Query 017633
Match_columns 368
No_of_seqs 127 out of 1474
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 10:20:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017633.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017633hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 3.4E-58 7.4E-63 396.7 32.1 339 3-367 52-398 (404)
2 COG0001 HemL Glutamate-1-semia 100.0 3.5E-55 7.6E-60 382.0 38.8 363 5-367 65-428 (432)
3 COG0160 GabT 4-aminobutyrate a 100.0 4.4E-53 9.5E-58 376.3 34.6 357 3-368 66-446 (447)
4 PLN02482 glutamate-1-semialdeh 100.0 2.4E-51 5.1E-56 377.4 39.4 365 4-368 110-474 (474)
5 COG0161 BioA Adenosylmethionin 100.0 3.8E-52 8.2E-57 367.7 30.7 360 4-367 55-443 (449)
6 PRK12389 glutamate-1-semialdeh 100.0 3.5E-50 7.5E-55 369.3 40.3 365 4-368 64-428 (428)
7 TIGR00713 hemL glutamate-1-sem 100.0 1.1E-48 2.4E-53 361.4 40.7 365 4-368 59-423 (423)
8 PRK00615 glutamate-1-semialdeh 100.0 2.2E-48 4.8E-53 355.1 38.1 362 4-368 64-429 (433)
9 TIGR03372 putres_am_tran putre 100.0 1.8E-48 3.9E-53 355.7 36.1 341 4-365 86-442 (442)
10 PRK11522 putrescine--2-oxoglut 100.0 4.2E-48 9.2E-53 355.8 36.1 343 4-367 93-451 (459)
11 PRK00062 glutamate-1-semialdeh 100.0 2E-47 4.3E-52 351.5 40.2 365 4-368 61-425 (426)
12 PRK06062 hypothetical protein; 100.0 7.9E-48 1.7E-52 354.5 36.7 364 4-368 64-446 (451)
13 KOG1404 Alanine-glyoxylate ami 100.0 1.4E-47 2.9E-52 323.9 33.4 352 4-361 61-432 (442)
14 PRK05965 hypothetical protein; 100.0 1.6E-47 3.4E-52 353.3 36.6 360 4-367 57-447 (459)
15 PRK07678 aminotransferase; Val 100.0 1.4E-47 3E-52 353.2 35.7 361 4-368 58-450 (451)
16 PRK07482 hypothetical protein; 100.0 2.3E-47 5E-52 352.4 36.4 362 4-367 61-454 (461)
17 PRK07481 hypothetical protein; 100.0 4.7E-47 1E-51 349.5 36.7 362 4-368 53-446 (449)
18 PRK07495 4-aminobutyrate amino 100.0 9.6E-47 2.1E-51 345.1 37.8 348 4-367 51-421 (425)
19 TIGR03246 arg_catab_astC succi 100.0 6.6E-47 1.4E-51 345.8 36.7 340 4-368 46-396 (397)
20 PRK07046 aminotransferase; Val 100.0 3.8E-46 8.3E-51 342.7 39.4 357 4-368 86-451 (453)
21 PRK07030 adenosylmethionine--8 100.0 1E-46 2.2E-51 347.7 35.2 362 4-368 58-447 (466)
22 PRK06058 4-aminobutyrate amino 100.0 2E-46 4.3E-51 345.9 36.9 350 4-368 67-443 (443)
23 PRK06943 adenosylmethionine--8 100.0 1.9E-46 4.1E-51 345.2 35.8 355 4-367 65-446 (453)
24 PLN02760 4-aminobutyrate:pyruv 100.0 2E-46 4.4E-51 347.7 36.2 361 4-367 100-491 (504)
25 PRK07483 hypothetical protein; 100.0 2.6E-46 5.7E-51 343.7 36.3 362 4-367 41-437 (443)
26 PRK04612 argD acetylornithine 100.0 3.4E-46 7.4E-51 339.7 36.7 341 4-367 51-403 (408)
27 TIGR00709 dat 2,4-diaminobutyr 100.0 1.6E-46 3.6E-51 346.0 35.0 360 4-367 50-435 (442)
28 PRK06931 diaminobutyrate--2-ox 100.0 1.7E-46 3.7E-51 346.0 34.5 360 4-367 69-454 (459)
29 PRK06916 adenosylmethionine--8 100.0 3.4E-46 7.4E-51 344.5 35.8 362 4-368 67-456 (460)
30 PRK08117 4-aminobutyrate amino 100.0 6.2E-46 1.4E-50 342.8 37.4 354 4-367 54-429 (433)
31 PRK08593 4-aminobutyrate amino 100.0 5.3E-46 1.1E-50 342.2 36.7 356 4-367 53-429 (445)
32 PRK07986 adenosylmethionine--8 100.0 1.7E-46 3.8E-51 342.6 33.1 350 4-367 54-423 (428)
33 PRK08742 adenosylmethionine--8 100.0 5.8E-46 1.3E-50 342.4 36.3 361 4-367 75-467 (472)
34 PRK06777 4-aminobutyrate amino 100.0 1E-45 2.2E-50 339.0 37.7 354 4-366 51-420 (421)
35 PRK06938 diaminobutyrate--2-ox 100.0 7.2E-46 1.6E-50 341.9 35.6 360 4-367 74-460 (464)
36 PRK12381 bifunctional succinyl 100.0 1E-45 2.2E-50 338.9 35.7 339 4-367 50-399 (406)
37 PRK07480 putative aminotransfe 100.0 1.6E-45 3.4E-50 339.4 37.1 361 4-367 61-448 (456)
38 PRK08360 4-aminobutyrate amino 100.0 1.3E-45 2.8E-50 339.1 36.1 356 4-367 52-426 (443)
39 PRK07036 hypothetical protein; 100.0 1.5E-45 3.2E-50 340.5 36.6 361 4-367 62-452 (466)
40 PRK06917 hypothetical protein; 100.0 1.7E-45 3.6E-50 338.7 36.7 362 4-367 42-437 (447)
41 PRK05639 4-aminobutyrate amino 100.0 1.7E-45 3.7E-50 338.8 36.7 353 4-367 64-443 (457)
42 PRK06105 aminotransferase; Pro 100.0 1.6E-45 3.5E-50 340.0 36.3 361 4-367 59-449 (460)
43 PLN00144 acetylornithine trans 100.0 1.3E-45 2.9E-50 334.3 35.1 337 4-368 26-381 (382)
44 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.4E-45 5.2E-50 337.3 37.2 354 4-366 44-419 (420)
45 PRK06541 hypothetical protein; 100.0 2.2E-45 4.7E-50 338.8 36.9 362 4-367 63-455 (460)
46 PRK09792 4-aminobutyrate trans 100.0 2E-45 4.4E-50 337.0 36.4 347 4-366 51-420 (421)
47 PRK06173 adenosylmethionine--8 100.0 9.4E-46 2E-50 338.3 33.9 350 4-367 55-425 (429)
48 PRK12403 putative aminotransfe 100.0 3.1E-45 6.7E-50 338.1 37.2 362 4-367 65-452 (460)
49 PRK06082 4-aminobutyrate amino 100.0 2.5E-45 5.4E-50 338.3 36.5 354 4-367 82-451 (459)
50 PRK05769 4-aminobutyrate amino 100.0 2.5E-45 5.4E-50 337.4 35.7 353 4-368 65-440 (441)
51 PRK05964 adenosylmethionine--8 100.0 2.9E-45 6.2E-50 337.4 36.0 349 4-368 53-423 (423)
52 PRK13360 omega amino acid--pyr 100.0 8E-45 1.7E-49 333.7 36.5 356 4-368 57-441 (442)
53 PRK01278 argD acetylornithine 100.0 7.8E-45 1.7E-49 332.6 35.0 336 4-368 42-389 (389)
54 PRK06918 4-aminobutyrate amino 100.0 1.1E-44 2.3E-49 335.4 36.2 356 4-367 65-443 (451)
55 PRK05093 argD bifunctional N-s 100.0 1.3E-44 2.9E-49 332.0 36.2 340 4-368 51-401 (403)
56 TIGR02407 ectoine_ectB diamino 100.0 8.8E-45 1.9E-49 331.9 34.5 340 4-367 46-412 (412)
57 PRK06148 hypothetical protein; 100.0 1.5E-44 3.3E-49 360.2 37.6 358 4-368 633-1011(1013)
58 PRK09221 beta alanine--pyruvat 100.0 2.3E-44 5E-49 331.0 35.5 356 4-368 60-444 (445)
59 KOG1401 Acetylornithine aminot 100.0 2.8E-44 6.1E-49 306.1 32.1 353 4-368 67-431 (433)
60 PRK04013 argD acetylornithine/ 100.0 1.6E-44 3.4E-49 322.6 31.9 322 4-367 35-360 (364)
61 PRK03715 argD acetylornithine 100.0 2.8E-44 6E-49 326.5 34.1 334 4-368 47-394 (395)
62 PRK05630 adenosylmethionine--8 100.0 2E-44 4.4E-49 329.1 33.2 347 4-367 51-420 (422)
63 PRK09264 diaminobutyrate--2-ox 100.0 2.8E-44 6.1E-49 330.2 34.2 340 4-367 50-416 (425)
64 KOG1402 Ornithine aminotransfe 100.0 6.1E-45 1.3E-49 300.7 26.2 342 3-366 69-426 (427)
65 PLN02624 ornithine-delta-amino 100.0 2.6E-43 5.6E-48 326.9 37.3 343 4-366 86-443 (474)
66 PRK04073 rocD ornithine--oxo-a 100.0 1.5E-43 3.2E-48 324.3 34.1 331 4-365 51-395 (396)
67 PRK03244 argD acetylornithine 100.0 4.6E-43 9.9E-48 322.0 35.2 335 4-368 54-395 (398)
68 PRK06149 hypothetical protein; 100.0 4.8E-43 1E-47 349.6 37.3 357 4-367 594-970 (972)
69 PRK08297 L-lysine aminotransfe 100.0 5.6E-43 1.2E-47 321.7 33.6 348 4-368 56-442 (443)
70 PRK02936 argD acetylornithine 100.0 2.5E-42 5.5E-47 315.0 34.8 333 4-365 40-377 (377)
71 cd00610 OAT_like Acetyl ornith 100.0 3.8E-42 8.3E-47 318.2 36.1 349 4-365 47-413 (413)
72 TIGR00699 GABAtrns_euk 4-amino 100.0 2.5E-42 5.4E-47 315.6 33.6 342 3-365 68-464 (464)
73 TIGR00508 bioA adenosylmethion 100.0 4.4E-42 9.5E-47 315.0 33.7 350 4-367 56-426 (427)
74 PRK02627 acetylornithine amino 100.0 4.3E-41 9.4E-46 309.3 34.6 335 4-367 50-394 (396)
75 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.5E-41 7.6E-46 309.7 33.4 342 4-363 49-430 (431)
76 PF00202 Aminotran_3: Aminotra 100.0 4.4E-42 9.6E-47 306.1 26.1 290 4-303 27-338 (339)
77 TIGR01885 Orn_aminotrans ornit 100.0 1E-40 2.2E-45 306.3 35.7 339 5-366 49-401 (401)
78 PRK08088 4-aminobutyrate amino 100.0 3.4E-40 7.3E-45 304.0 37.9 356 4-367 52-423 (425)
79 PRK00854 rocD ornithine--oxo-a 100.0 1.3E-40 2.8E-45 306.1 35.0 335 4-366 52-400 (401)
80 PRK06209 glutamate-1-semialdeh 100.0 3E-40 6.5E-45 303.5 36.3 340 4-367 59-405 (431)
81 PTZ00125 ornithine aminotransf 100.0 2.6E-40 5.6E-45 304.3 35.6 341 4-368 42-396 (400)
82 PLN02974 adenosylmethionine-8- 100.0 3E-40 6.6E-45 318.1 37.1 357 4-365 376-816 (817)
83 PRK04260 acetylornithine amino 100.0 4.6E-39 9.9E-44 292.9 34.0 331 4-365 40-375 (375)
84 TIGR00707 argD acetylornithine 100.0 4.4E-38 9.5E-43 287.8 33.2 332 4-365 38-379 (379)
85 KOG1403 Predicted alanine-glyo 100.0 1.8E-37 3.8E-42 253.7 24.3 354 7-366 59-436 (452)
86 COG0436 Aspartate/tyrosine/aro 100.0 4.3E-34 9.4E-39 258.3 26.1 326 4-367 30-391 (393)
87 KOG1405 4-aminobutyrate aminot 100.0 8.5E-32 1.8E-36 225.0 23.2 344 3-368 86-484 (484)
88 PLN02822 serine palmitoyltrans 100.0 2.2E-30 4.7E-35 240.9 27.4 322 4-367 117-477 (481)
89 COG1168 MalY Bifunctional PLP- 100.0 6.2E-30 1.3E-34 217.7 23.8 324 10-367 39-386 (388)
90 PRK07324 transaminase; Validat 100.0 5.7E-30 1.2E-34 232.6 25.1 319 11-367 41-370 (373)
91 PLN00175 aminotransferase fami 100.0 2.1E-29 4.5E-34 231.6 28.6 321 11-367 69-413 (413)
92 PRK07682 hypothetical protein; 100.0 1.7E-29 3.8E-34 230.6 26.8 320 11-368 35-377 (378)
93 PLN02955 8-amino-7-oxononanoat 100.0 6E-29 1.3E-33 225.0 29.5 318 2-366 108-460 (476)
94 KOG0257 Kynurenine aminotransf 100.0 1.2E-29 2.5E-34 218.2 23.4 329 13-363 48-415 (420)
95 TIGR01821 5aminolev_synth 5-am 100.0 1E-28 2.2E-33 227.2 30.7 319 2-367 51-396 (402)
96 PRK07681 aspartate aminotransf 100.0 3E-29 6.4E-34 230.4 27.0 318 10-364 46-385 (399)
97 COG0156 BioF 7-keto-8-aminopel 100.0 1.1E-28 2.3E-33 218.5 28.8 315 2-364 45-387 (388)
98 PRK06225 aspartate aminotransf 100.0 1.3E-28 2.7E-33 225.0 29.8 323 9-368 41-377 (380)
99 PRK13393 5-aminolevulinate syn 100.0 1.3E-28 2.8E-33 226.6 28.7 319 2-367 51-396 (406)
100 PRK09064 5-aminolevulinate syn 100.0 1.5E-28 3.2E-33 226.6 28.6 318 3-367 53-397 (407)
101 PLN02187 rooty/superroot1 100.0 1.2E-28 2.5E-33 228.9 26.8 336 3-367 67-438 (462)
102 PRK06290 aspartate aminotransf 100.0 2E-28 4.3E-33 224.5 27.9 328 10-368 58-406 (410)
103 PRK06207 aspartate aminotransf 100.0 3.4E-28 7.4E-33 223.3 29.2 325 10-367 54-402 (405)
104 COG0079 HisC Histidinol-phosph 100.0 1.6E-28 3.4E-33 218.3 25.4 315 5-367 32-354 (356)
105 PRK15481 transcriptional regul 100.0 2.5E-28 5.3E-33 226.4 26.2 313 12-367 101-431 (431)
106 PRK08068 transaminase; Reviewe 100.0 4.2E-28 9.2E-33 222.1 27.4 322 6-364 42-386 (389)
107 PLN03227 serine palmitoyltrans 100.0 6.1E-28 1.3E-32 219.8 28.1 327 2-367 4-382 (392)
108 PRK01533 histidinol-phosphate 100.0 1.4E-28 3E-33 222.5 23.6 309 5-366 39-354 (366)
109 PRK06108 aspartate aminotransf 100.0 9.3E-28 2E-32 219.9 28.7 321 10-367 38-382 (382)
110 PRK07366 succinyldiaminopimela 100.0 7.4E-28 1.6E-32 220.6 27.4 321 10-365 44-388 (388)
111 PRK08960 hypothetical protein; 100.0 8.2E-28 1.8E-32 220.1 27.6 322 10-366 46-386 (387)
112 PRK06348 aspartate aminotransf 100.0 1.1E-27 2.4E-32 218.9 28.1 314 11-364 44-382 (384)
113 PRK08153 histidinol-phosphate 100.0 7.5E-28 1.6E-32 218.6 25.3 312 10-367 46-365 (369)
114 PRK07505 hypothetical protein; 100.0 2.1E-27 4.6E-32 218.2 28.5 315 3-367 53-399 (402)
115 PRK03317 histidinol-phosphate 100.0 1.7E-27 3.6E-32 216.7 27.2 308 10-366 40-363 (368)
116 PRK09276 LL-diaminopimelate am 100.0 1.5E-27 3.2E-32 218.5 26.9 317 10-363 45-384 (385)
117 PRK07309 aromatic amino acid a 100.0 3.4E-27 7.4E-32 216.1 29.3 322 11-367 45-388 (391)
118 PRK13355 bifunctional HTH-doma 100.0 7.8E-28 1.7E-32 227.3 25.5 324 10-367 163-514 (517)
119 PRK12414 putative aminotransfe 100.0 2.8E-27 6E-32 216.2 27.8 313 10-363 43-383 (384)
120 PRK07683 aminotransferase A; V 100.0 2.9E-27 6.4E-32 216.2 28.0 320 11-367 43-383 (387)
121 TIGR03537 DapC succinyldiamino 100.0 3.4E-27 7.3E-32 213.1 28.0 317 10-363 14-349 (350)
122 PRK05957 aspartate aminotransf 100.0 7.9E-27 1.7E-31 213.5 29.9 319 10-367 41-385 (389)
123 PRK08361 aspartate aminotransf 100.0 3.2E-27 6.9E-32 216.5 27.4 324 11-368 48-391 (391)
124 PRK08636 aspartate aminotransf 100.0 4.5E-27 9.8E-32 216.1 28.4 327 10-367 47-400 (403)
125 TIGR03540 DapC_direct LL-diami 100.0 2.9E-27 6.4E-32 216.3 27.1 317 10-363 43-382 (383)
126 PRK08912 hypothetical protein; 100.0 3.3E-27 7.2E-32 216.2 27.2 323 10-367 40-386 (387)
127 PRK02610 histidinol-phosphate 100.0 2E-27 4.4E-32 216.3 25.4 318 10-368 42-372 (374)
128 PRK09147 succinyldiaminopimela 100.0 3.6E-27 7.8E-32 216.5 27.1 313 10-366 43-395 (396)
129 PRK09148 aminotransferase; Val 100.0 4.7E-27 1E-31 215.9 27.8 323 11-367 45-390 (405)
130 PRK05942 aspartate aminotransf 100.0 4.8E-27 1E-31 215.4 27.6 318 10-364 49-389 (394)
131 COG1167 ARO8 Transcriptional r 100.0 7.3E-27 1.6E-31 216.1 28.5 316 13-367 108-455 (459)
132 PLN00145 tyrosine/nicotianamin 100.0 4E-27 8.8E-32 217.2 26.8 333 3-367 53-424 (430)
133 PRK14809 histidinol-phosphate 100.0 3.5E-27 7.5E-32 213.7 25.8 305 10-366 44-356 (357)
134 PRK13392 5-aminolevulinate syn 100.0 5.8E-27 1.2E-31 216.0 27.7 317 3-367 53-397 (410)
135 PRK08363 alanine aminotransfer 100.0 5.3E-27 1.2E-31 215.5 27.3 326 10-367 47-394 (398)
136 PRK05764 aspartate aminotransf 100.0 7.7E-27 1.7E-31 214.5 28.1 326 10-367 45-391 (393)
137 PLN02656 tyrosine transaminase 100.0 1E-26 2.2E-31 213.9 28.8 326 10-367 49-403 (409)
138 TIGR01264 tyr_amTase_E tyrosin 100.0 4.5E-27 9.8E-32 216.2 26.3 327 10-368 49-400 (401)
139 PRK07777 aminotransferase; Val 100.0 1.2E-26 2.6E-31 212.5 29.0 321 11-366 39-385 (387)
140 PRK03158 histidinol-phosphate 100.0 3.4E-27 7.4E-32 214.1 25.0 309 5-364 39-358 (359)
141 PLN00143 tyrosine/nicotianamin 100.0 8.7E-27 1.9E-31 214.3 27.8 326 10-367 50-404 (409)
142 PRK08175 aminotransferase; Val 100.0 1.4E-26 3.1E-31 212.4 28.6 329 5-367 38-389 (395)
143 PTZ00433 tyrosine aminotransfe 100.0 9.1E-27 2E-31 214.6 27.3 324 11-367 52-408 (412)
144 PRK14807 histidinol-phosphate 100.0 2.4E-26 5.3E-31 207.5 29.3 307 10-365 36-350 (351)
145 PRK09082 methionine aminotrans 100.0 4.2E-27 9E-32 215.2 24.6 318 10-363 44-385 (386)
146 PRK06855 aminotransferase; Val 100.0 4.1E-27 8.8E-32 217.7 24.3 336 10-367 49-429 (433)
147 TIGR03538 DapC_gpp succinyldia 100.0 1.3E-26 2.9E-31 212.5 27.3 309 10-364 42-392 (393)
148 PLN03026 histidinol-phosphate 100.0 1.6E-26 3.5E-31 210.4 26.6 309 6-364 63-379 (380)
149 PRK06107 aspartate aminotransf 100.0 2.6E-26 5.7E-31 211.0 28.2 330 10-368 47-401 (402)
150 PRK07337 aminotransferase; Val 100.0 2.6E-26 5.7E-31 210.3 27.2 325 10-365 44-387 (388)
151 PRK02731 histidinol-phosphate 100.0 1.9E-26 4.1E-31 209.9 25.8 314 5-367 42-366 (367)
152 PRK00950 histidinol-phosphate 100.0 1.7E-26 3.8E-31 209.8 24.6 308 5-366 44-361 (361)
153 PRK08056 threonine-phosphate d 100.0 2.4E-26 5.1E-31 208.0 25.0 313 5-366 30-354 (356)
154 PLN02483 serine palmitoyltrans 100.0 1.3E-25 2.7E-30 209.5 30.3 319 1-367 105-466 (489)
155 PTZ00377 alanine aminotransfer 100.0 2.1E-26 4.5E-31 215.9 25.0 334 13-367 92-475 (481)
156 TIGR03576 pyridox_MJ0158 pyrid 100.0 4.2E-26 9.1E-31 203.8 25.1 304 4-365 27-345 (346)
157 PRK09265 aminotransferase AlaT 100.0 4.9E-26 1.1E-30 209.4 26.2 322 10-367 50-401 (404)
158 PRK07179 hypothetical protein; 100.0 2.4E-25 5.1E-30 205.1 30.7 312 3-367 61-398 (407)
159 TIGR01265 tyr_nico_aTase tyros 100.0 3.2E-26 6.9E-31 210.5 24.8 326 10-367 49-401 (403)
160 PRK07550 hypothetical protein; 100.0 6.5E-26 1.4E-30 207.6 26.6 315 11-364 44-384 (386)
161 PRK09105 putative aminotransfe 100.0 3.9E-26 8.4E-31 207.0 24.7 305 10-366 57-369 (370)
162 TIGR01822 2am3keto_CoA 2-amino 100.0 2E-25 4.4E-30 205.1 29.7 317 3-367 45-389 (393)
163 PRK04870 histidinol-phosphate 100.0 5.4E-26 1.2E-30 206.0 25.4 306 10-365 40-356 (356)
164 PRK07590 L,L-diaminopimelate a 100.0 4.3E-26 9.3E-31 210.1 24.9 327 10-365 48-409 (409)
165 PRK07865 N-succinyldiaminopime 100.0 3.2E-26 6.9E-31 208.0 23.5 300 10-362 41-363 (364)
166 PRK06358 threonine-phosphate d 100.0 9E-26 1.9E-30 203.8 26.1 306 10-365 33-353 (354)
167 PRK05958 8-amino-7-oxononanoat 99.9 2.8E-25 6.1E-30 203.8 29.6 312 5-365 48-385 (385)
168 PRK06939 2-amino-3-ketobutyrat 99.9 2.7E-25 5.9E-30 204.7 29.3 315 5-367 51-393 (397)
169 PRK05839 hypothetical protein; 99.9 7.9E-26 1.7E-30 205.7 25.4 309 10-366 38-373 (374)
170 PRK05664 threonine-phosphate d 99.9 5.1E-26 1.1E-30 203.4 23.6 274 36-367 52-328 (330)
171 PRK05387 histidinol-phosphate 99.9 8E-26 1.7E-30 204.8 25.0 307 10-366 38-352 (353)
172 PLN02450 1-aminocyclopropane-1 99.9 1.2E-25 2.6E-30 209.1 25.9 305 33-367 86-430 (468)
173 PRK07568 aspartate aminotransf 99.9 1.6E-25 3.6E-30 205.9 26.6 318 11-367 45-392 (397)
174 PTZ00376 aspartate aminotransf 99.9 3E-26 6.6E-31 210.6 21.7 302 29-367 68-403 (404)
175 TIGR01141 hisC histidinol-phos 99.9 1.3E-25 2.7E-30 202.9 25.3 302 10-362 33-346 (346)
176 PRK06425 histidinol-phosphate 99.9 4.5E-26 9.9E-31 204.0 22.2 279 30-365 37-331 (332)
177 PRK06836 aspartate aminotransf 99.9 1.5E-25 3.2E-30 205.5 25.6 318 10-368 47-392 (394)
178 PLN02672 methionine S-methyltr 99.9 2.5E-25 5.5E-30 218.0 28.5 333 10-366 711-1079(1082)
179 TIGR00858 bioF 8-amino-7-oxono 99.9 5.1E-25 1.1E-29 200.3 28.8 311 4-362 24-360 (360)
180 PRK09440 avtA valine--pyruvate 99.9 1.1E-25 2.4E-30 208.2 24.6 300 33-367 74-411 (416)
181 PLN02376 1-aminocyclopropane-1 99.9 3E-25 6.6E-30 207.1 27.0 304 34-366 95-437 (496)
182 PRK05166 histidinol-phosphate 99.9 2.5E-25 5.3E-30 202.5 25.0 312 5-366 46-370 (371)
183 TIGR03539 DapC_actino succinyl 99.9 1.8E-25 3.9E-30 202.3 23.1 299 10-361 35-356 (357)
184 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.3E-24 4.9E-29 197.7 30.5 314 5-367 42-381 (385)
185 TIGR03542 DAPAT_plant LL-diami 99.9 1.8E-25 3.8E-30 205.5 22.9 319 10-365 47-402 (402)
186 PLN02607 1-aminocyclopropane-1 99.9 9.7E-25 2.1E-29 201.5 27.6 304 34-367 96-437 (447)
187 PRK03321 putative aminotransfe 99.9 5E-25 1.1E-29 199.4 25.2 307 10-367 36-351 (352)
188 PF00155 Aminotran_1_2: Aminot 99.9 1.7E-25 3.7E-30 203.6 21.9 318 10-361 16-363 (363)
189 PRK07392 threonine-phosphate d 99.9 8.6E-25 1.9E-29 198.2 26.3 313 5-366 32-358 (360)
190 KOG0259 Tyrosine aminotransfer 99.9 8.6E-25 1.9E-29 185.2 23.9 329 3-367 62-433 (447)
191 PRK06959 putative threonine-ph 99.9 1.5E-25 3.4E-30 200.7 20.6 278 30-367 51-333 (339)
192 PRK03967 histidinol-phosphate 99.9 9E-25 2E-29 196.0 25.5 297 10-367 32-334 (337)
193 PLN02231 alanine transaminase 99.9 1.1E-24 2.3E-29 204.5 26.9 334 11-367 142-527 (534)
194 PRK14808 histidinol-phosphate 99.9 2E-25 4.2E-30 199.9 20.6 296 10-364 33-334 (335)
195 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.3E-25 2.8E-30 200.9 19.2 275 31-361 45-329 (330)
196 PRK09257 aromatic amino acid a 99.9 4E-25 8.7E-30 202.9 21.8 313 12-365 47-396 (396)
197 PRK01688 histidinol-phosphate 99.9 2.4E-25 5.3E-30 200.8 19.3 289 29-362 53-351 (351)
198 PRK08637 hypothetical protein; 99.9 2.2E-24 4.7E-29 197.4 25.4 322 13-368 20-387 (388)
199 PRK04781 histidinol-phosphate 99.9 1.5E-24 3.2E-29 196.5 23.7 292 31-366 57-362 (364)
200 PRK09275 aspartate aminotransf 99.9 1.2E-24 2.6E-29 201.4 22.7 334 11-367 114-517 (527)
201 PLN02397 aspartate transaminas 99.9 1.4E-24 3.1E-29 200.0 21.9 300 29-366 87-420 (423)
202 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.2E-23 4.8E-28 189.2 28.5 295 33-365 31-355 (355)
203 TIGR03801 asp_4_decarbox aspar 99.9 6.9E-24 1.5E-28 196.1 24.5 343 8-367 105-516 (521)
204 cd06454 KBL_like KBL_like; thi 99.9 3.6E-23 7.9E-28 187.3 28.5 315 3-364 8-348 (349)
205 PRK08354 putative aminotransfe 99.9 1.6E-23 3.4E-28 186.0 25.5 283 10-364 21-309 (311)
206 KOG1360 5-aminolevulinate synt 99.9 1E-22 2.2E-27 173.5 28.1 319 4-368 179-525 (570)
207 PRK05937 8-amino-7-oxononanoat 99.9 9.7E-23 2.1E-27 185.2 30.0 308 2-367 10-350 (370)
208 cd00609 AAT_like Aspartate ami 99.9 2.2E-23 4.7E-28 188.8 25.2 314 10-362 12-349 (350)
209 PRK07908 hypothetical protein; 99.9 3.6E-23 7.8E-28 186.9 25.8 301 10-366 36-346 (349)
210 TIGR03392 FeS_syn_CsdA cystein 99.9 1.6E-22 3.5E-27 186.0 30.3 320 7-367 25-395 (398)
211 PRK04635 histidinol-phosphate 99.9 1.7E-23 3.6E-28 189.3 20.9 286 30-364 57-352 (354)
212 PLN02721 threonine aldolase 99.9 2.2E-22 4.7E-27 182.5 28.2 321 9-367 17-352 (353)
213 TIGR02326 transamin_PhnW 2-ami 99.9 2.4E-22 5.1E-27 182.7 28.4 323 6-366 6-361 (363)
214 PRK10874 cysteine sulfinate de 99.9 4.8E-22 1E-26 183.1 30.1 320 7-367 28-398 (401)
215 cd06451 AGAT_like Alanine-glyo 99.9 2.7E-22 6E-27 182.0 26.1 312 11-366 11-356 (356)
216 PRK13479 2-aminoethylphosphona 99.9 4.9E-22 1.1E-26 181.0 27.6 328 6-367 8-363 (368)
217 PRK13238 tnaA tryptophanase/L- 99.9 1E-21 2.2E-26 181.4 29.8 336 13-366 58-432 (460)
218 KOG1359 Glycine C-acetyltransf 99.9 4.3E-22 9.3E-27 163.2 24.0 313 3-366 74-411 (417)
219 PRK10534 L-threonine aldolase; 99.9 2.2E-22 4.7E-27 180.9 24.5 316 2-366 5-332 (333)
220 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 7.6E-22 1.7E-26 179.3 28.1 304 33-367 51-368 (370)
221 PLN02368 alanine transaminase 99.9 4.4E-23 9.5E-28 188.1 19.0 206 31-256 105-340 (407)
222 cd06502 TA_like Low-specificit 99.9 4.7E-22 1E-26 179.2 25.3 318 2-363 3-337 (338)
223 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.5E-21 3.3E-26 178.3 28.8 329 5-367 27-381 (387)
224 PRK13520 L-tyrosine decarboxyl 99.9 1.3E-21 2.9E-26 178.5 28.4 316 8-367 30-371 (371)
225 COG0520 csdA Selenocysteine ly 99.9 2.7E-21 5.9E-26 174.8 29.7 316 10-366 34-404 (405)
226 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.6E-21 5.6E-26 178.2 29.5 314 9-361 28-397 (397)
227 cd00613 GDC-P Glycine cleavage 99.9 6.1E-22 1.3E-26 182.4 25.2 316 5-361 28-398 (398)
228 PLN02409 serine--glyoxylate am 99.9 1.5E-21 3.2E-26 179.0 26.2 322 6-367 12-372 (401)
229 cd06453 SufS_like Cysteine des 99.9 5.9E-21 1.3E-25 174.4 29.2 315 5-361 6-373 (373)
230 TIGR01979 sufS cysteine desulf 99.9 1.1E-20 2.3E-25 174.4 30.8 321 7-367 27-401 (403)
231 PRK09295 bifunctional cysteine 99.9 1.2E-20 2.7E-25 173.9 30.6 320 8-366 33-403 (406)
232 PRK02948 cysteine desulfurase; 99.9 4.8E-21 1E-25 175.3 27.3 321 6-367 8-374 (381)
233 COG1104 NifS Cysteine sulfinat 99.9 5.1E-21 1.1E-25 166.8 23.8 317 9-367 12-377 (386)
234 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.5E-20 3.2E-25 170.7 28.0 327 7-365 10-360 (361)
235 KOG0256 1-aminocyclopropane-1- 99.9 2.1E-21 4.6E-26 166.2 20.8 304 33-366 125-460 (471)
236 KOG1368 Threonine aldolase [Am 99.9 1.8E-21 3.8E-26 160.0 19.5 319 10-364 34-365 (384)
237 TIGR03402 FeS_nifS cysteine de 99.9 1.3E-20 2.9E-25 172.2 27.4 319 7-367 8-372 (379)
238 PLN02855 Bifunctional selenocy 99.9 5.2E-20 1.1E-24 170.6 29.5 318 8-367 42-418 (424)
239 COG0075 Serine-pyruvate aminot 99.9 9.1E-20 2E-24 160.3 27.1 319 10-368 16-364 (383)
240 COG2008 GLY1 Threonine aldolas 99.9 4.4E-20 9.6E-25 157.5 23.0 320 9-365 11-341 (342)
241 cd00378 SHMT Serine-glycine hy 99.9 1.5E-19 3.3E-24 166.6 28.3 312 10-366 31-384 (402)
242 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.9E-19 4.1E-24 164.5 27.8 312 10-363 32-372 (373)
243 TIGR01437 selA_rel uncharacter 99.9 2.4E-19 5.3E-24 161.9 28.1 314 2-365 15-363 (363)
244 TIGR02379 ECA_wecE TDP-4-keto- 99.9 8.6E-20 1.9E-24 165.2 24.4 309 12-365 11-375 (376)
245 cd00617 Tnase_like Tryptophana 99.9 2.2E-19 4.9E-24 163.6 26.4 331 13-366 33-407 (431)
246 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.9E-19 8.5E-24 162.6 28.2 309 10-363 12-375 (376)
247 TIGR01814 kynureninase kynuren 99.9 4.7E-19 1E-23 163.2 28.2 323 5-365 34-405 (406)
248 TIGR03403 nifS_epsilon cystein 99.9 2.9E-19 6.2E-24 163.6 25.4 316 9-367 10-375 (382)
249 KOG0634 Aromatic amino acid am 99.9 8.8E-19 1.9E-23 151.5 26.3 307 31-367 98-466 (472)
250 PLN02242 methionine gamma-lyas 99.9 9.1E-20 2E-24 166.8 20.7 222 30-281 73-297 (418)
251 COG0399 WecE Predicted pyridox 99.8 4.1E-19 8.8E-24 156.5 23.3 308 13-367 16-373 (374)
252 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 4.7E-19 1E-23 161.2 24.4 309 12-365 11-374 (375)
253 PRK00011 glyA serine hydroxyme 99.8 2.7E-18 5.9E-23 158.9 29.8 312 10-366 37-388 (416)
254 PRK06767 methionine gamma-lyas 99.8 6.5E-20 1.4E-24 167.0 18.5 289 30-367 58-385 (386)
255 TIGR02006 IscS cysteine desulf 99.8 1.4E-18 3E-23 159.9 26.8 249 9-285 14-282 (402)
256 cd00614 CGS_like CGS_like: Cys 99.8 5.2E-20 1.1E-24 167.0 16.4 216 30-281 37-257 (369)
257 PRK06234 methionine gamma-lyas 99.8 1.1E-19 2.5E-24 165.9 18.3 294 30-367 61-397 (400)
258 PRK13034 serine hydroxymethylt 99.8 5.3E-18 1.1E-22 155.8 29.2 312 11-366 41-391 (416)
259 PRK08247 cystathionine gamma-s 99.8 2E-19 4.4E-24 162.7 18.1 233 30-302 49-287 (366)
260 COG3977 Alanine-alpha-ketoisov 99.8 5.2E-18 1.1E-22 139.9 23.6 333 4-367 32-411 (417)
261 PF00266 Aminotran_5: Aminotra 99.8 3.3E-18 7.1E-23 156.0 25.0 309 7-357 8-371 (371)
262 PRK06460 hypothetical protein; 99.8 3.3E-19 7.3E-24 161.5 17.2 218 30-281 42-261 (376)
263 PRK07504 O-succinylhomoserine 99.8 3.4E-19 7.4E-24 162.6 17.4 217 30-280 62-281 (398)
264 PRK07810 O-succinylhomoserine 99.8 5.7E-19 1.2E-23 161.1 18.5 217 30-280 67-286 (403)
265 PRK08133 O-succinylhomoserine 99.8 4.8E-19 1E-23 161.3 17.7 217 31-281 59-277 (390)
266 cd06450 DOPA_deC_like DOPA dec 99.8 3.9E-18 8.5E-23 154.1 23.6 276 32-363 37-344 (345)
267 PRK08249 cystathionine gamma-s 99.8 7.5E-19 1.6E-23 160.0 18.9 217 30-280 61-279 (398)
268 TIGR02080 O_succ_thio_ly O-suc 99.8 1E-18 2.2E-23 158.5 18.7 217 29-280 47-267 (382)
269 PLN02651 cysteine desulfurase 99.8 2.9E-18 6.3E-23 155.8 21.6 247 7-282 8-275 (364)
270 TIGR01328 met_gam_lyase methio 99.8 9.3E-19 2E-23 159.3 18.2 220 30-281 56-277 (391)
271 PRK14012 cysteine desulfurase; 99.8 8.2E-18 1.8E-22 155.0 24.2 191 8-225 13-222 (404)
272 TIGR03235 DNA_S_dndA cysteine 99.8 1.1E-17 2.4E-22 151.5 24.3 287 6-339 6-322 (353)
273 PRK07049 methionine gamma-lyas 99.8 5E-18 1.1E-22 156.0 22.0 218 30-281 80-311 (427)
274 PRK08045 cystathionine gamma-s 99.8 5.6E-18 1.2E-22 153.7 21.8 218 29-280 48-268 (386)
275 TIGR01325 O_suc_HS_sulf O-succ 99.8 9.9E-19 2.2E-23 158.9 17.0 215 30-280 51-269 (380)
276 PRK08776 cystathionine gamma-s 99.8 2E-18 4.2E-23 157.5 18.8 218 30-281 57-277 (405)
277 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.2E-17 4.8E-22 150.3 25.1 310 12-366 14-378 (379)
278 PF01041 DegT_DnrJ_EryC1: DegT 99.8 8.6E-18 1.9E-22 152.3 21.9 307 12-362 5-363 (363)
279 TIGR01324 cysta_beta_ly_B cyst 99.8 2.9E-18 6.2E-23 155.0 18.4 290 32-367 49-376 (377)
280 KOG0633 Histidinol phosphate a 99.8 4.9E-18 1.1E-22 137.3 17.5 287 37-365 73-375 (375)
281 PRK07503 methionine gamma-lyas 99.8 4.1E-18 8.8E-23 155.8 19.0 219 30-280 62-282 (403)
282 PRK05968 hypothetical protein; 99.8 1.6E-18 3.4E-23 157.9 16.1 287 30-367 60-386 (389)
283 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.1E-17 2.3E-22 151.7 21.6 301 16-362 3-352 (352)
284 PRK15407 lipopolysaccharide bi 99.8 4.4E-17 9.5E-22 150.1 25.4 292 33-366 63-435 (438)
285 PRK07811 cystathionine gamma-s 99.8 5.8E-18 1.3E-22 154.1 19.1 218 30-281 58-278 (388)
286 PRK00451 glycine dehydrogenase 99.8 1.3E-16 2.8E-21 149.0 28.0 281 36-365 115-446 (447)
287 PRK07050 cystathionine beta-ly 99.8 4E-18 8.7E-23 155.2 17.3 295 29-367 61-391 (394)
288 PRK08861 cystathionine gamma-s 99.8 5.1E-18 1.1E-22 153.5 17.7 216 30-281 50-270 (388)
289 KOG2862 Alanine-glyoxylate ami 99.8 9.2E-17 2E-21 133.2 23.5 326 6-367 20-382 (385)
290 TIGR01329 cysta_beta_ly_E cyst 99.8 8.1E-18 1.7E-22 152.7 16.9 288 32-367 46-375 (378)
291 PRK07269 cystathionine gamma-s 99.8 3.1E-17 6.6E-22 147.7 20.2 231 30-303 51-288 (364)
292 PLN03226 serine hydroxymethylt 99.8 2.9E-15 6.3E-20 138.9 32.6 315 10-366 46-418 (475)
293 PRK07582 cystathionine gamma-l 99.8 9E-17 2E-21 145.3 21.6 215 29-281 47-264 (366)
294 PRK08574 cystathionine gamma-s 99.8 5.9E-17 1.3E-21 147.1 20.4 215 30-280 50-268 (385)
295 PRK13580 serine hydroxymethylt 99.8 1.4E-15 3.1E-20 138.5 29.2 290 34-366 96-444 (493)
296 PRK06084 O-acetylhomoserine am 99.8 3.8E-17 8.3E-22 149.9 18.9 218 31-281 56-308 (425)
297 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 9.3E-18 2E-22 154.3 14.8 163 30-223 54-219 (418)
298 PRK09028 cystathionine beta-ly 99.8 2.5E-17 5.4E-22 148.8 17.3 214 32-281 60-277 (394)
299 KOG1357 Serine palmitoyltransf 99.8 9.9E-17 2.2E-21 139.4 18.8 318 1-365 141-500 (519)
300 PLN02414 glycine dehydrogenase 99.8 7.5E-16 1.6E-20 151.7 27.2 301 33-367 568-907 (993)
301 TIGR03588 PseC UDP-4-keto-6-de 99.8 6.7E-16 1.4E-20 141.1 25.0 311 12-365 10-380 (380)
302 KOG1549 Cysteine desulfurase N 99.8 6.1E-16 1.3E-20 135.8 23.2 191 6-223 51-257 (428)
303 PRK08248 O-acetylhomoserine am 99.7 1.1E-16 2.4E-21 147.0 19.3 221 30-281 61-313 (431)
304 PRK04366 glycine dehydrogenase 99.7 2.5E-15 5.4E-20 140.5 28.2 321 9-367 81-448 (481)
305 PRK05994 O-acetylhomoserine am 99.7 1.5E-16 3.2E-21 146.4 18.6 218 31-281 61-312 (427)
306 PTZ00094 serine hydroxymethylt 99.7 2.6E-15 5.6E-20 139.8 26.4 317 10-366 46-407 (452)
307 PRK02769 histidine decarboxyla 99.7 4.5E-15 9.8E-20 134.0 26.9 289 32-366 64-371 (380)
308 PLN02509 cystathionine beta-ly 99.7 1.5E-16 3.2E-21 146.4 17.4 210 32-281 132-349 (464)
309 PRK06702 O-acetylhomoserine am 99.7 1.9E-16 4E-21 144.4 17.8 214 32-281 60-310 (432)
310 PRK05967 cystathionine beta-ly 99.7 1.3E-16 2.8E-21 143.9 16.6 217 31-281 62-280 (395)
311 PLN03032 serine decarboxylase; 99.7 5.6E-15 1.2E-19 132.4 26.7 305 13-364 38-373 (374)
312 TIGR01788 Glu-decarb-GAD gluta 99.7 4.1E-15 9E-20 136.1 26.3 326 8-368 51-430 (431)
313 PRK05939 hypothetical protein; 99.7 5.5E-16 1.2E-20 141.1 20.3 162 31-222 45-207 (397)
314 COG2873 MET17 O-acetylhomoseri 99.7 5.9E-16 1.3E-20 131.9 18.0 163 30-223 59-224 (426)
315 PRK07671 cystathionine beta-ly 99.7 3.3E-16 7E-21 142.0 17.5 216 30-280 47-265 (377)
316 cd00615 Orn_deC_like Ornithine 99.7 7.7E-17 1.7E-21 141.8 12.4 230 29-279 55-293 (294)
317 PRK06176 cystathionine gamma-s 99.7 4.2E-16 9.1E-21 141.3 17.1 216 30-280 47-265 (380)
318 PRK08114 cystathionine beta-ly 99.7 4.1E-16 8.8E-21 140.6 16.7 215 31-281 60-280 (395)
319 PRK08064 cystathionine beta-ly 99.7 7.2E-16 1.6E-20 140.5 18.4 216 31-281 52-270 (390)
320 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 3.8E-16 8.3E-21 140.5 15.9 285 30-366 52-386 (386)
321 PRK03080 phosphoserine aminotr 99.7 5E-15 1.1E-19 134.9 22.9 308 10-367 23-373 (378)
322 TIGR03531 selenium_SpcS O-phos 99.7 5.8E-15 1.3E-19 134.5 22.8 297 33-365 105-444 (444)
323 PRK07812 O-acetylhomoserine am 99.7 1.8E-15 3.9E-20 138.8 18.8 217 32-281 68-317 (436)
324 PRK05355 3-phosphoserine/phosp 99.7 7E-15 1.5E-19 132.5 22.3 309 10-367 14-358 (360)
325 PRK08134 O-acetylhomoserine am 99.7 1.4E-15 3E-20 139.7 17.8 159 31-220 62-223 (433)
326 TIGR00461 gcvP glycine dehydro 99.7 1.9E-14 4.2E-19 140.2 26.2 301 33-367 530-867 (939)
327 PRK05367 glycine dehydrogenase 99.7 1.2E-14 2.5E-19 144.0 24.6 302 33-367 542-875 (954)
328 PRK04311 selenocysteine syntha 99.7 3.4E-14 7.3E-19 130.9 25.3 309 10-366 98-463 (464)
329 PRK12566 glycine dehydrogenase 99.7 5.1E-14 1.1E-18 136.4 25.6 301 34-367 544-876 (954)
330 KOG1358 Serine palmitoyltransf 99.7 6.4E-15 1.4E-19 126.1 16.1 327 2-367 100-465 (467)
331 TIGR00474 selA seryl-tRNA(sec) 99.6 8.7E-14 1.9E-18 127.8 24.6 308 6-361 87-453 (454)
332 PRK05613 O-acetylhomoserine am 99.6 3.2E-14 6.9E-19 130.6 20.0 220 31-281 67-322 (437)
333 COG0626 MetC Cystathionine bet 99.6 9.5E-15 2.1E-19 129.8 15.3 290 31-367 61-394 (396)
334 PLN02263 serine decarboxylase 99.6 8.8E-13 1.9E-17 120.2 27.2 289 32-366 132-442 (470)
335 TIGR01366 serC_3 phosphoserine 99.6 8.7E-14 1.9E-18 125.7 18.4 306 10-368 14-361 (361)
336 PRK15029 arginine decarboxylas 99.6 9.2E-14 2E-18 133.5 19.4 234 30-281 202-464 (755)
337 TIGR01364 serC_1 phosphoserine 99.6 8.7E-13 1.9E-17 118.4 24.2 307 10-367 3-348 (349)
338 cd01494 AAT_I Aspartate aminot 99.6 4.5E-14 9.9E-19 113.9 13.6 165 35-222 2-170 (170)
339 PRK06434 cystathionine gamma-l 99.6 7.8E-14 1.7E-18 125.9 15.8 211 31-280 62-277 (384)
340 PRK13237 tyrosine phenol-lyase 99.6 2.3E-12 4.9E-17 116.4 25.1 304 31-366 76-432 (460)
341 PLN02880 tyrosine decarboxylas 99.6 8.1E-13 1.8E-17 123.3 23.0 311 31-367 120-484 (490)
342 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.7E-12 3.7E-17 116.9 23.4 311 31-366 69-425 (450)
343 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 6.5E-15 1.4E-19 131.9 7.5 231 30-280 63-316 (417)
344 PLN02590 probable tyrosine dec 99.5 9.9E-12 2.1E-16 116.2 28.1 310 32-367 169-532 (539)
345 cd00611 PSAT_like Phosphoserin 99.5 1.8E-12 3.9E-17 117.2 21.6 310 10-364 10-353 (355)
346 COG1448 TyrB Aspartate/tyrosin 99.5 7.6E-13 1.7E-17 113.9 17.8 299 26-364 62-395 (396)
347 KOG0053 Cystathionine beta-lya 99.5 8.2E-14 1.8E-18 122.3 11.9 215 31-281 75-294 (409)
348 COG1003 GcvP Glycine cleavage 99.5 9.1E-12 2E-16 108.7 23.7 300 33-367 109-447 (496)
349 PLN02724 Molybdenum cofactor s 99.5 1.3E-11 2.9E-16 122.4 26.1 310 33-365 78-486 (805)
350 TIGR03799 NOD_PanD_pyr putativ 99.5 1E-11 2.2E-16 116.3 23.8 308 32-360 128-518 (522)
351 PLN02271 serine hydroxymethylt 99.5 7.8E-11 1.7E-15 108.4 28.5 269 51-366 217-539 (586)
352 COG0112 GlyA Glycine/serine hy 99.5 9.2E-11 2E-15 101.6 25.3 310 10-366 38-389 (413)
