_pred CCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCC-CCCCCCCCcceeeecCCCCC
Q 017632 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (368)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~~~ 228 (368)
.|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||+....+. + .....+||||||++..
T Consensus 76 -------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~---~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 76 -------GTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPF---MLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp -------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHH---TTCSSSEEEECSCGGG
T ss_pred -------CCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccc---ccCCcceEEECCchhh
Confidence 479999999998 5999999999998753 5 8999999987653 2 2345799999999764
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCC-----CcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEE
Q 017632 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (368)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fsl~L~~~~-----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~ 292 (368)
+++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 489999999999 699999998852 3799999999964 57999997 678999999999999987
Q ss_pred eecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
+.. .....++|||||++++||++++++|++++++..
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 250 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK 250 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCee
Confidence 532 234679999999999999999999999997764
No 22
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.7e-40 Score=326.60 Aligned_cols=238 Identities=22% Similarity=0.297 Sum_probs=190.8
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.||||+|+|+|+|||||+++||+|..| |. .++.|||++|+||+..
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~-------~~~~y~~~~SsT~~~~----------------- 125 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF-------LHRYYQRQLSSTYRDL----------------- 125 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT-------CSCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc-------cCCcccCCCCCCcccC-----------------
Confidence 455899999999999999999999999999999887 43 3479999999999984
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC----
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN---- 227 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~---- 227 (368)
.|.|.+.|++|+. .|.+++|+|+|++... ....+.|+++....+.+. .....+||||||++.
T Consensus 126 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~------~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~ 191 (455)
T 3lpj_A 126 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIARP 191 (455)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred -----CccEEEEeCCeEE-EEEEEEEEEEECCCcc------eeeEEEEEEEEccCcccc--cCCCcceEEEeCccccccc
Confidence 3799999999997 9999999999985210 011357888887665542 235689999999864
Q ss_pred ----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEE
Q 017632 228 ----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQV 288 (368)
Q Consensus 228 ----~s~~~~l~~~~~i~~~Fsl~L~~~-----------~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v 288 (368)
.+++++|++|++|+++||+||.+. ...|.|+||++|+. ++.|+|+. +..+|.|.+++|+|
T Consensus 192 ~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 270 (455)
T 3lpj_A 192 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 270 (455)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEE
T ss_pred cCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEEE
Confidence 368999999999988999999752 35799999999964 58899997 56899999999999
Q ss_pred CCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcccc---cCCcCceeeec
Q 017632 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~---~~~~~~C~~~~ 353 (368)
+++.+.++...+ +...+||||||++++||++++++|+++|.+......... ......|++.+
T Consensus 271 ~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~ 335 (455)
T 3lpj_A 271 NGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 335 (455)
T ss_dssp TTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT
T ss_pred CCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceeccccc
Confidence 999887654433 246799999999999999999999999999865221111 11134788764
No 23
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.1e-41 Score=325.17 Aligned_cols=212 Identities=21% Similarity=0.377 Sum_probs=182.3
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+|++..
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~-------~~~~y~~~~SsT~~~~------------- 117 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCS-------IKNLYDSSKSKSYEKD------------- 117 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGG-------GSCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCccccc-------CCCcCCCccCCceEEC-------------
Confidence 356789999999999999999999999999999999886 454 4589999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeee----ccCCCCCCCCCCcceeeec
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (368)
+|.|.+.|++|+ +.|.+++|+|+|++.. +.+ .|||+.. .. .| .....+|||||
T Consensus 118 ---------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGL 174 (375)
T 1miq_A 118 ---------GTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY---SSVEFDGILGL 174 (375)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH---HHSCCCEEEEC
T ss_pred ---------CcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc---ccCCCceEEeC
Confidence 479999999999 5999999999998754 457 9999998 43 22 13457999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCE
Q 017632 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (368)
Q Consensus 224 g~~~~------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (368)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.++ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99764 589999999999 69999999985 35899999999964 58999996 5689999999 999998
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 017632 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
.+ ....+||||||+++++|++++++|.++++++++
T Consensus 253 ~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 287 (375)
T 1miq_A 253 TM----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV 287 (375)
T ss_dssp EE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC
T ss_pred Ec----------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc
Confidence 76 135699999999999999999999999987543
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.4e-40 Score=326.64 Aligned_cols=211 Identities=20% Similarity=0.335 Sum_probs=182.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+.+|+++|+||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~~------------- 192 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEKD------------- 192 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCcccccC-------------
Confidence 456889999999999999999999999999999999984 4643 489999999999973
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeee----ccCCCCCCCCCCcceeeec
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (368)
++.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++. .++ + .....+|||||
T Consensus 193 ---------~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 193 ---------DTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp ---------EEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred ---------CCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 479999999999 6999999999998753 56 99999988 554 3 23457999999
Q ss_pred CCCC------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCE
Q 017632 224 GKSN------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (368)
Q Consensus 224 g~~~------~s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (368)
|++. .+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ++.+|.|.++ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 9875 3699999999999 69999999986 3589999999996 458999997 6789999999 999988
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
. .....++|||||+++++|++++++|.+++++.+
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~ 361 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVFK 361 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEE
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCee
Confidence 1 124569999999999999999999999887654
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=316.26 Aligned_cols=221 Identities=24% Similarity=0.335 Sum_probs=182.1
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.||||+|+++|+|||||+++||+|..|..|. +.|||++|+|++...