353 PLN02452 phosphoserine transam 99.4 3.8E-11 8.3E-16 107.8 22.6 309 10-367 18-363 (365)
354 PRK13578 ornithine decarboxyla 99.4 9.6E-12 2.1E-16 118.6 19.3 314 31-364 172-562 (720)
355 PF12897 Aminotran_MocR: Alani 99.4 5.4E-11 1.2E-15 103.0 21.6 296 27-364 63-412 (425)
356 COG1103 Archaea-specific pyrid 99.4 9.6E-11 2.1E-15 96.0 21.8 323 9-368 28-381 (382)
357 TIGR01365 serC_2 phosphoserine 99.4 3.9E-11 8.5E-16 107.8 21.5 295 32-367 38-373 (374)
358 COG0076 GadB Glutamate decarbo 99.4 4.9E-11 1.1E-15 109.7 22.5 264 13-302 77-379 (460)
359 KOG0258 Alanine aminotransfera 99.4 1.2E-11 2.7E-16 106.1 16.5 306 10-339 87-437 (475)
360 PF01212 Beta_elim_lyase: Beta 99.4 1.1E-12 2.4E-17 113.8 9.4 196 10-228 7-214 (290)
361 PRK15399 lysine decarboxylase 99.4 4.8E-11 1E-15 113.8 21.2 311 31-364 193-556 (713)
362 PRK15400 lysine decarboxylase 99.4 2.7E-11 5.8E-16 115.5 17.9 313 31-364 193-556 (714)
363 KOG2040 Glycine dehydrogenase 99.4 9.4E-11 2E-15 106.9 20.4 300 33-367 582-918 (1001)
364 COG3844 Kynureninase [Amino ac 99.4 3E-10 6.5E-15 95.7 21.3 321 4-367 37-402 (407)
365 PF00464 SHMT: Serine hydroxym 99.4 1E-10 2.2E-15 104.8 19.6 306 10-360 32-398 (399)
366 COG1982 LdcC Arginine/lysine/o 99.4 3E-10 6.4E-15 104.3 22.1 306 31-362 68-403 (557)
367 TIGR02617 tnaA_trp_ase tryptop 99.3 2.7E-09 5.7E-14 95.7 25.2 326 10-366 55-440 (467)
368 PF00282 Pyridoxal_deC: Pyrido 99.3 9.9E-10 2.1E-14 99.3 20.6 174 32-223 78-277 (373)
369 PRK12462 phosphoserine aminotr 99.2 9.4E-09 2E-13 91.6 24.1 309 10-366 15-361 (364)
370 PLN02414 glycine dehydrogenase 99.2 1E-08 2.3E-13 101.9 23.7 300 11-362 118-464 (993)
371 PRK05367 glycine dehydrogenase 99.1 2.7E-08 5.8E-13 99.4 21.1 275 34-362 122-437 (954)
372 COG1921 SelA Selenocysteine sy 99.0 5.7E-08 1.2E-12 85.6 19.5 219 10-260 39-271 (395)
373 PF03841 SelA: L-seryl-tRNA se 98.9 1.9E-09 4E-14 94.0 5.3 250 5-281 11-296 (367)
374 COG0403 GcvP Glycine cleavage 98.9 3.3E-06 7.2E-11 74.5 24.0 285 37-365 124-448 (450)
375 TIGR03811 tyr_de_CO2_Ent tyros 98.8 9.3E-07 2E-11 84.2 21.5 233 31-281 121-475 (608)
376 PF06838 Met_gamma_lyase: Meth 98.8 6.6E-07 1.4E-11 77.5 17.7 199 12-230 27-246 (403)
377 KOG0629 Glutamate decarboxylas 98.8 2.3E-06 4.9E-11 75.2 19.9 306 35-367 143-509 (510)
378 PF04864 Alliinase_C: Allinase 98.8 6.8E-08 1.5E-12 82.9 10.3 279 33-364 43-362 (363)
379 COG3033 TnaA Tryptophanase [Am 98.7 3.9E-05 8.4E-10 66.3 24.6 316 30-366 76-443 (471)
380 TIGR00461 gcvP glycine dehydro 98.7 6E-06 1.3E-10 81.8 22.4 277 35-362 111-426 (939)
381 KOG1412 Aspartate aminotransfe 98.7 2E-06 4.4E-11 72.5 16.1 218 52-286 102-340 (410)
382 KOG2467 Glycine/serine hydroxy 98.7 2.5E-05 5.4E-10 67.5 22.6 316 11-365 53-424 (477)
383 PF05889 SLA_LP_auto_ag: Solub 98.7 4.2E-06 9.1E-11 74.0 18.5 289 48-366 73-389 (389)
384 PF02347 GDC-P: Glycine cleava 98.6 2.4E-06 5.1E-11 77.3 14.6 278 34-361 111-429 (429)
385 KOG1411 Aspartate aminotransfe 98.3 1.3E-05 2.8E-10 68.7 12.8 174 29-219 91-285 (427)
386 COG1932 SerC Phosphoserine ami 98.1 0.0019 4.2E-08 56.4 22.0 323 1-367 3-363 (365)
387 KOG1383 Glutamate decarboxylas 98.1 0.00024 5.2E-09 63.7 16.6 320 11-367 93-446 (491)
388 COG4100 Cystathionine beta-lya 98.1 0.00019 4.2E-09 60.6 14.6 183 26-230 58-257 (416)
389 KOG0628 Aromatic-L-amino-acid/ 98.1 0.001 2.2E-08 59.7 19.8 281 53-367 143-471 (511)
390 KOG3846 L-kynurenine hydrolase 98.1 0.0014 3E-08 55.8 18.9 329 5-367 74-461 (465)
391 PRK12566 glycine dehydrogenase 97.9 0.0018 3.8E-08 64.5 19.8 274 36-362 127-439 (954)
392 PLN02994 1-aminocyclopropane-1 96.9 0.009 2E-07 46.7 8.5 54 32-87 95-153 (153)
393 KOG3843 Predicted serine hydro 96.3 0.26 5.6E-06 41.4 14.0 54 126-183 142-196 (432)
394 KOG2040 Glycine dehydrogenase 96.0 0.87 1.9E-05 43.5 17.1 269 42-362 172-478 (1001)
395 KOG0352 ATP-dependent DNA heli 76.6 34 0.00075 31.5 10.0 55 137-207 110-168 (641)
396 PF12138 Spherulin4: Spherulat 64.4 24 0.00051 30.3 6.2 52 127-178 18-71 (253)
397 PLN02672 methionine S-methyltr 63.4 63 0.0014 34.1 9.9 150 14-183 406-566 (1082)
398 PRK04148 hypothetical protein; 60.2 75 0.0016 24.2 10.3 25 156-180 84-108 (134)
399 COG2870 RfaE ADP-heptose synth 58.7 19 0.00042 32.8 4.8 51 126-182 129-179 (467)
400 cd03324 rTSbeta_L-fuconate_deh 55.3 1.8E+02 0.0039 27.1 11.4 46 126-179 305-350 (415)
401 COG0108 RibB 3,4-dihydroxy-2-b 51.6 24 0.00051 28.8 3.8 36 139-179 155-190 (203)
402 PF03652 UPF0081: Uncharacteri 51.1 83 0.0018 24.0 6.7 57 126-184 39-98 (135)
403 cd03328 MR_like_3 Mandelate ra 50.9 1.8E+02 0.0038 26.4 9.9 46 126-179 246-291 (352)
404 cd03315 MLE_like Muconate lact 50.3 1.6E+02 0.0036 25.2 9.7 47 126-180 191-237 (265)
405 TIGR00789 flhB_rel flhB C-term 50.0 16 0.00034 25.2 2.2 23 163-185 29-51 (82)
406 COG1105 FruK Fructose-1-phosph 48.8 55 0.0012 29.0 5.9 38 143-184 132-169 (310)
407 smart00642 Aamy Alpha-amylase 46.4 27 0.00058 27.7 3.5 24 161-184 70-93 (166)
408 PF07905 PucR: Purine cataboli 46.2 69 0.0015 23.8 5.5 46 127-179 58-104 (123)
409 cd03325 D-galactonate_dehydrat 46.1 1.5E+02 0.0032 26.9 8.7 46 126-179 238-283 (352)
410 TIGR00524 eIF-2B_rel eIF-2B al 45.1 2.2E+02 0.0048 25.2 10.9 53 128-183 187-241 (303)
411 cd03320 OSBS o-Succinylbenzoat 44.7 2E+02 0.0044 24.7 10.8 47 126-180 187-233 (263)
412 KOG1465 Translation initiation 44.4 2.2E+02 0.0049 25.1 13.4 107 48-180 161-270 (353)
413 TIGR00511 ribulose_e2b2 ribose 43.5 2.3E+02 0.0051 25.0 11.4 108 50-183 116-227 (301)
414 cd03319 L-Ala-DL-Glu_epimerase 43.5 2.4E+02 0.0051 25.0 10.0 47 126-180 239-285 (316)
415 PRK08535 translation initiatio 43.0 2.4E+02 0.0053 25.1 11.2 105 50-180 121-228 (310)
416 COG0352 ThiE Thiamine monophos 41.2 29 0.00062 28.8 3.0 94 127-228 24-119 (211)
417 PF06153 DUF970: Protein of un 39.4 22 0.00048 25.9 1.8 50 317-366 9-65 (109)
418 PRK13602 putative ribosomal pr 38.0 87 0.0019 21.4 4.5 45 127-181 16-60 (82)
419 COG4948 L-alanine-DL-glutamate 37.9 3E+02 0.0066 25.1 9.5 123 34-179 173-295 (372)
420 COG0391 Uncharacterized conser 37.7 3E+02 0.0065 24.6 9.1 49 126-176 209-257 (323)
421 TIGR00160 MGSA methylglyoxal s 37.4 1.8E+02 0.004 22.4 6.4 55 127-186 62-116 (143)
422 KOG3974 Predicted sugar kinase 37.1 49 0.0011 28.3 3.7 48 126-180 91-138 (306)
423 COG0296 GlgB 1,4-alpha-glucan 37.0 37 0.0008 33.2 3.4 28 159-186 212-239 (628)
424 PF05368 NmrA: NmrA-like famil 36.8 1E+02 0.0023 25.6 5.9 54 118-179 46-99 (233)
425 PF13481 AAA_25: AAA domain; P 36.2 73 0.0016 25.6 4.7 52 127-179 129-184 (193)
426 cd04937 ACT_AKi-DapG-BS_2 ACT 35.4 66 0.0014 20.5 3.5 46 320-365 17-62 (64)
427 PF00128 Alpha-amylase: Alpha 35.2 36 0.00079 29.7 3.0 24 161-184 52-75 (316)
428 TIGR00506 ribB 3,4-dihydroxy-2 35.0 70 0.0015 26.3 4.2 35 140-179 157-191 (199)
429 COG2257 Uncharacterized homolo 34.7 27 0.00058 24.2 1.5 24 163-186 34-57 (92)
430 PF05213 Corona_NS2A: Coronavi 34.7 59 0.0013 26.8 3.6 46 322-367 25-71 (248)
431 PF13872 AAA_34: P-loop contai 34.2 29 0.00062 30.5 2.0 22 163-184 161-183 (303)
432 PF00926 DHBP_synthase: 3,4-di 33.9 61 0.0013 26.5 3.7 35 140-179 152-186 (194)
433 PRK15072 bifunctional D-altron 33.8 2.8E+02 0.0061 25.7 8.6 119 37-179 194-313 (404)
434 cd07571 ALP_N-acyl_transferase 33.0 99 0.0022 26.7 5.2 53 127-179 25-77 (270)
435 cd04923 ACT_AK-LysC-DapG-like_ 33.0 74 0.0016 19.7 3.4 45 321-365 17-61 (63)
436 cd03327 MR_like_2 Mandelate ra 32.5 2.6E+02 0.0055 25.2 8.0 46 126-179 233-278 (341)
437 PF05621 TniB: Bacterial TniB 31.9 1E+02 0.0022 27.2 5.0 97 132-230 139-248 (302)
438 PRK14017 galactonate dehydrata 31.9 4.1E+02 0.0088 24.4 9.5 46 126-179 239-284 (382)
439 PRK05583 ribosomal protein L7A 31.8 1.2E+02 0.0027 21.8 4.7 43 127-179 22-64 (104)
440 PF01081 Aldolase: KDPG and KH 31.7 67 0.0015 26.3 3.6 39 126-180 69-107 (196)
441 PRK06552 keto-hydroxyglutarate 31.6 3E+02 0.0066 22.9 9.0 38 126-179 77-114 (213)
442 cd03322 rpsA The starvation se 31.1 4.1E+02 0.0088 24.2 10.6 46 126-179 225-270 (361)
443 COG3589 Uncharacterized conser 31.0 1.1E+02 0.0024 27.4 4.9 61 162-230 50-111 (360)
444 COG4294 Uve UV damage repair e 30.8 2.6E+02 0.0056 24.6 6.9 51 127-184 190-240 (347)
445 cd01827 sialate_O-acetylestera 30.8 1.1E+02 0.0023 24.5 4.8 52 127-178 95-152 (188)
446 cd03321 mandelate_racemase Man 30.8 2.1E+02 0.0045 26.0 7.1 45 126-178 248-292 (355)
447 PRK13601 putative L7Ae-like ri 30.3 1.4E+02 0.003 20.5 4.4 47 127-183 13-59 (82)
448 PF02603 Hpr_kinase_N: HPr Ser 30.2 53 0.0011 24.7 2.7 17 163-179 94-110 (127)
449 PRK06683 hypothetical protein; 30.0 1.4E+02 0.0029 20.5 4.4 48 127-184 16-63 (82)
450 PF13401 AAA_22: AAA domain; P 29.8 69 0.0015 23.6 3.3 26 159-184 72-98 (131)
451 COG1088 RfbB dTDP-D-glucose 4, 29.5 4.1E+02 0.0088 23.7 11.4 64 121-186 57-133 (340)
452 TIGR00250 RNAse_H_YqgF RNAse H 29.2 1.6E+02 0.0035 22.2 5.1 57 126-184 36-94 (130)
453 PRK15440 L-rhamnonate dehydrat 29.2 4.4E+02 0.0095 24.4 8.9 46 126-179 272-317 (394)
454 PRK13396 3-deoxy-7-phosphohept 28.7 4.5E+02 0.0098 23.9 11.0 41 140-184 236-281 (352)
455 PRK00910 ribB 3,4-dihydroxy-2- 28.6 1E+02 0.0022 25.7 4.2 35 140-179 168-202 (218)
456 smart00545 JmjN Small domain f 28.4 78 0.0017 18.5 2.5 23 157-179 13-35 (42)
457 TIGR03849 arch_ComA phosphosul 28.1 64 0.0014 27.3 3.0 52 126-181 10-61 (237)
458 TIGR00075 hypD hydrogenase exp 28.1 2.9E+02 0.0063 25.1 7.1 107 50-180 116-224 (369)
459 PRK06015 keto-hydroxyglutarate 28.0 80 0.0017 26.0 3.5 39 126-180 65-103 (201)
460 cd04936 ACT_AKii-LysC-BS-like_ 27.8 1E+02 0.0022 19.0 3.5 45 321-365 17-61 (63)
461 cd04920 ACT_AKiii-DAPDC_2 ACT 27.8 1.1E+02 0.0024 19.4 3.6 45 321-365 17-61 (63)
462 PRK01018 50S ribosomal protein 27.7 1.4E+02 0.0029 21.3 4.3 43 127-179 21-63 (99)
463 cd01455 vWA_F11C1-5a_type Von 27.5 2.2E+02 0.0047 23.3 5.8 33 143-179 115-147 (191)
464 PRK15062 hydrogenase isoenzyme 27.4 4.1E+02 0.0088 24.2 7.9 107 50-180 110-218 (364)
465 TIGR01305 GMP_reduct_1 guanosi 26.9 4.8E+02 0.01 23.6 10.5 54 126-180 160-218 (343)
466 PF05913 DUF871: Bacterial pro 26.8 1.3E+02 0.0028 27.4 5.0 59 161-227 47-106 (357)
467 TIGR01182 eda Entner-Doudoroff 26.7 94 0.002 25.7 3.7 39 126-180 69-107 (204)
468 cd04915 ACT_AK-Ectoine_2 ACT d 26.6 1.1E+02 0.0025 19.6 3.5 46 320-365 17-64 (66)
469 cd03316 MR_like Mandelate race 26.5 4.8E+02 0.01 23.5 11.7 46 126-179 251-296 (357)
470 cd04918 ACT_AK1-AT_2 ACT domai 25.9 1.3E+02 0.0029 19.1 3.7 45 321-365 17-63 (65)
471 PRK07283 hypothetical protein; 25.8 1.5E+02 0.0032 21.1 4.2 44 127-180 23-66 (98)
472 PRK03767 NAD(P)H:quinone oxido 25.8 3.7E+02 0.0079 21.9 7.2 37 140-180 107-143 (200)
473 PRK00014 ribB 3,4-dihydroxy-2- 25.8 1.2E+02 0.0026 25.5 4.2 39 140-183 172-211 (230)
474 TIGR00683 nanA N-acetylneurami 25.7 4.6E+02 0.0099 23.0 9.5 55 32-87 53-109 (290)
475 PF07282 OrfB_Zn_ribbon: Putat 25.6 96 0.0021 20.1 3.0 23 162-184 4-27 (69)
476 cd03318 MLE Muconate Lactonizi 25.4 4.3E+02 0.0092 24.0 8.2 46 126-179 250-295 (365)
477 COG1377 FlhB Flagellar biosynt 25.2 1.3E+02 0.0029 27.3 4.6 45 139-183 261-318 (363)
478 TIGR01766 tspaseT_teng_C trans 25.2 86 0.0019 21.1 2.8 22 163-184 59-81 (82)
479 PRK01792 ribB 3,4-dihydroxy-2- 25.1 1.3E+02 0.0028 25.1 4.2 35 140-179 167-201 (214)
480 PF00150 Cellulase: Cellulase 24.9 80 0.0017 27.1 3.3 20 161-180 62-81 (281)
481 PF00586 AIRS: AIR synthase re 24.9 1.2E+02 0.0027 21.1 3.7 21 159-179 73-93 (96)
482 KOG0369 Pyruvate carboxylase [ 24.4 88 0.0019 30.8 3.5 31 151-185 165-195 (1176)
483 COG3155 ElbB Uncharacterized p 24.3 63 0.0014 25.3 2.1 34 197-230 111-145 (217)
484 cd01422 MGS Methylglyoxal synt 24.1 2.9E+02 0.0064 20.2 5.9 47 128-180 60-107 (115)
485 PRK09355 hydroxyethylthiazole 24.0 76 0.0017 27.4 2.9 47 126-183 44-93 (263)
486 PF04002 RadC: RadC-like JAB d 23.9 2.6E+02 0.0056 20.8 5.4 46 128-177 55-103 (123)
487 PF14871 GHL6: Hypothetical gl 23.9 3.3E+02 0.0071 20.7 6.6 20 160-179 43-62 (132)
488 PTZ00106 60S ribosomal protein 23.9 1.9E+02 0.0042 21.0 4.5 44 127-180 30-73 (108)
489 PRK08335 translation initiatio 23.5 5E+02 0.011 22.7 10.9 104 50-179 110-216 (275)
490 COG4152 ABC-type uncharacteriz 23.5 4.9E+02 0.011 22.6 8.9 35 126-172 165-199 (300)
491 cd00308 enolase_like Enolase-s 23.3 4.4E+02 0.0095 21.9 9.1 46 126-179 156-201 (229)
492 cd04922 ACT_AKi-HSDH-ThrA_2 AC 23.2 1.7E+02 0.0038 18.2 3.9 46 320-365 17-64 (66)
493 PF03460 NIR_SIR_ferr: Nitrite 23.2 77 0.0017 20.5 2.2 21 153-175 18-38 (69)
494 PF13840 ACT_7: ACT domain ; P 23.1 56 0.0012 21.1 1.5 43 320-363 23-65 (65)
495 PRK09441 cytoplasmic alpha-amy 23.1 73 0.0016 30.4 2.8 22 163-184 83-104 (479)
496 PF01408 GFO_IDH_MocA: Oxidore 23.0 2.5E+02 0.0055 20.2 5.3 44 127-180 76-119 (120)
497 PRK07714 hypothetical protein; 22.9 2E+02 0.0044 20.4 4.5 43 127-179 23-65 (100)
498 COG0521 MoaB Molybdopterin bio 22.9 85 0.0018 25.0 2.6 11 56-66 50-60 (169)
499 cd07576 R-amidase_like Pseudom 22.8 1.3E+02 0.0029 25.4 4.3 54 127-180 18-81 (254)
500 COG0156 BioF 7-keto-8-aminopel 22.7 6.2E+02 0.013 23.4 10.7 65 33-98 57-122 (388)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-58 Score=396.71 Aligned_cols=339 Identities=32% Similarity=0.414 Sum_probs=306.1
Q ss_pred ceeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC---Cce
Q 017633 3 QLIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG---RER 77 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~---~~~ 77 (368)
+++++||.||.+++++.+++++..+ .-+.++...+|.+.|++..+..++|+|+|||+||++.|++++|.+.. +.+
T Consensus 52 av~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~ 131 (404)
T COG4992 52 AVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSK 131 (404)
T ss_pred eeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcE
Confidence 5799999999999999999998643 34678999999999999987689999999999999999999999976 678
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
||.+..+|||.+..++..++.+.....+. ...+.+.++|++|+++++++++ ++++++++||+++.+|...
T Consensus 132 Iia~~nsFHGRT~galS~t~~~ky~~~F~-------Pl~~g~~~vpfnDi~al~~ai~---~~taAvivEPIQGEgGV~~ 201 (404)
T COG4992 132 IIAFENSFHGRTLGALSATGQPKYRKGFG-------PLLPGFRHVPFNDIEALEAAID---EDTAAVIVEPIQGEGGVIP 201 (404)
T ss_pred EEEEcCCcCCccceeeeccCChhhccCCC-------CCCCCceecCCCCHHHHHHHhc---cCeEEEEEecccCCCCCCC
Confidence 99999999999999999998865433321 2223578899999999999999 4899999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
++++|+++++++|++||++||.||+|+|+ |+|++|+++++++.||+++++|++|||+|+|.+++++...+.+. +..
T Consensus 202 ~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~---~G~ 278 (404)
T COG4992 202 APPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFT---PGD 278 (404)
T ss_pred CCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCC---CCc
Confidence 99999999999999999999999999999 99999999999999999999999999999999999966666666 677
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
|++||++||++++++.++++.+.++++.++.++..++++++|+++..+++....+++.|.|+++++...
T Consensus 279 HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~----------- 347 (404)
T COG4992 279 HGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP----------- 347 (404)
T ss_pred ccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc-----------
Confidence 999999999999999999999999999999999999999999999988888889999999999998642
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+.++.+.|.++|+++.+.+...+| |++.++++|+++++++|++++..
T Consensus 348 --~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 348 --YRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred --ccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 13578999999999999998877765 68999999999999999999864
No 2
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.5e-55 Score=382.01 Aligned_cols=363 Identities=57% Similarity=0.977 Sum_probs=337.5
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+.|||++|.|++++.++++++..|+.|++.+.++++.+.+.++..+.|.|++|||||...|++++|.++++++|+.|.+.
T Consensus 65 ~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~ 144 (432)
T COG0001 65 LILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGC 144 (432)
T ss_pred cccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 57999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|||+.+..+...+.+......|...+++......+..+|+||++.+++++++..+++++|++||+.+|.|.+.|+++|++
T Consensus 145 YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~ 224 (432)
T COG0001 145 YHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLE 224 (432)
T ss_pred CCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHH
Confidence 99999999998876665444588889988888899999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
+++++|++||++||.||+++|||.....+...+++.||+.+++|.+|||+|+|.+.+++++++.+...++.++.+|+++|
T Consensus 225 ~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgn 304 (432)
T COG0001 225 GLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGN 304 (432)
T ss_pred HHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCc
Confidence 99999999999999999999997666677888999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 245 PLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
+++++|+.++++.+.+ ++..+++.+..++|++.|++...+.+.+..+...+.++.+.+....+.++.+....+......
T Consensus 305 plamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~ 384 (432)
T COG0001 305 PLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAK 384 (432)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHH
Confidence 9999999999999977 458999999999999999999999999999999999999999887778888777666666778
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+...|+++||++.|+.....+++..+++++|++.++++++++++
T Consensus 385 ~~~~~l~~GV~l~ps~~ea~flS~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 385 FFHHLLNRGVYLAPSQFEAGFLSTAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred HHHHHHhCCcccCCccccceeeecccCHHHHHHHHHHHHHHHHH
Confidence 88899999999999987777889999999999999999988865
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-53 Score=376.35 Aligned_cols=357 Identities=30% Similarity=0.420 Sum_probs=303.1
Q ss_pred ceeccCCCcHHHHHHHHHHHHcCCC--C-CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 3 QLIILFPSYLQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~~~~~~~~--~-~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+.++||+||.|++++.+++++..+ + +.+.+...+++|+|.+..+ +.+.++|++||++|++.|+++++.++++..
T Consensus 66 ~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~ 145 (447)
T COG0160 66 AVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPG 145 (447)
T ss_pred chhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCc
Confidence 4678999999999999999998542 2 2334899999999999998 478999999999999999999999999999
Q ss_pred EEEEcCCCCCCchhhhhhcCCCcccc-CCC-CCCCCCCCCCCcccccCCC---------CHHHHHHHHHc---CCCCeEE
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATL-GLP-DSPGVPKGATYETLTAPFN---------DVSALENLFEN---NKGEIAA 143 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~---------d~~~le~~~~~---~~~~~~~ 143 (368)
||.+.++|||.+..++.+++....+. .+. ...++.+...+..+..|+. ..+.+++.+.. .+.++++
T Consensus 146 viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAa 225 (447)
T COG0160 146 VIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAA 225 (447)
T ss_pred EEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeE
Confidence 99999999999999999998865442 222 2222444444444444432 24456664443 4568999
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeeh
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~ 222 (368)
+++||+++.+|.+.+|++|++++.++|++||+++|+||+|+|| |+|++|+++++++.||++|+||++++|+|+|.++.+
T Consensus 226 iI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r 305 (447)
T COG0160 226 IIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGR 305 (447)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeEEecc
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
+++.+ .. +..+.+||.+|+++++++++.++.++++++.++..+..++++++|.++..+++....+++.|.|+++++
T Consensus 306 ~ei~~-~~---~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~ 381 (447)
T COG0160 306 AEIMD-WP---PGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVEL 381 (447)
T ss_pred HHhcc-cC---CcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEE
Confidence 99988 44 455788999999999999999999998999999999999999999999999998889999999999999
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC--CCcc--ccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAG--FTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~~--~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
....- .+.|+......+.+.++++|+.+..+| ...+ ++++.++++++++++++|++++.++
T Consensus 382 v~d~~-----t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 382 VKDRD-----TKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ecCCC-----CCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 75320 011345667899999999999888877 4443 4799999999999999999998753
No 4
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=2.4e-51 Score=377.36 Aligned_cols=365 Identities=83% Similarity=1.318 Sum_probs=305.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|+|.+++.++++++..++.+++...+|++.+.+..++.++++|++||+||++.|+++++.++++++||.+.+
T Consensus 110 ~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g 189 (474)
T PLN02482 110 PAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEG 189 (474)
T ss_pred ccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 46899999999999999999987778888999999999999998789999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||++.......+.+......+...+++......+..++++|++++++.+.+++++++++++||+.+++|.+.++++|+
T Consensus 190 ~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl 269 (474)
T PLN02482 190 CYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFL 269 (474)
T ss_pred ccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHH
Confidence 99998765444433322111123334444444456677899999999999987767899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
+++.++|++||++||+||+++|||.|..++.+++++.||++++||++++|+++|.+++++++++.+...+...+++|+++
T Consensus 270 ~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~g 349 (474)
T PLN02482 270 EGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSG 349 (474)
T ss_pred HHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcch
Confidence 99999999999999999999999777777888899999999999999999999999999999998875445678899999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
|++++++++++++.++++++.+++.++.++++++|+++..+.+.+......+.++++.+...++.++.+...++......
T Consensus 350 npl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~ 429 (474)
T PLN02482 350 NPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFAR 429 (474)
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHH
Confidence 99999999999999988889999999999999999998877665544445556778877654433333322223334567
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.+.|+++||++.+.+.+...+++.++++||+++++++++++.++
T Consensus 430 ~~~~l~~~Gv~~~~~~~~~~~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 430 FHRGMLEEGVYLAPSQFEAGFTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHCCeEEeccCCCCCcCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 899999999999987554446899999999999999999998764
No 5
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.8e-52 Score=367.71 Aligned_cols=360 Identities=27% Similarity=0.317 Sum_probs=303.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|++.+++.+|+++..++ +.++++..+|+++|+++.| + .++|||++|||+|++.|+++++.|
T Consensus 55 ~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~ 134 (449)
T COG0161 55 CVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQ 134 (449)
T ss_pred HhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999996543 5567779999999999998 6 899999999999999999999877
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccc-cCC-CCCCCCCCCCCCcccccCC---------CCHHHHHHHHHcC-CCC
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVAT-LGL-PDSPGVPKGATYETLTAPF---------NDVSALENLFENN-KGE 140 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~---------~d~~~le~~~~~~-~~~ 140 (368)
+++.++|....+|||.+..++..++....+ ..+ +......+...+..+..+. ...++||+.+.++ +++
T Consensus 135 p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~ 214 (449)
T COG0161 135 PQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPET 214 (449)
T ss_pred CcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCccc
Confidence 345669999999999999999999843322 222 2233332333333222221 1367888888875 489
Q ss_pred eEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccce
Q 017633 141 IAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVG 217 (368)
Q Consensus 141 ~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG 217 (368)
++++++||+.+. +|++++|+.|++++.++|++||++||.||+.+|| |+|+.|+++++++.||+++++|++++| +|+|
T Consensus 215 IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~ 294 (449)
T COG0161 215 IAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLS 294 (449)
T ss_pred EEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhH
Confidence 999999999988 9999999999999999999999999999999999 999999999999999999999999999 6999
Q ss_pred eeeehHHHHHHhcC--CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 218 AYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 218 ~v~~~~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
.+++++++.+.+.. .+.+.|+.||++||++|+++++.++.++++++.++.++...++.++|..++...+.+..+++.|
T Consensus 295 a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~G 374 (449)
T COG0161 295 AVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLG 374 (449)
T ss_pred hHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccc
Confidence 99999999998775 4668999999999999999999999999999999999999999999999766667888999999
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.++++....-+- .+.+......+.+.++++|++++|.++.. +.|+++++++|++++++++++++++
T Consensus 375 li~~iElv~d~~t~----~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 375 LIGAIELVADKATK----TPFEARVGARVRAAALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred eEEEEEEecccccc----cchhhhHHHHHHHHHHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999998653211 00012235678899999999999997644 3579999999999999999999864
No 6
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.5e-50 Score=369.27 Aligned_cols=365 Identities=49% Similarity=0.876 Sum_probs=303.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++||++|+|.+++.++++++..++++++...+++++|.+..++.++++|++||++|++.|+++++.++++.+||.+.+
T Consensus 64 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~ 143 (428)
T PRK12389 64 PIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAG 143 (428)
T ss_pred ccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 56799999999999999999876667788999999999999988778999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||.+..++...+........+...++......++..++++|++.+++.+.++.++++++++||+.+++|.+.++++|+
T Consensus 144 ~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl 223 (428)
T PRK12389 144 CYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFL 223 (428)
T ss_pred CcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHH
Confidence 99999988888766432211112223333333456778888899999999987667899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||+++|+||+++|||.+..+..+++++.||++++||++++|+|+|.+++++++++.+...+...+++||++
T Consensus 224 ~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~g 303 (428)
T PRK12389 224 EAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAG 303 (428)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCcc
Confidence 99999999999999999999999666556677889999999999999999999999999999998864344567899999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
|++++++++++++.++++++.++++++.+++++.|+++..+++.+..+...+.++.+.+......++...+.++......
T Consensus 304 npl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~ 383 (428)
T PRK12389 304 NPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGK 383 (428)
T ss_pred CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHH
Confidence 99999999999999988889999999999999999998777776666644444778877643322221111122334568
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.+.|+++||.+.+.+.+.+.+++.++++|++++++++++++.++
T Consensus 384 ~~~~l~~~Gv~~~~~~~~~~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 384 FFKLMLNQGINLAPSKYEAWFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred HHHHHHHCCcEeecCCCCCeeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 889999999999987655567889999999999999999998764
No 7
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.1e-48 Score=361.37 Aligned_cols=365 Identities=59% Similarity=0.969 Sum_probs=298.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|+|++++.+++++...++.+++...+|+++|++.++..+++++++||++|++.|+++++.++++++||.+.+
T Consensus 59 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~ 138 (423)
T TIGR00713 59 PLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEG 138 (423)
T ss_pred ccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcC
Confidence 46799999999999999999877677788889999999999998668999999999999999999999989999999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||........++........+....+........+.++++|++++++.++++++++++++++|+++++|.+.++++|+
T Consensus 139 ~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l 218 (423)
T TIGR00713 139 CYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFL 218 (423)
T ss_pred CCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHH
Confidence 99998776666544322222223233333333445677888899999999986556899999999999999888889999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||+++|+||+|++|+.|..+..+.+++.||+++|||++++|+|+||+++++++++.+...+...+++|+++
T Consensus 219 ~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~ 298 (423)
T TIGR00713 219 AGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSG 298 (423)
T ss_pred HHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCC
Confidence 99999999999999999999999656556667788999999999999999999999999999998874334557789999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
++++++++.++++.++++++.+++++..+++++.|.+++.+++.+..+.+.|.++.+.+......++...+.++......
T Consensus 299 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 378 (423)
T TIGR00713 299 NPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAK 378 (423)
T ss_pred CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHH
Confidence 99999999999999987779999999999999999998888887777778899888877643221111111112223457
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.+.|+++||.+.+.+.+.+++...++++++++++++|++++.++
T Consensus 379 ~~~~l~~~Gv~v~~~~~~~~~l~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 379 FFHEMLDKGVFLPPSQFEACFLSAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHCCeEEecCCccceeeECCCCHHHHHHHHHHHHHHHhhC
Confidence 889999999999876544556666689999999999999999764
No 8
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=2.2e-48 Score=355.15 Aligned_cols=362 Identities=37% Similarity=0.607 Sum_probs=296.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCC-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+++||++|+|.+++.+++++...++.+++...+|+++|.+..+. .+.++|++||++|++.|+++++.++++.+|+.+.
T Consensus 64 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~ 143 (433)
T PRK00615 64 SLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFL 143 (433)
T ss_pred ccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 568999999999999999998777777888999999999999874 5799999999999999999999999999999999
Q ss_pred CCCCCCc---hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 83 GCYHGHA---DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 83 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
++|||.+ ...+...+..... .+...+ +.........++++|++++++.+.++.++++++++||+.+++|.+.++
T Consensus 144 ~~yHG~td~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~ 220 (433)
T PRK00615 144 GCYHGHADTLLQGISFSETSLDT--LTHLVD-TDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPK 220 (433)
T ss_pred CccCCCCcccCcccccCCCCcCc--CCCCCC-CCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCC
Confidence 9999987 3344333321100 000000 011122345567889999999998655679999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~ 239 (368)
++|+++|.++|++||+++|+||+|+|||.|..++.+++++.||++++||++++|+++|++++++++++.+...+..++++
T Consensus 221 ~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~ 300 (433)
T PRK00615 221 PGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAG 300 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCC
Confidence 99999999999999999999999999977777888889999999999999998999999999999999886444456778
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
|++++++++++++++++.++++++.++++++.++++++|++...+.+.+......|.++.+++......++......+..
T Consensus 301 T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~ 380 (433)
T PRK00615 301 TLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIE 380 (433)
T ss_pred CCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHH
Confidence 99999999999999999998888999999999999999999877766544444578899999875433222222112233
Q ss_pred HHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 320 KFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
....+...|.++||++.+...+...++..++++||++++++++++++++
T Consensus 381 ~~~~~~~~l~~~Gv~~~~~~~~~~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 381 AFQTFYQSAFSKGVYLSPSPFEASFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHCCeeecCccccccceecCCCHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999988766667888999999999999999998763
No 9
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.8e-48 Score=355.72 Aligned_cols=341 Identities=26% Similarity=0.346 Sum_probs=289.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc---CCce
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT---GRER 77 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~---~~~~ 77 (368)
++++||++|+|.+++.+++++.... +..++...+++++|++..+ +.+.++|++||+||++.|+++++.++ ++.+
T Consensus 86 ~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ 165 (442)
T TIGR03372 86 IFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFT 165 (442)
T ss_pred hhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcE
Confidence 5689999999999999999885433 3567889999999999987 45899999999999999999999884 6788
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCC
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g 154 (368)
||.+.++|||.+...+..++.......+. .....+..+|++|.+++++.+++ ++++++++++||+.+++|
T Consensus 166 ii~~~~~yHG~t~~~ls~t~~~~~~~~~~-------p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG 238 (442)
T TIGR03372 166 FIAASGAFHGKSLGALSATAKPAFRKPFM-------PLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGG 238 (442)
T ss_pred EEEECCCccCCCHHHhhccCCcccCCCCC-------CCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCC
Confidence 99999999999998888876532211111 11233567788899888888763 446799999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~ 232 (368)
...+|++|+++++++|++||+++|+||+|+|| |+|..++++++++.||++++||++++| +|+|.+++++++++.+..
T Consensus 239 ~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~- 317 (442)
T TIGR03372 239 VILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD- 317 (442)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc-
Confidence 99999999999999999999999999999999 999988999999999999999999999 699999999999888742
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
+.+.+++||++|++++++++++++.++++++.++.++..+++++.|+++..+++ ....+++.|.++++++..
T Consensus 318 ~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~------- 390 (442)
T TIGR03372 318 NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRD------- 390 (442)
T ss_pred cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCC-------
Confidence 245678999999999999999999998888999999999999999999877776 556888999999999852
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHH
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l 365 (368)
......+.+.|+++||++.+.+. ..+ .|++.++++|+++++++|++++
T Consensus 391 ------~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 391 ------NEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ------hHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 22346789999999999976532 233 4789999999999999999864
No 10
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-48 Score=355.83 Aligned_cols=343 Identities=25% Similarity=0.353 Sum_probs=291.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC---Cce
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG---RER 77 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~---~~~ 77 (368)
++++||++|+|.+++.+++++...+ +++++...+|+++|++..+ +.+.++|++||++|++.|+++++.+++ +.+
T Consensus 93 ~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ 172 (459)
T PRK11522 93 IFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFT 172 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcE
Confidence 5789999999999999999885433 3568889999999999987 478999999999999999999998874 568
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCC
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g 154 (368)
||.+.++|||.+...+..++.......+. .. .+.+..+|++|.+++++.+.. +.++++++++||+++++|
T Consensus 173 ii~~~~~yHG~t~~~ls~~~~~~~~~~~~--~~-----~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G 245 (459)
T PRK11522 173 FIATSGAFHGKSLGALSATAKSTFRKPFM--PL-----LPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGG 245 (459)
T ss_pred EEEecCCCCCCcHHHhhhcCCcccccCCC--CC-----CCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCC
Confidence 99999999999998888876543221111 11 124566788899999998863 345789999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~ 232 (368)
.+.+|++|++++.++|++||+++|+||+|+|| |+|..+.++++++.||++++||++++| +|+|.+++++++++.+..
T Consensus 246 ~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~- 324 (459)
T PRK11522 246 VILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD- 324 (459)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc-
Confidence 99999999999999999999999999999999 999988999999999999999999999 699999999998887652
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
+++.+++||++|++++++++++++.++++++.++++++.++++++|+++..+++ .+..+++.|.++++++..
T Consensus 325 ~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~------- 397 (459)
T PRK11522 325 NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD------- 397 (459)
T ss_pred CCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC-------
Confidence 245688999999999999999999998888999999999999999999877776 566888999999999852
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCC--CCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQ--FEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......+.+.|+++||.+.+.+ ... +.|++.++++|+++++++|++++.+
T Consensus 398 ------~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 398 ------NEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred ------chHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 2234678999999999998652 223 3478999999999999999998864
No 11
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=2e-47 Score=351.46 Aligned_cols=365 Identities=64% Similarity=1.034 Sum_probs=298.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
..++||++|++.+++.+++++...++++.+...+|++++++.+++.+.+++++||++|++.|+++++.++++++||.+++
T Consensus 61 ~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~ 140 (426)
T PRK00062 61 PMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEG 140 (426)
T ss_pred hhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 46899999999999999998866556778889999999999887678999999999999999999998888899999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||.+.......+........+...+.........+.++++|++++++.+..++++++++++||+++++|.+.++++|+
T Consensus 141 ~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l 220 (426)
T PRK00062 141 CYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFL 220 (426)
T ss_pred ccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHH
Confidence 99999876666544322111111111111111123566778899999999976556899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||+++|+||+|+|++.|..+..+++++.||+.++||++++|+|+|++++++++++.+...+...+++|+++
T Consensus 221 ~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~ 300 (426)
T PRK00062 221 EGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSG 300 (426)
T ss_pred HHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcC
Confidence 99999999999999999999998666666777889999999999999989999999999999998864444567788999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
++++++++.++++.++++++.++++++.++++++|+++..+++....+++.|.++.+.+....+......+.++......
T Consensus 301 ~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 380 (426)
T PRK00062 301 NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFAR 380 (426)
T ss_pred CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHH
Confidence 99999999999999987789999999999999999998877887777889999999998753322111111122233468
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.+.|+++||.+.+.+.+.+++++.++++|+++++++|++++.++
T Consensus 381 i~~~l~~~Gv~v~~~~~~~~~~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 381 FFHAMLDEGVYLAPSQFEAGFVSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHCCeEeecCCcCceeeeccCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999987666667788999999999999999998753
No 12
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-48 Score=354.52 Aligned_cols=364 Identities=23% Similarity=0.293 Sum_probs=291.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+++||++|+|.+++.++++++.. ..+.++...+|+++|.+..+ +.++++|++||++|++.|+++++.++++.+||.
T Consensus 64 ~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~ 143 (451)
T PRK06062 64 NTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLS 143 (451)
T ss_pred hhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEE
Confidence 568999999999999999998543 34567889999999999997 478999999999999999999999999999999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC---CC-------HHHHHHHHHcC-CCCeEEEEEccc
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---ND-------VSALENLFENN-KGEIAAIILEPV 149 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d-------~~~le~~~~~~-~~~~~~~~~~~~ 149 (368)
+.++|||.+..++..++........+...++.....+..+..++ +| +++++++++.. +++++++++||+
T Consensus 144 ~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv 223 (451)
T PRK06062 144 AYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESV 223 (451)
T ss_pred EeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccc
Confidence 99999999999888876543211111111221111111222222 23 67888888643 367999999999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-cceeeeehHHHHH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIME 227 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~v~~~~~~~~ 227 (368)
++++|.+.++++|+++++++|++||++||+||+++|| |+|..++++++++.||++++||++++|+ |+|.+++++++++
T Consensus 224 ~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~ 303 (451)
T PRK06062 224 PGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAA 303 (451)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHH
Confidence 9999999999999999999999999999999999999 9998888999999999999999999995 9999999999998
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHH-HHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT-GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.+.. ..+.+++||++|++++++++++++.++++++.++..+.. +++++.|+++..+++.+..+.+.|.++++++....
T Consensus 304 ~~~~-~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~ 382 (451)
T PRK06062 304 TFAD-RPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADR 382 (451)
T ss_pred Hhcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccc
Confidence 8863 234577899999999999999999998888999999998 69999999987777777789999999999986421
Q ss_pred C-cccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 307 V-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 307 ~-~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
. ................+.+.|+++||++.+.+.. .+.+++.++++|++++++++++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 383 ETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred cccCCCcccchhhHHHHHHHHHHHHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 1 0000000001123567889999999998765322 234678999999999999999998653
No 13
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-47 Score=323.86 Aligned_cols=352 Identities=27% Similarity=0.319 Sum_probs=305.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
..++||.+|+|.+++.+++....+ ..+.+++..++++.|.+.++ +.+.++|+|||+||+++|+++++.|++.-++|.
T Consensus 61 tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa 140 (442)
T KOG1404|consen 61 TVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIA 140 (442)
T ss_pred EEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEE
Confidence 568999999999999999977533 35678999999999999998 689999999999999999999999999999999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCCC----------HHHHHHHHHc-CCCCeEEEEEcc
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFND----------VSALENLFEN-NKGEIAAIILEP 148 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d----------~~~le~~~~~-~~~~~~~~~~~~ 148 (368)
+..+|||.+...+.+++.+..+..++.. .+..+...++.+..++.+ .+++++.+.. .+.+++++++|+
T Consensus 141 ~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEt 220 (442)
T KOG1404|consen 141 RRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAET 220 (442)
T ss_pred eeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeeh
Confidence 9999999999999999887776666665 366666677777766642 3566666653 456799999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
+.+.+|++.+|+.|++++.++|+++|.++|.||+++|| |+|..+.++..++.||++|++|++|+|+++|.++.++++++
T Consensus 221 IqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~ 300 (442)
T KOG1404|consen 221 IQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIAD 300 (442)
T ss_pred hccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHH
Confidence 99999999999999999999999999999999999999 99998999999999999999999999999999999999999
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+.+. ..+++||++||++++++.++++.+.++.+.++......++++.|.++..+++.+-.+++.|.|+++++.+...
T Consensus 301 v~~~~--~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~ 378 (442)
T KOG1404|consen 301 VLNQK--SSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS 378 (442)
T ss_pred HHHhc--cccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC
Confidence 98853 2388999999999999999999999999999999999999999999999999888999999999999976543
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCCC--cc--ccccCCCHHHHHHHHHHH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--AG--FTSLAHSSDDIQHTITAA 361 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--~~--~~~~~~~~~~i~~~~~~l 361 (368)
..++|.......+-+.+++.|+.|.-++.. .+ .|++++|++|++-+++..
T Consensus 379 ----~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 379 ----EPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ----CCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 334455555677889999999999666422 23 368999999997777744
No 14
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-47 Score=353.27 Aligned_cols=360 Identities=22% Similarity=0.242 Sum_probs=288.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC----CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|+|.+++.+++++... ++++++...+|+++|.+..+ +.++++|++||++|++.|+++++.+
T Consensus 57 ~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~ 136 (459)
T PRK05965 57 CVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGR 136 (459)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCC
Confidence 568999999999999999988542 24567888999999999997 6789999999999999999999987
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCC-CC--------HHHHHHHHHcC-CCCe
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF-ND--------VSALENLFENN-KGEI 141 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~d--------~~~le~~~~~~-~~~~ 141 (368)
+++.+||.+.++|||.+..++..++.+.....+ +...+......+..+..+. +| ++++++.+.++ ++++
T Consensus 137 ~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~i 216 (459)
T PRK05965 137 PSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNV 216 (459)
T ss_pred CCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCce
Confidence 347789999999999998777776653222211 1111111000000111111 12 36788888753 3689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v 219 (368)
+++++||+.+++|.+.+|++|+++++++|++||++||+||+++|| |+|..++++++++.||+++++|++++| +|+|.+
T Consensus 217 AAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av 296 (459)
T PRK05965 217 AAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAV 296 (459)
T ss_pred EEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEE
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999 599999
Q ss_pred eehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 220 GGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 220 ~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
++++++++.+... +.+.+++||++|++++++++++++.++++++.++.++..+++++.|+++. +++.+..+++.|
T Consensus 297 ~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~G 375 (459)
T PRK05965 297 LMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRG 375 (459)
T ss_pred EEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecc
Confidence 9999998887532 13468899999999999999999999989999999999999999999874 567777899999
Q ss_pred ceEEEEeecCCC-cccchhcccccHHHHHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++++++..... ... ..+.......+.+.++++|+++.+.+... +.|++.++++|+++++++|++++.+
T Consensus 376 l~~gie~~~~~~~~~~---~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 376 LLGALELVADKATKTP---FDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred eEEEEEEeccccccCC---CCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 999999864211 000 00111235678889999999998866443 3578999999999999999999865
No 15
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=1.4e-47 Score=353.24 Aligned_cols=361 Identities=22% Similarity=0.290 Sum_probs=291.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc------CC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~------~~ 75 (368)
.+++||++|+|.+++.+++++...+ .++++...+|++.|.+..+..+.++|++||++|++.|+++++.++ ++
T Consensus 58 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r 137 (451)
T PRK07678 58 CVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHR 137 (451)
T ss_pred hhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3679999999999999999986433 356788899999999998866799999999999999999999874 46
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCC------CC---HHHHHHHHH-cCCCCeEEE
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF------ND---VSALENLFE-NNKGEIAAI 144 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~d---~~~le~~~~-~~~~~~~~~ 144 (368)
.+||.+.++|||.+..++..++.......+ +...++.....+.....++ +| ++.+++.+. +++++++++
T Consensus 138 ~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAv 217 (451)
T PRK07678 138 YKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAV 217 (451)
T ss_pred cEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 789999999999999888887654332222 2222222222222333322 12 344677775 445789999
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeeh
Q 017633 145 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGR 222 (368)
Q Consensus 145 ~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~ 222 (368)
++||+.+++|.+.++++|+++++++|++||++||+||+++|| |+|+.+.++++++.||++++||++++| +|+|.++++
T Consensus 218 i~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~ 297 (451)
T PRK07678 218 IMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVK 297 (451)
T ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEc
Confidence 999999999999999999999999999999999999999999 999888889999999999999999988 699999999
Q ss_pred HHHHHHhcCC---CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEE
Q 017633 223 RDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 299 (368)
Q Consensus 223 ~~~~~~~~~~---~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (368)
+++++.+... +.+.+++||++|++++++++++++.++++++.++.++..+++++.|+++..+++.+..+.+.|.+++
T Consensus 298 ~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~ 377 (451)
T PRK07678 298 KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVG 377 (451)
T ss_pred HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEE
Confidence 9998887642 2346889999999999999999999988889999999999999999988778888888999999999
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------Cc--cccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EA--GFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~--~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+++...... ....+......+.+.|+++||++.+.+. .. +.+++.+|++|++++++++++++.++
T Consensus 378 i~~~~~~~~----~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 378 IELVNDKET----KEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEecCCcc----cCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 998643210 0011223457889999999999976431 22 34678999999999999999998764
No 16
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-47 Score=352.36 Aligned_cols=362 Identities=19% Similarity=0.199 Sum_probs=288.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC----CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|+|.+++.+++++..+ .+++++...+|++.|++..+ +.++++|++||++|++.|+++++.+
T Consensus 61 ~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~ 140 (461)
T PRK07482 61 CVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGR 140 (461)
T ss_pred hhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 578999999999999999998642 24678899999999999997 5789999999999999999999866
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC----------CCCHHHHHHHHHc-CCCC
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP----------FNDVSALENLFEN-NKGE 140 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~d~~~le~~~~~-~~~~ 140 (368)
+++.+||.+.++|||.+..++..++.......+ +...++.....+.....+ ..+++++++.+.+ ++++
T Consensus 141 ~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 220 (461)
T PRK07482 141 PEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDT 220 (461)
T ss_pred CCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 246789999999999988877777653222111 111111111001110100 0146788888853 4568
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-ccee
Q 017633 141 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGA 218 (368)
Q Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~ 218 (368)
++++++||+.+++|.+.++++|+++|+++|++||+++|+||+++|| |+|..++++++++.||+++++|+++||+ |+|.
T Consensus 221 iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~a 300 (461)
T PRK07482 221 IAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSG 300 (461)
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccce
Confidence 9999999999999999999999999999999999999999999999 9999999999999999999999999995 9999
Q ss_pred eeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 219 YGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 219 v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
+++++++++.+... +...+++||++|++++++++++++.++++++.++.++..+++++.|+++..+++.+..+++.
T Consensus 301 v~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~ 380 (461)
T PRK07482 301 SIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGV 380 (461)
T ss_pred eeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Confidence 99999988877531 23468899999999999999999999989999999999999999999988888888899999
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC--CCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS--QFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
|.++++++....... ....+.......+...|+++|+++.+. +.. .+.|++.++++|++++++++++++.+
T Consensus 381 Glm~giel~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 381 GMLAAVEFVADRDDR--TPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred eeEEEEEeccCCCcC--CCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999996422100 000011123467889999999998653 222 23468999999999999999999865
No 17
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-47 Score=349.54 Aligned_cols=362 Identities=24% Similarity=0.266 Sum_probs=291.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC----CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhc----
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFT---- 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~---- 73 (368)
++++||++|+|.+++.+++++..++ +++++...+++++|.+..+ +.++++|++||++|++.|+++++.+.
T Consensus 53 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g 132 (449)
T PRK07481 53 NVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRG 132 (449)
T ss_pred hhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcC
Confidence 4679999999999999999885432 4678899999999999984 56899999999999999999999873
Q ss_pred --CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCC--CHHH--------HHHHHH-cCCC
Q 017633 74 --GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN--DVSA--------LENLFE-NNKG 139 (368)
Q Consensus 74 --~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--d~~~--------le~~~~-~~~~ 139 (368)
++.+||.+.++|||.+..++..++.......+ +...++.....+..+..+++ |.++ +|+.+. ++++
T Consensus 133 ~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~ 212 (449)
T PRK07481 133 QPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPD 212 (449)
T ss_pred CCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 56789999999999998888776654322211 22223332222233333444 4443 445554 3457
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccce
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVG 217 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG 217 (368)
++++|++||+.+++|.+.++++|+++++++|++||+++|.||+++|| |+|..++++++++.||++++||++++| +|+|
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~ 292 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLG 292 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCce
Confidence 89999999999999999999999999999999999999999999999 999988899999999999999999999 5999
Q ss_pred eeeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 017633 218 AYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 218 ~v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
.+++++++++.+... +...+++|+++|++++++++++++.++++++.++.++..+++++.|+++..+++.+..+++
T Consensus 293 av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 372 (449)
T PRK07481 293 ATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRG 372 (449)
T ss_pred EEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence 999999998887532 2346889999999999999999999988889999999999999999998777788889999
Q ss_pred ccceEEEEeecCC-CcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 294 ISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.|.++++++.... .... ..+.......+...|+++||++.+.+.. .+.+++.+|++|+++++++|++++.++
T Consensus 373 ~Glm~gi~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 373 KGLMLALDLVADKATREP---IDPSKGYANAVADVARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred cceEEEEEecccccccCC---CCchhHHHHHHHHHHHhCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999985321 1100 0001233567888999999999886533 245678999999999999999998764
No 18
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-47 Score=345.13 Aligned_cols=348 Identities=28% Similarity=0.363 Sum_probs=285.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++++.... .++++...++++++.+..++ .++++|++||++|++.|+++++.++++.+|
T Consensus 51 ~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~i 130 (425)
T PRK07495 51 VVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAV 130 (425)
T ss_pred hhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeE
Confidence 4679999999999999999885432 45678889999999999874 379999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCC----------CHHHHHHHHHc--CCCCeEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFN----------DVSALENLFEN--NKGEIAAII 145 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------d~~~le~~~~~--~~~~~~~~~ 145 (368)
+.+.++|||.+...+..++.. .....+.+. ...+..+|.+ +++++++.+.+ +++++++++
T Consensus 131 i~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (425)
T PRK07495 131 IAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM-------MPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAII 203 (425)
T ss_pred EEECCCcCCccHHHhhhcCCCcccccCCCCC-------CCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEE
Confidence 999999999988777766532 111111110 0122333332 25566777763 346799999
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHH
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~ 224 (368)
+||+.+++|...+|++|+++|+++|++||+++|+||+|+|| +.|..++++.+++.||++++||++++|+|+|+++++++
T Consensus 204 ~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~ 283 (425)
T PRK07495 204 IEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAE 283 (425)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCccceEEEEcHH
Confidence 99999998888999999999999999999999999999999 88888888889999999999999999999999999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+++.+.. ..+++|+++++++++++.++++.++++++.++++++.++++++|+++..+++....+.+.|.++|+++..
T Consensus 284 i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~ 360 (425)
T PRK07495 284 IMDAPGP---GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFND 360 (425)
T ss_pred HHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEec
Confidence 9888763 3467899999999999999999998888999999999999999999877777777888999999999864
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
... ..++......+.+.++++|+++.+.+. .. +.|++.++++++++++++|++++.+
T Consensus 361 ~~~------~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 361 ADS------GLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred CCC------CCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 211 112223456788999999999976432 33 3578999999999999999999865
No 19
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=6.6e-47 Score=345.77 Aligned_cols=340 Identities=28% Similarity=0.348 Sum_probs=285.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc------CC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~------~~ 75 (368)
++++||++|+|.+++.+++++... .+++++...+|+++|++..+ .+++++++||++|++.|+++++.+. ++
T Consensus 46 ~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r 124 (397)
T TIGR03246 46 VNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATF-ADKVFFCNSGAEANEAALKLARRYALDKHGADK 124 (397)
T ss_pred hccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 578999999999999999987432 24467888999999999874 4699999999999999999998773 67
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
++||.++++|||++...+..++.......+. .....+..++++|++++++.+. ++++++++||+++++|.
T Consensus 125 ~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epi~~~~G~ 194 (397)
T TIGR03246 125 SEIVAFKNSFHGRTLFTVSVGGQPKYSQGFA-------PLPGGIKHAPYNDLAAAKALIS---DKTCAVIVEPIQGEGGV 194 (397)
T ss_pred CEEEEECCCcCCccHHHHHhcCCcccccCCC-------CCCCceEEeCCCCHHHHHHHhc---cCeEEEEEecccCCCCC
Confidence 8899999999999887777766533221111 1123456788889999999996 47999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
..++++|+++|+++|++||+++|+||+|+|| +.|..++.+++++.||++++||++++|+|+|++++++++++.+..
T Consensus 195 ~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG~pigav~~~~~i~~~~~~--- 271 (397)
T TIGR03246 195 VPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLKV--- 271 (397)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCCcceeEEEEcHHHHHhccC---
Confidence 9999999999999999999999999999999 888887778899999999999999989999999999999888863
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..+++|++++++++++++++++.++++++.++++++.++++++|+++..+.+....+++.|.++.+.+...
T Consensus 272 ~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~--------- 342 (397)
T TIGR03246 272 GTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA--------- 342 (397)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc---------
Confidence 34678889999999999999998877889999999999999999998766666667778888888876421
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.......+++.|+++|+.+.+.+.+.++ +++.++++|+++++++|++++.++
T Consensus 343 --~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 343 --YQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred --hhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1124578999999999999887655555 589999999999999999998753
No 20
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=3.8e-46 Score=342.74 Aligned_cols=357 Identities=29% Similarity=0.409 Sum_probs=288.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|+|.+++.++++++..++.+++...+++|.+.+..+ .++++|++|||+|++.|+++++.++++++|+.+.+
T Consensus 86 ~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~-~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g 164 (453)
T PRK07046 86 GAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG-LPYWQVATTATDANRFVLRWARAVTGRPKILVFNG 164 (453)
T ss_pred ccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 46799999999999999999877777889999999999999884 78999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhc--CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 84 CYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+|||.+...+... +.... .+...+.+......+..++++|++++++.+. .++++++++||+.+++|.+.++++
T Consensus 165 ~YHG~~d~~l~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~ 239 (453)
T PRK07046 165 CYHGTVDDVFVDLVDGRPVQ---RPGLLGQVHDLTATTRVVEFNDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPG 239 (453)
T ss_pred CCCCCcHHhHhhccCCCCCC---CCCCCCCCccccCceEeeCCCCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHH
Confidence 9999876544332 21111 1112222222234466788899999999995 357999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC------CCCc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP------AGPM 235 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~------~~~~ 235 (368)
|+++++++|++||+++|+||+++ |+.|......++++.||+++++|+++||+|+|.+++++++++.+.. .+..
T Consensus 240 fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~ 318 (453)
T PRK07046 240 FHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHS 318 (453)
T ss_pred HHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCc
Confidence 99999999999999999999998 6434334456789999999999999999999999999999888753 1234
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
.+++||++|++++++++++++.+.++++.+++.+..++++++|+++..+.+.+..+.+.|.++.+.+......++.+...
T Consensus 319 ~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~ 398 (453)
T PRK07046 319 GIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAA 398 (453)
T ss_pred eeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhc
Confidence 57789999999999999999999888899999999999999999988888888889999998888775433222222111
Q ss_pred c-ccHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 316 S-ETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 316 ~-~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+ +......+...|+++||++.+.+. .++++..++++|++++++++++++.++
T Consensus 399 ~~~~~~~~~~~~~~~~~Gv~~~~~~~-~~~~~p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 399 ALDPELEAALHLYLLNRGVLITPFHN-MMLVCPATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred ccCHHHHHHHHHHHHHCCCEEecccC-cEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 223356788889999999987542 334444699999999999999998753
No 21
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1e-46 Score=347.72 Aligned_cols=362 Identities=18% Similarity=0.255 Sum_probs=290.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
..++||++|+|.+++.+++++... .++.++...+|+++|++..+ +.+.++|++||++|++.|+++++.+ +
T Consensus 58 ~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t 137 (466)
T PRK07030 58 VNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKP 137 (466)
T ss_pred hhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 567999999999999999988532 25678899999999999987 6789999999999999999999876 4
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC---------CCCHHHHHHHHHcCCCCeEE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP---------FNDVSALENLFENNKGEIAA 143 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~d~~~le~~~~~~~~~~~~ 143 (368)
++.+||.+.++|||.+..++..++.......+ |...++.....+.....+ .++++++++.+.++++++++
T Consensus 138 ~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAA 217 (466)
T PRK07030 138 RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAA 217 (466)
T ss_pred CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 57789999999999999888877654322221 111111111111111111 12467788888876789999
Q ss_pred EEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeee
Q 017633 144 IILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYG 220 (368)
Q Consensus 144 ~~~~~-~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~ 220 (368)
+++|| +.+.+|.+.++++|+++++++|++||+++|+||+++|| |+|..++++++++.||+++++|+++|| +|+|.++
T Consensus 218 vi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~ 297 (466)
T PRK07030 218 VIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVL 297 (466)
T ss_pred EEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEE
Confidence 99999 69999999999999999999999999999999999999 999999999999999999999999999 5999999
Q ss_pred ehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 221 GRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 221 ~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
+++++++.+... +...+++||++|+++++++.++++.++++++.++.++..+++++.|+++. +++.+..+++.|.
T Consensus 298 ~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl 376 (466)
T PRK07030 298 TTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHPHVAEVRQTGM 376 (466)
T ss_pred ecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEEeEecee
Confidence 999998877421 23568899999999999999999999989999999999999999999874 5677778999999
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++++++....... ............+.+.++++|+++.+.+.. .+.|++.++++|+++++++++++++++
T Consensus 377 ~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 377 ILAIEMVQDKASK--TPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEEEEeccCcccc--ccCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999986432110 000001112357889999999999886532 235689999999999999999998763
No 22
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-46 Score=345.91 Aligned_cols=350 Identities=25% Similarity=0.375 Sum_probs=281.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++++..++ ..+++...++++++++.+++ .+.++|++||++|++.|+++++.++++++|
T Consensus 67 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~i 146 (443)
T PRK06058 67 VTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAV 146 (443)
T ss_pred hhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeE
Confidence 5789999999999999999875432 24578889999999999873 369999999999999999999999899999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccCCCC---------------HHHHHHHHHcCCCCe
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFND---------------VSALENLFENNKGEI 141 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d---------------~~~le~~~~~~~~~~ 141 (368)
|.+.++|||.+..++..++... ....+ +....+... ....++++ ++.+++.+ .++++
T Consensus 147 i~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i 220 (443)
T PRK06058 147 VVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA----PMSYPYRDPKGLATDGEEAAARAITVIEKQV--GADNL 220 (443)
T ss_pred EEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc----CCCcccccccccccchHHHHHHHHHHHHHhh--CCCce
Confidence 9999999999998888765321 11111 000111000 00011111 12233333 23689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYG 220 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~ 220 (368)
+++++||+++++|.+.++++|+++|+++|++||+++|+||+++|| |+|..++.+++++.||++++||++++|+|+|+++
T Consensus 221 Aavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~ 300 (443)
T PRK06058 221 AAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGLPLSAVT 300 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCCccEEEE
Confidence 999999999999999999999999999999999999999999999 9998888899999999999999999999999999
Q ss_pred ehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 221 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
+++++++.+.. ..+++|+++|+++++++.++++.+.++++.++..++.++++++|+++..+++.+..+.+.|.++++
T Consensus 301 ~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i 377 (443)
T PRK06058 301 GRAEIMDAPHP---GGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAI 377 (443)
T ss_pred EcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEE
Confidence 99999888763 347799999999999999999999888999999999999999999987777777789999999999
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++..... +.++......+.+.|+++||.+.+++. +.+ .|++.++++++++++++|++++.++
T Consensus 378 ~~~~~~~------~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 378 ELVKPGT------TEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EEecCCC------CCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 9864311 011223456788889999999987542 233 4689999999999999999999764
No 23
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-46 Score=345.18 Aligned_cols=355 Identities=21% Similarity=0.241 Sum_probs=287.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCCC-CCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
.+++||++|+|.+++.+++++... .+++++...+|++.+++..++ .+.++|++||++|++.|+++++.+ +
T Consensus 65 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~ 144 (453)
T PRK06943 65 VNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRG 144 (453)
T ss_pred HhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 568999999999999999988532 246788999999999999874 579999999999999999999654 3
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC---------CCCHHHHHHHHHcCCCCeEE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP---------FNDVSALENLFENNKGEIAA 143 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~d~~~le~~~~~~~~~~~~ 143 (368)
++.+||.+.++|||.+..++..++.......+ +...+......+.....+ .++++++++.+.++++++++
T Consensus 145 ~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAA 224 (453)
T PRK06943 145 DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAA 224 (453)
T ss_pred CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 57889999999999998888887754322222 111111111111111111 12468888888877779999
Q ss_pred EEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeee
Q 017633 144 IILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYG 220 (368)
Q Consensus 144 ~~~~~~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~ 220 (368)
+++||. .+++|.+.++++|++++.++|++||+++|.||+++|| |+|..++++++++.||+++++|++++| +|+|.++
T Consensus 225 viiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~ 304 (453)
T PRK06943 225 LIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVL 304 (453)
T ss_pred EEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEE
Confidence 999994 8999999999999999999999999999999999999 999999999999999999999999999 5999999
Q ss_pred ehHHHHHHhcCC---CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 221 GRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 221 ~~~~~~~~~~~~---~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
+++++.+.+... ..+.+++||++|++++++++++++.++++++.++..+..+++++.|+++. +.+....+++.|.+
T Consensus 305 ~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~ 383 (453)
T PRK06943 305 SRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTI 383 (453)
T ss_pred EcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccE
Confidence 999998887532 13457899999999999999999999988999999999999999999874 45555588999999
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++++.... .+.......+.+.++++||++.+.+.. .+.|++.++++|+++++++|++++.+
T Consensus 384 ~gvel~~~~--------~~~~~~~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 384 FAFDVALDG--------DAARTFSRRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred EEEEEccCC--------CcchHHHHHHHHHHHHCCcEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 999986321 011223567889999999999876532 23468999999999999999999865
No 24
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=2e-46 Score=347.70 Aligned_cols=361 Identities=23% Similarity=0.260 Sum_probs=284.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC----CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHh-----
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAF----- 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~----- 72 (368)
++++||++|+|++++.+++++...+ +.+++...+|+++|.+.++ +.+.++|++||++|++.|+++++.+
T Consensus 100 ~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g 179 (504)
T PLN02760 100 CTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALG 179 (504)
T ss_pred hcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcC
Confidence 5799999999999999999885432 3567889999999999864 4578999999999999999999866
Q ss_pred -cCCceEEEEcCCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccc--cCCC--------CHHHHHHHHH-cCCC
Q 017633 73 -TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLT--APFN--------DVSALENLFE-NNKG 139 (368)
Q Consensus 73 -~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~--------d~~~le~~~~-~~~~ 139 (368)
+++.+||.+.++|||.+..++.+++.+.....+. ....+.+...+..+. ++.. ..+++++.+. ++++
T Consensus 180 ~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~ 259 (504)
T PLN02760 180 RPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPE 259 (504)
T ss_pred CCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 2467899999999999888877776533211111 111111111111111 1111 1346777774 3456
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccce
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVG 217 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG 217 (368)
+++++++||+.+++|.+.+|++|+++|+++|++||++||+||+++|| |+|..++++++++.||+++|||++++| +|+|
T Consensus 260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~Pig 339 (504)
T PLN02760 260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIG 339 (504)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccc
Confidence 89999999999999999999999999999999999999999999999 999999999999999999999999988 5999
Q ss_pred eeeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 017633 218 AYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 218 ~v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
.+++++++++.+... +...+++||++||+++++++++++.++++++.++++++.+++++.|+++ .+.+.+..+++
T Consensus 340 Av~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG 418 (504)
T PLN02760 340 AVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRG 418 (504)
T ss_pred eEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEe
Confidence 999999999887532 2346789999999999999999999988899999999999999999987 66777778999
Q ss_pred ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.|.++++++...... .....++......+.+.|+++||.+.+.+.. .+.+++.++++|++++++++++++.+
T Consensus 419 ~Gl~~gie~~~~~~~--~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 419 TGLILGTEFVDNKSP--NDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred CceEEEEEEecCCcc--cccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998643210 0000011223567889999999999876533 23467899999999999999999864
No 25
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-46 Score=343.68 Aligned_cols=362 Identities=23% Similarity=0.266 Sum_probs=287.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--C-CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~-~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
++++||++|+|.+++.+++++... . .+.++...+|++.|++..+ +.++++|++||++|++.|+++++.+ +
T Consensus 41 ~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~ 120 (443)
T PRK07483 41 VSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQP 120 (443)
T ss_pred hhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999988532 1 2567888999999999987 5789999999999999999999987 5
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCC-C---------CHHHHHHHHH-cCCCCe
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF-N---------DVSALENLFE-NNKGEI 141 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~---------d~~~le~~~~-~~~~~~ 141 (368)
++.+||.+.++|||.+..++..++.......+ +...+.........+..+. . .++++++.+. .+++++
T Consensus 121 ~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 200 (443)
T PRK07483 121 QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTV 200 (443)
T ss_pred CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCce
Confidence 67789999999999999888887764332222 1111111000000000000 0 1356777664 345689
Q ss_pred EEEEEcccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-ccee
Q 017633 142 AAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGA 218 (368)
Q Consensus 142 ~~~~~~~~~~-~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~ 218 (368)
+++++||+.+ .+|.+.++++|+++++++|++||+++|+||+++|| |+|..++++++++.||+++++|++++|+ |+|.
T Consensus 201 AAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~a 280 (443)
T PRK07483 201 AAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGA 280 (443)
T ss_pred EEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEE
Confidence 9999999997 57999999999999999999999999999999999 9999999999999999999999999995 9999
Q ss_pred eeehHHHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 219 YGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 219 v~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
+++++++.+.+... +.+.+++||++|++++++++++++.++++++.++..+..+++++.|+++..+++.+..+++.|.+
T Consensus 281 v~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm 360 (443)
T PRK07483 281 VLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLF 360 (443)
T ss_pred EEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccE
Confidence 99999998887632 23458899999999999999999999989999999999999999999987778877899999999
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++++....... ....+.......+.+.++++|+++.+.+. .. +.|+++++++|+++++++|++++.+
T Consensus 361 ~gie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 361 VGVELVADRATK--APFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEEeeccccc--CCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999986432100 00001112356788999999999976431 22 3478999999999999999999865
No 26
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.4e-46 Score=339.73 Aligned_cols=341 Identities=25% Similarity=0.319 Sum_probs=286.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc-------C
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-------G 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-------~ 74 (368)
.+++||++|+|.+++.+++++....+ +.++...++.+.|.+..+..+.++|++||++|++.|+++++.+. +
T Consensus 51 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~ 130 (408)
T PRK04612 51 VCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPAD 130 (408)
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCC
Confidence 57899999999999999998754432 45788899999999988756899999999999999999999872 2
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+.+|+.+.++|||.+..++..++.+.....+.. ....+..++++|++.+++.+. ++++++++++|+++++|
T Consensus 131 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~l~~~~~--~~~~aavi~eP~~~~gg 201 (408)
T PRK04612 131 KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP-------LPGGFRYVDFNDVEALEAAMA--GGDVAAVMLEPIQGEGG 201 (408)
T ss_pred CcEEEEECCCcCCccHHHHHhcCCcccccCCCC-------CCCCceEcCCCCHHHHHHhhC--CCCEEEEEECCccCCCC
Confidence 457999999999999988887765432222211 112345567789999999886 35899999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
...++++|+++|+++|++||+++|+||+|++| +.|..+....+++.||+.+|||++++|+|+|++++++++++.+..
T Consensus 202 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~-- 279 (408)
T PRK04612 202 VMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQF-- 279 (408)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcC--
Confidence 88888999999999999999999999999999 888766666778899999999999999999999999888887763
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
..+++|+++++++++++.++++.++++++.+++.++.++++++|+++..+++....+.+.|.++++++...
T Consensus 280 -~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~-------- 350 (408)
T PRK04612 280 -GAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPA-------- 350 (408)
T ss_pred -CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCc--------
Confidence 34678899999999999999999988899999999999999999998877887788999999999998521
Q ss_pred cccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 314 KKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......++.+.|+++|+.+.+.+...+ .+++.++++|++++++++++++.+
T Consensus 351 ---~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 351 ---HAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ---hhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 122356788999999999988764444 468899999999999999999865
No 27
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.6e-46 Score=346.01 Aligned_cols=360 Identities=23% Similarity=0.320 Sum_probs=282.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCCC----CCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS----IEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~----~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
++++||++|+|.+++.+++++... .+++++...+|+++|.+..++ ...+++++||++|++.|+++++.++++.
T Consensus 50 ~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~ 129 (442)
T TIGR00709 50 TLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRT 129 (442)
T ss_pred hhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999987432 236778899999999999873 2446667999999999999999999999
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCC-----CH----HHHHHHHH---cCCCCeEE
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN-----DV----SALENLFE---NNKGEIAA 143 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----d~----~~le~~~~---~~~~~~~~ 143 (368)
+||.+.++|||.+..++..++.......+ +...++.....+..+..+++ +. +.+++.+. +.++++++
T Consensus 130 ~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 209 (442)
T TIGR00709 130 NVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAA 209 (442)
T ss_pred eEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEE
Confidence 99999999999999888887642211111 11112211112222222222 11 22444443 23357999
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeeh
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~ 222 (368)
+++||+++++|.+.+|++|+++++++|++||+++|.||+|+|| |+|..++++++++.||++++||++++|+|+|+++++
T Consensus 210 vi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~Pigav~~~ 289 (442)
T TIGR00709 210 VILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIA 289 (442)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCcccEEEEEc
Confidence 9999999999999999999999999999999999999999999 999888888999999999999999999999999998
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
++ ++.+. ...+++|+++|+++++++.++++.++++++.++.+++.+++++.|+++..+++.+..+++.|.++++++
T Consensus 290 ~~-~~~~~---~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~ 365 (442)
T TIGR00709 290 PE-FDAWQ---PAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMI 365 (442)
T ss_pred hH-HhccC---CCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEE
Confidence 87 45543 234779999999999999999999988899999999999999999998878888889999999999999
Q ss_pred ecCC-CcccchhcccccHHHHHHHHHHHHcCeeecCCCC--C--ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--E--AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~--~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.... ..+......++......+...++++|+++.+.+. . .+.|++.+|++|++++++++++++.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 366 VDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred ccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 6431 1111111111223456788899999999986542 2 24579999999999999999999864
No 28
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-46 Score=346.03 Aligned_cols=360 Identities=26% Similarity=0.356 Sum_probs=284.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC-C--CCCCChhHHHHHHHHHhhCCCC----CeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 4 LIILFPSYLQVLAALGETMKKGT-S--FGAPCLLENVLAEMVISAVPSI----EMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~-~--~~~~~~~~~~l~~~l~~~~~~~----~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.+++||++|+|.+++.+++.+.. . .+++++...++++.+.+..++. ..+++++||++|++.|+++++.++++.
T Consensus 69 ~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~ 148 (459)
T PRK06931 69 TLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRS 148 (459)
T ss_pred hccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999998632 2 2357788999999999998732 245777999999999999999999999
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCC-----CHHHH----HHHHHc---CCCCeEE
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN-----DVSAL----ENLFEN---NKGEIAA 143 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----d~~~l----e~~~~~---~~~~~~~ 143 (368)
+||.+.++|||.+..++..++.......+ +...++.....++.+..+++ +.+.+ ++.+.. .++++++
T Consensus 149 ~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAA 228 (459)
T PRK06931 149 NVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAA 228 (459)
T ss_pred eEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEE
Confidence 99999999999999988877653322212 11222222222233333332 23333 334432 3457999
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeeh
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~ 222 (368)
+++||+.+++|.+.++++|++++.++|++||+++|.||+++|| |+|..++++++++.||+++++|++++|+|+|.++.+
T Consensus 229 vI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~ 308 (459)
T PRK06931 229 VILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIK 308 (459)
T ss_pred EEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCcceeeeeeH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999998888
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
+++ +.+. ...+++||++|++++++++++++.++++++.++.++..+++++.|+++..+++.+..+.+.|.++++++
T Consensus 309 ~~~-~~~~---~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel 384 (459)
T PRK06931 309 KEF-DAWQ---PGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEI 384 (459)
T ss_pred HHH-hhcc---CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEE
Confidence 764 5553 345789999999999999999999988899999999999999999998888888889999999999999
Q ss_pred ecCC-CcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.... ..+.......+......+...++++|+++.+.+. .. +.|++.++++|++++++++++++.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 385 VDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred ccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 6431 1111111111223456788999999999987542 22 3478999999999999999999864
No 29
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.4e-46 Score=344.48 Aligned_cols=362 Identities=22% Similarity=0.280 Sum_probs=289.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC---CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
++++||++|+|.+++.+++++.. ..++.++...+|+++|++.++ +.+.++|++||++|++.|+++++.+ +
T Consensus 67 ~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~t 146 (460)
T PRK06916 67 LNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKP 146 (460)
T ss_pred HhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 46799999999999999999843 235678889999999999997 4689999999999999999999874 4
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCC---------CCHHHHHHHHHcCCCCeEE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF---------NDVSALENLFENNKGEIAA 143 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~d~~~le~~~~~~~~~~~~ 143 (368)
++.+||.+.++|||.+..++.+++.......+ +...+......+.....+. .+++++++.+.++++++++
T Consensus 147 gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAA 226 (460)
T PRK06916 147 KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAA 226 (460)
T ss_pred CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 57889999999999999888887654322222 1111111111111111111 1467788888877789999
Q ss_pred EEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeee
Q 017633 144 IILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYG 220 (368)
Q Consensus 144 ~~~~~-~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~ 220 (368)
+++|| +.+++|.+.++++|+++++++|++||+++|.||+++|| |+|..++++++++.||+++++|++++| +|+|.++
T Consensus 227 vi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~ 306 (460)
T PRK06916 227 IIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITV 306 (460)
T ss_pred EEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceee
Confidence 99999 69999999999999999999999999999999999999 999999999999999999999999999 5999999
Q ss_pred ehHHHHHHhcC----CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 221 GRRDIMEMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 221 ~~~~~~~~~~~----~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
+++++++.+.. .....+++|+++|++++++++++++.++++++.++++++.+++++.|+++. +.+.+..+.+.|.