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~~---------------- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSKG---------------- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeCC----------------
Confidence 4567999999999999999999999999999998886653 689999999999853
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (368)
|.|.+.|++|+. .|.+++|+|+|++.... ...+.|++.....+.+. .....+||||||++..
T Consensus 66 ------~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~~ 130 (383)
T 2ewy_A 66 ------FDVTVKYTQGSW-TGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAKP 130 (383)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------ceEEEEECCcEE-EEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhcccc
Confidence 689999999985 99999999999863211 12467888776555442 1346799999998653
Q ss_pred -----cHHHHhhhcCCCCCceEEeecC--------CCCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCE
Q 017632 229 -----SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (368)
Q Consensus 229 -----s~~~~l~~~~~i~~~Fsl~L~~--------~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (368)
+++++|++|+.|+++||+||.+ ....|.|+|||+|+ +++.|+|+. +..+|.|.|++|+|+++
T Consensus 131 ~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 131 SSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQ 209 (383)
T ss_dssp CTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTE
T ss_pred cccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCE
Confidence 5899999999888899999963 14579999999985 568999997 45899999999999999
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 017632 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
.+.++.+.+. ...+||||||++++||++++++|++++.+...
T Consensus 210 ~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 251 (383)
T 2ewy_A 210 SLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL 251 (383)
T ss_dssp ECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC
T ss_pred EccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcc
Confidence 8876544332 46799999999999999999999999998764
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.7e-41 Score=329.72 Aligned_cols=212 Identities=21% Similarity=0.361 Sum_probs=180.3
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+..|+++|.||||+|++.|++||||+++||+|..|. .|. .++.|||++|+|++..
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~-------~~~~ydps~SsT~~~~------------- 193 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCL-------TKHLYDSSKSRTYEKD------------- 193 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGG-------GSCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccC-------CCCcCCCccCCceeEC-------------
Confidence 346789999999999999999999999999999999886 454 4589999999999984
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeecc--CCCCCCCCCCcceeeecCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEALDGIIGFGK 225 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GIlGLg~ 225 (368)
+|.|.+.|++|+ +.|.+++|+|++++.. ++ +.|||++... +... .....+||||||+
T Consensus 194 ---------~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 194 ---------GTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp ---------EEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred ---------CcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 479999999999 5999999999998753 56 9999999876 4321 1245799999998
Q ss_pred CCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 226 ~~~------s~~~~l~~~~~i-~~~Fsl~L~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
+.. +++++|++||+| +++||+||.+. ..+|.|+|||+|+ +++.|+|+. ..++|.|.++ |+|+++ +
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~-~ 329 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI-M 329 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-E
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-E
Confidence 753 589999999999 69999999985 4589999999996 458999996 5689999999 999993 3
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~ 334 (368)
+ ....+||||||+++++|++++++|.+++++.
T Consensus 330 -~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~ 361 (453)
T 2bju_A 330 -L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI 361 (453)
T ss_dssp -E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE
T ss_pred -e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc
Confidence 1 2457999999999999999999999888664
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.9e-39 Score=315.20 Aligned_cols=220 Identities=23% Similarity=0.290 Sum_probs=182.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.||||+|+++|+|||||+++||+|..|..| ++.|||++|+|++...
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~---------~~~y~~~~SsT~~~~~---------------- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL---------HRYYQRQLSSTYRDLR---------------- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC---------SCCCCGGGCTTCEEEE----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc---------cCCcCcccCCCceeCC----------------
Confidence 456899999999999999999999999999999888654 3789999999999853
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (368)
|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|++.....+.|. .....+||||||++.
T Consensus 74 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 74 ------KGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ceEEEEECCcEE-EEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 689999999986 9999999999983 3211 1366787776555442 134679999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEE
Q 017632 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (368)
Q Consensus 228 -----~s~~~~l~~~~~i~~~Fsl~L~~~-----------~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (368)
.+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.|++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 368999999999988999999752 35799999999964 58899997 4689999999999
Q ss_pred ECCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 017632 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
|+++.+.++...+. ...+||||||++++||++++++|+++|.+...
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 262 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 262 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc
Confidence 99998876544332 45799999999999999999999999998864
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=4.1e-39 Score=313.51 Aligned_cols=237 Identities=22% Similarity=0.295 Sum_probs=187.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.||||+|+++|+|||||+++||+|..| |. .++.|||++|+|++..