T Consensus 307 ~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl 385 (460)
T PRK06916 307 TTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLF-ALKHVGDIRQLGL 385 (460)
T ss_pred ecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh-cCCCeEEeecCCc
Confidence 99999887642 123557889999999999999999999888899999999999999999874 4666678999999
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-cccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++++++...... .............+...++++||++.+.+... +.|++.++++|+++++++|++++.++
T Consensus 386 m~giel~~~~~~--~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 386 MVGIELVKNKET--KEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred eeeEEeeccccc--ccCCCchhhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 999998643210 00000111224678899999999999865322 35689999999999999999998753
No 30
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-46 Score=342.84 Aligned_cols=354 Identities=28% Similarity=0.343 Sum_probs=283.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+++||++|+|.+++.+++++.... .+..+...+|+++|++.++ +.+.++|++||++|++.|+++++.++++.+|+
T Consensus 54 ~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii 133 (433)
T PRK08117 54 VANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYII 133 (433)
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEE
Confidence 5789999999999999999875332 2467889999999999995 67899999999999999999999898899999
Q ss_pred EEcCCCCCCchhhhhhcCCC-ccccCC-CCCCCCCCCCCCccc---------ccCCCCHHHHHHHHHc--CCCCeEEEEE
Q 017633 80 KFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETL---------TAPFNDVSALENLFEN--NKGEIAAIIL 146 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---------~~~~~d~~~le~~~~~--~~~~~~~~~~ 146 (368)
.+.++|||.+...+...+.. .....+ +...++.....+... ....++++++++.+++ .+++++++++
T Consensus 134 ~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~ 213 (433)
T PRK08117 134 SFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVII 213 (433)
T ss_pred EECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEE
Confidence 99999999998887665431 111111 111111100000000 0111256778888764 3467999999
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHH
Q 017633 147 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 147 ~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~ 225 (368)
||+.+++|.+.++++|+++++++|++||++||+||+|+|| +.|..+..+++++.||+.++||++++|+|+|++++++++
T Consensus 214 Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i 293 (433)
T PRK08117 214 EPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKEL 293 (433)
T ss_pred CCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHH
Confidence 9999999999999999999999999999999999999999 888877778889999999999999999999999999999
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
++.+.. ..+++|+++|+++++++.++++.++++++.++++++.++++++|.++..+++....+++.|.++++++...
T Consensus 294 ~~~~~~---~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~ 370 (433)
T PRK08117 294 MEQWPL---GSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDP 370 (433)
T ss_pred HhhccC---CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecC
Confidence 888752 34778899999999999999999977889999999999999999998777776678889999999988643
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. ..++......+.+.|+++||.+.+.+. ..++ +++.++++++++++++|++++.+
T Consensus 371 ~-------~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 371 D-------GEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred C-------CCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 1 011233456788999999999876432 3333 56899999999999999999865
No 31
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-46 Score=342.23 Aligned_cols=356 Identities=22% Similarity=0.299 Sum_probs=284.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCCCC--CeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPSI--EMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++++.... +++++...++++.|++.+++. +.|+|++||++|++.|+++++.++++.+|
T Consensus 53 ~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~i 132 (445)
T PRK08593 53 SQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYI 132 (445)
T ss_pred hhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeE
Confidence 4679999999999999999885443 246788999999999999743 79999999999999999999999899999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccC--CCC-------HHHHHHHHHc--CCCCeEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAP--FND-------VSALENLFEN--NKGEIAAII 145 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~--~~d-------~~~le~~~~~--~~~~~~~~~ 145 (368)
|.+.++|||.+..++..++... ....+ +...++.....++....+ .++ ++++++.+.+ .++++++++
T Consensus 133 i~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI 212 (445)
T PRK08593 133 ISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIV 212 (445)
T ss_pred EEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 9999999999988887776421 11111 111111110111111100 011 2455555543 236899999
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHH
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~ 224 (368)
+||+.+++|.+.++++|+++++++|++||+++|+||+|+|| +.|..+..+++++.||++++||++++|+|+|+++++++
T Consensus 213 ~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~ 292 (445)
T PRK08593 213 IETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKE 292 (445)
T ss_pred EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHH
Confidence 99999999999999999999999999999999999999999 88887788889999999999999998999999999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+++.+.. ..+.+|++++++++++++++++.++++++.++.+++.+++++.|+++..+++.+..+++.|.++++++..
T Consensus 293 i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~ 369 (445)
T PRK08593 293 IMESLEA---PAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVS 369 (445)
T ss_pred HHhhhcc---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEec
Confidence 9988862 2356799999999999999999998888999999999999999999877788888999999999998864
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.... ..++......+...|+++||.+.+.+.+.+ .+++.++++|++++++++++++.+
T Consensus 370 ~~~~-----~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 370 DKKL-----KTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred CCCc-----CCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 2210 012233457789999999999977543443 478999999999999999998865
No 32
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.7e-46 Score=342.58 Aligned_cols=350 Identities=22% Similarity=0.282 Sum_probs=284.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh-----cC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-----TG 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~-----~~ 74 (368)
++++||++|+|.+++.+++++.... .++++...+|+++|++..+ +.+.++|++||++|++.|+++++.+ ++
T Consensus 54 ~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~ 133 (428)
T PRK07986 54 AAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEP 133 (428)
T ss_pred hhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999885432 3467889999999999997 4689999999999999999999987 46
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCc-cccCCCC-CCCCCCCCCCccc---ccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPD-SPGVPKGATYETL---TAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~---~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
+.+||.+.++|||.+..++...+... ....+.. ..+......+... ..+++|++++++.+++++++++++++||+
T Consensus 134 r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi 213 (428)
T PRK07986 134 RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPI 213 (428)
T ss_pred CcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEech
Confidence 78899999999999988887755321 1111111 1111000000000 01235788999999876678999999996
Q ss_pred -CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHH
Q 017633 150 -VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIM 226 (368)
Q Consensus 150 -~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~ 226 (368)
.+.+|.+.++++|+++|+++|++||++||+||+|+|| +.|..++++++++.||++++||+++|| +++|.++++++++
T Consensus 214 ~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~ 293 (428)
T PRK07986 214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVA 293 (428)
T ss_pred hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHH
Confidence 7778888999999999999999999999999999999 999888899999999999999999999 6999999999999
Q ss_pred HHhcCCC--CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 227 EMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 227 ~~~~~~~--~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+.+.... .+.+++||++|++++++++++++.++++++.++..++.+++++.|+++. +++....+++.|.++.+++..
T Consensus 294 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~ 372 (428)
T PRK07986 294 ETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLR-DAPMVADVRVLGAIGVVETTR 372 (428)
T ss_pred HHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccceEEEEEeCC
Confidence 9886421 2457889999999999999999999888899999999999999999864 355566788999999998742
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. .....+.+.|+++|+++.+.+.. .+.|++.++++|+++++++|++++.+
T Consensus 373 ~-------------~~~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 373 P-------------VNMAALQRFFVEQGVWIRPFGKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred c-------------ccHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 12467889999999999886532 23468999999999999999999853
No 33
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.8e-46 Score=342.44 Aligned_cols=361 Identities=23% Similarity=0.266 Sum_probs=285.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCCC------CCeEEEeCChHHHHHHHHHHHHHh--
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS------IEMVRFVNSGTEACMGVLRLARAF-- 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~------~~~v~~~~~gt~a~~~al~~~~~~-- 72 (368)
++++||++|+|.+++.+++++... .+++++...+|++.+.+..+. .+.++|++||++|++.|+++++.+
T Consensus 75 ~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~ 154 (472)
T PRK08742 75 TNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFH 154 (472)
T ss_pred hccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHH
Confidence 568999999999999999986432 246778899999999998863 579999999999999999999987
Q ss_pred ----cCCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCC---------CHHHHHHHHHcCC
Q 017633 73 ----TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN---------DVSALENLFENNK 138 (368)
Q Consensus 73 ----~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------d~~~le~~~~~~~ 138 (368)
+++.+||.+.++|||.+..++..++.......+ |...++.....++....+.. +++.+++.+.+++
T Consensus 155 ~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (472)
T PRK08742 155 NRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSP 234 (472)
T ss_pred hcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC
Confidence 346789999999999999888887654322222 11111111111111111111 3577788887666
Q ss_pred CCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-cc
Q 017633 139 GEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LP 215 (368)
Q Consensus 139 ~~~~~~~~~~-~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~ 215 (368)
++++++++|| +.+.+|.+.+|++|+++++++|++||++||.||+++|| |+|..++++++++.||+++++|+++|| +|
T Consensus 235 ~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~P 314 (472)
T PRK08742 235 GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLP 314 (472)
T ss_pred CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCC
Confidence 7899999999 58889999999999999999999999999999999999 999999999999999999999999999 49
Q ss_pred ceeeeehHHHHHHhcCC---CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 017633 216 VGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG 292 (368)
Q Consensus 216 iG~v~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 292 (368)
+|.+++++++++.+... +...+++||++|+++++++.++++.++++++.++.++..+++++.++.+ .+++.+..++
T Consensus 315 laav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvR 393 (472)
T PRK08742 315 LSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVR 393 (472)
T ss_pred cceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEe
Confidence 99999999998877531 2345789999999999999999999998999999999999998766654 5567777999
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.|.++++++....... ....++......+.+.++++||++.+.++. .+.|++.++++|+++++++|++++.+
T Consensus 394 G~Gl~~giel~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 394 QAGMVVAFELTRGGNKR--TPFPPAARVGLHAYRAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred ccceEEEEEeccCcccc--ccCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999986421100 000011122467888899999999886532 23478999999999999999999875
No 34
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1e-45 Score=338.97 Aligned_cols=354 Identities=28% Similarity=0.413 Sum_probs=282.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC---CCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||++|++.+++.+++++..... ++++...++++++.+..+ +.+.++|++||++|++.|+++++.++++.+|
T Consensus 51 ~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~i 130 (421)
T PRK06777 51 VLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGV 130 (421)
T ss_pred hhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeE
Confidence 46799999999999999999864432 357788999999999986 3679999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccc-cC-CCCHHHHHHHHHc--CCCCeEEEEEcccCCC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLT-AP-FNDVSALENLFEN--NKGEIAAIILEPVVGN 152 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~~-~~d~~~le~~~~~--~~~~~~~~~~~~~~~~ 152 (368)
+.+.++|||.+..++.+++... ....+ +...++.....++... .+ ..+++.+++.+.+ ++++++++++||+.++
T Consensus 131 i~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~ 210 (421)
T PRK06777 131 IAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGE 210 (421)
T ss_pred EEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCC
Confidence 9999999999998888766421 11111 1111111000000000 00 0136778888864 4568999999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
+|...++++|+++|.++|++||+++|+||+|+|| +.|..++..++++.||++++||++++|+|+||+++++++++.+..
T Consensus 211 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~ 290 (421)
T PRK06777 211 GGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAP 290 (421)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCC
Confidence 9998999999999999999999999999999999 888877888889999999999999999999999999999888763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+++|+++|+++++++.++++.++++++.++++++.++++++|+++..+.+.+..+.+.|.++.+++..+...
T Consensus 291 ---~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~--- 364 (421)
T PRK06777 291 ---GGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTG--- 364 (421)
T ss_pred ---CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccC---
Confidence 34678999999999999999999988889999999999999999998777777778899999998877532100
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.......+.+.++++||.+.+++. ..+ .+++.++++++++++++|++++.
T Consensus 365 ---~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 365 ---KPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred ---CccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 01223356677778999999998652 233 35778999999999999999875
No 35
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-46 Score=341.93 Aligned_cols=360 Identities=25% Similarity=0.316 Sum_probs=284.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC-C--CCCCChhHHHHHHHHHhhCCC-C---CeEEEe-CChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFPSYLQVLAALGETMKKGT-S--FGAPCLLENVLAEMVISAVPS-I---EMVRFV-NSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~-~--~~~~~~~~~~l~~~l~~~~~~-~---~~v~~~-~~gt~a~~~al~~~~~~~~~ 75 (368)
.+++||++|+|.+++.+++++.. . .+++++...+|++++.+..++ . +.++|+ +||++|++.|+++++.++++
T Consensus 74 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr 153 (464)
T PRK06938 74 TLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGR 153 (464)
T ss_pred ccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCC
Confidence 57899999999999999997532 2 245788899999999998873 2 367665 79999999999999999999
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCC---------CCHHHHHHHHHcC---CCCeE
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPF---------NDVSALENLFENN---KGEIA 142 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~d~~~le~~~~~~---~~~~~ 142 (368)
.+||.+.++|||.+..++..++.......+... .++.....+.....+. .+++.+++.+.+. +++++
T Consensus 154 ~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iA 233 (464)
T PRK06938 154 STVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPA 233 (464)
T ss_pred CeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceE
Confidence 999999999999999888877653222111111 1110000000000110 1267788888642 24799
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeee
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGG 221 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~ 221 (368)
++++||+.+++|.+.++++|+++++++|++||+++|.||+++|| |+|..++++++++.||++++||+++||+|+|.+++
T Consensus 234 AvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~ 313 (464)
T PRK06938 234 AVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVY 313 (464)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCCceEEEee
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 222 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
++++ +.+. ...+++||++|++++++++++++.++++++.++.++..+++++.|+++..+++.+..+++.|.+++++
T Consensus 314 ~~~~-~~~~---~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie 389 (464)
T PRK06938 314 REWL-DTWQ---PGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVE 389 (464)
T ss_pred hhHh-hccC---CCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEE
Confidence 8875 5443 34578999999999999999999998888999999999999999999888888888999999999999
Q ss_pred eecCC-CcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 302 FTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 302 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.... ..+..............+...++++|+.+.+.+. .. +.|++.+|++|++++++++++++.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 390 IVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred eccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 86431 1111111111123356788899999999987542 22 3468999999999999999999865
No 36
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1e-45 Score=338.93 Aligned_cols=339 Identities=24% Similarity=0.300 Sum_probs=282.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc------CC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~------~~ 75 (368)
++++||++|+|.+++.+++.+.... ++.++...++++++++..+ .+++++++||++|++.|+++++.+. ++
T Consensus 50 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r 128 (406)
T PRK12381 50 VNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF-ADRVFFCNSGAEANEAALKLARKYAHDRYGSHK 128 (406)
T ss_pred hccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC-CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCC
Confidence 4689999999999999999874322 3456778999999999874 5799999999999999999998773 67
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
.+|+.+.++|||.+...+..++.+.....+ .. ....+..++++|++++++.+. ++++++++||+++++|.
T Consensus 129 ~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~d~~~l~~~l~---~~~aaviiEPv~~~gg~ 198 (406)
T PRK12381 129 SGIVAFKNAFHGRTLFTVSAGGQPKYSQDF---AP----LPPDIRHAAYNDLNSASALID---DQTCAVIVEPIQGEGGV 198 (406)
T ss_pred CeEEEECCCcCCcchhHHhhcCCcccccCC---CC----CCCCeeEeCCCCHHHHHHhcc---CCeeEEEEeCCcCCCCC
Confidence 789999999999998888777654322111 11 112346678889999999886 47999999999999998
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
..++.+|+++|+++|++||+++|+||+|+|+ +.|..+..+.+++.||++++||++++|+|+|++++++++++.+..
T Consensus 199 ~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~~~--- 275 (406)
T PRK12381 199 IPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVMTV--- 275 (406)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhcCC---
Confidence 8889999999999999999999999999999 888777777889999999999999999999999999999988863
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..+++|+++++++++++.++++.+.++++.++++++.+++++.|+++..+.+....+++.|.++++++...
T Consensus 276 ~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~--------- 346 (406)
T PRK12381 276 GTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAE--------- 346 (406)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCc---------
Confidence 34668899999999999999999877789999999999999999998666665567778888888887421
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.......+.+.|+++||.+.+.+.+.++ +++.++++++++++++|++++.+
T Consensus 347 --~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 347 --YAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred --hhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 0123578889999999999876645554 57779999999999999998864
No 37
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.6e-45 Score=339.36 Aligned_cols=361 Identities=22% Similarity=0.245 Sum_probs=283.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC----CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
.+++||++|+|.+++.++++++.. +++.++...+|+++|++..+ +.++++|++||++|++.|+++++.+
T Consensus 61 ~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~ 140 (456)
T PRK07480 61 CVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGK 140 (456)
T ss_pred HhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 367999999999999999998532 24578899999999999997 5789999999999999999999987
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC-CCCCCCCCCCccccc-------CCCC--HHHHHHHHH-cCCCCe
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTA-------PFND--VSALENLFE-NNKGEI 141 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~d--~~~le~~~~-~~~~~~ 141 (368)
+++.+||.+.++|||.+...+..++.......++. ..++.+...+..+.. ++++ ++.+++.+. ++++++
T Consensus 141 ~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v 220 (456)
T PRK07480 141 PQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNV 220 (456)
T ss_pred CCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcE
Confidence 34678999999999999887777665322111111 111111111111100 0111 366665554 345689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v 219 (368)
+++++||+.+++|.+.++++|+++++++|++||+++|+||+++|| |+|..++++++++.||++++||++++| +|+|.+
T Consensus 221 AAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av 300 (456)
T PRK07480 221 AAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAV 300 (456)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEE
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999 499999
Q ss_pred eehHHHHHHhc-CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH-HHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 220 GGRRDIMEMVA-PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL-NKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 220 ~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
++++++++.+. ..+.+.+++||++|+++++++.++++.++++++.++. .+..++++++|+++ .+++.+..+++.|.+
T Consensus 301 ~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm 379 (456)
T PRK07480 301 GVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLV 379 (456)
T ss_pred EEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecce
Confidence 99999988873 2234568899999999999999999999888899999 59999999999984 567777789999999
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++++....... .. ..........+...++++||.+.+.+.. .+.|++.++++|+++++++|++++.+
T Consensus 380 ~gie~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 380 GAIELVKDKATR-ER-FEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred EEEEEecccccc-cc-CcchhhHHHHHHHHHHHCCcEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999996432100 00 0000112356778899999999875432 24578999999999999999999865
No 38
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-45 Score=339.06 Aligned_cols=356 Identities=26% Similarity=0.345 Sum_probs=284.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
++++||++|+|.+++.+++.+.... +..++...++++.|.+..+ +.+.++|++||++|++.|+++++.++++..|+
T Consensus 52 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii 131 (443)
T PRK08360 52 VQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKIL 131 (443)
T ss_pred hcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEE
Confidence 5789999999999999999986443 2347788999999999997 45899999999999999999999999999999
Q ss_pred EEcCCCCCCchhhhhhcCCCc-cccCCCCCCCCCCCCCCcccccCC---------CCHHHHHHHHHc--CCCCeEEEEEc
Q 017633 80 KFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF---------NDVSALENLFEN--NKGEIAAIILE 147 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~le~~~~~--~~~~~~~~~~~ 147 (368)
.+.++|||.+..++...+... ....+....++.....++....+. ++++.+++.+.+ ++++++++++|
T Consensus 132 ~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~e 211 (443)
T PRK08360 132 SYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAE 211 (443)
T ss_pred EEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEEC
Confidence 999999999988877765321 111111111111111111111111 234566777754 34689999999
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHH
Q 017633 148 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 148 ~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
|+++++|.+.++++|++++.++|++||+++|+||+|++| +.|..++..++++.||++++||++++|+|+|+++++++++
T Consensus 212 P~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~ 291 (443)
T PRK08360 212 PIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIM 291 (443)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHH
Confidence 999999999999999999999999999999999999999 8887777777899999999999999999999999999998
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
+.+.. ..+.+|+++++++++++.++++.+.++++.++++++.+++++.|+++..+++.+..+++.|.++++++....
T Consensus 292 ~~~~~---~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~ 368 (443)
T PRK08360 292 DSLPP---LAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDR 368 (443)
T ss_pred hhhcC---CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCC
Confidence 88863 346789999999999999999999888899999999999999999987777777789999999999886421
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. +.+.......+...|+++|+.+.+.+...+ .|++.++++|++++++++++++.+
T Consensus 369 ~~-----~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 369 ET-----KERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred cc-----cCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 10 011223456788999999999976544443 458999999999999999999864
No 39
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-45 Score=340.48 Aligned_cols=361 Identities=20% Similarity=0.263 Sum_probs=284.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC---CCC-CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGT---SFG-APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~---~~~-~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
.+++||++|+|.+++.+++.+.. .++ .+++...+++++|.+..+ +.+.++|++||++|++.|+++++.+
T Consensus 62 ~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~ 141 (466)
T PRK07036 62 CVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGR 141 (466)
T ss_pred hhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCC
Confidence 46799999999999999998743 232 678889999999999987 4789999999999999999999877
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCC---------CHHHHHHHHHc-CCCCe
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFN---------DVSALENLFEN-NKGEI 141 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------d~~~le~~~~~-~~~~~ 141 (368)
+++.+||.+.++|||.+..++..++.......+... .++.....+..+..+.+ .++.+++.+.. +++++
T Consensus 142 t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i 221 (466)
T PRK07036 142 PAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNI 221 (466)
T ss_pred CCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCce
Confidence 246789999999999998877776654322222111 11111111111111111 13456666653 45789
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccc-ccCCCcchhhhhhhccCC-cccee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE-YFGVTPDLTTLGKIIGGG-LPVGA 218 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~-~~~~~~di~s~sK~~~~G-~~iG~ 218 (368)
+++++||+.+++|.+.++++|+++++++|++||+++|+||+++|| |+|..+.++ ++++.||++++||++++| +|+|.
T Consensus 222 Aavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~a 301 (466)
T PRK07036 222 AAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGA 301 (466)
T ss_pred EEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEE
Confidence 999999999999999999999999999999999999999999999 999888887 789999999999999999 59999
Q ss_pred eeehHHHHHHhcCC---C-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 219 YGGRRDIMEMVAPA---G-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 219 v~~~~~~~~~~~~~---~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
+++++++++.+... + .+.+++||++|++++++++++++.++++++.++..++.+++++.|+++ .+++.+..+++.
T Consensus 302 v~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~ 380 (466)
T PRK07036 302 VIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGD 380 (466)
T ss_pred EEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEee
Confidence 99999999887532 1 246778999999999999999999988899999999999999999875 567778899999
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
|.++++++...... ......+......+...++++||.+.+.+.. .+.|++.+|++|++++++++++++.+
T Consensus 381 Gl~~~ve~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 381 HLMACVECVADKGS--KALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred ceEEEEEEccCccc--cCCCCchhHHHHHHHHHHHHCCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 99999998643211 0000111223567889999999999876532 24578999999999999999998864
No 40
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-45 Score=338.75 Aligned_cols=362 Identities=21% Similarity=0.254 Sum_probs=287.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCCC-CCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
.+++||++|+|.+++.+++++.... .+.++...+|+++|++.+++ .+.++|++||++|++.|+++++.+ +
T Consensus 42 ~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t 121 (447)
T PRK06917 42 TAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQ 121 (447)
T ss_pred hccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999875322 35678899999999999984 589999999999999999999765 4
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC---------CCCHHHHHHHHHcC-CCCeE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP---------FNDVSALENLFENN-KGEIA 142 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~d~~~le~~~~~~-~~~~~ 142 (368)
++.+|+.+.++|||.+..++..++.......+ +...++.....+.....+ .++++.+++.++++ +++++
T Consensus 122 ~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iA 201 (447)
T PRK06917 122 GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIA 201 (447)
T ss_pred CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceE
Confidence 57889999999999999888876643221111 111111111111111111 12457788888754 35799
Q ss_pred EEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-cceee
Q 017633 143 AIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAY 219 (368)
Q Consensus 143 ~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~v 219 (368)
++++||+.++ +|.+.++++|++++.++|++||+++|+||+++|| |+|..++++++++.||++++||++++|+ |+|.+
T Consensus 202 Avi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~ 281 (447)
T PRK06917 202 AFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAAT 281 (447)
T ss_pred EEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEE
Confidence 9999999985 6789999999999999999999999999999999 9999888999999999999999999995 99999
Q ss_pred eehHHHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceE
Q 017633 220 GGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 298 (368)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 298 (368)
++++++++.+... +...+++|+++|++++++++++++.++++++.+++.++.+++++.|+++..+++.+..+++.|.++
T Consensus 282 ~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~ 361 (447)
T PRK06917 282 VVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLI 361 (447)
T ss_pred EEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEE
Confidence 9999998887642 234567899999999999999999998888999999999999999999887788888999999999
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-------CCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++++...... .....++......+...|+++||.+.+.+ ... +.|++.++++|++++++++++++.+
T Consensus 362 ~ie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 362 GVEFVADKKT--KQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred EEEEeccCCc--CCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 9998643210 00000112345778899999999998752 122 3468999999999999999999865
No 41
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-45 Score=338.79 Aligned_cols=353 Identities=21% Similarity=0.262 Sum_probs=281.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
++++||++|+|.+++.+++++.... ..+++...+|++.|++..+ +.+.++|++||++|++.|+++++.++++.+||
T Consensus 64 ~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii 143 (457)
T PRK05639 64 AASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWIL 143 (457)
T ss_pred hhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEE
Confidence 5789999999999999999875332 2346788899999999987 35899999999999999999999999999999
Q ss_pred EEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccCC-----CC--------HHHHHHHHHc---CCCCe
Q 017633 80 KFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPF-----ND--------VSALENLFEN---NKGEI 141 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~-----~d--------~~~le~~~~~---~~~~~ 141 (368)
.+.++|||.+..++...+... ....+ +...++.....++....++ .| ++.+++.+.. +++++
T Consensus 144 ~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~i 223 (457)
T PRK05639 144 AFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEV 223 (457)
T ss_pred EECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCce
Confidence 999999999988887765311 11111 1111111111111111110 12 2345555432 34689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYG 220 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~ 220 (368)
+++++||+.+++|.+.++++|++++.++|++||+++|+||+++|| ++|..++.+++++.||++++||++++|+++|+++
T Consensus 224 AAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~ 303 (457)
T PRK05639 224 AALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVI 303 (457)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCCcceeEE
Confidence 999999999999999999999999999999999999999999999 8998888899999999999999999999999999
Q ss_pred ehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 221 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
+++++++... ..+.+|+++|++++++++++++.++++++.++..++.++++++|+++..+++.+..+++.|.++++
T Consensus 304 ~~~~i~~~~~----~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gv 379 (457)
T PRK05639 304 GRKELMDLTS----GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGV 379 (457)
T ss_pred ehHHHHhhcC----CCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEE
Confidence 9999988322 124578999999999999999999888999999999999999999988778888899999999999
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++..... .++......+.+.|+++|+++.+.+. ..+ .|++.++++|+++++++|++++.+
T Consensus 380 e~~~~~~-------~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 380 EIVKENG-------KPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred EEecCCC-------CCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 9854211 01233457789999999999987542 333 468999999999999999999854
No 42
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=340.01 Aligned_cols=361 Identities=21% Similarity=0.197 Sum_probs=285.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---C-CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---F-GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~-~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||+||+|.+++.+++++... . .+.++...+++++|++.++ +.+.++|++||++|++.|+++++.+
T Consensus 59 ~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~ 138 (460)
T PRK06105 59 SVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGR 138 (460)
T ss_pred hccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 578999999999999999988532 2 2467888999999999997 4689999999999999999998765
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC--C--------CCHHHHHHHHHc-CCCC
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP--F--------NDVSALENLFEN-NKGE 140 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~--------~d~~~le~~~~~-~~~~ 140 (368)
+++.+||.+.++|||.+..++..++.......+ +...++.+...+.....+ . ..++++|+.+.. ++++
T Consensus 139 t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 218 (460)
T PRK06105 139 PEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDT 218 (460)
T ss_pred CCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCc
Confidence 347789999999999998877766543221111 111111111111111110 0 024677888753 4468
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-cccee
Q 017633 141 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGA 218 (368)
Q Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~ 218 (368)
++++++||+.+++|.+.++++|+++++++|++||+++|+||+++|| |+|..+.++++++.||++++||++++| +|+|+
T Consensus 219 iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~a 298 (460)
T PRK06105 219 IAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSA 298 (460)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceE
Confidence 9999999999999999999999999999999999999999999999 999988899999999999999999988 69999
Q ss_pred eeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 219 YGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 219 v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
+++++++++.+... +...+++|+++|++++++++++++.++++++.++.+++.+++++.|+++ .+++.+..+++.
T Consensus 299 v~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~ 377 (460)
T PRK06105 299 VLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGV 377 (460)
T ss_pred EEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEec
Confidence 99999998877532 2244789999999999999999999998899999999999999999998 777878899999
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
|.++++++....... ....+....+..+...++++||.+.+.+.. .+.|++.++++|++++++++++++.+
T Consensus 378 Gl~~gie~~~~~~~~--~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 378 GLIAAVELVADKATK--TPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred ceEEEEEEecCcccC--CCCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 999999986421100 000001223467889999999999886532 23578899999999999999999865
No 43
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=1.3e-45 Score=334.31 Aligned_cols=337 Identities=23% Similarity=0.335 Sum_probs=283.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC-------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG------- 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~------- 74 (368)
..++||++|+|.+++.+++++..... +.++...++++.+.+.. +.++++|++||++|++.|+++++.+++
T Consensus 26 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~ 104 (382)
T PLN00144 26 VNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASS-FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKK 104 (382)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcC-CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCc
Confidence 56899999999999999998754332 34778899999999876 457999999999999999999988753
Q ss_pred ------CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 75 ------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 75 ------~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
+.+||.+.++|||.+..++...+.......+. .....+..++++|++++++.+.. +++++++++|
T Consensus 105 ~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP 175 (382)
T PLN00144 105 DPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFE-------PLMPGVTFVEYGNLEAARKLIQK--GKTAAVFVEP 175 (382)
T ss_pred cccccccceEEEECCCcccccHHHHhcCCCccccccCC-------CCCCCeEEeCCCCHHHHHHhcCC--CCeEEEEEcc
Confidence 36799999999999998888776543221111 11123566788899999998863 4799999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
+++++|...++.+|+++|+++|++||+++|+||+|++| +.|..+..+.+++.||+.+|||++++|+|+|++++++++++
T Consensus 176 ~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~pig~v~~~~~~~~ 255 (382)
T PLN00144 176 VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVAS 255 (382)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCcceEEEEEcHHHHh
Confidence 98888888889999999999999999999999999999 88877777788999999999999999999999999999998
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+.. ..+.+|+++|+++++++.++++.++++++.+++++.++++++.+.+++.+++....+.+.|.++|+.+..
T Consensus 256 ~~~~---~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--- 329 (382)
T PLN00144 256 AINP---GDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDV--- 329 (382)
T ss_pred ccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecC---
Confidence 8863 3467899999999999999999998888999999999999999999887776666777899999998821
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCC-Ccc--ccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAG--FTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~--~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
....+...++++||.+.+++. ..+ .+++.++++++++++++|++++.++
T Consensus 330 ------------~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 330 ------------PAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ------------ccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 125788999999999998753 333 3577789999999999999998753
No 44
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.4e-45 Score=337.35 Aligned_cols=354 Identities=24% Similarity=0.327 Sum_probs=282.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC---CCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++++..... .+.+...+++++|.+..+ +.+.++|++||++|++.|+++++.++++.+|
T Consensus 44 ~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~i 123 (420)
T TIGR00700 44 VLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGV 123 (420)
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcE
Confidence 57899999999999999998854332 456778899999999987 3579999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccc-------cCCC-CHHHHHHHHH--cCCCCeEEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLT-------APFN-DVSALENLFE--NNKGEIAAIIL 146 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-------~~~~-d~~~le~~~~--~~~~~~~~~~~ 146 (368)
|.+.++|||.+..++..++... ....+ +...++.....+.... .+.+ +++.+++.+. +++++++++++
T Consensus 124 i~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~ 203 (420)
T TIGR00700 124 VAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVI 203 (420)
T ss_pred EEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEE
Confidence 9999999999998887765421 11111 1011111000000000 1111 2567777764 34578999999
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHH
Q 017633 147 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 147 ~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~ 225 (368)
||+.+++|.+.++++|+++|+++|++||+++|+||+|++| +.|..++++++++.||++++||++++|+|+||+++++++
T Consensus 204 Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i 283 (420)
T TIGR00700 204 EPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEI 283 (420)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCcceEEEEecHHH
Confidence 9999999999999999999999999999999999999999 888877888889999999999999999999999999999
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
++.+.. ..+.+|+++|+++++++.++++.++++++.++..+..++++++|+++...++....+.+.|.++++.+...
T Consensus 284 ~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~ 360 (420)
T TIGR00700 284 MDAPAP---GGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDP 360 (420)
T ss_pred HhhcCC---CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecC
Confidence 888863 34778999999999999999999888889999999999999999998777776667888999999988532
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
. . ..++......+.+.++++||.+.+++. ..++ +++.++++++++++++|++++.
T Consensus 361 ~--~----~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 361 G--T----TEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred C--C----CCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 1 0 012233457788888999999998642 3333 4667899999999999999875
No 45
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-45 Score=338.80 Aligned_cols=362 Identities=21% Similarity=0.280 Sum_probs=286.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------ 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------ 73 (368)
++++||++|+|.+++.+++++... +.+.++...++++++.+..+ +.++++|++||++|++.|+++++.+.
T Consensus 63 ~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 142 (460)
T PRK06541 63 VVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKP 142 (460)
T ss_pred hccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999998532 35678889999999999987 47899999999999999999999872
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccC-C-CC--------HHHHHHHHHc-CCCCe
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP-F-ND--------VSALENLFEN-NKGEI 141 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~d--------~~~le~~~~~-~~~~~ 141 (368)
++.+||.+.++|||.+..++..++.......+ +...++........+..+ + ++ ++.+++.+++ +++++
T Consensus 143 ~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 222 (460)
T PRK06541 143 GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTV 222 (460)
T ss_pred CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 46889999999999999888877654322111 212222222222222222 2 12 3678888874 35689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-cceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~v 219 (368)
+++++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| +.|..+..+++++.||++++||++++|+ |+|++
T Consensus 223 Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav 302 (460)
T PRK06541 223 AAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAM 302 (460)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEE
Confidence 999999999999999999999999999999999999999999999 9999888889999999999999999997 99999
Q ss_pred eehHHHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceE
Q 017633 220 GGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 298 (368)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 298 (368)
++++++++.+... ..+.+++|+++|++++++++++++.+.++++.+++.++.+++++.|+++.. .+.+..+.+.|.++
T Consensus 303 ~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~ 381 (460)
T PRK06541 303 IASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFY 381 (460)
T ss_pred EEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEE
Confidence 9999998877643 334567899999999999999999998888999999999999999998754 66666788999999
Q ss_pred EEEeecCCCc--ccchhcccccHHHHHHHHHHHHcCeeecCC--CCCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVY--NFEDAKKSETTKFARFYRGMLEEGVYFAPS--QFEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++++...... ++... .........+.+.|+++||++.+. +... +.+++.++++|+++++++|++++.+
T Consensus 382 ~ie~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 382 GIELVKDKATKETFTDD-ESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEecCcccccCCcch-hhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998642210 00000 000011236788999999999874 3333 3568899999999999999999865
No 46
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2e-45 Score=337.05 Aligned_cols=347 Identities=26% Similarity=0.392 Sum_probs=283.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||++|++.+++.+++++.... ..+++...++++.+++..+ +.+.++|++||++|++.|+++++.++++.+|
T Consensus 51 ~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~i 130 (421)
T PRK09792 51 VLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGV 130 (421)
T ss_pred hhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeE
Confidence 4679999999999999999985433 2367888999999999886 3479999999999999999999999899999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCCCCCCCCCCCCCCcccccCC----------CCHHHHHHHHHc--CCCCeEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF----------NDVSALENLFEN--NKGEIAAII 145 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~d~~~le~~~~~--~~~~~~~~~ 145 (368)
+.+.++|||.+...+..++... ....+.... ..+..+|. ++++.+++.+.+ +++++++++
T Consensus 131 i~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~-------~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (421)
T PRK09792 131 IAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP-------GSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAII 203 (421)
T ss_pred EEECCCcCCccHHHHhhcCCCcccccCCCCCC-------CCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEE
Confidence 9999999999998888766421 111111110 11222222 245788888874 246799999
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHH
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~ 224 (368)
+||+++++|...++++|+++|.++|++||+++|+||+|++| +.|..+++++++..||+++|||++++|+|+|+++++++
T Consensus 204 ~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~ 283 (421)
T PRK09792 204 FEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNAN 283 (421)
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHH
Confidence 99999889988999999999999999999999999999999 88888888888999999999999999999999999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+++.+.. ..+.+|+++|++++++++++++.++++++.+++++..+++++.|+.+..+++....+.+.|.++|+++..
T Consensus 284 i~~~~~~---~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~ 360 (421)
T PRK09792 284 IMDAPAP---GGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFND 360 (421)
T ss_pred HHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecC
Confidence 9888763 3477899999999999999999998888999999999999999999877788777888989999999853
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
... +.+.......+...++++||.+.+.+. .. +.+++.++++|+++++++|++++.
T Consensus 361 ~~~------~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 361 PQT------GEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred Ccc------CCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 210 011223467889999999999975332 23 345788999999999999999875
No 47
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.4e-46 Score=338.25 Aligned_cols=350 Identities=23% Similarity=0.284 Sum_probs=280.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
+.++||++|+|.+++.+++++..+. +++++...+|++.+++..+ +.++++|++||++|++.|+++++.+ +
T Consensus 55 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 134 (429)
T PRK06173 55 AALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEV 134 (429)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999885432 4578899999999999987 5789999999999999999999987 3
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCc-cccCCC-CCCCCCCCCCCcccc-cC--CCCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLP-DSPGVPKGATYETLT-AP--FNDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~-~~--~~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
++.+||.+.++|||.+..++..++... ....+. ..........+.... .+ ..+++.+++.+.+++++++++++||
T Consensus 135 ~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EP 214 (429)
T PRK06173 135 QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEP 214 (429)
T ss_pred CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcc
Confidence 577899999999999877777654311 111111 011110000000000 00 0146778888876667899999999
Q ss_pred c-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHH
Q 017633 149 V-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDI 225 (368)
Q Consensus 149 ~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~ 225 (368)
+ .+.+|...++++|+++++++|++||+++|+||+|+|| ++|..++++++++.||+++|||+++|| +++|.+++++++
T Consensus 215 i~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i 294 (429)
T PRK06173 215 VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAI 294 (429)
T ss_pred hhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHH
Confidence 7 8999999999999999999999999999999999999 889888888999999999999999999 599999999999
Q ss_pred HHHhcCC--CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 226 MEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 226 ~~~~~~~--~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
++.+... +.+.+++|++++++++++++++++.+.++++.++++++.+++++.|+++ ...+....+++.|.++.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~ 373 (429)
T PRK06173 295 AQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMK 373 (429)
T ss_pred HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeC
Confidence 8887531 2356778999999999999999999988889999999999999999875 334444567788999999884
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. +.....+++.|+++||.+.+.+.. .+.|++.++++|+++++++|++++.+
T Consensus 374 ~-------------~~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 374 E-------------PVNMATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred C-------------cccHHHHHHHHHHCCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 2 122467899999999999887632 23579999999999999999999865
No 48
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-45 Score=338.15 Aligned_cols=362 Identities=22% Similarity=0.214 Sum_probs=281.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC----CCCCChhHHHHHHHHHhhCCC-CCeEEEeCChHHHHHHHHHHHHHhc---C-
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFT---G- 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~gt~a~~~al~~~~~~~---~- 74 (368)
..++||++|+|.+++.+++++... ++.+++...+|++++++.+++ .++++|++||++|++.|+++++.+. +
T Consensus 65 ~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~ 144 (460)
T PRK12403 65 CTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGK 144 (460)
T ss_pred hhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCC
Confidence 457999999999999999988532 234678899999999999974 5899999999999999999998772 2
Q ss_pred --CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCccccc-------CCC--CHHHHHHHHH-cCCCCeE
Q 017633 75 --RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTA-------PFN--DVSALENLFE-NNKGEIA 142 (368)
Q Consensus 75 --~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--d~~~le~~~~-~~~~~~~ 142 (368)
+..|+.+..+|||++...+.+++........+...++.+...+..+.. +++ +++++++.+. +++++++
T Consensus 145 ~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ia 224 (460)
T PRK12403 145 PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVA 224 (460)
T ss_pred CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceE
Confidence 345777899999999888888765432211111111111000101110 011 1356766654 3446899
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-cceeee
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYG 220 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~v~ 220 (368)
++++||+.+++|.+.++++|+++++++|++||++||+||+++|| |+|..++++++++.||++++||++++|+ ++|.++
T Consensus 225 avI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v 304 (460)
T PRK12403 225 GFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLV 304 (460)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEE
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999999995 999999
Q ss_pred ehHHHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH-HHHHHHHHHHHHHHHhcCCceEEeeccceE
Q 017633 221 GRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-KITGELTQGIIDAGKKAGHAICGGYISGMF 298 (368)
Q Consensus 221 ~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 298 (368)
+++++++.+... +.+.+++|+++|++++++++++++.++++++.++++ ++.+++++.|+++..+++.+..+++.|.++
T Consensus 305 ~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~ 384 (460)
T PRK12403 305 LSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVA 384 (460)
T ss_pred ECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEE
Confidence 999998887532 234578999999999999999999998888999996 999999999999888888888999999999
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++++......... ..........+...++++|+.+.+.+.. .+.|++.++++|++++++++++++.+
T Consensus 385 gie~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 385 ALQFAEDKATRKR--FANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred EEEEccCcccccc--ccchhHHHHHHHHHHHhCCEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998643211000 0001112345677789999999865432 34578999999999999999999865
No 49
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-45 Score=338.32 Aligned_cols=354 Identities=21% Similarity=0.259 Sum_probs=284.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCC-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+++||++|+|++++.+++++.... .++++...+|+++|++.+++ .+.++|++||++|++.|+++++.++++.+|+.
T Consensus 82 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~ 161 (459)
T PRK06082 82 VHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVS 161 (459)
T ss_pred hcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEE
Confidence 5679999999999999999875432 35688999999999999974 58999999999999999999999989999999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCC--------HHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND--------VSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d--------~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+.++|||.+..++..++.......+ +...++.....+.....++++ ++.+++.+.+. ++++++++||+.+
T Consensus 162 ~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g 240 (459)
T PRK06082 162 LWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRN 240 (459)
T ss_pred EeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccC
Confidence 9999999998888777654332222 111222211112222223322 35678888653 5799999999988
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMV 229 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~ 229 (368)
+ |...++++|+++++++|++||+++|+||+++|| |+|..++++++++.||++++||++++| +++|.+++++++....
T Consensus 241 ~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~ 319 (459)
T PRK06082 241 T-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAA 319 (459)
T ss_pred C-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhc
Confidence 7 577899999999999999999999999999999 999988999999999999999999988 5999999998876544
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
. ....+ +|+++|++++++++++++.++++++.++..++.+++++.|+++..+++.+..+++.|.++++++......
T Consensus 320 ~--~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~- 395 (459)
T PRK06082 320 Q--ISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHT- 395 (459)
T ss_pred c--CCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccc-
Confidence 3 12234 7999999999999999999988889999999999999999998888888889999999999998642110
Q ss_pred cchhcccccHHHHHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 310 FEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+.......+...++++|+.+.+.+... +.++++++++|++++++++++++.+
T Consensus 396 ----~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 396 ----KERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred ----cCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 01112335678888999999998764343 3467899999999999999999865
No 50
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-45 Score=337.36 Aligned_cols=353 Identities=29% Similarity=0.411 Sum_probs=285.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++++.... .++++...+|++.|.+..+ ..+.++|++||++|++.|+++++.++++++|
T Consensus 65 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~I 144 (441)
T PRK05769 65 VTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYI 144 (441)
T ss_pred hcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeE
Confidence 5789999999999999999885443 3457889999999999987 3589999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccCCC--C--------HHHHHH-HHHc--CCCCeEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFN--D--------VSALEN-LFEN--NKGEIAA 143 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~--d--------~~~le~-~~~~--~~~~~~~ 143 (368)
+.+.++|||.+..++..++... ....+ +...++.....+..+..|++ | ++.+++ .+++ +++++++
T Consensus 145 i~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaa 224 (441)
T PRK05769 145 IAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAA 224 (441)
T ss_pred EEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence 9999999999998887765421 11111 22233332222233333332 1 344666 3332 3568999
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeeh
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~ 222 (368)
+++||+++++|.+.++++|++++.++|++||+++|+||+|+|| +.|..++++++++.||++++||++++|+|+|+++++
T Consensus 225 vi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~ 304 (441)
T PRK05769 225 IIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGR 304 (441)
T ss_pred EEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCcccEEEEEe
Confidence 9999999999999999999999999999999999999999999 888888888899999999999999989999999999
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
+++++... ..+++|+++++++++++.++++.+++ ++.++++++.+++++.|+++..+++.+..+.+.|.++.+.+
T Consensus 305 ~~i~~~~~----~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~ 379 (441)
T PRK05769 305 AELMFLPP----GSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVEL 379 (441)
T ss_pred hhhhhcCC----CCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEe
Confidence 88875432 34678999999999999999999988 89999999999999999998877787778899999999988
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.... ..+.......+.+.|+++||.+.+.+...+ .+++.++++|++++++++++++.++
T Consensus 380 ~~~~-------~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 380 VKDR-------KEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred ccCC-------ccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5421 011223456788999999999987654443 4688899999999999999998753
No 51
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.9e-45 Score=337.43 Aligned_cols=349 Identities=25% Similarity=0.331 Sum_probs=285.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--C-CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~-~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
.+++||++|+|.+++.+++++... + +++++...++++.|++..+ +.++++|++||++|++.|+++++.+ +
T Consensus 53 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~ 132 (423)
T PRK05964 53 VATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEP 132 (423)
T ss_pred hccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999988542 2 4677889999999999997 5789999999999999999999987 4
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCC-----HHHHHHHHHcCCCCeEEEEEcc
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-----VSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~le~~~~~~~~~~~~~~~~~ 148 (368)
++.+||.+.++|||.+..++...+.......+ .... .....+..|.+| ++++++.+.+++++++++++||
T Consensus 133 ~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~---~~~~--~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep 207 (423)
T PRK05964 133 GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALY---TPLL--FEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEP 207 (423)
T ss_pred CCcEEEEEcCCcCCccHHHHhcCCCccccccc---cCcC--CCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 67899999999999998888877654322211 1111 112334444455 8889999987667899999999
Q ss_pred -cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHH
Q 017633 149 -VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDI 225 (368)
Q Consensus 149 -~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~ 225 (368)
+.+++|...++++|+++|+++|++||+++|+||+|+|| ++|..++++.+++.||++++||++++| +|+|++++++++
T Consensus 208 ~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i 287 (423)
T PRK05964 208 LVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEI 287 (423)
T ss_pred ccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHH
Confidence 57888999999999999999999999999999999999 888877788899999999999999987 899999999999
Q ss_pred HHHhcCC---CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 226 MEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 226 ~~~~~~~---~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
++.+... +...+++|+++|+++++++.++++.++++++.+++.++.+++++.|+++. ..+....+.+.|.++.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l 366 (423)
T PRK05964 288 FEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFR-DLPGVADVRVLGAIGAVEL 366 (423)
T ss_pred HHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc-cCCCeEEeecccEEEEEEe
Confidence 8887531 23457789999999999999999999888899999999999999998863 3444445677888888887
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.... .......+.+.|.++||.+.+.+.. .+.+++.++++|++++++++++++.++
T Consensus 367 ~~~~----------~~~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 367 DRPV----------LERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ccCc----------chhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 4311 0023568899999999999886532 234678899999999999999999875
No 52
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=8e-45 Score=333.74 Aligned_cols=356 Identities=25% Similarity=0.317 Sum_probs=282.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC---CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------
Q 017633 4 LIILFPSYLQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------ 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------ 73 (368)
.+++||++|++.+++.+++++.. .+..+++...++++++++..+ +.++++|++||++|++.|+++++.+.
T Consensus 57 ~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~ 136 (442)
T PRK13360 57 CVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEG 136 (442)
T ss_pred HhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 36799999999999999998743 234567888999999999997 57899999999999999999999873
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCC-cccccCCC---------CHHHHHHHHHcC-CCCe
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATY-ETLTAPFN---------DVSALENLFENN-KGEI 141 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~---------d~~~le~~~~~~-~~~~ 141 (368)
++.+||.+.++|||.+..++..++.......+. ...++.+.... .....++. .++++++.+..+ ++++
T Consensus 137 ~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~ 216 (442)
T PRK13360 137 SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTI 216 (442)
T ss_pred CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcE
Confidence 467899999999999988888776543322221 11111100000 00110110 256788888643 4689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v 219 (368)
+++++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|..+.++++++.||++++||++++| +|+|.+
T Consensus 217 aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav 296 (442)
T PRK13360 217 AAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAV 296 (442)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEE
Confidence 999999999999999999999999999999999999999999999 999988889999999999999999988 799999
Q ss_pred eehHHHHHHhcCCC----CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 220 GGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 220 ~~~~~~~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
++++++++.+.... .+.+++||++++++++++.++++.++++++.++..++.+++++.|+++. +.+....+++.|
T Consensus 297 ~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~G 375 (442)
T PRK13360 297 FVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLR-DAPHVIDIRNLG 375 (442)
T ss_pred EEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCeeeeeccc
Confidence 99999988775321 2357789999999999999999999888899999999999999998863 355555778888
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.+..+.+..... .......++.+.|+++||++.+.+.. .+.+++.+|++|+++++++|++++.++
T Consensus 376 l~~~~~l~~~~~--------~~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 376 LVGAVELAPRDG--------KPGKRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred eEEEEEEecCCC--------CcchhHHHHHHHHHHCCcEEEecCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 888888753211 01123467888999999999876542 244679999999999999999998764
No 53
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=7.8e-45 Score=332.55 Aligned_cols=336 Identities=27% Similarity=0.360 Sum_probs=277.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh------cCC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~------~~~ 75 (368)
++++||++|++.+++.+++++....+ +.++...++++++++.. +.+++++++||++|++.++++++.+ +++
T Consensus 42 ~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r 120 (389)
T PRK01278 42 VNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS-FADKVFFTNSGAEAVECAIKTARRYHYGKGHPER 120 (389)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhC-CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 46899999999999999998743322 35778899999999987 4579999999999999999998766 345
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
++||+++++|||++...+..++.+.....+.. ....+..++++|++++++.++ +++++++++|+++++|.
T Consensus 121 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~ 190 (389)
T PRK01278 121 YRIITFEGAFHGRTLATIAAGGQEKYLEGFGP-------LVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGI 190 (389)
T ss_pred CEEEEECCCcCCCcHHHHhccCChhhcccCCC-------CCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCC
Confidence 68999999999999888877765432221111 012234566779999999997 47999999999998888
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
..++.+++++|+++|++||+++|+||+|+|| +.|..+..+.+++.||+++|||++++|+|+||+++++++++.+..
T Consensus 191 ~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~--- 267 (389)
T PRK01278 191 RPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTP--- 267 (389)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCC---
Confidence 8889999999999999999999999999999 877766667778999999999999999999999999998887763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchh
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
..+++|+++|+++++++.++++.++++++.++++++.++++++|+++....+ ....+.+.|.++++.+..
T Consensus 268 ~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~--------- 338 (389)
T PRK01278 268 GTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV--------- 338 (389)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec---------
Confidence 3467888999999999999999887677889999999999999998766555 445667777888876621
Q ss_pred cccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 314 KKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+..++++.|+++||.+.|++...+|+ ++.++++++++++++|++++.++
T Consensus 339 ------~~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 339 ------PNRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ------CHHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 24689999999999999987666554 57789999999999999998764
No 54
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=1.1e-44 Score=335.44 Aligned_cols=356 Identities=26% Similarity=0.361 Sum_probs=279.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCCC-C-CeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~-~-~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||++|+|.+++.+++++.... .+.++...++++.|.+..++ . ++++|++||++|++.|+++++.++++.+|
T Consensus 65 ~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~i 144 (451)
T PRK06918 65 TINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGI 144 (451)
T ss_pred hcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcE
Confidence 4679999999999999999986443 23478899999999999974 3 69999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccCCC-------C--HHHHHHHHHc--CCCCeEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFN-------D--VSALENLFEN--NKGEIAAII 145 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~-------d--~~~le~~~~~--~~~~~~~~~ 145 (368)
|.+.++|||.+..++...+... ....+ +...++.....+.....+.. + ++.+++.+.. +++++++++
T Consensus 145 i~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi 224 (451)
T PRK06918 145 ISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVV 224 (451)
T ss_pred EEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 9999999999998887765321 11111 11111111100111111110 1 2345554431 346899999
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHH
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~ 224 (368)
+||+++++|.++++++|+++|+++|++||+++|+||+|++| +.|..+++..+++.||++++||++++|+|+||++++++
T Consensus 225 ~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~ 304 (451)
T PRK06918 225 MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKE 304 (451)
T ss_pred ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHH
Confidence 99999999999999999999999999999999999999999 88877777888889999999999999999999999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+++.+.. ..+++|+++++++++++.++++.+.++++.+++++..++++++|+++..+++.+..+.+.|.++.+.+..
T Consensus 305 i~~~~~~---~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~ 381 (451)
T PRK06918 305 IMDESAP---GELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQ 381 (451)
T ss_pred HHhccCC---CCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEcc
Confidence 9888763 3477899999999999999999998888999999999999999999876666666778888888887742
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
... ...++......+.+.++++||.+.+++. ..++ +++.++++++++++++|++++.+
T Consensus 382 ~~~-----~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 382 DRK-----TKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred CCC-----cCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 110 0112334467788899999999998642 3333 56678999999999999999865
No 55
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.3e-44 Score=331.97 Aligned_cols=340 Identities=27% Similarity=0.353 Sum_probs=279.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc------CC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~------~~ 75 (368)
++++||++|+|.+++.+++++....+ ..++...++++.+++.. +.+.+++++||++|++.|+++++.+. ++
T Consensus 51 ~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~ 129 (403)
T PRK05093 51 VTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-FAERVFFANSGAEANEAAFKLARRYACDRHGPEK 129 (403)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCC
Confidence 47899999999999999998743322 35677889999999987 44799999999999999999998773 57
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+.||.++++|||.+..++...+.......+. ....++..++++|++++++.+. ++++++++||+++++|.
T Consensus 130 ~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~---~~~aaiiiep~~~~gg~ 199 (403)
T PRK05093 130 TEIIAFHNSFHGRTLFTVSVGGQPKYSDGFG-------PKPADITHVPFNDLAAVKAVID---DHTCAVVVEPIQGEGGV 199 (403)
T ss_pred CeEEEEcCCcCCchhhhHhhcCChhhhhcCC-------CCCCCcEEeCCCCHHHHHHHhc---CCeEEEEEecccCCCCC
Confidence 7899999999999887777655432111111 1123567788899999999886 47999999999999998
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
..++++|+++|+++|++||+++|+||+|+++ +.|..++...+++.||+.||||++++|+|+||+++++++++.+..
T Consensus 200 ~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~~--- 276 (403)
T PRK05093 200 IPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFKV--- 276 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCCcceEEEEEcHHHHhhcCC---
Confidence 8889999999999999999999999999999 777666666788899999999999999999999999999888863
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..+..+++++++.++++.++++.+.++++.++++++++++++.|+++....+....+++.|.++|+.+...
T Consensus 277 ~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~--------- 347 (403)
T PRK05093 277 GTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQ--------- 347 (403)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCc---------
Confidence 34557888999999999999998877788999999999999999987655555556667788888887321
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
......+++..|+++||.+.+.+...+|+ ++.++++++++++++|++++.++
T Consensus 348 --~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 348 --YKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred --chhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 01245789999999999999876566654 77889999999999999998653
No 56
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=8.8e-45 Score=331.92 Aligned_cols=340 Identities=20% Similarity=0.281 Sum_probs=276.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhC--C-CC-CeEEE-eCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAV--P-SI-EMVRF-VNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~--~-~~-~~v~~-~~~gt~a~~~al~~~~~~~~~ 75 (368)
++++||++|+|.+++.+++++... ....++...+|+++|++.. + +. +.++| ++||++|++.|+++++.++++
T Consensus 46 ~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr 125 (412)
T TIGR02407 46 ALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGR 125 (412)
T ss_pred hccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCC
Confidence 467999999999999999986322 1235788899999999975 3 22 35655 589999999999999999889
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC--------CCHHHHHHHHHcCC---CCeEEE
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF--------NDVSALENLFENNK---GEIAAI 144 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d~~~le~~~~~~~---~~~~~~ 144 (368)
.+||.+.++|||.+..++..++.......+... ...+..+|. ++++.+++.+.++. ++++++
T Consensus 126 ~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aav 198 (412)
T TIGR02407 126 SNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVP-------LSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAV 198 (412)
T ss_pred CeEEEECCCcCCchHHHHHhcCCcccccCCCCC-------CCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEE
Confidence 999999999999999888887654322211100 012233333 34778888887532 468999
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccC-Cccceeeeeh
Q 017633 145 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGGR 222 (368)
Q Consensus 145 ~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~~ 222 (368)
++||+.+++|.+.++++|+++|+++|++||+++|+||+|+|| |+|..++++++++.||++++||++++ |+|+|+++++
T Consensus 199 i~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 199 ILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIK 278 (412)
T ss_pred EeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCccceeEEEEc
Confidence 999999999999999999999999999999999999999999 99988888889999999999999997 9999999998
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEE
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGF 300 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~ 300 (368)
+++ +.+. ...+++|+++|+++++++.++++. +.++++.+++.+..++++++++.+...++ ....+++.|.++|+
T Consensus 279 ~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l 354 (412)
T TIGR02407 279 PEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGI 354 (412)
T ss_pred hhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEE
Confidence 876 5443 345778999999999999999995 77777999999999999999999877776 55678888999999
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+. +.....++.+.++++||.+.+.+. .. +.+++.++++|+++++++|++++++
T Consensus 355 ~l~-------------~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 355 ECG-------------DGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred Eec-------------ChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 883 233457889999999999987542 23 3478999999999999999999864
No 57
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=360.15 Aligned_cols=358 Identities=23% Similarity=0.261 Sum_probs=291.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcC-CCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+++||++|+|.+++.+++++. ....+.++...+++++|++.++ +.+.++|++||+||++.|+++++.++++.+||.+
T Consensus 633 ~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~ 712 (1013)
T PRK06148 633 VCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVL 712 (1013)
T ss_pred hhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4689999999999999999875 3345678889999999999998 4689999999999999999999999999999999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCC-CCCCCCCCCCcccccCCC--C-------HHHHHHHHH---cCCCCeEEEEEcc
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFN--D-------VSALENLFE---NNKGEIAAIILEP 148 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--d-------~~~le~~~~---~~~~~~~~~~~~~ 148 (368)
.++|||.+..++..++........+. ..++.....+..+..+++ + .+++++.+. .+++.++++++||
T Consensus 713 ~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EP 792 (1013)
T PRK06148 713 DHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAES 792 (1013)
T ss_pred cCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcC
Confidence 99999999888877653221111111 011111111222333443 2 245666664 2346799999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
+.+++|.+.+|++|+++++++|++||+++|.||+++|| |+|. .++++++++.||+++++|++++|+++|.++++++++
T Consensus 793 v~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~ 872 (1013)
T PRK06148 793 IPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIA 872 (1013)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHH
Confidence 99999999999999999999999999999999999999 9996 788999999999999999999999999999999999
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
+.+... ..+++||++|++++++++++++.++++++.++.++..++++++|+++..+++.+..+.+.|.++++++....
T Consensus 873 ~~~~~g--~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~ 950 (1013)
T PRK06148 873 DSFDNG--MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDR 950 (1013)
T ss_pred hhccCC--CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCc
Confidence 888632 236799999999999999999999889999999999999999999998888888899999999999986422
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.. +.+.......+.+.|+++||++.+.+. .. +.+++.++++++++++++|++++.++
T Consensus 951 ~~-----~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 951 KT-----KAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred cc-----cCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 10 112233457789999999999987643 22 35789999999999999999998753
No 58
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.3e-44 Score=331.02 Aligned_cols=356 Identities=27% Similarity=0.338 Sum_probs=281.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------ 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------ 73 (368)
++++||++|+|.+++.+++++... +.+.++...+|+++|++..+ +.+.++|++||++|++.|+++++.+.
T Consensus 60 ~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 139 (445)
T PRK09221 60 CCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQG 139 (445)
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999987432 24567888999999999987 57899999999999999999999773
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCc-ccccCCC---------CHHHHHHHHHcC-CCCe
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYE-TLTAPFN---------DVSALENLFENN-KGEI 141 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~---------d~~~le~~~~~~-~~~~ 141 (368)
++.+||.+.++|||.+..++..++.......+ +...++....... ....++. ..+++++.+... .+++
T Consensus 140 ~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~i 219 (445)
T PRK09221 140 TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTI 219 (445)
T ss_pred CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcE
Confidence 36789999999999998888777654322211 1111111000000 0000000 146788888754 3689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v 219 (368)
+++++||+++++|.+.++++|+++++++|++||+++|+||+++|| |+|..+.++++++.||++++||++++| +++|.+
T Consensus 220 Aavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av 299 (445)
T PRK09221 220 AAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAV 299 (445)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceee
Confidence 999999999999999999999999999999999999999999999 999988899999999999999999988 799999
Q ss_pred eehHHHHHHhcCCC----CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 220 GGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 220 ~~~~~~~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
++++++++.+.... ...+++|++++++++++++++++.++++++.++..++.+++++.|+++ .+++....+++.|
T Consensus 300 ~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l-~~~~~v~~vrg~G 378 (445)
T PRK09221 300 IASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSL-KGLPHVIDIRNIG 378 (445)
T ss_pred EEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh-ccCCCEEEEecCc
Confidence 99999988775321 234678999999999999999999988889999999999999999986 3455556788888
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.+..+++..... .......++.+.|+++||.+.+.+.. .+.|++.++++|+++++++|++++.++
T Consensus 379 l~~~v~~~~~~~--------~~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 379 LVAGIELAPRPG--------APGARGYEAFMKCFEKGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred eEEEEEEecccc--------cccchHHHHHHHHHHCCeEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 888888853210 01122457889999999999876532 234689999999999999999998764
No 59
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=306.11 Aligned_cols=353 Identities=42% Similarity=0.624 Sum_probs=286.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCce--
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRER-- 77 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~-- 77 (368)
...+||++|++.+++.+++.+..+ .++.+....++++.+.+..+ +.++|+|++|||+|++.|++.+++....+.
T Consensus 67 ~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~ 146 (433)
T KOG1401|consen 67 VTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE 146 (433)
T ss_pred ccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc
Confidence 567999999999999999988522 23333448889999988875 689999999999999999999998754444
Q ss_pred ----EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 78 ----IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 78 ----vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+|.+.++|||.+.+++...+...+..++. ..-+++...+++|..++++.+..+.+.++++++||+.+.+
T Consensus 147 ~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~-------p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaG 219 (433)
T KOG1401|consen 147 KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD-------PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAG 219 (433)
T ss_pred cceeEEEEecCcCCcchhHHHhhcccccCCCCC-------CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCC
Confidence 99999999999999999876544332221 1445788888999999999999987789999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~ 232 (368)
|..+..+||+..|..+|+++|++||.||+++|| |.|..++.+++++.||+.|++|.++||+|+|++.+++++++.+...
T Consensus 220 G~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~ 299 (433)
T KOG1401|consen 220 GIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPG 299 (433)
T ss_pred CcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCC
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999987
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecCCCcccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 311 (368)
...+|++||++|++++.++..+++.+.+.++++++.+..+.+++++.+...+.+..... .+.+.++++....+.... .
T Consensus 300 ~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~-~ 378 (433)
T KOG1401|consen 300 DHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKF-A 378 (433)
T ss_pred CccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhh-h
Confidence 77889999999999999999999999999999999999999999999988777654443 566677777665432111 1
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+...........+...+++.|+.+.|- ..+...+++|.++++++.+.+.+.++
T Consensus 379 d~~~~~~ll~~~~~~~~~~~gv~i~P~----~~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 379 DAAREQGLLILTLGKGLLEEGVRIAPI----YLLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred hhhhhhhHHHHHHhcccccceEEEecc----ccccccCcHHHHHHHHHHHHHHHHHh
Confidence 100001111122333344557888771 22344556899999999999988653
No 60
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-44 Score=322.56 Aligned_cols=322 Identities=27% Similarity=0.346 Sum_probs=269.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+++||+||++++++.+++++.... .++++...+++++++++. +.+.+++++||++|++.|+++++.++++++||.+
T Consensus 35 ~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~ 113 (364)
T PRK04013 35 VNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV-NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAM 113 (364)
T ss_pred hccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc-CCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEE
Confidence 5789999999999999999985332 356788999999999987 4579999999999999999999998888999999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
..+|||.+..++..++.+.....+. ....++..++++|++++++.+. ++++++++||+.+++|...++++
T Consensus 114 ~~syHG~t~~~ls~~~~~~~~~~~~-------p~~~~~~~~~~~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~ 183 (364)
T PRK04013 114 TNAFHGRTMGALSATWKPKYREDFE-------PLVPGFKHIPFNDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEE 183 (364)
T ss_pred CCccccCchhhccCCCCcccccCCC-------CCCCCcEEecCCCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHH
Confidence 9999999988887766533222111 1123455677789999999886 57999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 241 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~ 241 (368)
|++++.++|++||+++|+||+++|+|+|..+.++++++.||+++++|++++|+++|.++.++++ . ...+++||
T Consensus 184 yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lggG~P~~a~~~~~~~----~---~~~~~~T~ 256 (364)
T PRK04013 184 FVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGNGVPVSLTLTNFDV----E---RGKHGSTF 256 (364)
T ss_pred HHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEecccccCCceeEEEEecccc----c---CCCcCCCC
Confidence 9999999999999999999999999888888999999999999999999999999999888765 1 23478999
Q ss_pred CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 242 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 242 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
++|+++++++.++++.++++++.++.++. +.++. .+....+++.|.++++++.. + .
T Consensus 257 ~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~vRG~Gl~~gve~~~-------------~--~ 312 (364)
T PRK04013 257 GGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTTRGRGLMIGIVLKK-------------P--V 312 (364)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceeeeeCcEEEEEEeCC-------------c--H
Confidence 99999999999999999888887776654 22221 14456899999999999842 1 3
Q ss_pred HHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 322 ARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+.+.++++|+.+.+.+.+. +.|++.++++|+++++++|++++++
T Consensus 313 ~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 313 GKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred HHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 568899999999998876444 4578999999999999999999875
No 61
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.8e-44 Score=326.53 Aligned_cols=334 Identities=26% Similarity=0.377 Sum_probs=272.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc-----CCc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRE 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-----~~~ 76 (368)
++++||++|+|.+++.+++.+.... ...+++..+|++.+.+.. +.++++|++||++|++.|+++++.+. ++.
T Consensus 47 ~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~ 125 (395)
T PRK03715 47 VNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHS-CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAY 125 (395)
T ss_pred hccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhcc-CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCc
Confidence 6789999999999999998874322 245678888999988764 45799999999999999999998662 457
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+||.+.++|||.+...+..++.......+ |... .+...+++|++++++.+. ++++++++||+++++|.
T Consensus 126 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--------~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~ 194 (395)
T PRK03715 126 EIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--------GFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGV 194 (395)
T ss_pred EEEEECCCcCCChHHHHhhcCCcccccCCCCCCC--------CceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCC
Confidence 89999999999999888887654221111 1111 223345678999999886 47899999999999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+.++++|+++|+++|++||+++|+||+|+|| |+|..++++++++.||++++||++++|+++|.+++++++.. +. .
T Consensus 195 ~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G~p~~av~~~~~i~~-~~---~ 270 (395)
T PRK03715 195 IPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGGVPLAALLAKAEVAV-FE---A 270 (395)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCCcceEEEEEcccccc-cc---C
Confidence 9999999999999999999999999999999 99998888999999999999999999999999999888752 22 2
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..+++||+++++++++++++++.++++++.++++++.++++++|+++..+.++ ..+++.|.++.+++...
T Consensus 271 ~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~i-~~vrG~Glm~~i~l~~~--------- 340 (395)
T PRK03715 271 GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGL-EGERGEGLLRALLLGKD--------- 340 (395)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCCc-CeEEcceeEEEEEecCc---------
Confidence 34678999999999999999999988889999999999999999988766663 35778899999988421
Q ss_pred ccccHHHHHHHHHHHHc---CeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGMLEE---GVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~---Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
....+.+.+.+. ||.+.+...+.+ .+++.++++|+++++++|++++.++
T Consensus 341 -----~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 341 -----IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -----hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 123344444444 999976544444 4689999999999999999998764
No 62
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2e-44 Score=329.14 Aligned_cols=347 Identities=18% Similarity=0.241 Sum_probs=275.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------ 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------ 73 (368)
++++||++|++.+++.+++++..+. +.+++...+|+++|++..+ +.++++|++||++|++.|+++++.+.
T Consensus 51 ~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~ 130 (422)
T PRK05630 51 SAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHP 130 (422)
T ss_pred HhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 5689999999999999999885432 3567888999999999987 57899999999999999999999873
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccCCCC----HHHHHHHHHcCCCCeEEEEEc
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFND----VSALENLFENNKGEIAAIILE 147 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d----~~~le~~~~~~~~~~~~~~~~ 147 (368)
++.+|+.+.++|||.+..++..++... ....+ +..........+.....+.++ .+.+++.+. ++++++++|
T Consensus 131 ~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~E 207 (422)
T PRK05630 131 ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIE 207 (422)
T ss_pred CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEe
Confidence 467899999999999988887765311 11111 111111100001000111112 345555554 489999999
Q ss_pred cc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHH
Q 017633 148 PV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRD 224 (368)
Q Consensus 148 ~~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~ 224 (368)
|. .+.+|...++++|+++++++|++||+++|+||+++|| ++|..++++++++.||+++++|+++|| +++|+++++++
T Consensus 208 Pi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~ 287 (422)
T PRK05630 208 PIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDK 287 (422)
T ss_pred chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHH
Confidence 96 8889999999999999999999999999999999999 889888889999999999999999999 59999999999
Q ss_pred HHHHhcCC---CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 225 IMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 225 ~~~~~~~~---~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
+.+.+... +.+.+++||++|+++++++.++++.+.++++.+++.++.+++++.|+.+ .+.+....+++.|.++.++
T Consensus 288 i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l-~~~~~v~~vRg~Gl~~~ie 366 (422)
T PRK05630 288 VAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPL-AHLPGVADVRVLGAIGVVE 366 (422)
T ss_pred HHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccccEEEEE
Confidence 98887532 2346789999999999999999999988889999999999999999875 3455556788999999999
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+... .....+.+.++++|+++.+.+.. .+.|++.++++|+++++++|++++..
T Consensus 367 ~~~~-------------~~~~~~~~~~~~~Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 367 MEQP-------------VDMEEATQAAVDHGVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ECCc-------------ccHHHHHHHHHHCCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 8521 12357888999999999876532 23478999999999999999999853
No 63
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=2.8e-44 Score=330.20 Aligned_cols=340 Identities=21% Similarity=0.296 Sum_probs=272.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC---CCCCCChhHHHHHHHHHhhCC---CCC-eEEE-eCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFPSYLQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP---SIE-MVRF-VNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~---~~~-~v~~-~~~gt~a~~~al~~~~~~~~~ 75 (368)
++++||++|+|.+++.+++++.. .....++...+|++++++... +.+ .++| ++||++|++.|+++++.++++
T Consensus 50 ~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr 129 (425)
T PRK09264 50 ALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGR 129 (425)
T ss_pred hccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCC
Confidence 46799999999999999998632 123457788899999999752 233 5656 589999999999999999999
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC--------CCHHHHHHHHHcCC---CCeEEE
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF--------NDVSALENLFENNK---GEIAAI 144 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d~~~le~~~~~~~---~~~~~~ 144 (368)
.+||.+.++|||.+..++..++.......+... ...+..+|+ +|++++++.+.++. ++++++
T Consensus 130 ~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aav 202 (425)
T PRK09264 130 TNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVP-------LNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAV 202 (425)
T ss_pred CeEEEECCccCCccHHHHHhcCCcccccCCCCC-------CCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEE
Confidence 999999999999999888887654322111000 012233333 36788999987532 468999
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccC-Cccceeeeeh
Q 017633 145 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGGR 222 (368)
Q Consensus 145 ~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~~ 222 (368)
++||+.+++|.+.++++|+++|+++|++||+++|+||+|+|| |+|..+.++++++.||++++||++++ |+|+|+++++
T Consensus 203 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~ 282 (425)
T PRK09264 203 IVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIK 282 (425)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEc
Confidence 999999999999999999999999999999999999999999 88888888889999999999999997 8999999998
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHH-HHHccCCHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEeeccceEEE
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL-KRLKEPGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGF 300 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~ 300 (368)
+++ ..+. ...+++|+++|+++++++++++ +.+.++++.++++++.++++++|+++..+++. ...+++.|.++++
T Consensus 283 ~~i-~~~~---~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i 358 (425)
T PRK09264 283 PEL-DVWK---PGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGI 358 (425)
T ss_pred hhh-hccC---CCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEE
Confidence 886 3443 3346789999999999999999 66666679999999999999999988766653 3467778889898
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC--cc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--AG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+. +......+.+.++++||.+.+.+.. .+ .+++.++++++++++++|++++.+
T Consensus 359 ~l~-------------~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 359 DFG-------------DGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred Eec-------------ChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 873 2334578899999999999876532 22 357889999999999999998864
No 64
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-45 Score=300.71 Aligned_cols=342 Identities=26% Similarity=0.311 Sum_probs=291.7
Q ss_pred ceeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh-------c
Q 017633 3 QLIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF-------T 73 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~-------~ 73 (368)
+..+.||.||.+++++.++.++++.. -+.++...++.+.+.++++ .+.++-.++|.||++.|++++|.+ +
T Consensus 69 saVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~-~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip 147 (427)
T KOG1402|consen 69 SAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFG-YDKVLPMNTGAEAVETACKLARKWGYRKKNIP 147 (427)
T ss_pred hhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcC-cceeeecccchhHHHHHHHHHHHHHHhhccCC
Confidence 45788999999999999999985432 2345677788888888874 467888999999999999999855 1
Q ss_pred -CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 74 -GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 74 -~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
....|+...++|||.+.++..++..+.-+..+ |...+ .+..+|++|.++|+.+++. ++.+++++||+++
T Consensus 148 ~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~-------~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQG 218 (427)
T KOG1402|consen 148 KNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPG-------VVDKVPYGDAEALEVALKS--PNVAAFIVEPIQG 218 (427)
T ss_pred ccceeEEEecccccCceeeeEEecCCcchhhccCCCCCC-------cceeeccCCHHHHHHHhcC--CCeeEEEeecccc
Confidence 23456667999999999999998886433333 22222 2567889999999999996 6899999999999
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMV 229 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~ 229 (368)
..|.+.||++|+++.+++|.+|++++|.||+|+|+ |+|++.++++.++.||++.++|+++|| +|++.++++++++..+
T Consensus 219 EaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~ 298 (427)
T KOG1402|consen 219 EAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNI 298 (427)
T ss_pred ccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhcc
Confidence 99999999999999999999999999999999999 999999999999999999999999999 6999999999999887
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVY 308 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
. +.-|++||++|+++++++.++++.+.++.+.++.....+.++.+|+++..+.+ ....+++.|.+..+.+...+
T Consensus 299 ~---pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~-- 373 (427)
T KOG1402|consen 299 K---PGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSK-- 373 (427)
T ss_pred C---CCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccc--
Confidence 7 55699999999999999999999999999999999999999999999876654 45688999999999887543
Q ss_pred ccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 309 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
....++.+++-.|.++|+...|-....+| +++.++++|+++.+++|++.+.
T Consensus 374 -------~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 374 -------TSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred -------ccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 13456778899999999999987655554 6899999999999999998874
No 65
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.6e-43 Score=326.92 Aligned_cols=343 Identities=26% Similarity=0.331 Sum_probs=281.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc--------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-------- 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-------- 73 (368)
.+++||++|+|++++.+++++.... .+.++...+|++.++++++ .+.+++++||++|++.|+++++.+.
T Consensus 86 ~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~ 164 (474)
T PLN02624 86 AVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFG-YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPK 164 (474)
T ss_pred cccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcC-CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCC
Confidence 4579999999999999999985433 2567888999999999884 5799999999999999999998752
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++..|+.+.++|||.+..++...+.......+. ...+.+..++++|++.+++.++.++++++++++||+++++
T Consensus 165 ~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~ 237 (474)
T PLN02624 165 NEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG-------PLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEA 237 (474)
T ss_pred CCcEEEEECCCcCCCCHHHhhcCCCccccccCC-------CCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCC
Confidence 234688899999999998888776532221110 1112355678889999999998766789999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++|+++|.++|++||+++|+||+|+|| +.|..+..+..++.||++++||++++| +|+|++++++++++.+.
T Consensus 238 G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~- 316 (474)
T PLN02624 238 GVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK- 316 (474)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc-
Confidence 999999999999999999999999999999999 888777777788999999999999966 89999999988887775
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEeeccceEEEEeecCCCccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
...+++|+++++++++++.++++.+.++++.++..++.++++++|.++..+++. ...+.+.|.++.+.+....
T Consensus 317 --~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~---- 390 (474)
T PLN02624 317 --PGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK---- 390 (474)
T ss_pred --cCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC----
Confidence 334678889999999999999999877788889999999999999997666652 3346677888887764211
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+.+....++++.|+++||.+.+.+...++ +++.++++++++++++|++++.
T Consensus 391 -----~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 391 -----LGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLE 443 (474)
T ss_pred -----cChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 01234578999999999999987655554 4688999999999999998874
No 66
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.5e-43 Score=324.33 Aligned_cols=331 Identities=24% Similarity=0.303 Sum_probs=269.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~ 73 (368)
.+++||++|+|.+++.+++++.... ...++...+|+++++++.+ .+++++++||++|++.|+++++.+ +
T Consensus 51 ~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~ 129 (396)
T PRK04073 51 AVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTG-KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEP 129 (396)
T ss_pred hccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCC-CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCC
Confidence 3579999999999999999875332 3466788999999999875 469999999999999999999876 4
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++||.++++|||.+..++.+.+.+.....+ . ...+.+..++++|++++++.+. +++++++++|+++++
T Consensus 130 ~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~d~~~l~~~i~---~~~~~viiep~~~~~ 199 (396)
T PRK04073 130 NKAEIIACEGNFHGRTMAAVSLSSEEEYKRGF---G----PMLPGIKKIPYGDLEALKAAIT---PNTAAFLVEPIQGEA 199 (396)
T ss_pred CCCEEEEECCCcCCCCHHHHhhcCCcccccCC---C----CCCCCceEeCCCCHHHHHHhcc---cCeEEEEEcCccCCC
Confidence 56889999999999998888776643211111 0 0112345677779999999886 478999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccC-CccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++|+++|.++|++||+++|+||+|++| +.|..+..+..++.||++++||++++ |+|+|++++++++++.+..
T Consensus 200 G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~ 279 (396)
T PRK04073 200 GINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP 279 (396)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC
Confidence 999999999999999999999999999999999 77766666777889999999999995 5999999999999988863
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+.+|+++++++++++.++++.+.++++.++..++++++++.|+++. .+....+.+.|.++++++..
T Consensus 280 ---~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~~~i~~~~~~g~~~~~~~~~------- 347 (396)
T PRK04073 280 ---GSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEID--NPMIKEVRGRGLFIGVELNE------- 347 (396)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc--CCcccceecceEEEEEEecc-------
Confidence 346688899999999999999988777888899999999999988752 22233556677887877621
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHH
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l 365 (368)
...++++.|+++||.+.+.+...+| +++.++++++++++++|++++
T Consensus 348 --------~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 348 --------PARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred --------hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 2468899999999999876544554 468899999999999999876
No 67
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.6e-43 Score=322.02 Aligned_cols=335 Identities=27% Similarity=0.351 Sum_probs=274.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+++||++|++.+++.+++++... ..+++....++++++++.++. .+++++++||++|++.++++++. .++++++
T Consensus 54 ~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii 132 (398)
T PRK03244 54 VNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIV 132 (398)
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH-HCCCeEE
Confidence 578999999999999999987422 235667788999999999872 47999999999999999998876 4667888
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
.++++|||+....+...+.......+. ....++..+|++|++++++.+. +++++++++|+++++|.+.++
T Consensus 133 ~~~~~yhg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 133 AAEGGFHGRTMGALALTGQPAKRAPFE-------PLPGGVEHVPYGDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred EECCCcCCccHHHHhccCCcccccCCC-------CCCCCceEeCCCCHHHHHHhhc---CCeEEEEEecccCCCCCcCCC
Confidence 888999999888777765432211111 1123456677779999999885 478999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcccc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~ 238 (368)
++|+++|.++|++||+++|+||+|++| +.|..+.++..++.||+++|||++++|+|+|++++++++++.+.. ..+.
T Consensus 203 ~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~---~~~~ 279 (398)
T PRK03244 203 AGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTP---GLHG 279 (398)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccC---CCCc
Confidence 999999999999999999999999999 877766667788999999999999999999999999988888763 3466
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccccc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
+|++.|+++++++.++++.+.++++.+++.++.+++++.|+++. ++....+.+.|.++++.+..
T Consensus 280 ~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~v~g~g~~~~i~~~~-------------- 343 (398)
T PRK03244 280 STFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG--HPLVDHVRGRGLLLGIVLTA-------------- 343 (398)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC--CCceeeEeeccEEEEEEEec--------------
Confidence 88999999999999999988777889999999999999988752 33334566788898988731
Q ss_pred HHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhhC
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
....++.+.|+++||.+.+.+...+| +++.++++|+++++++|++++.++
T Consensus 344 ~~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 344 PVAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred cHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 13567899999999999886545544 467789999999999999998653
No 68
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-43 Score=349.58 Aligned_cols=357 Identities=24% Similarity=0.280 Sum_probs=285.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..++||++|+|.+++.+++.+.... .+..+...+++++|++.++ +.+.++|++||++|++.|+++++.++++.+||.+
T Consensus 594 ~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~ 673 (972)
T PRK06149 594 VTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSV 673 (972)
T ss_pred ccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEE
Confidence 3479999999999999999875433 2456788999999999997 5789999999999999999999999999999999
Q ss_pred cCCCCCCchhhhhhcCCCccccCC-CC-CCCCCCCCCCcccccCCC--C-----HHHHHHHHH---cCCCCeEEEEEccc
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGL-PD-SPGVPKGATYETLTAPFN--D-----VSALENLFE---NNKGEIAAIILEPV 149 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--d-----~~~le~~~~---~~~~~~~~~~~~~~ 149 (368)
..+|||.+..+...++........ .. ..++.....++.+..++. + .+++++.+. ++.++++++++||+
T Consensus 674 ~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv 753 (972)
T PRK06149 674 LEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPV 753 (972)
T ss_pred eCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEccc
Confidence 999999988776654431111000 00 011111112222332221 2 244444443 34468999999999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
.+++|.+.++++|++++.++|++||+++|+||+++|| ++|. ++.++++++.||++++||++++|+++|++++++++++
T Consensus 754 ~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~ 833 (972)
T PRK06149 754 YGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAE 833 (972)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHh
Confidence 9999999999999999999999999999999999999 9987 5688899999999999999999999999999999998
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+...+ .+++|+++|++++++++++++.++++++.++.++..++++++|+++..+++.+..+++.|.++++++.....
T Consensus 834 ~~~~~~--~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~ 911 (972)
T PRK06149 834 ALEAEG--YFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQ 911 (972)
T ss_pred hhccCC--cccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcc
Confidence 886422 345778999999999999999998899999999999999999999988888888999999999999853211
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. +.+.......+.+.|+++||.+.+.+. ..+ .++++++++++++++++|++++.+
T Consensus 912 ~-----~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 912 T-----LEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred c-----CCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 0 012233457899999999999998753 333 378999999999999999999865
No 69
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=5.6e-43 Score=321.66 Aligned_cols=348 Identities=20% Similarity=0.251 Sum_probs=272.6
Q ss_pred eeccCCCcHHHHH--HHHHHHHcCC-----CCCCCChhHHHHHHHHHhhC-C-CCCeEEEeCChHHHHHHHHHHHHHhc-
Q 017633 4 LIILFPSYLQVLA--ALGETMKKGT-----SFGAPCLLENVLAEMVISAV-P-SIEMVRFVNSGTEACMGVLRLARAFT- 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~--a~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~-~-~~~~v~~~~~gt~a~~~al~~~~~~~- 73 (368)
++++||++|+|.+ ++.+++.+.. ...+.++...++.+.+++.. + +.++++|++||+||++.|+++++.+.