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~-------~~~~y~~~~SsT~~~~----------------- 79 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF-------LHRYYQRQLSSTYRDL----------------- 79 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT-------CSCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc-------ccCCcCcccCcccccC-----------------
Confidence 346899999999999999999999999999999887 43 2478999999999984
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (368)
.|.|.+.|++|+. .|.+++|+|+|++ ... ...+.|+++....+.+. .....+||||||++.
T Consensus 80 -----~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -----CCEEEEEECcEEE-EEEEEEEEEEECCcccc-------ceeeeEEEEEccccccc--cCCCccceEEcCchhhcc
Confidence 4799999999996 9999999999984 221 11345788777665442 234689999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecC-----------CCCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEE
Q 017632 228 -----SSMISQLASSGGVRKMFAHCLDG-----------INGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (368)
Q Consensus 228 -----~s~~~~l~~~~~i~~~Fsl~L~~-----------~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (368)
.+++++|++|++|+++||+||.+ ....|.|+||++|+. ++.|+|+. +..+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 46999999999998899999964 234799999999964 57899997 5689999999999
Q ss_pred ECCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcccc---cCCcCceeeec
Q 017632 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (368)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~---~~~~~~C~~~~ 353 (368)
|+++.+.++...+ +...+||||||++++||++++++|++++.+.....+... ......|+...
T Consensus 224 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 289 (402)
T 3vf3_A 224 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 289 (402)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETT
T ss_pred ECCEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccc
Confidence 9999887654432 246799999999999999999999999999864211111 11134788754
No 29
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.2e-39 Score=315.01 Aligned_cols=248 Identities=19% Similarity=0.325 Sum_probs=186.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (368)
++.+.+|+++|.|||| |+|||||+++||+|..|. +++.++|.++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 4567899999999998 999999999999986641 23455666666654322222
Q ss_pred CCCCC--------CCCC-cceEEeCCCCeEEEEEEEEEEEEecccCCccccccCce----eeeeeeeeccCCCCCCCCCC
Q 017632 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGS----LIFGCGARQSGNLDSTNEEA 216 (368)
Q Consensus 150 ~~C~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~----~~fg~~~~~~~~~~~~~~~~ 216 (368)
..|.. ++.| .|.+.|++|+.+.|.+++|+|+|++..+.. .+++ +.|||+....... ....
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~----~v~~~~~~~~Fg~~~~~~~~~---~~~~ 136 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK----PVSKVNVGVLAACAPSKLLAS---LPRG 136 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSS----EEEEEEEEEEEEECCGGGGTT---SCTT
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCc----cccceeeeeEeecCcccccCC---CCCC
Confidence 23431 2346 599999999987999999999999753211 1223 4679998752111 1246
Q ss_pred cceeeecCCCCCcHHHHhhhcCCCCCceEEeecCCCCcceEEeCCcCC------CCceeecCCCC--CCceEEEEeEEEE
Q 017632 217 LDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQV 288 (368)
Q Consensus 217 ~~GIlGLg~~~~s~~~~l~~~~~i~~~Fsl~L~~~~~~G~l~fGg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v 288 (368)
.|||||||++..|++.||.++++++++||+||.+. .+|.|+||+++. +++.|+|++.+ ..+|+|.|++|+|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 89999999999999999999987789999999885 689999999874 46899999854 2578899999999
Q ss_pred CCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC-------CCcc--cccCCcCceeeecc
Q 017632 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP-------DLKV--HTVHDEYTCFQYSE 354 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~-------~~~~--~~~~~~~~C~~~~~ 354 (368)
+++.+.++...|. .+++||||||++++||+++|++|.++|.+++. .... .....+..||+.+.
T Consensus 216 g~~~~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 216 GDTRVPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp TTEECCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred cCEEecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 9998876655443 46799999999999999999999999988653 1111 11233468998763
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.3e-40 Score=311.02 Aligned_cols=215 Identities=15% Similarity=0.198 Sum_probs=182.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~--~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~ 147 (368)
++.+..|+++|.|| +|+++|+|||||+++||+|..|. .|.. ..++.|||++| |++..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~------------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISD------------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEE-------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEEC-------------
Confidence 45678999999999 99999999999999999999986 5621 23479999999 99873
Q ss_pred CCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCC
Q 017632 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (368)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (368)
++.|.+.|++|+. .|.+++|+|+|++.. +.++.|||++.....| .....+||||||++.
T Consensus 72 ---------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~ 130 (330)
T 1yg9_A 72 ---------GNVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEV---CILSADVVVGIAAPG 130 (330)
T ss_dssp ---------EEEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHH---HHTTCSEEEECSCTT
T ss_pred ---------CCEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccc---ccccCceEEEcCcch
Confidence 4689999999987 999999999998754 5689999999873323 134579999999987
Q ss_pred Cc-------HHHHhhhcCCCCCceEEeecCC-CC--cceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEe
Q 017632 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (368)
Q Consensus 228 ~s-------~~~~l~~~~~i~~~Fsl~L~~~-~~--~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (368)
.+ ++++|++||+|+++||+||.+. .. .|.|+|||+|+. ++.|+|+. ++.+|.|.|++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 55 9999999998899999999885 22 799999999964 58899997 6789999999999999876
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
. ..+..+||||||+++++|++++++|++++++..
T Consensus 210 ~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 243 (330)
T 1yg9_A 210 A--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV 243 (330)
T ss_dssp E--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE
T ss_pred c--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcc
Confidence 4 124679999999999999999999999997653
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-39 Score=307.14 Aligned_cols=209 Identities=21% Similarity=0.332 Sum_probs=177.0
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+.+|+++|.|| +|+++|+|||||+++||+|..|..|. |..++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSE-----QTGHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHH-----HTTSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccc-----cCCCCCCCchhcC-Ccc------------------
Confidence 578899999999 99999999999999999999998764 2245899999998 443
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (368)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 368999999999977999999999998754 56899999998755332 1245799999998653
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecCC
Q 017632 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (368)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (368)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+..+..+|.|.|++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 478999987 6 6999999987 4689999999985 578999997667899999999999998653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHH
Q 017632 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKI 331 (368)
Q Consensus 298 ~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i 331 (368)
.....+||||||+++++|++++++|++++
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i 234 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQV 234 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTS
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhC
Confidence 23567999999999999999999999887
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=6.9e-39 Score=303.00 Aligned_cols=210 Identities=23% Similarity=0.335 Sum_probs=175.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+.+|+++|.|| +|+++|+|||||+++||+|..|..|. |..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE-----RSGHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH-----HTTCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc-----ccCCCCCCccccC-Ccc------------------
Confidence 577899999999 89999999999999999999998663 2245799999998 553
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (368)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 357999999999977999999999998754 56899999998755331 1235799999998643
Q ss_pred ------cHHHHhhhcCCCCCceEEeecCCCCcceEEeCCcCCC----CceeecCCCCCCceEEEEeEEEECCEEeecCCc
Q 017632 229 ------SMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (368)
Q Consensus 229 ------s~~~~l~~~~~i~~~Fsl~L~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~ 298 (368)
+++++|+++ +-+++||+||.+ +..|.|+|||+|+. ++.|+|+..+..+|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE----
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc----
Confidence 478999987 336999999987 46899999999975 4789999766789999999999999 442
Q ss_pred ccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 017632 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (368)
Q Consensus 299 ~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~ 332 (368)
.....+||||||+++++|++++++|.+++.
T Consensus 206 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ 235 (323)
T 1izd_A 206 ----SDSITGIADTGTTLLLLDDSIVDAYYEQVN 235 (323)
T ss_dssp ----CCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred ----CCCceEEEeCCCcceeCCHHHHHHHHHhCC
Confidence 235679999999999999999999988873
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.1e-38 Score=301.58 Aligned_cols=207 Identities=23% Similarity=0.367 Sum_probs=174.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (368)
.+..|+++|.|| +|+++|+|||||+++||+|..|..|. |..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQ-----QSGHSVYNPSATG-KEL------------------ 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH-----HTTSCCBCHHHHC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchh-----ccCCCCCCcccCC-ccc------------------
Confidence 577899999999 99999999999999999999998664 2245899999988 553
Q ss_pred CCCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 017632 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (368)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (368)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 ----SGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred ----CCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 357999999999977999999999998754 56899999998655432 1245799999998642
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCcCC----CCceeecCCCCCCceEEEEeEEEECCEEeecCC
Q 017632 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (368)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fsl~L~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (368)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+..+.++|.|.|++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 589999987 6 6999999987 4689999999985 57899999766789999999999998 21
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHH
Q 017632 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKI 331 (368)
Q Consensus 298 ~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i 331 (368)
.....+||||||+++++|++++++|++++
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i 233 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQV 233 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTS
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhC
Confidence 12456999999999999999999998887
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-37 Score=296.12 Aligned_cols=200 Identities=24% Similarity=0.403 Sum_probs=170.4
Q ss_pred ceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCCCCCCCCC
Q 017632 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (368)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~~~~~~~C 152 (368)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 568999999999999999999999999999853 4799988876543
Q ss_pred CCCCCCcceEEeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC----
Q 017632 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (368)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 228 (368)
|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ +. ..+||||||++..