T Consensus 56 ~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~ 135 (443)
T PRK08297 56 SSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKS 135 (443)
T ss_pred hhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhh
Confidence 5789999999999 9999997632 22456788899999999987 4 57899999999999999999998762
Q ss_pred -----------CCceEEEEcCCCCCCchhhhhhcCCCc-cccCCCCCCC--CCCCCC-----C-c---ccccCCCCHHHH
Q 017633 74 -----------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSPG--VPKGAT-----Y-E---TLTAPFNDVSAL 130 (368)
Q Consensus 74 -----------~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~-----~-~---~~~~~~~d~~~l 130 (368)
++.+||.+.++|||.+..++..++... ....++.... ++.... . . ....+.++++++
T Consensus 136 ~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (443)
T PRK08297 136 RKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQA 215 (443)
T ss_pred ccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHH
Confidence 246799999999999998888876422 1111111100 100000 0 0 111112246777
Q ss_pred HHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhh
Q 017633 131 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 209 (368)
Q Consensus 131 e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~ 209 (368)
++.+.+++++++++++||+.+++|.+.+|++|+++++++|++||+++|+||+++|| |+|..++++++++.||++++||+
T Consensus 216 ~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~ 295 (443)
T PRK08297 216 RAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKK 295 (443)
T ss_pred HHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccc
Confidence 88888777899999999999999999999999999999999999999999999999 99988889999999999999999
Q ss_pred ccCCccceeeeehHHHHHHhcC--CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 210 IGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 210 ~~~G~~iG~v~~~~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
++ +|.+++.+++.+.... .....+++|+++|+++++++.++++.+.++++.++..++.++++++|+++..+++.
T Consensus 296 l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 371 (443)
T PRK08297 296 TQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPA 371 (443)
T ss_pred cc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 84 4445454443322210 01234789999999999999999999988899999999999999999998777764
Q ss_pred ce-EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHH
Q 017633 288 AI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~ 364 (368)
.. .+++.|.++++++. +......+.+.|+++||.+.+.+...+ +|++.++++|+++++++|+++
T Consensus 372 ~~~~vrg~G~~~~i~~~-------------~~~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~ 438 (443)
T PRK08297 372 VVSNVRGRGLMCAFDLP-------------TTADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRA 438 (443)
T ss_pred cceeeeccceEEEEEec-------------CHHHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHH
Confidence 43 77888999999873 223356789999999999988764443 468999999999999999999
Q ss_pred HhhC
Q 017633 365 LRQI 368 (368)
Q Consensus 365 l~~~ 368 (368)
+.++
T Consensus 439 l~~~ 442 (443)
T PRK08297 439 LPEV 442 (443)
T ss_pred HHhh
Confidence 8764
No 70
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-42 Score=315.01 Aligned_cols=333 Identities=29% Similarity=0.391 Sum_probs=271.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
++++||++|++++++.+++++.... ....+...++++.+.+..+ .+.+++++||++|++.|+++++.++++++|+++
T Consensus 40 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~ 118 (377)
T PRK02936 40 VCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA-GDLVFFCNSGAEANEAALKLARKHTGKSKIVTF 118 (377)
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC-CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4589999999999999999874222 2346777888888887664 368999999999999999988877788889999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+++|||.+...+...+.......+. .....+..++++|++++++.+. ++++++++||+++++|...++++
T Consensus 119 ~~~~Hg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~ 188 (377)
T PRK02936 119 EQSFHGRTFGTMSATGQEKIKEGFG-------PLLPGFTHVPFNDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPA 188 (377)
T ss_pred CCCcCCCcHHhhhccCCccccccCC-------CCCCCceEeCCCCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHH
Confidence 9999999887777665422111111 1112345677789999999886 47899999999998888888999
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcccccc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t 240 (368)
++++|+++|++||+++|+||+|++| +.|..+..+.+++.||++++||++++|+|+||+++++++++.+.. ..+.+|
T Consensus 189 ~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~ig~v~~~~~~~~~~~~---~~~~~t 265 (377)
T PRK02936 189 FLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNGIPVGAMIGKKELGTAFGP---GSHGST 265 (377)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCCCccEEEEEcHHHHhhccC---CCCCCC
Confidence 9999999999999999999999999 777665666778889999999999999999999999999888863 345678
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
+++++++++++.++++.+..+++.++++++.+++++.|++.....+....+.+.|.++|+.+.. .
T Consensus 266 ~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~---------------~ 330 (377)
T PRK02936 266 FGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE---------------E 330 (377)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc---------------h
Confidence 8899999999999999886678899999999999999998765555544556677888888631 1
Q ss_pred HHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|.++||.+.+.+...+|+ ++.++++++++++++|++++
T Consensus 331 ~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 331 VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 4678899999999999887665654 47899999999999998864
No 71
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=3.8e-42 Score=318.23 Aligned_cols=349 Identities=36% Similarity=0.512 Sum_probs=282.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCC---CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+++||++|++++++.+++.....+.. ..+...++++.+++.++ +.+++++++||++|++.++++++.+.++++|+
T Consensus 47 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii 126 (413)
T cd00610 47 VLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKII 126 (413)
T ss_pred hhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEE
Confidence 457999999999999999977555433 37789999999999998 68999999999999999999988777889999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC-----------CHHHHHHHHHcCCCCeEEEEEcc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----------DVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
+++++||++....+...+... ..........++..+|++ |++++++.++++++++++++++|
T Consensus 127 ~~~~~yhg~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 199 (413)
T cd00610 127 SFEGAYHGRTLGALSLTGSKK-------YRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEP 199 (413)
T ss_pred EECCCcCCccHHHHHhcCCcc-------ccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 999999999888777765431 111111222345556665 78999999987656899999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
+++++|...++++|+++|+++|++||+++|+||+|+++ +.|..+..+.+++.||++++||++++|+|+||+++++++++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~ 279 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMD 279 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCccccEEEEEcHHHHH
Confidence 99999999999999999999999999999999999998 77766667778889999999999998899999999999988
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+. .....+.+|++.++++++++.++++.+.++++.+++.++.+++++.|+++....+.+....+.+.++++.+.....
T Consensus 280 ~~~-~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (413)
T cd00610 280 AFP-AGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRA 358 (413)
T ss_pred hhc-cCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCC
Confidence 862 1234566888999999999999999987778899999999999999998765544444556778888888753211
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l 365 (368)
.. .++.....++++.|+++||.+.+++...++ +++.++++++++++++|++++
T Consensus 359 ~~-----~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 359 TK-----PPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred cC-----CcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 00 012245678999999999999998544444 577889999999999998864
No 72
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.5e-42 Score=315.60 Aligned_cols=342 Identities=19% Similarity=0.181 Sum_probs=263.5
Q ss_pred ceeccCCCcHHHHHHHHHH--HHcCC-CCCCCChhHHHHHHHHHh----hCC-CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFPSYLQVLAALGET--MKKGT-SFGAPCLLENVLAEMVIS----AVP-SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~~--~~~~~-~~~~~~~~~~~l~~~l~~----~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.++++||++|+|.+++.++ ..... ...++++...++++.+.+ ..+ +.++++|++||++|++.|+++++.+.+
T Consensus 68 ~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~ 147 (464)
T TIGR00699 68 SSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYR 147 (464)
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 3578999999999999984 33321 123456677778888754 566 578999999999999999999987621
Q ss_pred ---------------------------CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcc-----c--
Q 017633 75 ---------------------------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYET-----L-- 120 (368)
Q Consensus 75 ---------------------------~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 120 (368)
+.+||.+.++|||.+..++..++........+......+...+.. .
T Consensus 148 ~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 227 (464)
T TIGR00699 148 SKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHV 227 (464)
T ss_pred hcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCccccccccc
Confidence 237999999999999999988765321110110011111000000 0
Q ss_pred ----ccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccc
Q 017633 121 ----TAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 195 (368)
Q Consensus 121 ----~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~ 195 (368)
....++++++++++.++.++++++++||+.+++|.+.++++|+++++++|++||++||+||+++|| ++|..++++
T Consensus 228 ~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e 307 (464)
T TIGR00699 228 KENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHE 307 (464)
T ss_pred ccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHH
Confidence 001124677888887666789999999999999999999999999999999999999999999999 889888999
Q ss_pred ccCCC--cchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHH
Q 017633 196 YFGVT--PDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITG 272 (368)
Q Consensus 196 ~~~~~--~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 272 (368)
++++. ||++++||+++ +|+ ++.++ .+.......+++|+++|+++++++.++++.++++++.++..+..+
T Consensus 308 ~~gv~~~PDi~t~gK~lg~gG~----~~~~~----~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~ 379 (464)
T TIGR00699 308 HWNLDDPPDMVTFSKKFQTAGY----FFHDP----AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGD 379 (464)
T ss_pred hcCCCCCCCEEEehhhhccCCc----cccch----hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99997 99999999996 564 22222 222223456889999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhcC-CceEEe--eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--cccc
Q 017633 273 ELTQGIIDAGKKAG-HAICGG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSL 347 (368)
Q Consensus 273 ~l~~~l~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~ 347 (368)
++++.|+++..+++ ....++ +.|.++++++. +......+.+.++++|+++.+.+...+ .|++
T Consensus 380 ~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~-------------~~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl 446 (464)
T TIGR00699 380 YLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP-------------DEAKRDKLLKKARNNGVNIGGCGVKAIRLRPML 446 (464)
T ss_pred HHHHHHHHHHHhCCCceeeecccCeEEEEEEecC-------------CHHHHHHHHHHHHHCCcEEecCCCCeEEEeCCC
Confidence 99999999877777 555776 88999998862 223357889999999999988764443 4689
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 017633 348 AHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 348 ~~~~~~i~~~~~~l~~~l 365 (368)
.++++|+++++++|++++
T Consensus 447 ~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 447 VFQKHHADIFLEIISKII 464 (464)
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 999999999999999874
No 73
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=4.4e-42 Score=314.96 Aligned_cols=350 Identities=21% Similarity=0.269 Sum_probs=277.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------ 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------ 73 (368)
..++||++|++.+++.+++++.... +.+++...++.+.+++..+ +.++++|++||++|++.|+++++.+.
T Consensus 56 ~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~ 135 (427)
T TIGR00508 56 AAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEK 135 (427)
T ss_pred HhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCC
Confidence 4589999999999999999875322 3467788999999999987 56899999999999999999998763
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcc-cccCC--CCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYET-LTAPF--NDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~--~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
++.+||.+.++|||.+...+...+... ....+ +..........+.. ...++ +|++++++.+.++.+++++|++||
T Consensus 136 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEP 215 (427)
T TIGR00508 136 NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEP 215 (427)
T ss_pred CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEec
Confidence 467899999999999888777765421 11101 10111100000001 11112 257888888876556899999999
Q ss_pred c-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCc-cceeeeehHHH
Q 017633 149 V-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDI 225 (368)
Q Consensus 149 ~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~-~iG~v~~~~~~ 225 (368)
+ .+.+|...++.+|+++|+++|++||+++|+||+|+|| ++|..+..+++++.||++++||+++||+ +++.++.++++
T Consensus 216 v~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~ 295 (427)
T TIGR00508 216 IVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKV 295 (427)
T ss_pred hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHH
Confidence 7 7778899999999999999999999999999999999 8888888888999999999999999994 99999999999
Q ss_pred HHHhcCC--CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 226 MEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 226 ~~~~~~~--~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
++.+... ..+.+++|+.+|++++++++++++.+.++++.++++++.+++++.|+++. ..+....+.+.|.++.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 296 AQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEEC
Confidence 8888642 23457789999999999999999999888899999999999999999864 33334467788999999884
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. +.....+.+.|+++||.+.+.+.. .+.+++.++++|++++++++++++.+
T Consensus 375 ~-------------~~~~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 375 K-------------PVNVEELQKKFVEQGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred C-------------ccCHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 2 112367899999999999876432 12468889999999999999999865
No 74
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.3e-41 Score=309.28 Aligned_cols=335 Identities=27% Similarity=0.376 Sum_probs=273.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC-----c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR-----E 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~-----~ 76 (368)
.+++||++|++.+++.+++.+... ..++++...++++++++.. +.+++++++||++|++.++++++.+.++ +
T Consensus 50 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~ 128 (396)
T PRK02627 50 VNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELS-GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKP 128 (396)
T ss_pred hccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhc-CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCC
Confidence 568999999999999999876421 2346788999999999986 4589999999999999999988776554 7
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.++++.++|||.........+.......+.. .......++++|++++++++. +++++++++|+++++|..
T Consensus 129 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~ 198 (396)
T PRK02627 129 EIITAENSFHGRTLATLSATGQPKYQEGFEP-------LVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVN 198 (396)
T ss_pred eEEEECCCcCcccHHHHHhcCCccccccCCC-------CCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCc
Confidence 8999999999998887777655332111110 012234566779999999985 579999999998888877
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
.++++++++|.++|++||++||+||+|++| +.|..+..+..++.||+++|||++++|+|+||+++++++++.+.. .
T Consensus 199 ~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~rig~~~~~~~~~~~~~~---~ 275 (396)
T PRK02627 199 PADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTP---G 275 (396)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCCcccEEEEEcHHHHhccCC---C
Confidence 888889999999999999999999999999 777666666778889999999999999999999999998888763 3
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
.+..+++.++++++++.++++.+.++++.++++++.++++++|.++...++....+.+.|.++|+.+.
T Consensus 276 ~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~------------ 343 (396)
T PRK02627 276 DHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD------------ 343 (396)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec------------
Confidence 35678899999999999999988777888999999999999999887666544456667788888761
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..++++.|+++||.+.+++...+++ ++.++++++++++++|++++++
T Consensus 344 ---~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 344 ---RPAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ---CcHHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 124789999999999999976555554 5688999999999999999865
No 75
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.5e-41 Score=309.69 Aligned_cols=342 Identities=19% Similarity=0.235 Sum_probs=264.3
Q ss_pred eeccCCCcHHHH--HHHHHHHHcCCC-----CCCCChhHHHHHHHHHhhC-C-CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 4 LIILFPSYLQVL--AALGETMKKGTS-----FGAPCLLENVLAEMVISAV-P-SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 4 ~~~~g~~~~~v~--~a~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~-~-~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.+++||++|+|. +++.+++.+... .....+...++.+.|++.. + +.+.++|++||++|++.|+++++.+++
T Consensus 49 ~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~ 128 (431)
T TIGR03251 49 SMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKS 128 (431)
T ss_pred hcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhh
Confidence 578999999999 999999887421 1345677788888888886 3 578999999999999999999987741
Q ss_pred ------------CceEEEEcCCCCCCchhhhhhcCCCccccC-CCCCCCCCCCCCCc------------ccccCCCCHHH
Q 017633 75 ------------RERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYE------------TLTAPFNDVSA 129 (368)
Q Consensus 75 ------------~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~d~~~ 129 (368)
+.+||.+.++|||.+..++..++....... .+.... .+...+. ......+++++
T Consensus 129 ~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 207 (431)
T TIGR03251 129 RHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDW-PRIDNPKLTFPLDAPNLDQVIALEEEALRQ 207 (431)
T ss_pred cchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCC-ccCCCCcccCCccccccchhhHHHHHHHHH
Confidence 367999999999999998888765322111 111100 0000000 01111124667
Q ss_pred HHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhh
Q 017633 130 LENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK 208 (368)
Q Consensus 130 le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK 208 (368)
+++.+.+++++++++++||+++++|.+.++++|+++|.++|++||++||+||+++|| ++|..++++++++.||++++||
T Consensus 208 ~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK 287 (431)
T TIGR03251 208 ARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287 (431)
T ss_pred HHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecc
Confidence 777887777899999999999999999999999999999999999999999999999 8888888899999999999999
Q ss_pred hccCCccceeeeehHHHHHHhc--CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 017633 209 IIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 286 (368)
Q Consensus 209 ~~~~G~~iG~v~~~~~~~~~~~--~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 286 (368)
++. +|.++..+++.+... ......+++|+++|+++++++.++++.+.++++.+++.++.+++++.|+++..+.+
T Consensus 288 ~~~----~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 363 (431)
T TIGR03251 288 KTQ----VCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFP 363 (431)
T ss_pred cCc----cceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 973 344444443322111 00123467899999999999999999998888899999999999999999877666
Q ss_pred -CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHH
Q 017633 287 -HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~ 363 (368)
.+..+++.|.++.+++. +......+.+.|+++||++.+.+...+ ++++.++++|+++++++|++
T Consensus 364 ~~i~~vrg~G~~~~i~~~-------------~~~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 364 HLVSNPRGRGLMCAFDLP-------------STADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred cceecccccceeEEEEeC-------------CHHHHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 66677788888888873 223356789999999999988764444 47899999999999999976
No 76
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=4.4e-42 Score=306.10 Aligned_cols=290 Identities=36% Similarity=0.517 Sum_probs=245.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHH------Hhc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR------AFT 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~------~~~ 73 (368)
.++|||++|++.+++.+++.+... ..++++...+|.+.|.+..| +.+++++++||++|++.|+++++ ..+
T Consensus 27 ~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~ 106 (339)
T PF00202_consen 27 SVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYT 106 (339)
T ss_dssp TTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccccccccc
Confidence 478999999999999999988644 34677889999999999997 68999999999999999999999 667
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHH----------HHHHHH-cCCCCeE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSA----------LENLFE-NNKGEIA 142 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----------le~~~~-~~~~~~~ 142 (368)
++.+|+.+.++|||.+..++..++.+.....+.. ....+..+|+.++.. +++.+. .+.++++
T Consensus 107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~-------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia 179 (339)
T PF00202_consen 107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGP-------LYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIA 179 (339)
T ss_dssp TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCS-------SSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred CCceEEEeeeeeeccCcccccccCCccccccccc-------cccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEE
Confidence 8999999999999999988888666443322211 112235566666544 444443 2346899
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeee
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGG 221 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~ 221 (368)
++++||+.+++|...++++|+++|+++|++||+++|+||+++|| |+|..+.++++++.||++++||++++|+++|.+++
T Consensus 180 avivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~p~sav~~ 259 (339)
T PF00202_consen 180 AVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGLPISAVLG 259 (339)
T ss_dssp EEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTSSEEEEEE
T ss_pred EEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhhhcccccc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999998899999999
Q ss_pred hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 222 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
++++.+.+.. ..+++|++.+++++++++++++.++++++.+++.++.++++++|+++..+++.+..+++.|.+++++
T Consensus 260 ~~~i~~~~~~---~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie 336 (339)
T PF00202_consen 260 SEEIMEAFQP---GSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIE 336 (339)
T ss_dssp EHHHHTTSCT---TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEE
T ss_pred cchhhccccc---cccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEE
Confidence 9999988863 3388999999999999999999999999999999999999999998887778889999999999998
Q ss_pred ee
Q 017633 302 FT 303 (368)
Q Consensus 302 ~~ 303 (368)
+.
T Consensus 337 ~~ 338 (339)
T PF00202_consen 337 LV 338 (339)
T ss_dssp ES
T ss_pred EE
Confidence 74
No 77
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=1e-40 Score=306.28 Aligned_cols=339 Identities=22% Similarity=0.278 Sum_probs=272.3
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------cC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TG 74 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~~ 74 (368)
.++||++|+|++++.+++++.... .+..+...+++++++++++ .+.+++++||++|++.|+++++.+ ++
T Consensus 49 ~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~ 127 (401)
T TIGR01885 49 VNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFG-YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPEN 127 (401)
T ss_pred ccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcC-CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCC
Confidence 469999999999999998874322 2356788999999999985 479999999999999999998765 24
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
++.|+.+..+|||.+...+..++.......+ .. ....+..++++|++++++.+++++++++++++||+++++|
T Consensus 128 ~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G 200 (401)
T TIGR01885 128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNF---GP----YVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAG 200 (401)
T ss_pred CCEEEEECCCcCcccHHHHhCcCCccccccc---CC----CCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCC
Confidence 6788899999999988888776543211111 10 1123566788899999999976556789999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~ 232 (368)
.+.++++|+++|+++|++||+++|+||+|+++ +.|..+..+..++.||++++||++++| +|+|++++++++++.+..
T Consensus 201 ~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~- 279 (401)
T TIGR01885 201 VVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP- 279 (401)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC-
Confidence 99999999999999999999999999999999 777766666678889999999999965 899999999999888763
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
..+.+|++.++++++++.++++.+.++++.++..++.+++++.|+++. .+....+.+.|.++.+.+....
T Consensus 280 --~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~--~~~~~~~~g~g~~~~i~~~~~~------ 349 (401)
T TIGR01885 280 --GEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP--KPIITEVRGRGLLNAIVIDESK------ 349 (401)
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc--CCceeEEeecCeeEEEEeccCc------
Confidence 235578889999999999999999777788888888888888888763 2333456678888887764211
Q ss_pred hcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 313 AKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
......++++.|.++||.+.+.+...+| +++.++++++++++++|+++++
T Consensus 350 ----~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 350 ----TGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred ----chhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 0124578999999999999987655554 4678999999999999998763
No 78
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=3.4e-40 Score=304.00 Aligned_cols=356 Identities=26% Similarity=0.352 Sum_probs=277.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC---CCChhHHHHHHHHHhhCC-CC-CeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~-~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||++|++.+++.+++++..+.. ..++...++++.+++..+ +. ++++|++||++|++.|+++++.++++..|
T Consensus 52 ~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~i 131 (425)
T PRK08088 52 VLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGV 131 (425)
T ss_pred hcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeE
Confidence 46799999999999999998753221 235677899999999886 33 69999999999999999999999888899
Q ss_pred EEEcCCCCCCchhhhhhcCCCc-cccCCCC-CCCCCCCCCC-cccccCCC-CHHHHHHHHH--cCCCCeEEEEEcccCCC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV-ATLGLPD-SPGVPKGATY-ETLTAPFN-DVSALENLFE--NNKGEIAAIILEPVVGN 152 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~~~~-d~~~le~~~~--~~~~~~~~~~~~~~~~~ 152 (368)
|.+.++|||.+..+...++... ....+.. ..++.....+ +......+ +++++++.+. +++++.+++++||+.++
T Consensus 132 v~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~ 211 (425)
T PRK08088 132 IAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGE 211 (425)
T ss_pred EEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCC
Confidence 9999999999988887765321 1111100 0111000000 00000000 1567888886 33468999999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
+|.+.++++++++|.++|++||+++|+||+|+++ +.|..+.++..++.||+.+|||++++|+|+||+++++++++.+..
T Consensus 212 ~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~ 291 (425)
T PRK08088 212 GGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAP 291 (425)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCC
Confidence 9999999999999999999999999999999999 777766677788899999999999999999999999999988873
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+.+|++++++.++++.+.++.+..+++.+++++..+++++.+.++....+....+.+.|.++|+.+.....
T Consensus 292 ---~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~---- 364 (425)
T PRK08088 292 ---GGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGD---- 364 (425)
T ss_pred ---CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCC----
Confidence 3467889999999999999999887788999999999999999999877777656677779999999853210
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCC--Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.|+.....++...++++||.+.+.+. +.++ +++.++++++++++++|++++.+
T Consensus 365 -~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 365 -HSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred -CCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 0112344568899999999998876542 3334 45678999999999999999865
No 79
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.3e-40 Score=306.10 Aligned_cols=335 Identities=24% Similarity=0.288 Sum_probs=267.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~ 73 (368)
.+++||++|++.+++.+++++.... ....+...++.++++++.+. +++++++||++|++.|+++++.+ +
T Consensus 52 ~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~ 130 (401)
T PRK00854 52 AVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS-HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPE 130 (401)
T ss_pred hccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCC
Confidence 3579999999999999999885332 24567888999999998864 68999999999999999999765 2
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++||++..+|||.+...+..++.+.....+ ......+..++++|++++++.+. +++++++++|+++++
T Consensus 131 ~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~le~~i~---~~~~aii~e~~~~~~ 200 (401)
T PRK00854 131 GQAEIIVCADNFHGRTLSIVGFSTDPDARGGF-------GPFTPGFRVVPFGDAEALEAAIT---PNTVAFLVEPIQGEA 200 (401)
T ss_pred CCceEEEECCCcCCccHHHHhccCCccccccC-------CCCCCCeEEeCCCCHHHHHHHhC---CCeEEEEEccccCCC
Confidence 45789999999999987777665443211111 11123456678889999999996 478999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++|+++|+++|++||+++|+||+|+|+ +.|..+..+..++.||++++||++++| +|+|++++++++++.+..
T Consensus 201 G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~ 280 (401)
T PRK00854 201 GVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP 280 (401)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC
Confidence 999999999999999999999999999999988 766655556678889999999999977 799999999999887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..++.+++.++++++++.++++.+.++++.++++++.+++++.|+++.. .......+.+.++.+.+..
T Consensus 281 ---~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~g~g~~~~i~~~~------- 348 (401)
T PRK00854 281 ---GQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRS--NIVREVRGRGLMLAVELEP------- 348 (401)
T ss_pred ---CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhcc--CceEEEeccceEEEEEEec-------
Confidence 3356788889999999999999887677889999999999999987632 2223445667777776532
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+.....++++.|+++||.+.+.+...+| +++.++++++++++++|++++.
T Consensus 349 -----~~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 349 -----EAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -----CchhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 1223578999999999999876545555 4578899999999999998874
No 80
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=3e-40 Score=303.51 Aligned_cols=340 Identities=30% Similarity=0.505 Sum_probs=262.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE-c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF-E 82 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~-~ 82 (368)
++++||++|+|.+++.+++++...+..++....++++.|.+.+++.+.++|++||++|++.|+++++.++++..|+.+ .
T Consensus 59 ~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~ 138 (431)
T PRK06209 59 AVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCAD 138 (431)
T ss_pred chhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEecc
Confidence 467999999999999999998766666666677899999999876689999999999999999999999888888888 6
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
.+||+...... +. .+...+...........++++|++++++++.+++++++++++||+.++ .++.+|
T Consensus 139 ~~~h~~~~~~~---g~------~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~ 205 (431)
T PRK06209 139 HPFFSTDDWFI---GT------TPMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGF 205 (431)
T ss_pred Ccccccccccc---cc------CCCCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHH
Confidence 77776321110 00 000011110111224556788999999999876668999999998765 778899
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHH--hcC---CCCcc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM--VAP---AGPMY 236 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~--~~~---~~~~~ 236 (368)
+++|.++|++||+++|+||+|+|| +. ..+...++++.||++++||++++|+++|++++++++++. +.. .+.+.
T Consensus 206 l~~l~~lc~~~g~lLI~DEv~tG~~~~-~~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~ 284 (431)
T PRK06209 206 LHEVRRLCHENGALFILDEMITGFRWH-MRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFL 284 (431)
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCcC-cchhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCcee
Confidence 999999999999999999999998 42 223333579999999999999999999999999998886 321 12345
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
+++|+++|++++++++++++.++++++.+++.++.+++++.|+++..+++....+.+.|.+..+.+...... ..+
T Consensus 285 ~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~-----~~~ 359 (431)
T PRK06209 285 LSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGN-----GQP 359 (431)
T ss_pred eccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcc-----cCC
Confidence 788999999999999999999988889999999999999999998777777666666666656555321100 001
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.......+.+.|+++|+.+. .++++..++++|++++++++++++.+
T Consensus 360 ~~~~~~~~~~~l~~~Gi~~p-----~l~is~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 360 SQAFRTLFLQETIRRGVLMP-----SLVVSYAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred cHHHHHHHHHHHHHCCcccc-----cccccccCCHHHHHHHHHHHHHHHHH
Confidence 12223478888999999873 34566788999999999999998864
No 81
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=304.30 Aligned_cols=341 Identities=24% Similarity=0.304 Sum_probs=270.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~ 73 (368)
..++||++|+|++++.+++++..... +.++...++++.+++.. +.+.+++++||++|++.++++++.+ .
T Consensus 42 ~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~ 120 (400)
T PTZ00125 42 AVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF-GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPE 120 (400)
T ss_pred hccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC-CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCC
Confidence 45799999999999999988743221 23566777777777765 4579999999999999999988643 1
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++|++++++|||.....+...+.......+ ... ...+..++++|++++++.++ .+++++++++|+++++
T Consensus 121 ~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~d~~~le~~l~--~~~~~~v~~ep~~~~~ 191 (400)
T PTZ00125 121 NQAKIIFCNGNFSGRTIGACSASTDPKCYNNF---GPF----VPGFELVDYNDVEALEKLLQ--DPNVAAFIVEPIQGEA 191 (400)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCcchhccC---CCC----CCCceEeCCCCHHHHHHHhC--CCCeEEEEEcCccCCC
Confidence 35789999999999998888776542211111 110 11244566679999999996 2479999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++|+++|+++|++||+++|+||+|+++ +.|..+..+.+++.||++++||++++| +|+||+++++++++.+..
T Consensus 192 G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~ 271 (400)
T PTZ00125 192 GVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP 271 (400)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC
Confidence 999999999999999999999999999999988 777666666788899999999999977 599999999999888763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+..+++.+++.++++.++++.+.++++.++..++.++++++|+++....+....+.+.|.++++.+...
T Consensus 272 ---~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~------ 342 (400)
T PTZ00125 272 ---GEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHS------ 342 (400)
T ss_pred ---CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccC------
Confidence 23557788999999999999998877788889999999999999887555555445667788888876321
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.....++++.|+++||.+.+++...+|+ ++.++++++++++++|++++.++
T Consensus 343 -----~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 343 -----DGVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred -----cchHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 12346789999999999999876666665 47799999999999999988653
No 82
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=3e-40 Score=318.06 Aligned_cols=357 Identities=19% Similarity=0.227 Sum_probs=273.1
Q ss_pred eeccC-CCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHH-hc---
Q 017633 4 LIILF-PSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARA-FT--- 73 (368)
Q Consensus 4 ~~~~g-~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~-~~--- 73 (368)
++++| |++|++.+++.+++.+..+. ++.+++..+|+++|.+..+ + .++|+|++||++|++.|+++++. +.
T Consensus 376 ~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~ 455 (817)
T PLN02974 376 TQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDH 455 (817)
T ss_pred HhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhc
Confidence 45788 58999999999999986543 3568899999999999655 3 58999999999999999999953 41
Q ss_pred ---------------CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CC-CC-CCCCCCCCc--------ccccCCC--
Q 017633 74 ---------------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PD-SP-GVPKGATYE--------TLTAPFN-- 125 (368)
Q Consensus 74 ---------------~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~--------~~~~~~~-- 125 (368)
++.+||.+.++|||.+..++..++.......+ .. .. ...+...+. .+.+|..
T Consensus 456 G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~ 535 (817)
T PLN02974 456 GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFS 535 (817)
T ss_pred CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccc
Confidence 35679999999999999999988753222111 00 00 000000000 0000100
Q ss_pred -----------------------------CHHHHHHHHHc-----CCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHH
Q 017633 126 -----------------------------DVSALENLFEN-----NKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRIT 170 (368)
Q Consensus 126 -----------------------------d~~~le~~~~~-----~~~~~~~~~~~~~-~~~~g~~~~~~~~l~~i~~l~ 170 (368)
..+.+++.+.+ ++++++++++||+ .+.+|++.++++|+++++++|
T Consensus 536 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc 615 (817)
T PLN02974 536 SGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615 (817)
T ss_pred ccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 02567777753 3468999999996 788999999999999999999
Q ss_pred HHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCC---CCccccccCCCCH
Q 017633 171 KENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNP 245 (368)
Q Consensus 171 ~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~---~~~~~~~t~~~~~ 245 (368)
++||++||.||+++|| |+|..++++++++.||+++++|+++|| +|+|.+++++++.+.+... ..+.+++||++|+
T Consensus 616 ~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnp 695 (817)
T PLN02974 616 RSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHP 695 (817)
T ss_pred HHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCH
Confidence 9999999999999999 999999999999999999999999999 6999999999999988531 2456899999999
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHH----HHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKIT----GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
+++++++++++.++++++.+++.++. +++.+.|.+.+.+++.+..+++.|.++++++....... ......+
T Consensus 696 l~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~-----~~~~~~a 770 (817)
T PLN02974 696 MGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGS-----GYSSLYA 770 (817)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCccc-----ccchHHH
Confidence 99999999999998876555555555 44455554444557777899999999999997532110 0011235
Q ss_pred HHHHHHHH-HcCeeecCCCCCc-cccccCCCHHHHHHHHHHHHHHH
Q 017633 322 ARFYRGML-EEGVYFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 322 ~~~~~~l~-~~Gi~~~~~~~~~-~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..+.+.++ ++|+++++.++.. +.+++.++++++++++++|.+.|
T Consensus 771 ~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 771 RSVVRRLRREDGIYARPLGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHhCCEEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 67888899 9999999876432 24688999999999999999876
No 83
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.6e-39 Score=292.91 Aligned_cols=331 Identities=27% Similarity=0.330 Sum_probs=260.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..++|| +|++++++.+++.....+ ++....++++.+++.+. . ...+++++||++|++.|+++++.+.++++|+++
T Consensus 40 ~~~lG~-~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~ 116 (375)
T PRK04260 40 VTNLGF-HPQVQQALQKQAGLIWHS--PNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITF 116 (375)
T ss_pred cccCCC-CHHHHHHHHHHHHhcCcc--cCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEE
Confidence 467999 899999999999864322 11222344444444332 2 235789999999999999999888788899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+.+|||+....+..++.......+.. .+ ..+...+++|++++++.+. +++++++++|+++++|.+.++.+
T Consensus 117 ~~~yHg~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~dl~~l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~ 186 (375)
T PRK04260 117 QNSFHGRTFGSMSATGQDKIKDGFGD--GV-----PHFSYAIFNDLNSVKALVN---KNTAAVMLELVQGESGVLPADKD 186 (375)
T ss_pred CCCcCcccHHHHhccCCcccCCCCCC--CC-----CCeEEeCCCCHHHHHHhcC---CCeEEEEECCeECCCCCcCCCHH
Confidence 99999998877766654322111110 00 1122234568999998885 46899999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcccccc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t 240 (368)
|++++.++|+++|+++|+||+|+++ +.|..+....+++.||++||||++++|+|+|++++++++.+.+.. ..+.+|
T Consensus 187 ~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~---~~~~~t 263 (375)
T PRK04260 187 FVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANGVPVGAMLAKSSLGGAFGY---GSHGST 263 (375)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCCcceEEEEEcHHHHhhcCC---CCCCCC
Confidence 9999999999999999999999998 766655666778899999999999999999999999998888763 346688
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
+++++++++++.++++.+..+++.++++++.+++++.+.+.+.+.+....+.+.+.++|+++.. .
T Consensus 264 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~---------------~ 328 (375)
T PRK04260 264 FGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTA---------------D 328 (375)
T ss_pred CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecC---------------c
Confidence 9999999999999999887778899999999999999999877766555666788898988621 1
Q ss_pred HHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|+++||.+.+.+...++ +++.++++|+++++++|++++
T Consensus 329 ~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 329 LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 367899999999999887655444 468889999999999998763
No 84
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=4.4e-38 Score=287.77 Aligned_cols=332 Identities=29% Similarity=0.396 Sum_probs=261.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC-----Cc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG-----RE 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~-----~~ 76 (368)
.+++||.+|.+.+++.+++.+... ..++.+...+|+++++++++ .+++++++||++|+..++++++.+.+ ++
T Consensus 38 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~ 116 (379)
T TIGR00707 38 VNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSG-ADRVFFCNSGAEANEAALKLARKYTGDKGKEKK 116 (379)
T ss_pred hccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC-CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCC
Confidence 579999999999999999887421 23467889999999999995 45999999999999999988765443 68
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++++++||++...+...++....... .. ....+...++++|++++++.++ +++++++++|+++++|..
T Consensus 117 ~vi~~~~~yh~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~ 186 (379)
T TIGR00707 117 KIIAFENSFHGRTMGALSATGQPKYQKG-----FE--PLVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVN 186 (379)
T ss_pred eEEEECCCcCCccHHHHHhcCChhhhcc-----CC--CCCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCc
Confidence 9999999999998777766554321100 00 1112334456668999999987 368899999998888877
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
.++.+++++|.++|++||+++|+||+|++| +.|........+..||+++|||++++|+|+||+++++++++.+.. .
T Consensus 187 ~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~~---~ 263 (379)
T TIGR00707 187 PASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTP---G 263 (379)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCCcccEEEEEcHHHHhhhcC---C
Confidence 678888999999999999999999999988 655544445567788999999999999999999999999888874 2
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
....+++.++++++++.++++.+..+++.+++++++++++++|++.+...+. ....+.+.++++.+..
T Consensus 264 ~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~----------- 331 (379)
T TIGR00707 264 DHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEA----------- 331 (379)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecC-----------
Confidence 2446678899999999999998866678899999999999999987655443 2333456777876521
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
+..++++.|.++||.+.+.+...+|+ ++..+++++++++++|++++
T Consensus 332 ----~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 332 ----PCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred ----cHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 14788999999999999976555665 45789999999999998764
No 85
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=253.67 Aligned_cols=354 Identities=20% Similarity=0.266 Sum_probs=282.2
Q ss_pred cCCCcHHHHHHHHHHHHcC-CCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 7 LFPSYLQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
-||.+|+|+++...++... .+..+...-..+.++.|...+++.+-++|++||++|+.+|+++++.++++.++|..+..|
T Consensus 59 vghchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAY 138 (452)
T KOG1403|consen 59 VGHCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAY 138 (452)
T ss_pred cccCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechh
Confidence 4789999999999988874 344455566678888888888889999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCC-------C-----HHHHHHHHHc---CCCCeEEEEEccc
Q 017633 86 HGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFN-------D-----VSALENLFEN---NKGEIAAIILEPV 149 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------d-----~~~le~~~~~---~~~~~~~~~~~~~ 149 (368)
||+....+..+..++........ +.+.-...++++...+. | .+.+++.+.. ....+++++.|..
T Consensus 139 HGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEsl 218 (452)
T KOG1403|consen 139 HGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESL 218 (452)
T ss_pred ccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 99988777766443322111111 11111122223322221 1 3455665542 2245789999999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
.+-+|.+.||++|++++++..+.+|.+.|.||++.|| |.|.. ++++.++..||+++++|.+|.|.|++.++..+++.+
T Consensus 219 QSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~ 298 (452)
T KOG1403|consen 219 QSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQ 298 (452)
T ss_pred HhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHH
Confidence 9999999999999999999999999999999999999 88874 888999999999999999999999999999999999
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+...+.. .++||++||++++++++.++.++++++.++..+..+++.+.|+++..++...-.+++.|.|+++++.+..
T Consensus 299 Af~atgv~-YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~- 376 (452)
T KOG1403|consen 299 AFHATGVE-YFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDR- 376 (452)
T ss_pred Hhccccce-ehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeeccc-
Confidence 99865433 4589999999999999999999999999999999999999999998888888899999999999997532
Q ss_pred cccchhcccccHHHHHHHHHHHHc-CeeecCCCCCc----cccccCCCHHHHHHHHHHHHHHHh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEA----GFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~----~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.. ..|+...+..+..+|++. ||.++..|... +-++.+.++++.++++..|+++|.
T Consensus 377 ---~t-RtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 377 ---KT-RTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ---cc-CCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 11 113444566677788775 79998876443 236888899999999999998874
No 86
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-34 Score=258.32 Aligned_cols=326 Identities=18% Similarity=0.176 Sum_probs=230.6
Q ss_pred eeccCCC------cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-------CCC-eEEEeCChHHHHHHHHHHH
Q 017633 4 LIILFPS------YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-------SIE-MVRFVNSGTEACMGVLRLA 69 (368)
Q Consensus 4 ~~~~g~~------~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------~~~-~v~~~~~gt~a~~~al~~~ 69 (368)
++.|+.+ ++++++++.+++.+...++++.....+|++++++++. .++ +|++|+|+++|+..++...
T Consensus 30 vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~ 109 (393)
T COG0436 30 VIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLAL 109 (393)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHh
Confidence 4556554 4579999999888753144477778888888887663 234 4999999999999999766
Q ss_pred HHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 70 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 70 ~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
..++|.||+++|.|..+.......++..+.........++.. |+++++++++ +++++++++..
T Consensus 110 --~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~------------d~~~l~~~i~---~ktk~i~ln~P 172 (393)
T COG0436 110 --LNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKP------------DLEDLEAAIT---PKTKAIILNSP 172 (393)
T ss_pred --cCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcC------------CHHHHHhhcC---ccceEEEEeCC
Confidence 357889999999998875555555555443322111122221 8999999999 47888888777
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccc-cccC---CCcchhhhhhhcc-CCccceeeeeh
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQ-EYFG---VTPDLTTLGKIIG-GGLPVGAYGGR 222 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~-~~~~---~~~di~s~sK~~~-~G~~iG~v~~~ 222 (368)
+|++|.+.++++ +++|+++|++||+++|+||+|.++ +.+. ..+. +..+ ....+.||||.++ +|||+||++++
T Consensus 173 ~NPTGav~~~~~-l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~ 251 (393)
T COG0436 173 NNPTGAVYSKEE-LKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGP 251 (393)
T ss_pred CCCcCcCCCHHH-HHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecC
Confidence 777777666555 999999999999999999999999 6663 2222 2222 2344669999999 99999999988
Q ss_pred -HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH----HHHHHHHHHHHHHHHHHHhcC-CceEE-eecc
Q 017633 223 -RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE----YLNKITGELTQGIIDAGKKAG-HAICG-GYIS 295 (368)
Q Consensus 223 -~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~----~~~~~~~~l~~~l~~~~~~~~-~~~~~-~~~~ 295 (368)
+++++.+. ......+++++.++|.++.++++.-.+.++.+ .++++++.+.+.|.+ .+ +.... +..+
T Consensus 252 ~~~l~~~~~---~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~----~~g~~~~~~p~Ga 324 (393)
T COG0436 252 PEELIAALR---KLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE----IGGLSVVKPPEGA 324 (393)
T ss_pred hHHHHHHHH---HHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh----cCCeeeccCCCee
Confidence 77877776 23455666889999999999997332112333 345555555555544 33 33333 3345
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC---C----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ---F----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~---~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++|.++. ...++.+|+..|+++ ||.+.||. . .++|+++..++++++++++++++.+.+
T Consensus 325 ~Y~~~~i~-------------~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 325 FYLFPKIP-------------ELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAE 391 (393)
T ss_pred EEEEeecC-------------CCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 56666553 224568999998876 89999972 2 357889999999999999999998864
No 87
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-32 Score=225.00 Aligned_cols=344 Identities=19% Similarity=0.180 Sum_probs=273.5
Q ss_pred ceeccCCCcHHHHHHHHH-HHHc----CC--CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc-
Q 017633 3 QLIILFPSYLQVLAALGE-TMKK----GT--SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT- 73 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~-~~~~----~~--~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~- 73 (368)
+.+++|+++|.++.+..+ +... -. ....+.++.+.+.+.+....+ +.++|..-.+|+.|++.|++++..+.