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~~-----~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-FD-----GVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-CT-----TCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-Cc-----CCCcEEECCcccccccc
Confidence 79999999998 5999999999998753 56899999998755 31 4799999998643
Q ss_pred ----------cHHHHhhhcCCC-CCceEEeecCC----CCcceEEeCCcCC----CCceeecCCCC---CCceEEEEeEE
Q 017632 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (368)
Q Consensus 229 ----------s~~~~l~~~~~i-~~~Fsl~L~~~----~~~G~l~fGg~d~----~~~~~~p~~~~---~~~w~v~l~~i 286 (368)
+++++|++||+| +++||+||.+. ...|.|+||++|+ +++.|+|+..+ ..+|.|. .+|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 59999999863 3479999999985 57899999864 5789999 999
Q ss_pred EECC-EEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 017632 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (368)
Q Consensus 287 ~v~~-~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~~ 336 (368)
+|++ +.+.. ...+||||||++++||++++++|.+++++++.
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~ 237 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD 237 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc
Confidence 9998 76631 24699999999999999999999999987643
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=5.8e-23 Score=158.70 Aligned_cols=84 Identities=39% Similarity=0.589 Sum_probs=75.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC----CCCCCCCCCccCCcccCCCCCcceeecCCCcccCCCC
Q 017632 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (368)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~C~----~C~~~~~~~~~~~~f~p~~Sst~~~v~c~~~~C~~~~ 145 (368)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|. .++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~-------~~~~y~p~~SsT~~~~----------- 70 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW-------IHHKYNSDKSSTYVKN----------- 70 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH-------TSCCBCGGGCTTCEEE-----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC-------CCCCCCchhCCCceeC-----------
Confidence 356789999999999999999999999999999999886 454 3489999999999984
Q ss_pred CCCCCCCCCCCCCcceEEeCCCCeEEEEEEEEEEEEec
Q 017632 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (368)
Q Consensus 146 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~ 183 (368)
.|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 71 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 -----------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 479999999999 59999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.85 E-value=3.7e-21 Score=173.93 Aligned_cols=132 Identities=19% Similarity=0.274 Sum_probs=110.1
Q ss_pred CceeeeeeeeeccCCCCCCCCCCcceeeecCCCCC------cHHHHhhhcCCC-CCceEEeecCCC-C--cceEEeCCcC
Q 017632 194 NGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHVV 263 (368)
Q Consensus 194 ~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~l~~~~~i-~~~Fsl~L~~~~-~--~G~l~fGg~d 263 (368)
++++.|||++..++.+. .....+||||||++.. +++++|++||+| +++||+||.+.. . .|.|+||++|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56899999998766432 3456899999999753 589999999999 699999998862 2 7999999999
Q ss_pred CC----CceeecCCCCCCceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 017632 264 QP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (368)
Q Consensus 264 ~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~~~ 335 (368)
+. ++.|+|+. +..+|.|.+++|+|+++.+. ......+|+||||+++++|++++++|.++++++.
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 150 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP 150 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee
Confidence 64 58999997 56899999999999987642 1235679999999999999999999999997653
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.50 E-value=0.69 Score=34.67 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=25.1
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 017632 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (368)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~ 106 (368)
=++.+.|| .|.+++++|||.+++-+...+
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 36789999 999999999999999987543
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.71 E-value=0.65 Score=35.16 Aligned_cols=27 Identities=22% Similarity=0.158 Sum_probs=24.4
Q ss_pred eEEEEEEeCCCCceEEEEEECCCCceeEe
Q 017632 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVN 103 (368)
Q Consensus 75 ~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~ 103 (368)
.-++.+.|| .|.+++++|||.+++-+.
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 347889999 999999999999999987
No 39
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=85.16 E-value=1.1 Score=33.58 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.7
Q ss_pred EEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 017632 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (368)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~ 106 (368)
++.+.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 6789999 999999999999999986433
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=84.60 E-value=0.82 Score=36.71 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~ 104 (368)
..+.+++++.|+ ++++++++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 457789999999 8999999999999988864
No 41
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=80.53 E-value=1.4 Score=33.74 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.9
Q ss_pred EEEEEeC---CCCceEEEEEECCCCceeEeCCCC
Q 017632 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (368)
Q Consensus 77 ~~~i~vG---tP~q~~~v~~DTGSs~lWv~~~~C 107 (368)
.++|.|| +|+|.+..++|||.+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5666776 789999999999999999986554
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=78.73 E-value=1.9 Score=33.29 Aligned_cols=27 Identities=26% Similarity=0.154 Sum_probs=23.6
Q ss_pred eEEEEEEeCCCCceEEEEEECCCCceeEeC
Q 017632 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (368)
Q Consensus 75 ~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~ 104 (368)
.=++ +.|| .|.+++++|||.+++-+..