T Consensus 86 sSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~ 165 (484)
T KOG1405|consen 86 SSVPLGYNNPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYR 165 (484)
T ss_pred cccccCCCCHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHH
Confidence 568999999999988753 2222 11 223456778888888888888 78899999999999999998876441
Q ss_pred -------------------------CCceEEEEcCCCCCCchhhhhhcCC-CccccCCCCCCCCCCCCCCcccccC----
Q 017633 74 -------------------------GRERIIKFEGCYHGHADPFLVKAGS-GVATLGLPDSPGVPKGATYETLTAP---- 123 (368)
Q Consensus 74 -------------------------~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---- 123 (368)
+.-.|+.|.++|||.+...+..+.. +++....|.+++.......-.+.++
T Consensus 166 ~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~ 245 (484)
T KOG1405|consen 166 AKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVA 245 (484)
T ss_pred hhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhh
Confidence 1234899999999999988888755 4566666766665432222222222
Q ss_pred CC------CHHHHHHHHHcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcc
Q 017633 124 FN------DVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 193 (368)
Q Consensus 124 ~~------d~~~le~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~ 193 (368)
.| .++++|++|.++. ..++++++||+++.+|.-..+++|++.+.++|+|||+.+|+||+|+|. .+|.+++
T Consensus 246 ~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~Wa 325 (484)
T KOG1405|consen 246 ENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWA 325 (484)
T ss_pred hhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceee
Confidence 12 4889999998753 468999999999999999999999999999999999999999999998 7889999
Q ss_pred ccccCCC--cchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHH
Q 017633 194 QEYFGVT--PDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKI 270 (368)
Q Consensus 194 ~~~~~~~--~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 270 (368)
.++|++. ||++||||-|- || | .-.+ .++...++.+.+||.+.|.-...+.+.++.+.++++.+.....
T Consensus 326 Hehw~l~~PpD~vTFSKK~q~gG----f-fh~~----~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~v 396 (484)
T KOG1405|consen 326 HEHWNLDSPPDVVTFSKKFQTGG----F-FHDE----EFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHV 396 (484)
T ss_pred ehhcCCCCCccceehhhhhhcCc----c-ccCc----ccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999985 79999999887 44 2 2232 3344445678899999999999988999999889999999999
Q ss_pred HHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--cccc
Q 017633 271 TGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSL 347 (368)
Q Consensus 271 ~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~ 347 (368)
.+.+..+|.++..+++ .....++.|.+..+++ |.+.....+...++-+|+.++.++...+ |+++
T Consensus 397 G~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~-------------ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsL 463 (484)
T KOG1405|consen 397 GKALLKGLLELQAKYPGKINNLRGRGTFIAWDC-------------PSGSIRDKLILIARLNGVNLGGCGDKSIRFRPSL 463 (484)
T ss_pred HHHHHHHHHHHHHhCchhhhcccccceEEEEeC-------------CChHHHHHHHHHHHHcCceecccccceeeeccce
Confidence 9999999999988876 4557888999999988 3455567889999999999999987665 4678
Q ss_pred CCCHHHHHHHHHHHHHHHhhC
Q 017633 348 AHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 348 ~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.-.+-+.+-++++++++++.+
T Consensus 464 vf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 464 VFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred eehhhhHHHHHHHHHHHhccC
Confidence 889999999999999998753
No 88
>PLN02822 serine palmitoyltransferase
Probab=99.98 E-value=2.2e-30 Score=240.85 Aligned_cols=322 Identities=19% Similarity=0.214 Sum_probs=230.3
Q ss_pred eeccCC-CcHHHHHHHHHHHHcC-C------CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFP-SYLQVLAALGETMKKG-T------SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~-~~~~v~~a~~~~~~~~-~------~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
.+++|. ++|++++++.+++++. . .++.+.+.+.+|+++++++++..+.+++++|++ ++..+++.. .++
T Consensus 117 ~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~-a~~sai~a~---~~~ 192 (481)
T PLN02822 117 ANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLS-TIFSVIPAF---CKK 192 (481)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHH-HHHHHHHHh---CCC
Confidence 345565 7999999999999882 2 134567889999999999999778899986555 777777644 344
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC------CC-eEEEEEcc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK------GE-IAAIILEP 148 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~------~~-~~~~~~~~ 148 (368)
.++|++++.+|......+.+.+. +++.++++|.++++..+.+.. ++ ++++++++
T Consensus 193 gd~Ii~d~~~H~s~~~~~~ls~~-------------------~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~ 253 (481)
T PLN02822 193 GDIIVADEGVHWGIQNGLYLSRS-------------------TIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEA 253 (481)
T ss_pred CCEEEEeCCccHHHHHHHHHcCC-------------------eEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence 45666788899776555544432 345566778888887776411 23 38999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc-h--hcccCccccccCC---Ccchh--hhhhhcc-CCccceee
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-F--RLAYGGAQEYFGV---TPDLT--TLGKIIG-GGLPVGAY 219 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~-~--~~g~~~~~~~~~~---~~di~--s~sK~~~-~G~~iG~v 219 (368)
+++++|.+.+ +++|+++|++||++||+||+|+. . +.|. +..+++++ .+|++ +|||+++ .| ||+
T Consensus 254 i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~-G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i 325 (481)
T PLN02822 254 IYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR-GLSEHFGVPIEKIDIITAAMGHALATEG---GFC 325 (481)
T ss_pred CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-ChHHHcCCCCCCCeEEEecchhhhhhCC---eEE
Confidence 9999999999 99999999999999999999962 2 2233 34566776 56765 5899998 33 788
Q ss_pred eehHHHHHHhcCCCCccccccCCCC--HHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 220 GGRRDIMEMVAPAGPMYQAGTLSGN--PLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
++++++++.++.. .++.+|+.+ +..++++.++++.++. +++.++++++++++++.|++.. ++.......++
T Consensus 326 ~g~~~ii~~~~~~---~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~sp 399 (481)
T PLN02822 326 TGSARVVDHQRLS---SSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSP 399 (481)
T ss_pred EcCHHHHHHHHhc---CCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCC
Confidence 9999999887742 244455544 7788888889987755 4577889999999988888741 33323335567
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC---------Cccc--cccCCCHHHHHHHHHHHHHH
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF---------EAGF--TSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~---------~~~~--~~~~~~~~~i~~~~~~l~~~ 364 (368)
++++.+.... ... ..+.....++++.|+ ++||.+.++.. +.+| ++..++++||++++++|+++
T Consensus 400 i~~l~l~~~~-~~~----~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 400 IVFLHLEKST-GSA----KEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred EEEEEeCCCc-ccc----cchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 7777774210 000 001123578999998 78999997532 1244 35678999999999999998
Q ss_pred Hhh
Q 017633 365 LRQ 367 (368)
Q Consensus 365 l~~ 367 (368)
+.+
T Consensus 475 ~~~ 477 (481)
T PLN02822 475 AAS 477 (481)
T ss_pred HHH
Confidence 865
No 89
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=6.2e-30 Score=217.74 Aligned_cols=324 Identities=15% Similarity=0.090 Sum_probs=222.3
Q ss_pred CcHHHHHHHHHHHHcC-CCCCCCC-hhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 10 SYLQVLAALGETMKKG-TSFGAPC-LLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~-~~~~~~~-~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
.+|+|++|+.+.++.+ .+|.+.+ +...++.++..+.++ .++.++++++...++..+++... .++|.|++..|.
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T--~~gd~Vvi~tPv 116 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT--KPGDGVVIQTPV 116 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC--cCCCeeEecCCC
Confidence 6899999999999875 3343333 367788888888776 58899999999999999998773 468899999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCC-eEEEEEcccCCCCCcccCCHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
|+... .+....+.++...++...+ ..+.+ |+++||+.+... + +..++|+|.|+ +|. ..++|+|
T Consensus 117 Y~PF~-~~i~~n~R~~i~~pL~~~~--------~~y~i---D~~~LE~~~~~~--~vkl~iLCnPHNP-~Gr-vwt~eeL 180 (388)
T COG1168 117 YPPFY-NAIKLNGRKVIENPLVEDD--------GRYEI---DFDALEKAFVDE--RVKLFILCNPHNP-TGR-VWTKEEL 180 (388)
T ss_pred chHHH-HHHhhcCcEEEeccccccC--------CcEEe---cHHHHHHHHhcC--CccEEEEeCCCCC-CCc-cccHHHH
Confidence 98752 3333344443322221111 01111 899999999853 4 44566666543 444 4555669
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcc-cCccccccC-----CCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFG-----VTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGP 234 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g-~~~~~~~~~-----~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~ 234 (368)
++|+++|.+||++||+||+|+++ ..| .++.+...+ ...-+.+-||+|+ +|+.+++++. ++++..++.. .
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~--~ 258 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLK--R 258 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHH--H
Confidence 99999999999999999999999 666 333332221 1112345689999 8999999855 6666444332 1
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
....+...+|.+++.|..++++..+. +++.+.++.+++++.+.+++.... .....+..+.+.|++++.-...
T Consensus 259 l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~--v~v~~p~gTYL~WLD~r~l~l~---- 332 (388)
T COG1168 259 LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPG--VKVTEPQGTYLAWLDCRELGLD---- 332 (388)
T ss_pred HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCC--cEEecCCCceeeeeeccccCCC----
Confidence 22234446789999999999986543 445666777777777777765322 3334455566889999764322
Q ss_pred hcccccHHHHHHHHHHHHc-CeeecCC------CCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 313 AKKSETTKFARFYRGMLEE-GVYFAPS------QFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..++.+.|+++ +|.+.+| |...+|+.+.++++.+++++++|++++..
T Consensus 333 --------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 333 --------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred --------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 25677777765 5555554 55677899999999999999999998864
No 90
>PRK07324 transaminase; Validated
Probab=99.97 E-value=5.7e-30 Score=232.60 Aligned_cols=319 Identities=14% Similarity=0.098 Sum_probs=211.7
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
++.+ +++.+++......+.+.....+|++.+++++. ++++|++|+|+++|+..++..+ ..++|.|++..++|...
T Consensus 41 ~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~ 117 (373)
T PRK07324 41 GKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYAL--VEPGDHVISVYPTYQQL 117 (373)
T ss_pred Ccch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHh--CCCCCEEEEcCCCchhH
Confidence 3456 77777776643333345667899999999875 5789999999999999998766 35678899988888665
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
.. .....|..+...+.....++. .|++++++.++ +++++++++..+|++|.+.++++ +++|++
T Consensus 118 ~~-~~~~~g~~v~~v~~~~~~~~~------------~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~~~~~-l~~i~~ 180 (373)
T PRK07324 118 YD-IPESLGAEVDYWQLKEENGWL------------PDLDELRRLVR---PNTKLICINNANNPTGALMDRAY-LEEIVE 180 (373)
T ss_pred HH-HHHHcCCEEEEEecccccCCC------------CCHHHHHHhCC---CCCcEEEEeCCCCCCCCCCCHHH-HHHHHH
Confidence 33 333334333222221111111 17899988776 46677777666666776665444 999999
Q ss_pred HHHHhCCEEEEehhhhch-hcccCc-cccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 169 ITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~-~~g~~~-~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|++||+++|+||+|.++ ..+... ..+..+....+.||||.++ +|+|+||+++++++++.+.. .....+++.+.
T Consensus 181 ~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~---~~~~~~~~~~~ 257 (373)
T PRK07324 181 IARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRK---YRDYTMICAGV 257 (373)
T ss_pred HHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHH---HhCcEEecCCh
Confidence 999999999999999887 433221 1122223344679999999 89999999999988888774 22334566788
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
+++.++..+++.. +.+.++.++..+..++.+.+.+...+ .....+..+.+.++.+.. ..+..++
T Consensus 258 ~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~-------------~~~~~~~ 322 (373)
T PRK07324 258 FDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDV-------------DMPSEDF 322 (373)
T ss_pred HHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCC-------------CCCHHHH
Confidence 8888877766521 23334444444444444444444443 222223333444555531 1235788
Q ss_pred HHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 325 YRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 325 ~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.|+ ++||.+.|+.. .++|+++..+++.+.+++++|++++.+
T Consensus 323 ~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 323 CLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred HHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 88876 67999999853 356778888899999999999999865
No 91
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=2.1e-29 Score=231.57 Aligned_cols=321 Identities=17% Similarity=0.109 Sum_probs=209.3
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+++++.+.+......|.+.....+|++.+++++ + +++ ++++|+|+++|+..++... ..++|.|++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l--~~~gd~Vlv~~ 146 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGL--INPGDEVILFA 146 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHh--CCCCCEEEEeC
Confidence 556888888887753223334445566777776654 2 344 6999999999999988755 35788999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
+.|..+... +...|.++....+.....-. |++++++.+. ++++++++++.+|++|.+++ .+.
T Consensus 147 P~y~~~~~~-~~~~g~~~~~v~~~~~~~~~-------------~~~~l~~~~~---~~~k~i~i~~p~NPtG~~~s-~~~ 208 (413)
T PLN00175 147 PFYDSYEAT-LSMAGAKIKTVTLRPPDFAV-------------PEDELKAAFT---SKTRAILINTPHNPTGKMFT-REE 208 (413)
T ss_pred CCchhHHHH-HHHcCCEEEEEECCcccCCC-------------CHHHHHHhcC---cCceEEEecCCCCCCCcCCC-HHH
Confidence 888765433 33334433222221111111 7899999886 35677777666666776665 555
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCcccc-cc---CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE-YF---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~-~~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
+++|+++|++||+++|+||+|.++ ..+...... .. +....+.||||.++ +|+|+||+++++++++.+.. ..
T Consensus 209 l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~---~~ 285 (413)
T PLN00175 209 LELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ---AH 285 (413)
T ss_pred HHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHH---HH
Confidence 999999999999999999999887 433221111 11 22334569999999 89999999999999888763 22
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
...+++.+.+.+.++.++++.. +.+.++.++..+..++.+.+.+.+.+.....+..+.++|+.+...
T Consensus 286 ~~~~~~~s~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~----------- 352 (413)
T PLN00175 286 SFLTFATATPMQWAAVAALRAP--ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPF----------- 352 (413)
T ss_pred hhccCCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccc-----------
Confidence 3345678888888887777521 223333333333333334444333443333334455677765210
Q ss_pred ccHHHHHHHHHHH-HcCeeecCCC---------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~-~~Gi~~~~~~---------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+ ++||.+.|+. ..++|+++..+++++++++++|++.+++
T Consensus 353 ~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 353 GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence 1112478888887 5699999863 1245777778999999999999998763
No 92
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=1.7e-29 Score=230.60 Aligned_cols=320 Identities=13% Similarity=0.046 Sum_probs=204.0
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+++++.+.+......+.+.....++++++++++ + .+ +++++|+|+++|+..+++.+ ..+++.|++.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l--~~~gd~vl~~~ 112 (378)
T PRK07682 35 PWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAI--INPGDEVLIVE 112 (378)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh--CCCCCEEEEeC
Confidence 335688888777643222333445566666666655 2 23 47999999999999998766 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|+.....+.. .+...........+.. . -|++++++++.. +++++++...+|++|.+++ .+.
T Consensus 113 p~y~~~~~~~~~-~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~---~~~~v~~~~p~NPtG~~~s-~~~ 175 (378)
T PRK07682 113 PSFVSYAPLVTL-AGGVPVPVATTLENEF---------K---VQPAQIEAAITA---KTKAILLCSPNNPTGAVLN-KSE 175 (378)
T ss_pred CCchhhHHHHHH-cCCEEEEeecCCccCC---------C---CCHHHHHhhcCc---ccEEEEEECCCCCcCcCcC-HHH
Confidence 999865433333 3333221111100000 0 178999988863 4565544444555666554 555
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccc-c---CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY-F---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~-~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
+++|+++|++|++++|+||+|.++ +.+....... . .....+.||||.++ +|+|+||+++++++++.+... .
T Consensus 176 ~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~---~ 252 (378)
T PRK07682 176 LEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKI---H 252 (378)
T ss_pred HHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHH---H
Confidence 999999999999999999999888 5433211111 1 12233679999999 899999999999998887632 2
Q ss_pred ccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
....++.+.+++.++.++++.... +..++.++++++.+.+.|++ .+.....+..+.++|..+..
T Consensus 253 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~g~~~~~~~~~~---------- 318 (378)
T PRK07682 253 QYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE----IGLTCHVPGGAFYAFPSISS---------- 318 (378)
T ss_pred HhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----CCCccCCCCeeEEEEEeccC----------
Confidence 234456788888888777752111 11233344455555555544 44332233344555655421
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++++.|+ ++||.+.++. ..++|+++..+++++++++++|+++++++
T Consensus 319 --~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 319 --TGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --CCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1123477888876 6799999863 23467777888999999999999998764
No 93
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.97 E-value=6e-29 Score=225.01 Aligned_cols=318 Identities=17% Similarity=0.149 Sum_probs=233.6
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcC-C------CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH--
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKG-T------SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA-- 71 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~-~------~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~-- 71 (368)
.++++||. .+|+++++..+++++. . ........+.+|.+.++++++. +..++.+||..|+..++.....
T Consensus 108 sSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~AN~~~i~aL~~~~ 186 (476)
T PLN02955 108 SGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFAANMAAMVAIGSVA 186 (476)
T ss_pred eccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHHHHHHHHHHHhhcc
Confidence 46788888 8999999999998883 1 1233457888999999999954 4566667899999999965420
Q ss_pred ---------hcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeE
Q 017633 72 ---------FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 142 (368)
Q Consensus 72 ---------~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~ 142 (368)
..+++.+|+.+...|.+..-.+.+... ..+.+++.+++||+++|++++++..++.+
T Consensus 187 ~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~---------------~~~a~~~~f~HND~~~Le~~L~~~~~~~~ 251 (476)
T PLN02955 187 SLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAER---------------QGNVEVFVYRHCDMYHLNSLLSSCKMKRK 251 (476)
T ss_pred ccccccccccCCCCcEEEEeccchHHHHHHHHhccc---------------cCCceEEEeCCCCHHHHHHHHHhCCCCce
Confidence 023455777788888876555544321 00234566788899999999987656678
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc--cCccccccCCCcch----hhhhhhccCCccc
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA--YGGAQEYFGVTPDL----TTLGKIIGGGLPV 216 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g--~~~~~~~~~~~~di----~s~sK~~~~G~~i 216 (368)
+++++++++|.|.+.+ +++|.++|++||++||+||+|+.+..| ..+...++++.+|+ .||||++|. +.
T Consensus 252 ~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~--~G 325 (476)
T PLN02955 252 VVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC--HG 325 (476)
T ss_pred EEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc--cC
Confidence 9999999999999999 999999999999999999999644222 24556677776654 689999973 45
Q ss_pred eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 217 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 217 G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
|++++++++++.++..+..+.++| +.++..+++++++++.+.++ ..++++.++.+++++. .+... ..
T Consensus 326 Gfi~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-------~G~~~----~s 393 (476)
T PLN02955 326 GFIACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-------SGVDI----SS 393 (476)
T ss_pred ceeecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-------cCCCC----CC
Confidence 678889989898886555555555 55667777788888887543 3456677777777653 13221 24
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-------cc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-------~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+++.+.+. ++....++++.|+++||++.+...|. +| ++..++++||+++++.|.++.+
T Consensus 394 PI~pI~ig-------------~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 394 PIISLVVG-------------NQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred CEEEEEeC-------------CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHh
Confidence 55555552 45667889999999999998876553 23 4678899999999999998764
No 94
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=218.23 Aligned_cols=329 Identities=18% Similarity=0.160 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHcC-CCCC----CCChhHHHHHHHHHhhCC----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 13 QVLAALGETMKKG-TSFG----APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 13 ~v~~a~~~~~~~~-~~~~----~~~~~~~~l~~~l~~~~~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
-+.+++++.+... .+.| .-+++...|++.+++.++ ..++|++|.|+.+++..++... ..++|.||++++
T Consensus 48 fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l--~~~GDeVii~eP 125 (420)
T KOG0257|consen 48 FVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGL--LNPGDEVIVFEP 125 (420)
T ss_pred HHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHH--cCCCCEEEEecC
Confidence 5888888877763 2212 234667777777777665 3678999999999999888655 368999999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
.|..+.......++.++.+..-+.+ +. +..-++ .|.+++|.+++ ++++++++++.+|++|.+.+.++
T Consensus 126 ~fd~Y~~~~~maG~tpv~v~~~~~~-------g~-~~s~~~~~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsRee- 193 (420)
T KOG0257|consen 126 FFDCYIPQVVMAGGTPVFVPLKPKE-------GN-VSSSDWTLDPEELESKIT---EKTKAIILNTPHNPTGKVFSREE- 193 (420)
T ss_pred cchhhhhHHhhcCCcceeecccccc-------cc-ccCccccCChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHH-
Confidence 9998877777777776543322111 11 111111 28999999999 57888888888888887776655
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hccc---Cccc--cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQ--EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~---~~~~--~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
|++|+++|++||+++|.||+|..+ ..+. .++. ..+.+...+.|+||+|+ .|||+||+++++++...... .
T Consensus 194 Le~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~---v 270 (420)
T KOG0257|consen 194 LERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFP---V 270 (420)
T ss_pred HHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHH---H
Confidence 999999999999999999999777 5553 1222 23445566789999999 89999999999888887773 3
Q ss_pred cccccCCCCHHHHHHHHHHHHHHc---c-C------CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLK---E-P------GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~---~-~------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
.+...+..++..+.|..+++..-. + + ++.+.++++++.+.+.|.+ .++....+..+.++|.++...
T Consensus 271 h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~----lg~~v~~p~gayyl~adfs~~ 346 (420)
T KOG0257|consen 271 HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE----LGLKVTGPEGAYYLWADFSLA 346 (420)
T ss_pred hhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCceEEEEecccc
Confidence 344555666666666666654322 1 1 1445566666666666655 455555666677888887622
Q ss_pred CCcccchhcccccHHHHHHHHHHHHc-CeeecCCCCCc-----------cccccCCCHHHHHHHHHHHHH
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEA-----------GFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~l~~ 363 (368)
..-++..... +..+.-.++.+|.++ |+.+-|..... .++.++-+++.++.+.++|++
T Consensus 347 ~~~~~~~~~~-~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 347 KSWPFFEEIL-EKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred ccCCcchhhc-cCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 1111110000 111235677888754 77777753221 234556678888888888873
No 95
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=1e-28 Score=227.22 Aligned_cols=319 Identities=21% Similarity=0.197 Sum_probs=223.0
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcCCC-------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.+++++|. .+|++++++.+++++... .+...+...+|++.++++++. +..++++||++|++.+++++....
T Consensus 51 ~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~~l~~~sG~~an~~ai~~l~~~~ 129 (402)
T TIGR01821 51 CSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ESALVFTSGYVANDATLATLAKII 129 (402)
T ss_pred EccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-CeEEEECchHHHHHHHHHHhhCCC
Confidence 36778888 788999999999987321 123467789999999999974 456777789999999998774332
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGN 152 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~ 152 (368)
++.+++.+..+|+.....+...+.+ ...++++|+++++++++... ++++++++++++++
T Consensus 130 -~~~~v~~~~~~h~s~~~~~~~~g~~-------------------~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~ 189 (402)
T TIGR01821 130 -PGCVIFSDELNHASMIEGIRHSGAE-------------------KFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSM 189 (402)
T ss_pred -CCCEEEEcchHhHHHHHHHHHcCCe-------------------EEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCC
Confidence 3456666777887655444433321 12234458899999887532 36789999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCC--Ccchh--hhhhhccCCccceeeeehHHH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~~ 225 (368)
+|.+.+ +++|.++|++||++||+||+|+ |+ ..|. +.....++ .+|++ ||||+++. ..||+++++++
T Consensus 190 ~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~--~GG~i~~~~~~ 262 (402)
T TIGR01821 190 DGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGG-GIAERDGLMHRIDIIEGTLAKAFGV--VGGYIAASRKL 262 (402)
T ss_pred CCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCC-ccchhccCCCCCeEEEEechhhhcc--CCceeecCHHH
Confidence 999988 9999999999999999999996 44 2222 22334443 35665 99999983 12788889888
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
++.+......+ ..+.+.++.+++++.++++.+.+.+ +.++..++++++++.|++. ++. ...+.++++.+.+.
T Consensus 263 ~~~l~~~~~~~-~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~i~~i~~~- 335 (402)
T TIGR01821 263 IDAIRSYAPGF-IFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL----GIP-VIPNPSHIVPVIIG- 335 (402)
T ss_pred HHHHHHhCcCc-eecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc----CCC-cCCCCCCEEEEEeC-
Confidence 88876432221 2344678889999999999876542 3445566777777777653 322 12234566555441
Q ss_pred CCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC-------Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
....+.++++.|++ +||.+.+... ..+| ++..++++|+++++++|++++++
T Consensus 336 ------------~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 336 ------------DAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred ------------CHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 22345788999875 5999987422 2333 46789999999999999998865
No 96
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3e-29 Score=230.39 Aligned_cols=318 Identities=12% Similarity=0.052 Sum_probs=209.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+++++.+.+.....++++.....+|++.+++++ + ++ ++|++|+|+++++..++.++ ..++|.|++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~--~~~Gd~Vlv~ 123 (399)
T PRK07681 46 PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVY--ANPGDIILVP 123 (399)
T ss_pred CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHh--CCCCCEEEEC
Confidence 3556888888776554445444455666777777665 2 45 78999999999999988766 3467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|.+....+. ..|..+...+.....++. .|++++++.+. +++++++++..+|++|.+++.++
T Consensus 124 ~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~ 187 (399)
T PRK07681 124 DPGYTAYETGIQ-MAGATSYYMPLKKENDFL------------PDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDF 187 (399)
T ss_pred CCCccchHHHHH-hcCCEEEEEecCCCCCCc------------CCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHH
Confidence 999987654443 334433222221111111 17888988875 35666666633555666665444
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|+++|++||+++|+||+|.++ ..+.. ..... .+....+.||||.++ +|+|+||+++++++++.+..
T Consensus 188 -~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~--- 263 (399)
T PRK07681 188 -FKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQ--- 263 (399)
T ss_pred -HHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHH---
Confidence 999999999999999999999888 43321 11111 122334669999998 89999999999999888763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
......++.+.+++.++.++++.. +.+.++.++..+..++.+.+.+.+.+.....+..+.++|+.+.
T Consensus 264 ~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~----------- 330 (399)
T PRK07681 264 FKSNTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIP----------- 330 (399)
T ss_pred HHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECC-----------
Confidence 222345577888888877777521 2343443433344444444444444543223445777787763
Q ss_pred ccccHHHHHHHHHHHH-cCeeecCCC------CCccccccCCCHHHHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
...+..++++.|++ +||.+.++. ..++|+++..+++++++++++|+++
T Consensus 331 --~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 331 --KGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRNS 385 (399)
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 22235788888887 899999873 2346777777889999999999873
No 97
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.97 E-value=1.1e-28 Score=218.49 Aligned_cols=315 Identities=23% Similarity=0.263 Sum_probs=238.1
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcC-CC------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~-~~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.++++||. .+|++++++.+.+++. .. .....+.+.+|.+.++++++..+.++|+ ||-.|+..++... .
T Consensus 45 ~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~-SGy~AN~~~i~~l---~ 120 (388)
T COG0156 45 CSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFS-SGFVANLGLLSAL---L 120 (388)
T ss_pred eccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEc-ccchhHHHHHHHh---c
Confidence 46788998 8999999999999882 11 2345689999999999999755555555 7999999999766 3
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCC---CeEEEEEcccC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG---EIAAIILEPVV 150 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~---~~~~~~~~~~~ 150 (368)
+++.+|+.+.-.|.+..-.+.++ +.+++.+.++|+++||+.+++... +.+.|+++.++
T Consensus 121 ~~~dli~~D~lnHASiidG~rls-------------------~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVf 181 (388)
T COG0156 121 KKGDLIFSDELNHASIIDGIRLS-------------------RAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVF 181 (388)
T ss_pred CCCcEEEEechhhhhHHHHHHhC-------------------CCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccc
Confidence 45678888888888765544443 345666777899999999986211 47899999999
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCc---c--hhhhhhhccCCccceeeeehH
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTP---D--LTTLGKIIGGGLPVGAYGGRR 223 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~---d--i~s~sK~~~~G~~iG~v~~~~ 223 (368)
+|.|.+.| +++|++++++|+.+|++||+| .|+ .....+..+++|+.+ | +.||||+||+ -.|++.+++
T Consensus 182 SMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs--~Gg~v~g~~ 255 (388)
T COG0156 182 SMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS--SGGYIAGSA 255 (388)
T ss_pred cCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc--cCceeeCcH
Confidence 99999999 999999999999999999999 666 322234556667653 3 3589999993 245788899
Q ss_pred HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 224 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 224 ~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
.+++.+....+.+.++| +.+|..++++.++++.+.+ .+.++++.++..++++.++.. ++. ..+...+++.+.+
T Consensus 256 ~~~d~L~~~ar~~ifSt-alpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~----~~~-~~~s~s~I~pv~~ 329 (388)
T COG0156 256 ALIDYLRNRARPFIFST-ALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL----GLV-LLPSESPIIPVIL 329 (388)
T ss_pred HHHHHHHHhCCceeccC-CCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCc-cCCCCCCeeeeEe
Confidence 99999987665555454 6788888899999998875 456777888888887444442 222 1334455666665
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc---------ccccCCCHHHHHHHHHHHHHH
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG---------FTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~---------~~~~~~~~~~i~~~~~~l~~~ 364 (368)
. ++....+++..|+++||++.+...|.+ +++..++++||+++++.|.++
T Consensus 330 g-------------d~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 330 G-------------DEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred C-------------CHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 3 556678999999999999998765543 357788999999999998865
No 98
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-28 Score=225.01 Aligned_cols=323 Identities=16% Similarity=0.113 Sum_probs=216.8
Q ss_pred CCcHHHHHHHHHHHHcCCC-CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 9 PSYLQVLAALGETMKKGTS-FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
+.+|.+++++.+++..... .+.+.....+++++++++++ +++++++++|+++++..++..+. .+++.|++.+++|+
T Consensus 41 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~--~~gd~vl~~~p~y~ 118 (380)
T PRK06225 41 GPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFL--SPGDNAVTPDPGYL 118 (380)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCc
Confidence 3678899999998875322 23344567899999999998 67899999999999999997652 45678999888887
Q ss_pred CCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 87 GHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
... ..+...|..+...... ...+. .-|++++++.++ ++++++++...++++|.+++ .+.+++
T Consensus 119 ~~~-~~~~~~g~~~~~v~~~~~~~~~------------~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~-~~~~~~ 181 (380)
T PRK06225 119 IID-NFASRFGAEVIEVPIYSEECNY------------KLTPELVKENMD---ENTRLIYLIDPLNPLGSSYT-EEEIKE 181 (380)
T ss_pred chH-HHHHHhCceEEeeccccccCCc------------cCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCC-HHHHHH
Confidence 543 3333344433221111 00010 017899998886 35666554444445666554 445999
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccCcccc-ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYGGAQE-YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~~~~~-~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
|+++|++||+++|+||+|.+|..+...... ......++.||||.++ +|+|+||+++++++++.+... ...+++.
T Consensus 182 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~----~~~~~~~ 257 (380)
T PRK06225 182 FAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSI----VINDLGT 257 (380)
T ss_pred HHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHH----HhcccCC
Confidence 999999999999999999877222211111 1123345679999998 799999999999988887631 2245677
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CC-ceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
+.+++.++.++++.. +.+.+++++..+..++.+.+.+.+. +. ....+..+.++|+.+... ..+.
T Consensus 258 ~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~ 323 (380)
T PRK06225 258 NVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA------------GIDP 323 (380)
T ss_pred CHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc------------cCCH
Confidence 888888877776532 3455555555555555555555443 22 112344566777776321 1235
Q ss_pred HHHHHHHHHcCeeecCCC-------CCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 322 ARFYRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~-------~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.++++.|.++||.+.++. ...+|+++..+++++++++++|+++++++
T Consensus 324 ~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 324 EDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred HHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 789999999999998862 22467777788999999999999998653
No 99
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.3e-28 Score=226.56 Aligned_cols=319 Identities=19% Similarity=0.177 Sum_probs=225.8
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcCCC-------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.++++||. .+|+|++++.+++++... .....+.+.+|+++++++++. +.+++++||++|++.++++.....
T Consensus 51 ~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~SG~~An~~ai~~l~~~~ 129 (406)
T PRK13393 51 CSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-EAALLFTSGYVSNWAALSTLGSRL 129 (406)
T ss_pred ecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-CcEEEeCCcHHHHHHHHHHhhcCC
Confidence 36779999 899999999999987421 112345789999999999975 567777789999999998542221
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGN 152 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~ 152 (368)
++.+|+.+..+|++........+. ++..++++|++++++.++.. +++++++++++++++
T Consensus 130 -~g~~I~~~~~~H~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~ 189 (406)
T PRK13393 130 -PGCVILSDELNHASMIEGIRHSRA-------------------EKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSM 189 (406)
T ss_pred -CCCEEEEccchhHHHHHHHHHcCC-------------------eEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCC
Confidence 235778888899876655543322 22344556889999888753 236789999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCCC--cchh--hhhhhccCCccceeeeehHHH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT--PDLT--TLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~~--~di~--s~sK~~~~G~~iG~v~~~~~~ 225 (368)
+|.+.+ +++|.++|++||+++|+||+|+ |+ +.|..+ ....++. +|++ ||||+++. ..||+++++++
T Consensus 190 ~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~--~GG~~~~~~~~ 262 (406)
T PRK13393 190 DGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV--MGGYITGSAAL 262 (406)
T ss_pred CCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc--cCceeeCCHHH
Confidence 999999 9999999999999999999995 55 333322 3444543 4655 99999983 12788888888
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
++.+...... ...+.+.++.+++++.++++.+.+.. ...++.++.+++++.|++. +.. .+.+.++++.+.+.
T Consensus 263 ~~~l~~~~~~-~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~i~~v~~~- 335 (406)
T PRK13393 263 CDFIRSFASG-FIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA----GIP-HLPNPSHIVPVMVG- 335 (406)
T ss_pred HHHHHHhCcC-ceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc----CCC-cCCCCCCeEEEEeC-
Confidence 8877643221 11355678888999999998775432 2345567777777777663 222 22345666665431
Q ss_pred CCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC-------Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++....++++.|++ +||.+.+... ..+| +++.++++|+++++++|++++.+
T Consensus 336 ------------~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 336 ------------DPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred ------------CHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 22345789999987 5999976421 2344 47788999999999999998764
No 100
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.5e-28 Score=226.62 Aligned_cols=318 Identities=21% Similarity=0.212 Sum_probs=221.9
Q ss_pred ceeccCCC-cHHHHHHHHHHHHcCCC-------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFPS-YLQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~~-~~~v~~a~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+++++|++ +|++++++.+++++... .+.+.+...+|++.++++++. +..++.+||++|+..++.++....+
T Consensus 53 s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG~~an~~ai~~l~~~~~ 131 (407)
T PRK09064 53 SNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSGYVSNDATLSTLAKLIP 131 (407)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcHHHHHHHHHHHHhCCCC
Confidence 67789995 99999999998887421 123577899999999999874 4556666799999999987644323
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNS 153 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~ 153 (368)
+.+++.+..+|++....+...+. +...++++|++++++.+++.. +++++++++++++++
T Consensus 132 -~~~i~~~~~~h~s~~~~~~~~~~-------------------~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~ 191 (407)
T PRK09064 132 -DCVIFSDELNHASMIEGIRRSRC-------------------EKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMD 191 (407)
T ss_pred -CCEEEEeCcchHHHHHHHHHcCC-------------------cEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCC
Confidence 45566565556654333332221 123344558999999987532 467899999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCC--Ccchh--hhhhhccCCccceeeeehHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
|.+.+ +++|.++|++||++||+||+|+ |+ ..|..+ ....++ .+|++ ||||+++. ..||++++++++
T Consensus 192 G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~--~GG~~~~~~~~~ 264 (407)
T PRK09064 192 GDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV--MGGYIAGSAALV 264 (407)
T ss_pred ccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--cCceEecCHHHH
Confidence 99888 9999999999999999999996 54 333332 334444 35665 99999982 127888898888
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
+.+......+ ..+.+.++.+++++.++++.+.+.+ ..+++.++++++++.|++. ++. .....++++.+.+.
T Consensus 265 ~~l~~~~~~~-~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~iv~i~~~-- 336 (407)
T PRK09064 265 DAVRSYAPGF-IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA----GIP-VMPNESHIVPVMVG-- 336 (407)
T ss_pred HHHHHhCccc-cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCC-CCCCCCCEEEEEeC--
Confidence 8776432221 2344678888899999999886543 3466777888888877764 322 12233556555542
Q ss_pred CCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC-------Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......++++.|++ +||.+.+... ..+| +++.++++|++++++.|++++.+
T Consensus 337 -----------~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 337 -----------DPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred -----------CHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 22345789999875 5999986422 2234 46778999999999999998765
No 101
>PLN02187 rooty/superroot1
Probab=99.97 E-value=1.2e-28 Score=228.87 Aligned_cols=336 Identities=13% Similarity=0.070 Sum_probs=208.3
Q ss_pred ceeccCCCcH----------HHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHH
Q 017633 3 QLIILFPSYL----------QVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMG 64 (368)
Q Consensus 3 ~~~~~g~~~~----------~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~ 64 (368)
.+++|++++| ++.+++.+.+.....+ +.+.....++++++++++ + ++++|++|+|+++++..
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~ 146 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHH
Confidence 4677787754 4788888877654333 335556677888887765 2 57899999999999999
Q ss_pred HHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEE
Q 017633 65 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 144 (368)
Q Consensus 65 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~ 144 (368)
++..+. .++|.|++.+++|..+... ....|.++........+.+. -|+++++++++. ....++
T Consensus 147 ~~~~l~--~pGd~Vlv~~P~y~~y~~~-~~~~g~~~~~~~l~~~~~~~------------~d~~~l~~~~~~--~~~~v~ 209 (462)
T PLN02187 147 VFESLA--RPNANILLPRPGFPHYDAR-AAYSGLEVRKFDLLPEKEWE------------IDLEGIEAIADE--NTVAMV 209 (462)
T ss_pred HHHHhc--CCCCEEEEeCCCCccHHHH-HHHcCCEEEEEeCccccCCc------------cCHHHHHHhcCC--CcEEEE
Confidence 998663 5778999999999876433 33344433322221111110 079999988863 244566
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCc-ccccc-CC--Ccchhhhhhhcc-CCcccee
Q 017633 145 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF-GV--TPDLTTLGKIIG-GGLPVGA 218 (368)
Q Consensus 145 ~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~~~-~~--~~di~s~sK~~~-~G~~iG~ 218 (368)
+++|+ |++|.+++ .+.+++|+++|++||+++|+||+|.++ +.+..+ ....+ +. ...+.||||.|+ +|||+||
T Consensus 210 i~nP~-NPTG~v~s-~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~ 287 (462)
T PLN02187 210 VINPN-NPCGNVYS-HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGW 287 (462)
T ss_pred EeCCC-CCCCCccC-HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEE
Confidence 66664 55666555 445999999999999999999999987 444321 22111 11 233468999988 8999999
Q ss_pred eeeh-H-HH---HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce--EE
Q 017633 219 YGGR-R-DI---MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI--CG 291 (368)
Q Consensus 219 v~~~-~-~~---~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~ 291 (368)
++++ + .+ ++.+...... ...+.+++.+.+.++.++++.- .+.+.++.++..+.-++.+.+.+...+... ..
T Consensus 288 ~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~s~~~Q~a~~~~L~~~-~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~ 365 (462)
T PLN02187 288 IALNDPEGVFETTKVLQSIKQN-LDVTPDPATIIQAALPAILEKA-DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKK 365 (462)
T ss_pred EEecCchhHHHHHHHHHHHHHh-ccccCCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCC
Confidence 9873 3 22 2333311111 1122245788888888777521 123444433333333444444444443221 12
Q ss_pred eeccceEEEEeecCCCcccchhcccccHHHHHHH-HHHHHcCeeecCCC----CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 292 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+..+.++|+.+..... ....+..+++ ..+.++||.+.|+. ..++|+++..+++++++++++|.++++
T Consensus 366 P~gg~fl~~~l~~~~~--------~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 366 PESCTYLLTKLELSLM--------DNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred CCEeEEEEeecChhhC--------CCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3446777776632110 0001234555 44578899999974 235678888899999999999999885
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 438 ~ 438 (462)
T PLN02187 438 R 438 (462)
T ss_pred H
Confidence 4
No 102
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2e-28 Score=224.52 Aligned_cols=328 Identities=13% Similarity=0.056 Sum_probs=205.2
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C----CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P----SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+++++.+.+......+|+.....+|++++++++ + +++ +|++|+|+++++..++.+. ..+++.|++
T Consensus 58 ~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~--~~~gd~Vlv 135 (410)
T PRK06290 58 ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCF--INPGDVTLM 135 (410)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHh--CCCCCEEEE
Confidence 4566888887766543233345566778888888774 2 234 7999999999999888766 356789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|......+ ...|.++...+.....++. .|++++++.+. +++++++++..+|++|.+++.
T Consensus 136 ~~P~y~~~~~~~-~~~g~~v~~v~~~~~~~~~------------~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~- 198 (410)
T PRK06290 136 TVPGYPVTGTHT-KYYGGEVYNLPLLEENNFL------------PDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATK- 198 (410)
T ss_pred eCCCCccHHHHH-HHcCCEEEEEecCCCcCCc------------CCHHHHHHhhc---ccceEEEEECCCCCCCcCCCH-
Confidence 999998764433 3334433222221111111 17888888876 356666666445556666654
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+.+++|+++|++||++||+||+|.++ ..+....+.. .+....+.||||.++ +|+|+||+++++++++.+....
T Consensus 199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~- 277 (410)
T PRK06290 199 EFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVK- 277 (410)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHH-
Confidence 44999999999999999999999887 4332211111 122234569999997 8999999999999888776322
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....+.+.+++.++..+++ +.++.++.++..+..++.+.+.+.+.+.....+..+.++|+.+........