T Consensus 14 rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 14 PEIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp CEEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CCEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 3456 9999 9999999999999998874
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=78.07 E-value=2.3 Score=33.95 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=24.4
Q ss_pred EEECCEEeecCCcccccCCCccEEEcccccccccChHHHHHH
Q 017632 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (368)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i 327 (368)
+.|||+.+. ++||||.+.+.++.+..+.+
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 678888764 99999999999998887654
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.36 E-value=1.9 Score=34.77 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=27.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~ 105 (368)
....|++++.|. .+++++++|||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 345789999999 99999999999999998753
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.35 E-value=1.8 Score=34.97 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=25.0
Q ss_pred EEECCEEeecCCcccccCCCccEEEcccccccccChHHHHHH
Q 017632 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (368)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i 327 (368)
++|||+.+. +++|||.+.+.++.+..+.+
T Consensus 29 ~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 457888765 99999999999999998776
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=75.53 E-value=2.9 Score=32.02 Aligned_cols=29 Identities=14% Similarity=0.173 Sum_probs=25.5
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 017632 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (368)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~ 106 (368)
=.+.+.|| +|.++.++|||.+++-+...+
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 47889999 999999999999999997644
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=70.25 E-value=5.2 Score=31.52 Aligned_cols=33 Identities=15% Similarity=0.029 Sum_probs=27.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 017632 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (368)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~~~ 106 (368)
....-++.+.|+ +|.+.+++|||.+++-+....
T Consensus 19 ~~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 19 PPPEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCCSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred ccCCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 345668899999 999999999999999987543
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=63.89 E-value=5.9 Score=33.62 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeC
Q 017632 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (368)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~ 104 (368)
-.+.+.|| +|.+++++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 47889999 9999999999999998863
No 49
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=63.01 E-value=5.7 Score=29.28 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.3
Q ss_pred EEEcccccccccChHH
Q 017632 308 TIIDSGTTLAYLPEMV 323 (368)
Q Consensus 308 aiiDSGTt~~~lp~~~ 323 (368)
++||||++.+++|...
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (97)
T 1lya_A 30 VVFDTGSSNLWVPSIH 45 (97)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCCceEEeEcC
Confidence 8999999999998753
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=62.84 E-value=7.3 Score=30.29 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.7
Q ss_pred eCCCCceEEEEEECCCCceeEeCCC
Q 017632 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (368)
Q Consensus 82 vGtP~q~~~v~~DTGSs~lWv~~~~ 106 (368)
|| +|.++.++|||.+++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788899999999999998644
No 51
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=45.80 E-value=11 Score=27.92 Aligned_cols=30 Identities=13% Similarity=0.416 Sum_probs=24.4
Q ss_pred eEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccCh
Q 017632 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (368)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~ 321 (368)
|+=++..|+|+|+.+. +++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 4445667999999775 99999999999875
No 52
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=45.53 E-value=12 Score=28.01 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=26.8
Q ss_pred eEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChHHHH
Q 017632 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYE 325 (368)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~ 325 (368)
|+=++-.|+|+|+.+. +++|||.-.+.+......
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccCc
Confidence 4445566899999764 999999999999976653
No 53
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=43.88 E-value=15 Score=28.17 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=26.1
Q ss_pred CceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccCh
Q 017632 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (368)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~ 321 (368)
..|+=++. |+|+|+.+. +++|||.-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 35776777 999999775 99999999999886
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=43.42 E-value=14 Score=27.53 Aligned_cols=30 Identities=7% Similarity=0.166 Sum_probs=24.4
Q ss_pred ceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccC
Q 017632 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (368)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp 320 (368)
.|+=++..|+|+|+.+. +++|||.-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 35556677999999875 9999999999885
No 55
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=43.07 E-value=16 Score=33.24 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=24.9
Q ss_pred ecCCCCCCceEEEEeEEEEC--CEEeecCCcccccCCCccEEEcccccccccChH
Q 017632 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (368)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 322 (368)
+|+......|.++ |.|| .+.+ .+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q~~-------------~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQQQ-------------TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEE-------------EEEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCcEE-------------EEEEeCCCCceEEecC
Confidence 4554445566655 5666 3333 2899999999999854
No 56
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=42.00 E-value=19 Score=32.73 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
++||||++.+|+|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 29 LLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEETTCCCCEECSS
T ss_pred EEEeCCChhheecCC
Confidence 999999999999863
No 57
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=41.34 E-value=17 Score=32.94 Aligned_cols=15 Identities=20% Similarity=0.532 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+|+|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 29 VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEcCCCCCEEEecC
Confidence 999999999999854
No 58
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=41.16 E-value=23 Score=29.94 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.1
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeC
Q 017632 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (368)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~lWv~~ 104 (368)
=.+++.|| +|.++.++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 47889999 8999999999999998853
No 59
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=39.44 E-value=19 Score=32.72 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+|+|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 29 VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCCeEEecC
Confidence 999999999999854
No 60
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=39.44 E-value=25 Score=27.56 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=22.7
Q ss_pred EeEEEECCEEeecCCcccccCCCccEEEcccccccccChHH
Q 017632 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (368)
Q Consensus 283 l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~ 323 (368)
+..++|+|+.+. +++|||...+.|+...
T Consensus 24 ~v~i~I~G~~~~-------------~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 24 RITLKVGGQPVT-------------FLVDTGAQHSVLTQNP 51 (132)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEECSCC
T ss_pred EEEEEECCEEEE-------------EEEeCCCCeEEEcccc
Confidence 445889998765 8999999999998743
No 61
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.30 E-value=24 Score=31.87 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=27.1
Q ss_pred eeecCCCCCCceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChHHH
Q 017632 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (368)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~ 324 (368)
...|+. ....|.+ .|+||.+.+. +++|||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 7 TNTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCCC
Confidence 344543 3455654 4677755543 89999999999997643
No 62
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=36.26 E-value=23 Score=32.08 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999854
No 63
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.91 E-value=26 Score=31.65 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=27.0
Q ss_pred eeecCCCCCCceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChHHH
Q 017632 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (368)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~ 324 (368)
...|+. ....|.+ .|.||.+.+. +++|||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 7 TTNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 344543 3455654 4677755543 89999999999998643
No 64
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=33.94 E-value=25 Score=31.79 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=22.6
Q ss_pred CceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChH
Q 017632 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (368)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 322 (368)
..|.++ |+||.+.+. +++|||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEEE-------------EEEeCCCcceEEecC
Confidence 456654 677755543 899999999999965
No 65
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=33.21 E-value=26 Score=31.59 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=27.2
Q ss_pred eeecCCCCCCceEEEEeEEEECCEEeecCCcccccCCCccEEEcccccccccChHHH
Q 017632 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (368)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~ 324 (368)
.-.|+. ....|.++ |.||.+.+. +++|||++.+++|..-.
T Consensus 6 ~~~~~~-~~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 6 VTTPQN-NDEEYLTP---VTVGKSTLH-------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEECT-TTSCEEEE---EEEBTEEEE-------------EEEETTCCCEEEECTTS
T ss_pred EeEEcC-CCCEEEEE---EEECCEEEE-------------EEEeCCCccceEeeCCC
Confidence 344543 44566654 667755543 89999999999987643
No 66
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=31.26 E-value=31 Score=29.55 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEEcC
Confidence 899999999999864
No 67
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=30.36 E-value=39 Score=30.39 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 29 VLFDTGSSNLWVPSV 43 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEcCCCccEEEecC
Confidence 899999999999875
No 68
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=28.35 E-value=41 Score=30.34 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=14.9
Q ss_pred EEEcccccccccChHHH
Q 017632 308 TIIDSGTTLAYLPEMVY 324 (368)
Q Consensus 308 aiiDSGTt~~~lp~~~~ 324 (368)
+++|||++.+++|..-.
T Consensus 32 v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 32 LDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEETTCCCEEECBTTS
T ss_pred EEEcCCCCCeEEecCCC
Confidence 99999999999997643
No 69
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.66 E-value=43 Score=30.20 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=23.5
Q ss_pred CCCceEEEEeEEEEC--CEEeecCCcccccCCCccEEEcccccccccChHH
Q 017632 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (368)
Q Consensus 275 ~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~~ 323 (368)
....|.+ .|.|| .+.+. +++|||++.+++|..-
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~~-------------v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 13 LDDAYIT---PVQIGTPAQTLN-------------LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp TCCCEEE---EEEETTTTEEEE-------------EEEETTCCCEEECBTT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEECCCCCCeEEecCC
Confidence 4456654 46777 44432 9999999999999753
No 70
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=27.50 E-value=38 Score=30.45 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 32 LDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCCCEEEccC
Confidence 999999999999875
No 71
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=25.68 E-value=51 Score=25.03 Aligned_cols=27 Identities=7% Similarity=0.203 Sum_probs=22.0
Q ss_pred EEeEEEECCEEeecCCcccccCCCccEEEcccccccccCh
Q 017632 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (368)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~ 321 (368)
++..|.++|+.+. +++|||.-.+.+..
T Consensus 10 P~vti~I~Gq~~e-------------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 10 PSLTLWLDDKMFT-------------GLINTGADVTIIKL 36 (114)
T ss_dssp CEEEEEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred CeEEEEECCEEEE-------------EEEccCCCceEEec
Confidence 3456889998775 99999999998865
No 72
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=24.58 E-value=46 Score=29.90 Aligned_cols=15 Identities=27% Similarity=0.665 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+|+|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 30 VILDTGSSNLWVPSN 44 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcCeEEecC
Confidence 899999999999875
No 73
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=24.57 E-value=64 Score=27.36 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.5
Q ss_pred eeEEE---EEEeCCC----CceEEEEEECCCCceeEeCC
Q 017632 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (368)
Q Consensus 74 ~~Y~~---~i~vGtP----~q~~~v~~DTGSs~lWv~~~ 105 (368)
+.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45555 4678752 34578999999999999864
No 74
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=24.56 E-value=46 Score=30.37 Aligned_cols=41 Identities=22% Similarity=0.437 Sum_probs=27.0
Q ss_pred CceeecCCC-CCCceEEEEeEEEEC--CEEeecCCcccccCCCccEEEcccccccccChH
Q 017632 266 EVNKTPLVP-NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (368)
Q Consensus 266 ~~~~~p~~~-~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 322 (368)
....+|+.. ....|.+ .|.|| .+.+. ++||||++.+|+|..
T Consensus 6 ~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAI---PVSIGTPGQDFY-------------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CEEEEEEEETTTTEEEE---EEEETTTTEEEE-------------EEEETTCCCCEEEBT
T ss_pred ccceEEeecCCCCEEEE---EEEECCCCcEEE-------------EEEcCCCCCeEECCC
Confidence 344566642 2345655 46677 44432 899999999999975
No 75
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=22.84 E-value=51 Score=30.52 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
++||||++.+|+|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 38 ILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEECC
Confidence 999999999999864
No 76
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.72 E-value=51 Score=30.65 Aligned_cols=15 Identities=7% Similarity=0.118 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
++||||++.+|+|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 38 VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEETTCSSEEEECS
T ss_pred EEEECCCCceeECCC
Confidence 999999999999864
No 77
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=22.62 E-value=53 Score=29.41 Aligned_cols=15 Identities=20% Similarity=0.656 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 31 v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 31 VLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCccceEEcCC
Confidence 899999999999875
No 78
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=22.18 E-value=63 Score=28.93 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=14.0
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 29 VIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEETTCCCEEECBT
T ss_pred EEEeCCCcceEEecC
Confidence 899999999999975
No 79
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=21.85 E-value=46 Score=25.34 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=21.7
Q ss_pred EEEeEEEEC-----CEEeecCCcccccCCCccEEEcccccccccCh
Q 017632 281 INMTAVQVG-----LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (368)
Q Consensus 281 v~l~~i~v~-----~~~~~~~~~~~~~~~~~~aiiDSGTt~~~lp~ 321 (368)
=++..|+|+ |+.+. +++|||.-.+.++.
T Consensus 10 RPlvtikI~~~~~~Gq~~e-------------aLLDTGADdTVl~~ 42 (116)
T 3liy_A 10 RPVIKAQVDTQTSHPKTIE-------------ALLDTGADMTVIPI 42 (116)
T ss_dssp CCEEEEEEECSSSCCEEEE-------------EEECTTBSSCEEEG
T ss_pred CCeEEEEEccccCCCeEeE-------------EEeccCCCccEEec
Confidence 355667787 66654 99999999999875
No 80
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=21.76 E-value=56 Score=30.06 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
++||||++.+|+|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (383)
T 2ewy_A 30 ILVDTGSSNFAVAGT 44 (383)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEecC
Confidence 999999999999864
No 81
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=21.71 E-value=36 Score=26.32 Aligned_cols=14 Identities=29% Similarity=0.710 Sum_probs=12.5
Q ss_pred EEEcccccccccCh
Q 017632 308 TIIDSGTTLAYLPE 321 (368)
Q Consensus 308 aiiDSGTt~~~lp~ 321 (368)
+++|||.-.+.++.
T Consensus 34 aLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 34 ALLDSGADITIISE 47 (124)
T ss_dssp EEECTTCSSCEEET
T ss_pred EEecCCCCcEEEec
Confidence 89999999998874
No 82
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=21.70 E-value=57 Score=29.06 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+++|..
T Consensus 28 v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 28 VVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEcCC
Confidence 899999999999875
No 83
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=20.94 E-value=59 Score=30.15 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
++||||++.+++|..
T Consensus 45 v~~DTGSs~lWv~~~ 59 (402)
T 3vf3_A 45 ILVDTGSSNFAVGAA 59 (402)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEeCCCCceEEccC
Confidence 999999999999864
No 84
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=20.92 E-value=60 Score=30.13 Aligned_cols=16 Identities=19% Similarity=0.576 Sum_probs=14.5
Q ss_pred EEEcccccccccChHH
Q 017632 308 TIIDSGTTLAYLPEMV 323 (368)
Q Consensus 308 aiiDSGTt~~~lp~~~ 323 (368)
+++|||++.+|+|..-
T Consensus 78 vi~DTGSs~lWV~s~~ 93 (383)
T 2x0b_A 78 VVFDTGSSNVWVPSSK 93 (383)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCCCeEEeccC
Confidence 9999999999999763
No 85
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=20.27 E-value=62 Score=30.89 Aligned_cols=15 Identities=27% Similarity=0.680 Sum_probs=14.0
Q ss_pred EEEcccccccccChH
Q 017632 308 TIIDSGTTLAYLPEM 322 (368)
Q Consensus 308 aiiDSGTt~~~lp~~ 322 (368)
+++|||++.+|+|..
T Consensus 155 vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 155 FILDTGSANLWVPSV 169 (453)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEECCCcceEEecc
Confidence 999999999999875
Done!