T Consensus 278 --~~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~---- 348 (410)
T PRK06290 278 --DNNDSGQFIAIQKAGIYALD---HPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGI---- 348 (410)
T ss_pred --hccccCCcHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCC----
Confidence 22333445677777666664 334444444444444444444444444332223345566666532110000
Q ss_pred ccccHHHHHHHHHHHHcC-eeecCCCCC--ccccccC---CCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGMLEEG-VYFAPSQFE--AGFTSLA---HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~G-i~~~~~~~~--~~~~~~~---~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++++.|+++| +.+.|+... ++|+.++ .++++.++++++|++.|.++
T Consensus 349 --~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 349 --KFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred --CCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 0013578999999885 555565432 4566554 48899999999999998764
No 103
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.4e-28 Score=223.25 Aligned_cols=325 Identities=9% Similarity=0.077 Sum_probs=204.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC-Ch----hHHHHHHHHHhhCC---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAP-CL----LENVLAEMVISAVP---SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~-~~----~~~~l~~~l~~~~~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+.+++.+.+......+|+ .. +.+.+++++++.++ .+ +++++|+|+++++..++..+ ..++|.|++
T Consensus 54 p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l--~~~Gd~Vlv 131 (405)
T PRK06207 54 PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT--VARGDKVAI 131 (405)
T ss_pred CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh--cCCCCEEEE
Confidence 4467888888877653222222 23 34444444555444 34 78999999999999998766 356889999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|++....+ ...|.++.......... .+-.. -|+++++++++. +++++++...+|++|.+++.+
T Consensus 132 ~~P~y~~~~~~~-~~~g~~v~~v~~~~~~~------~~~~~---~d~~~l~~~~~~---~~k~v~l~~P~NPTG~~~s~e 198 (405)
T PRK06207 132 VQPDYFANRKLV-EFFEGEMVPVQLDYLSA------DKRAG---LDLDQLEEAFKA---GVRVFLFSNPNNPAGVVYSAE 198 (405)
T ss_pred eCCCchhHHHHH-HHcCCEEEEEeccccCc------ccCCC---cCHHHHHHhhhh---cCeEEEECCCCCCCCcCCCHH
Confidence 999998764333 33344332211110000 00000 179999998873 455554444455667666655
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCc-ccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+ +++|+++|++||+++|+||+|.++ ..+... ....+ +....+.||||.++ +|+|+||+++++++++.+....
T Consensus 199 ~-l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~ 277 (405)
T PRK06207 199 E-IAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQ 277 (405)
T ss_pred H-HHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHH
Confidence 4 999999999999999999999987 444321 11111 12234568999999 9999999999999888876322
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccch
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
.....+.+.+.+.++..+++. ..++.++..+.....++.+.+.+.+. +.....+..+.++|+.+...
T Consensus 278 ---~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~------- 345 (405)
T PRK06207 278 ---AIVSLRAAGYSQAVLRTWFSE--PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRL------- 345 (405)
T ss_pred ---hHhccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCccc-------
Confidence 223344566777777666641 11233333333333344454444444 33222344567888876310
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|+ ++||.+.|+.. .++|+++..+++++++++++|++++++
T Consensus 346 -----~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 346 -----AVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIER 402 (405)
T ss_pred -----CCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 123467889887 67999999742 346777778899999999999998865
No 104
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.6e-28 Score=218.32 Aligned_cols=315 Identities=17% Similarity=0.138 Sum_probs=218.7
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
|++| .+|.+++++.+.++.. +.||+....++++.++++++ ..+.|++++|+++.++..++++. .++|.|++..
T Consensus 32 nP~g-p~~~~~~~~~~~~~~~--~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~--~~gd~vl~~~ 106 (356)
T COG0079 32 NPYG-PPPKVIEAIRAALDKL--NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFV--EPGDTVLIPE 106 (356)
T ss_pred CCCC-CCHHHHHHHHHHHHhh--ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhh--cCCCEEEEcC
Confidence 5666 5588999998887753 34566688999999999997 46899999999999999888774 3568999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|.-+...+... |.++...+... +. .|++.+.+.+.. +++++++...||++|...+.++
T Consensus 107 Ptf~~Y~~~a~~~-g~~~~~v~~~~---~~------------~d~~~~~~~~~~---~~~lv~i~nPNNPTG~~~~~~~- 166 (356)
T COG0079 107 PTFSMYEIAAQLA-GAEVVKVPLKE---FR------------LDLDAILAAIRD---KTKLVFLCNPNNPTGTLLPREE- 166 (356)
T ss_pred CChHHHHHHHHhc-CCeEEEecccc---cc------------cCHHHHHHhhhc---CCCEEEEeCCCCCCCCCCCHHH-
Confidence 9987664443333 32222211111 11 178888888873 4554444444445666666554
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t 240 (368)
++++.+.+.+ +.+||+||+|.+| ...........+...-+-||||+|| +|+|+||+++++++++.+...+ ..
T Consensus 167 l~~l~~~~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr-----~p 240 (356)
T COG0079 167 LRALLEALPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVR-----PP 240 (356)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhc-----CC
Confidence 8888888877 9999999999998 4111110111111122459999999 9999999999999999998543 77
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
|+.|.++++++.++++ +.++.+...++...-|++|.+.+...++....++.++|+.+.+. +..
T Consensus 241 ~~v~~~a~~aa~aal~---~~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~-------------~~~- 303 (356)
T COG0079 241 FNVSSPALAAAIAALR---DADYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVP-------------DAE- 303 (356)
T ss_pred CCCCHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEECC-------------Ccc-
Confidence 8889999999988876 33556666666666667777766666633245555788787762 222
Q ss_pred HHHHHHHHHHcCeeecCCCC-C--cccccc-CCCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLEEGVYFAPSQF-E--AGFTSL-AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~-~--~~~~~~-~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+.+.|.++||.++.... + ..+++. .-++++.++++++|++++..
T Consensus 304 ~~~l~~~L~~~giivR~~~~~~~~~~~lRitvgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 304 AAALAEALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 46899999999999999854 1 113332 34778889999999988753
No 105
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.97 E-value=2.5e-28 Score=226.45 Aligned_cols=313 Identities=12% Similarity=0.076 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
|.+.+++.+.......|+ +.....+|++.++++++ ..++|++|+|+++++..++..+. .++|.|++.+++|..
T Consensus 101 p~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~--~pgd~Vlv~~P~y~~ 177 (431)
T PRK15481 101 PDLSRYFARLSRTPRLYG-DAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL--LPGDSVAVEDPCFLS 177 (431)
T ss_pred HHHHHHHHHhhhhhhhcC-CcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC--CCCCEEEEeCCCcHH
Confidence 456666666544322333 33445678888888764 24699999999999999997663 467899999999987
Q ss_pred CchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 017633 88 HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
+...+.. .|..+...+.. ..++ |+++++++++. +++++++.|+++|++....+.+.+++|.
T Consensus 178 ~~~~~~~-~g~~~~~v~~~-~~g~--------------~~~~l~~~~~~---~~k~i~~~p~p~NPTG~~~s~~~~~~l~ 238 (431)
T PRK15481 178 SINMLRY-AGFSASPVSVD-AEGM--------------QPEKLERALAQ---GARAVILTPRAHNPTGCSLSARRAAALR 238 (431)
T ss_pred HHHHHHH-cCCeEEeeccC-CCCC--------------CHHHHHHHHhc---CCCEEEECCCCCCCCCccCCHHHHHHHH
Confidence 7544443 33333222121 1122 78999999873 5677777765555433444566699999
Q ss_pred HHHHHh-CCEEEEehhhhch-hcccCcccc-ccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 168 RITKEN-GALLIFDEVMTGF-RLAYGGAQE-YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 168 ~l~~~~-~~~li~De~~~~~-~~g~~~~~~-~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
++|++| ++++|+||+|.+| ..+...... .......+.||||.+++|+|+||+++++++++.+... ....+++.|
T Consensus 239 ~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~---~~~~~~~~s 315 (431)
T PRK15481 239 NLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLR---LNSGTQWVS 315 (431)
T ss_pred HHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHHHHHHHH---HhccccCCC
Confidence 999999 9999999999888 332111111 1122234569999999999999999999888877521 122334578
Q ss_pred HHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 245 PLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
.+++.++.++++ +.++ .+..++..+..++.+.+.+...+.....+..|.++|+.+. . +.
T Consensus 316 ~~~q~a~~~~l~---~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~-------------~--~~ 377 (431)
T PRK15481 316 HLLQDLVYACLT---DPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLD-------------T--DS 377 (431)
T ss_pred HHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECC-------------C--CH
Confidence 888888887776 3333 2223333333333333444444443334566778888762 1 24
Q ss_pred HHHHHHHHHcCeeecCCCCC-------ccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 322 ARFYRGMLEEGVYFAPSQFE-------AGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~-------~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
.++++.|.++||.+.++..+ .+|+++. .+++++++++++|++++++
T Consensus 378 ~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 378 QATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALNR 431 (431)
T ss_pred HHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 67888999999999997422 3466655 4789999999999998753
No 106
>PRK08068 transaminase; Reviewed
Probab=99.97 E-value=4.2e-28 Score=222.12 Aligned_cols=322 Identities=15% Similarity=0.080 Sum_probs=200.7
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
+....+|.+.+++.+.+.......| +.....+|++++++++ + .++ ++++|+|+++++..++..+ ..+++
T Consensus 42 p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~--~~~gd 119 (389)
T PRK08068 42 PDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCL--MNPGD 119 (389)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh--CCCCC
Confidence 3333456788888887765322223 4455677888888775 3 345 7999999999999887655 24678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++..++|..+...+ ...|..+...+.....++. -|++++++.+.. +++++++...+|++|.+
T Consensus 120 ~vlv~~P~y~~~~~~~-~~~g~~~~~i~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~l~~P~NPTG~~ 183 (389)
T PRK08068 120 TILVPDPGYPDYLSGV-ALARAQFETMPLIAENNFL------------PDYTKIPEEVAE---KAKLMYLNYPNNPTGAV 183 (389)
T ss_pred EEEEcCCCCcchHHHH-HhcCCEEEEeecccccCCC------------CCHHHHHHhccc---cceEEEEECCCCCCCCc
Confidence 8999999998764443 3344433222221111211 178888888762 45555555334556665
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-Ccc-cccc---CCCcchhhhhhhcc-CCccceeeeehHHHHHHh
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGA-QEYF---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~-~~~~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~ 229 (368)
++.+ .+++|+++|++|++++|+||+|.++ ..+. ... .... +....+.||||.|+ +|+|+||+++++++++.+
T Consensus 184 ~s~~-~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l 262 (389)
T PRK08068 184 ATKA-FFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAI 262 (389)
T ss_pred CCHH-HHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHH
Confidence 5544 4999999999999999999999877 4432 111 1111 12234569999998 899999999999988887
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
.... .....+.+++.+.++..++. ..+.+.++.++..+..++.+.+.+...+.....+..+.++|+.+.
T Consensus 263 ~~~~---~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~------ 331 (389)
T PRK08068 263 NLLQ---DHLFVSLFGAIQDAAIEALL--SDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVP------ 331 (389)
T ss_pred HHHH---hhccCCCChHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECC------
Confidence 6322 11222344455566555553 112333333333333333444433344433222333455677662
Q ss_pred cchhcccccHHHHHHHHHHHH-cCeeecCCC------CCccccccCCCHHHHHHHHHHHHHH
Q 017633 310 FEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
...++.++++.|++ +||.+.++. ..++|+++..+++.+.+++++|+++
T Consensus 332 -------~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 332 -------KGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred -------CCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 22235789999986 599999863 2356777777888888888888764
No 107
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.97 E-value=6.1e-28 Score=219.81 Aligned_cols=327 Identities=16% Similarity=0.168 Sum_probs=218.5
Q ss_pred CceeccCC-CcHHHHHHHHHHHHc-------CCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc
Q 017633 2 PQLIILFP-SYLQVLAALGETMKK-------GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.++++||. .+|++++++.+++++ ...++.....+.+|+++++++++..+.++++ ||+.++..++..+ ..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~-sG~~a~~~~i~~l--~~ 80 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYS-DGASTTSSTVAAF--AK 80 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEec-CcHHHHHHHHHHh--CC
Confidence 46788888 889999999999987 2233444568999999999999765555554 6888888777655 35
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-----------CCCeE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-----------KGEIA 142 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-----------~~~~~ 142 (368)
++|.|++.+..|... ...+.+.+ .++..++++|.+++++.+... .++++
T Consensus 81 ~GD~Vl~~~~~h~s~-~~~~~l~~-------------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 81 RGDLLVVDRGVNEAL-LVGVSLSR-------------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred CCCEEEEeccccHHH-HHHHHHcC-------------------CeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcE
Confidence 778888777655433 22222221 123334555666666544321 13678
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc--CccccccCCCc----chhh--hhhhccCC
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQEYFGVTP----DLTT--LGKIIGGG 213 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~~~~~~~~~----di~s--~sK~~~~G 213 (368)
++++|++++++|.+.+ +++++++|++||+++|+||+|+ + ..|. .+..+++++.| |+++ +||+++
T Consensus 141 ~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-- 213 (392)
T PLN03227 141 FLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-- 213 (392)
T ss_pred EEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh--
Confidence 9999999999999999 9999999999999999999995 4 2222 25677888877 8765 556554
Q ss_pred ccceeeeehHHHHHHhcCCCCccccccCCCC--HHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 214 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--PLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 214 ~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
++.|++++++++++.++. ..+..+++.+ +..+.++.+++.. +..+++.++++++.+++++.|++. ..+....
T Consensus 214 ~~gg~v~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~~~~~~~ 288 (392)
T PLN03227 214 SVGGMTVGSEEVVDHQRL---SGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--SHPYALK 288 (392)
T ss_pred ccCcEEecCHHHHHHHHH---hCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCccccc
Confidence 566778888888877652 2233455554 7677777777754 444568889999999999999862 2222112
Q ss_pred Ee--------eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-----cc--------ccccCC
Q 017633 291 GG--------YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-----AG--------FTSLAH 349 (368)
Q Consensus 291 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-----~~--------~~~~~~ 349 (368)
++ ..++++.+.+....... ...+.....++++.|+++|+.+.+.+.. .. +++..+
T Consensus 289 ~rg~~~~~~~~~~~i~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~ 364 (392)
T PLN03227 289 LRNRLVITSDPISPIIYLRLSDQEATR----RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASH 364 (392)
T ss_pred cccccccCCCCCCCEEEEEeCCHHHhh----hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCC
Confidence 22 23567777773211000 0000112358899999999998653211 11 124556
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 017633 350 SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 350 ~~~~i~~~~~~l~~~l~~ 367 (368)
|++|+++++++|++++.+
T Consensus 365 t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 365 TREDIDKLLTVLGEAVEA 382 (392)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999999865
No 108
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.4e-28 Score=222.53 Aligned_cols=309 Identities=14% Similarity=0.102 Sum_probs=215.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
|+|| .+|++++++.+.+.... .++.....+|++.++++++ ++++|++++|+++++..++.++. .+++.|++.++
T Consensus 39 n~~~-~~~~v~~a~~~~~~~~~--~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~--~~gd~vlv~~P 113 (366)
T PRK01533 39 NPFG-CSPRVLDELQKSWLDHA--LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVL--KAGDNIVTAGA 113 (366)
T ss_pred CCCC-CCHHHHHHHHHHHHhcC--cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc--CCCCEEEEcCC
Confidence 3444 67789999988765532 3466677899999999998 78999999999999999987662 46788999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|......+ ...|..+...+. ..+.. |+++++++++. +++++++...+|++|.+++.++ +
T Consensus 114 ~y~~~~~~~-~~~g~~v~~v~~--~~~~~-------------d~~~l~~~~~~---~~~~v~i~~P~NPTG~~~~~~~-l 173 (366)
T PRK01533 114 TFPQYRHHA-IIEGCEVKEVAL--NNGVY-------------DLDEISSVVDN---DTKIVWICNPNNPTGTYVNDRK-L 173 (366)
T ss_pred cHHHHHHHH-HHcCCEEEEeec--CCCCc-------------CHHHHHHHhCc---CCcEEEEeCCCCCCCCCcCHHH-H
Confidence 887765443 333433322111 11111 89999988863 4555555544555676666444 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC-ccc---cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~---~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
++|+++|++++ ++|+||+|.+| ..+.. ... +..+....+.||||.++ +|+|+||+++++++++.+....
T Consensus 174 ~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~---- 248 (366)
T PRK01533 174 TQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVR---- 248 (366)
T ss_pred HHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhc----
Confidence 99999998876 57789999887 33211 111 11122334569999999 9999999999999988887422
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+++.|.+++.++.++++ ++++.+++.+..+..++++.+.+...+.. ...+.++++|+.+.
T Consensus 249 -~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~-~~~~~~nf~~~~~~-------------- 309 (366)
T PRK01533 249 -LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIP-FYQSQTNFIFLPVE-------------- 309 (366)
T ss_pred -CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCc-cCCCcCcEEEEeCC--------------
Confidence 346789999999888875 44566666666666666666666555543 33456778888651
Q ss_pred cHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+..++.+.|+++||.|++. ...+|++ ..+.+++++++++|+++++
T Consensus 310 --~~~~~~~~l~~~GI~Vr~~-~~~iRis-~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 310 --NGGEIYEACAHAGFIIRPF-PNGVRIT-VGTREQNEGVISVLQQHFE 354 (366)
T ss_pred --CHHHHHHHHHHCCcEEccC-CCceEEe-CCCHHHHHHHHHHHHHHHH
Confidence 1367899999999999985 2344554 4477999999999998874
No 109
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=9.3e-28 Score=219.85 Aligned_cols=321 Identities=14% Similarity=0.092 Sum_probs=204.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhh----CC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISA----VP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+++++.+.+.+....+.+.....++++.++++ ++ .++++++++|+++++..++.... .+++.|++..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~gd~vl~~~ 115 (382)
T PRK06108 38 TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV--GPGDEVVAVT 115 (382)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc--CCCCEEEEeC
Confidence 366899999888766433233334445566655554 34 46899999999999999987663 4678899988
Q ss_pred CCCCCCchhhhhhcCCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+.|...... ....|..+...+... ..++. .|++++++.++ +++++++++..+|++|.++ +.+
T Consensus 116 p~y~~~~~~-~~~~g~~~~~v~~~~~~~~~~------------~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~-~~~ 178 (382)
T PRK06108 116 PLWPNLVAA-PKILGARVVCVPLDFGGGGWT------------LDLDRLLAAIT---PRTRALFINSPNNPTGWTA-SRD 178 (382)
T ss_pred CCccchHHH-HHHCCCEEEEeeCCCCCCCcc------------CCHHHHHHhcC---ccceEEEEECCCCCCCccc-CHH
Confidence 888765433 333343332221111 01110 17899998886 3566666655555567665 455
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hc-ccC-cc-cccc---CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RL-AYG-GA-QEYF---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~-g~~-~~-~~~~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
.+++|+++|++||+++|+||+|.++ .. +.. .. .+.. +...-+.||||.++ +|+|+||+++++++++.+..
T Consensus 179 ~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~-- 256 (382)
T PRK06108 179 DLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEK-- 256 (382)
T ss_pred HHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHH--
Confidence 5999999999999999999999888 43 211 11 1111 11122568999998 79999999999988887763
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccch
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
.....+.+++.+.+.++..+++.. +++.+.++++.+..++.+.+.+.+. +.....+..+.++|+.+..
T Consensus 257 -~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~-------- 325 (382)
T PRK06108 257 -LIEYNTSCVAQFVQRAAVAALDEG--EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPG-------- 325 (382)
T ss_pred -HHHhcccCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCC--------
Confidence 222344567888888887777521 2333444444444444554444433 2222222335556766521
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|+ ++||.+.++. ..++|+++..+++++++++++|++++++
T Consensus 326 -----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 326 -----VTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLAR 382 (382)
T ss_pred -----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhC
Confidence 123467888886 5799998863 2346777777999999999999998753
No 110
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=7.4e-28 Score=220.55 Aligned_cols=321 Identities=13% Similarity=0.087 Sum_probs=200.6
Q ss_pred CcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+.+++.+.+.....+ +.+.....+|++++++++ + +++ +|++|+|+++++..++.++. .++|.|++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~--~~gd~Vlv 121 (388)
T PRK07366 44 APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL--NPGDFALL 121 (388)
T ss_pred CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC--CCCCEEEE
Confidence 3678899998877543222 223345567777777765 3 356 69999999999999887652 46789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|..+...+.. .|..+.........++. .|++++++.+. ++++++++.+.+|++|.+.+.
T Consensus 122 ~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~- 184 (388)
T PRK07366 122 LDPGYPSHAGGVYL-AGGQIYPMPLRAENDFL------------PVFADIPTEVL---AQARLMVLSYPHNPTTAIAPL- 184 (388)
T ss_pred cCCCCcchHHHHHh-cCCEEEEEECCCccCCC------------CCHHHHHHhhc---ccceEEEEeCCCCCCCccCCH-
Confidence 99999887544433 33333222221111111 16778877665 245666666655666766654
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccC--cccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~--~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
+.+++|+++|++||++||+||+|.++ ..+.. ...... .....+.||||.++ +|+|+||+++++++++.+...
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~ 264 (388)
T PRK07366 185 SFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQV 264 (388)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHH
Confidence 44999999999999999999999988 43321 111111 11233469999998 899999999999998887632
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
. ....++..+..+.++.+++. ..+++.++.++..+..++.+.+.+.+.+.....+..+.++|+.+....
T Consensus 265 ~---~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~------ 333 (388)
T PRK07366 265 K---AVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPW------ 333 (388)
T ss_pred H---hhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCccc------
Confidence 2 11222222333344444442 123344444444444444444444444443334556778888763210
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..+..++++.|+ ++||.+.|+. ..++|+++..+++++++++++|++++
T Consensus 334 -----~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 334 -----QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred -----CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 012467777774 6799999973 23467777778999999999998764
No 111
>PRK08960 hypothetical protein; Provisional
Probab=99.97 E-value=8.2e-28 Score=220.10 Aligned_cols=322 Identities=15% Similarity=0.102 Sum_probs=207.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+++++.+.+......+.+.....++++.+++++ + +++++++|+|+++++..++... ..+++.|++.+
T Consensus 46 ~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~--~~~gd~vlv~~ 123 (387)
T PRK08960 46 TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLL--VDPGKHWLLAD 123 (387)
T ss_pred CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHh--cCCCCEEEEcC
Confidence 3668999998888753222334455667777777765 2 5789999999999999998766 35788999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|..+...+. ..+.++...++....++. .|++++++.+++ ....+++++| +|++|.+++. +.
T Consensus 124 p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~--~~~~i~i~~p-~NPtG~~~~~-~~ 186 (387)
T PRK08960 124 PGYPCNRHFLR-LVEGAAQLVPVGPDSRYQ------------LTPALVERHWNA--DTVGALVASP-ANPTGTLLSR-DE 186 (387)
T ss_pred CCCcchHHHHH-hcCCeEEEEecCcccCCC------------CCHHHHHHHhCc--cceEEEEECC-CCCCCcCcCH-HH
Confidence 99988754433 334333222221111110 178999988873 2334455554 4556666654 44
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCcc-ccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~ 239 (368)
+++|+++|++||+++|+||+|.++ ..+.... .........+.||||.++ +|+|+||+++++++++.+.. .....
T Consensus 187 ~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~---~~~~~ 263 (387)
T PRK08960 187 LAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEK---LAQNL 263 (387)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHH---HHhhh
Confidence 999999999999999999999887 4322111 111111223458999998 89999999999988887763 22334
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhccccc
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
+.+.+.+.+.++.++++. ..+.+.++.++..+..++.+.+.+...+... ..+..+.++|+++... .
T Consensus 264 ~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~------------~ 330 (387)
T PRK08960 264 YISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAF------------G 330 (387)
T ss_pred ccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEecccc------------C
Confidence 456688888887777641 1123333333333444444545444444332 2344566777765310 1
Q ss_pred HHHHHHHHHHH-HcCeeecCCCC-------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 319 TKFARFYRGML-EEGVYFAPSQF-------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 319 ~~~~~~~~~l~-~~Gi~~~~~~~-------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+..++++.|+ ++||.+.|+.. .++|+++..+.+++.+++++|++++.
T Consensus 331 ~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 331 GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 22467888876 57999998721 24567777788899999999988764
No 112
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-27 Score=218.92 Aligned_cols=314 Identities=18% Similarity=0.110 Sum_probs=199.6
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++++++.+........+.+.....+|++.+++++ + +++++++|+|+++++..++.++ ..+++.|++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~--~~~gd~vlv~~p 121 (384)
T PRK06348 44 DESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSI--LDPGDEVIIHEP 121 (384)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHh--cCCCCEEEEeCC
Confidence 355666555544432222233344456777777665 2 5789999999999999998766 346789999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|.+....+... |..+...+....+++. .|++++++.++. ++++++++..+|++|.++ +.+.+
T Consensus 122 ~y~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~l~~p~NPtG~~~-s~~~~ 184 (384)
T PRK06348 122 YFTPYKDQIEMV-GGKPIILETYEEDGFQ------------INVKKLEALITS---KTKAIILNSPNNPTGAVF-SKETL 184 (384)
T ss_pred CCcchHHHHHHc-CCEEEEecCCcCcCCc------------CCHHHHHHhhCc---CccEEEEeCCCCCCCcCC-CHHHH
Confidence 988765444433 3332221111111210 178999998863 455555554445566655 45559
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
++|.++|++||+++|+||+|.++ ..+........ +....+.||||.++ +|+|+||+++++++++.+.. ...
T Consensus 185 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~---~~~ 261 (384)
T PRK06348 185 EEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKI---INE 261 (384)
T ss_pred HHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHH---HHH
Confidence 99999999999999999999988 43322111111 12233569999999 89999999999988887762 223
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCH----HHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccch
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGT----YEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
..+++.+.+++.++..+++.. +.+ .+.++++++.+++.|.+ .+ .....+..+.++|+.+..
T Consensus 262 ~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~~~~~~L~~----~~~~~~~~p~gg~~~~~~~~~-------- 327 (384)
T PRK06348 262 GICFSAPTISQRAAIYALKHR--DTIVPLIKEEFQKRLEYAYKRIES----IPNLSLHPPKGSIYAFINIKK-------- 327 (384)
T ss_pred hccCCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHhc----CCCceeccCCeeEEEEEeccc--------
Confidence 345677888888887777521 223 33344444444444433 32 222223345566776521
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
...+..+++..|+ ++||.+.|+.. ..+|+++..+++++++++++|++.
T Consensus 328 ----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 328 ----TGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ----CCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 1123577888887 46999998742 346677778899999999998764
No 113
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=7.5e-28 Score=218.58 Aligned_cols=312 Identities=14% Similarity=0.094 Sum_probs=209.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|++++++.+.+.....| +.....+|++.++++++ +++++++++|+++++..++.++. .+++.|++.+++|...
T Consensus 46 ~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~--~~gd~vlv~~p~y~~~ 121 (369)
T PRK08153 46 PSPSVIAAMREAAAEIWKY--GDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV--EPGDPVVTSLGAYPTF 121 (369)
T ss_pred CCHHHHHHHHHHHHHhhcC--CCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc--CCCCEEEECCCcchHH
Confidence 6778999998876543333 33347899999999997 77899999999999999887652 4678899988888776
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
...+.. .|..+...++ .... .|++++++.+.. ++++++++...+|++|.+.+.++ ++++++
T Consensus 122 ~~~~~~-~g~~~~~vp~--~~~~-------------~~~~~l~~~~~~--~~~~~i~l~~P~NPtG~~~~~~~-l~~l~~ 182 (369)
T PRK08153 122 NYHVAG-FGGRLVTVPY--RDDR-------------EDLDALLDAARR--ENAPLVYLANPDNPMGSWHPAAD-IVAFIE 182 (369)
T ss_pred HHHHHH-cCCeEEEeeC--CCCC-------------CCHHHHHHHhcc--cCCcEEEEeCCCCCCCCCCCHHH-HHHHHH
Confidence 433332 2332222111 1111 167887766653 24555555333444566665444 888888
Q ss_pred HHHHhCCEEEEehhhhch-hcccCccccc-cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 169 ITKENGALLIFDEVMTGF-RLAYGGAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~-~~g~~~~~~~-~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|+ ++++||+||+|.++ ..+....... ......+.||||.++ +|+|+||+++++++++.+.... .+++.++
T Consensus 183 ~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~-----~~~~~s~ 256 (369)
T PRK08153 183 ALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVR-----NHFGMNR 256 (369)
T ss_pred hCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhh-----cCCCCCH
Confidence 777 49999999999887 4332211111 111122569999999 8999999999999988876422 3457889
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
+++.++.++++ ++++.++.++..+..++.+.+.+...+.. ..+..++++++.+.. +...+.++.
T Consensus 257 ~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~------------~~~~a~~l~ 320 (369)
T PRK08153 257 IAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGR------------DGAFARAVL 320 (369)
T ss_pred HHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCC------------CcccHHHHH
Confidence 99999888875 44566666766667777776666555543 234556666665421 123457899
Q ss_pred HHHHHcCeeec-CCC---CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 326 RGMLEEGVYFA-PSQ---FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 326 ~~l~~~Gi~~~-~~~---~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.|+++||.++ ++. ..++|+++. +++++++++++|++++..
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~~-~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSCG-PDEELDLFAEALPEALEA 365 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 99999999996 442 234566655 789999999999998753
No 114
>PRK07505 hypothetical protein; Provisional
Probab=99.96 E-value=2.1e-27 Score=218.24 Aligned_cols=315 Identities=17% Similarity=0.197 Sum_probs=207.7
Q ss_pred ceeccC-CCcHHHHHHHHHHHHcCC--CCC-----CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH--h
Q 017633 3 QLIILF-PSYLQVLAALGETMKKGT--SFG-----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--F 72 (368)
Q Consensus 3 ~~~~~g-~~~~~v~~a~~~~~~~~~--~~~-----~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~--~ 72 (368)
+.+++| |++|+|++++.+++++.. .++ ...+...++++.+++.++. ..++.+||++|++.+++++.. .
T Consensus 53 s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG~~a~~~ai~~~~~~~~ 130 (402)
T PRK07505 53 SCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSCSAAHLGILPLLASGHL 130 (402)
T ss_pred cCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECChHHHHHHHHHHHHhccc
Confidence 457888 999999999999998631 211 2356789999999999865 556566899999999987643 1
Q ss_pred c-CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 73 T-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 73 ~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+ ++..+|+++.+||++..... .... .+.+++.+|++|+++++++++. +...+++++|+++
T Consensus 131 ~~~~~~vi~~~~~~H~s~~~~~----------------~~~~-~~~~v~~~~~~d~~~l~~~~~~--~~~~~vl~~p~~~ 191 (402)
T PRK07505 131 TGGVPPHMVFDKNAHASLNILK----------------GICA-DETEVETIDHNDLDALEDICKT--NKTVAYVADGVYS 191 (402)
T ss_pred CCCCCCEEEEchhhhHhHHhhh----------------hhhh-cCCeEEEeCCCCHHHHHHHHhc--CCCEEEEEecccc
Confidence 2 34568888999998431100 0000 1134666777899999999864 2567888889876
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhh--hch-hcccCccccccCC-Ccchh----hhhhhccCCccceeeee-h
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVM--TGF-RLAYGGAQEYFGV-TPDLT----TLGKIIGGGLPVGAYGG-R 222 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~--~~~-~~g~~~~~~~~~~-~~di~----s~sK~~~~G~~iG~v~~-~ 222 (368)
+ |.+.+ +++|.++|++||++||+||+| .++ +.|..+..+.++. .+|.. |+||+++++ .|+++. +
T Consensus 192 ~-G~~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~ 264 (402)
T PRK07505 192 M-GGIAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGD 264 (402)
T ss_pred c-CCcCC----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCC
Confidence 6 55677 899999999999999999999 344 4555444556665 56643 899999843 377754 7
Q ss_pred HHHHHHhcCCCCccccccCC--CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceE-E
Q 017633 223 RDIMEMVAPAGPMYQAGTLS--GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF-G 299 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~ 299 (368)
+++++.+.... +..+++ .++++++++.++++.+.++.+.+ +.+++++++........ ....+.+.++ +
T Consensus 265 ~~~~~~~~~~~---~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~----~~~~l~~~~~~~~~~~~--~~~~g~~~~i~~ 335 (402)
T PRK07505 265 AEQIELILRYA---GPLAFSQSLNVAALGAILASAEIHLSEELDQ----LQQKLQNNIALFDSLIP--TEQSGSFLPIRL 335 (402)
T ss_pred HHHHHHHHHhC---CCceeCCCCCHHHHHHHHHHHHHHhccCcHH----HHHHHHHHHHHHHHHHH--hcCCCCCCCEEE
Confidence 78888776322 233333 45678888888888665444332 22333333322111000 0112222222 2
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+ ++.....++.+.|+++||.+++... ..+| +++.++++|+++++++|++++.+
T Consensus 336 ~~~-------------~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 336 IYI-------------GDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EEe-------------CCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 222 1223457899999999999987521 2334 45668999999999999998754
No 115
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.7e-27 Score=216.67 Aligned_cols=308 Identities=14% Similarity=0.143 Sum_probs=202.4
Q ss_pred CcHHHHHHHHHHHHcC--CCCCCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKG--TSFGAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+++++.+.+... ...+|+.....+|++.+++++ + ++++|++|+|+++++..++.++. .+++.|++
T Consensus 40 ~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~--~~gd~v~v 117 (368)
T PRK03317 40 PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFG--GPGRTALG 117 (368)
T ss_pred CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhc--CCCCEEEE
Confidence 7778999998876531 123345555678888888887 2 57899999999999999997663 46788999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|+.+..... ..+..+.. ++..++.. -|+++++++++++ ++++++++..+|++|.+.+
T Consensus 118 ~~P~y~~~~~~~~-~~g~~~~~--~~~~~~~~------------~d~~~l~~~~~~~--~~~~i~l~~p~NPtG~~~~-- 178 (368)
T PRK03317 118 FVPSYSMHPIIAR-GTHTEWVE--GPRAADFT------------LDVDAAVAAIAEH--RPDVVFLTSPNNPTGTALP-- 178 (368)
T ss_pred eCCChHHHHHHHH-hcCCeeEE--cccCCCCC------------CCHHHHHHHHhcc--CCCEEEEeCCCCCCCCCCC--
Confidence 9999987654332 22222211 11111110 1789999998743 4455555555666788887
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchh---hhhhhcc-CCccceeeeehHHHHHHhcCCCCc
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~---s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
.+++.++++.+++++|+||+|.+| +.+........+..++++ ||||.++ +|+|+||+++++++++.+....
T Consensus 179 --~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~-- 254 (368)
T PRK03317 179 --LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVR-- 254 (368)
T ss_pred --HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcC--
Confidence 667777777778999999999988 444332233333334443 9999998 8999999999999998887422
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE-EeecCCCcccchhc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF-FFTEGPVYNFEDAK 314 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 314 (368)
.+++.++++++++.++++.. +.+.++.+ ..+..++.+.+.+...+.. ...+.++++.+ .+
T Consensus 255 ---~~~~~s~~~~~a~~~~l~~~--~~~~~~~~-~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~------------ 315 (368)
T PRK03317 255 ---LPYHLSAVTQAAARAALRHA--DELLASVA-ALRAERDRVVAWLRELGLR-VAPSDANFVLFGRF------------ 315 (368)
T ss_pred ---CCCCCCHHHHHHHHHHhhCH--HHHHHHHH-HHHHHHHHHHHHHHHCCCE-eCCCCCcEEEEecc------------
Confidence 35677889999888887632 22222221 1222333344444444432 22233444333 21
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCC-CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+..++.+.|+++||.+.+.+. .++|+++. +.+++++++++|++++.
T Consensus 316 ----~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~-~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 316 ----ADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG-TPEENDAFLAALAEVLA 363 (368)
T ss_pred ----CCHHHHHHHHHHCCEEEEeCCCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 1246789999999999998653 44566644 67889999999998874
No 116
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=218.47 Aligned_cols=317 Identities=14% Similarity=0.086 Sum_probs=200.4
Q ss_pred CcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+++++.+.+...... +.+.....+|++++++++ + +.+ .+++|+|+++++..++..+ ..++|.|++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~--~~~gd~Vl~ 122 (385)
T PRK09276 45 TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAF--VNPGDVVLV 122 (385)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHh--CCCCCEEEE
Confidence 4567888888877643222 222334566777777665 3 344 5888999999999998766 356789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.+++|......+. ..|.++...+.....++. .|++++++.+. ++++++++++.+|++|.+++ .
T Consensus 123 ~~P~y~~~~~~~~-~~g~~~~~v~~~~~~g~~------------~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~-~ 185 (385)
T PRK09276 123 PDPGYPVYKIGTI-FAGGEPYFMPLKEENGFL------------PDLDAIPEDVA---KKAKLMFINYPNNPTGAVAD-L 185 (385)
T ss_pred cCCCCcChHHHHH-HcCCEEEEEecCCCCCCc------------CCHHHHHHhcc---ccceEEEEeCCCCCCCCCCC-H
Confidence 9999987644333 334433322221111211 17888888776 35666666644555676655 4
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc---cc-cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~---~~-~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+.+++|+++|++||+++|+||+|.++ ..+.. ... +. .+....+.||||.++ +|+|+||+++++++++.+....
T Consensus 186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~ 265 (385)
T PRK09276 186 EFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVK 265 (385)
T ss_pred HHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHH
Confidence 44999999999999999999999877 43321 111 11 123345679999998 8999999999999888876322
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.....+.+.+.+.++..+++. .+.+.++.++..+..++.+.+.+.+.+.....+..+.++|+.+.
T Consensus 266 ---~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~---------- 330 (385)
T PRK09276 266 ---SNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVP---------- 330 (385)
T ss_pred ---hhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECC----------
Confidence 122234566677776666641 13344444444444444454444444433222334455677652
Q ss_pred cccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHH
Q 017633 314 KKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
+..+..++++.|+ ++||.+.++. ..++|+++..+++++.+++++|.+
T Consensus 331 ---~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 331 ---KGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ---CCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 2223577888887 4799999973 234677777888889888888864
No 117
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=3.4e-27 Score=216.07 Aligned_cols=322 Identities=15% Similarity=0.106 Sum_probs=205.8
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+.+++.+.+......+.+.....++++.+++++ + ..++|++|+|+++++..++..+ ..+++.|++.+
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~--~~~gd~vl~~~ 122 (391)
T PRK07309 45 PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI--LEPGDKVLLPA 122 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh--cCCCCEEEEeC
Confidence 566888888877653222334444566777777755 2 1368999999999999998765 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|.+.. ......|.++............ |++++++++++..++++++++...+|++|.+.+.++
T Consensus 123 p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~-------------d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~- 187 (391)
T PRK07309 123 PAYPGYE-PIVNLVGAEIVEIDTTENDFVL-------------TPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQ- 187 (391)
T ss_pred CCCcchH-HHHHHcCCEEEEEecCCcCCcC-------------CHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHH-
Confidence 9988864 3334444433221111100011 789999998764346777776644555676665554
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc--CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF--GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~--~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
+++|+++|++||+++|+||+|.++ ..+.. ...... +....+.||||.++ +|+|+||+++++++++.+... ..
T Consensus 188 ~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~---~~ 264 (391)
T PRK07309 188 IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS---HQ 264 (391)
T ss_pred HHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHH---Hh
Confidence 999999999999999999999887 43322 121111 22233568999998 899999999999988887632 12
Q ss_pred cccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
....+++.+++.++...++.... ..+.+.+.++++.+.+.|+ +.+.....+..+.++|+.+...
T Consensus 265 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~p~gg~~~~~~l~~~---------- 330 (391)
T PRK07309 265 YLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMT----DLGFKIIKPDGAFYIFAKIPAG---------- 330 (391)
T ss_pred hcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH----HCCCeecCCCeeEEEEEECCCC----------
Confidence 23346677888887766652110 1123344444444444443 3443323333455566655211
Q ss_pred cccHHHHHHHHHH-HHcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l-~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.+ .++||.+.|+. ..++|+++..+.+++++++++|++++++
T Consensus 331 -~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 331 -YNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEE 388 (391)
T ss_pred -CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 011246778765 46899999874 2345777777889999999999999865
No 118
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=7.8e-28 Score=227.25 Aligned_cols=324 Identities=10% Similarity=0.026 Sum_probs=198.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++++++++.+++..... |.+.....+|++++++++ + .+++|++++|+++++..++..+ ..++|.|++..
T Consensus 163 ~p~~~~~~~~~~~~~~~~-Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l--~~~Gd~Vli~~ 239 (517)
T PRK13355 163 TPDEVVYDMAQQLTDTEG-YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSAL--LDDGDEVLIPS 239 (517)
T ss_pred CCHHHHHHHHHHhhcCCC-CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHh--CCCCCEEEEcC
Confidence 356788888887765333 334455788888888877 3 5789999999999999998766 35788999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|..+..... ..|..+.........++. .|+++++++++ ++++++++...+|++|.+.+ .+.
T Consensus 240 P~y~~y~~~~~-~~g~~~v~~~~~~~~~~~------------~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~-~~~ 302 (517)
T PRK13355 240 PDYPLWTACVN-LAGGTAVHYRCDEQSEWY------------PDIDDIRSKIT---SRTKAIVIINPNNPTGALYP-REV 302 (517)
T ss_pred CCCcCHHHHHH-HCCCEEEEeecCcccCCC------------CCHHHHHHhcC---cCceEEEEECCCCCCCcCcC-HHH
Confidence 99987654433 333332221111111111 18999999886 35565544444555676665 555
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc--CC-Ccchhhhhhhcc-CCccceeeee--hHHH----HHHhc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF--GV-TPDLTTLGKIIG-GGLPVGAYGG--RRDI----MEMVA 230 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~--~~-~~di~s~sK~~~-~G~~iG~v~~--~~~~----~~~~~ 230 (368)
+++|+++|++||++||+||+|.+| +.+.. .....+ +. ...+.||||.++ +|||+||+++ ++++ ++.+.
T Consensus 303 l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~ 382 (517)
T PRK13355 303 LQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLN 382 (517)
T ss_pred HHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHH
Confidence 999999999999999999999888 44421 111111 11 112358999998 8999999984 3433 33332
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVY 308 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
. .....++.+.+++.++.++++.... +.+.+..++..+ .++.+.+.+.+. ++....+..++++|+.+.....
T Consensus 383 ~----~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~-~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~- 456 (517)
T PRK13355 383 M----LANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYE-QRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKF- 456 (517)
T ss_pred H----HhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHH-HHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccC-
Confidence 1 1112345677888888777741100 112222111111 233344444444 3322333334455555532100
Q ss_pred ccchhcccccHHHHHHH-HHHHHcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 309 NFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..+++ +.|.++||.+.|+. ..++|+++..+++++++++++|++++.+
T Consensus 457 --------~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 457 --------NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred --------CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 001124444 55677899999873 2346788888999999999999999864
No 119
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=2.8e-27 Score=216.16 Aligned_cols=313 Identities=14% Similarity=0.102 Sum_probs=197.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCh----hHHHHHHHHHhhCC-C---CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCL----LENVLAEMVISAVP-S---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~-~---~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+.+++.+.+......+.+.. +.+++++++++.++ . .+++++|+|+++++..++... ..++|.|++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l--~~~gd~Vlv~ 120 (384)
T PRK12414 43 PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL--VHPGDEVIYF 120 (384)
T ss_pred CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh--cCCCCEEEEe
Confidence 367788888877664322222333 34444444445455 2 257999999999999988765 3577899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|...... ....|..+............ |++++++.++ +++++++++..+|++|.++++ +
T Consensus 121 ~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~~-------------d~~~l~~~l~---~~~~~v~i~~p~NPTG~~~s~-~ 182 (384)
T PRK12414 121 EPSFDSYAPI-VRLQGATPVAIKLSPEDFRV-------------NWDEVAAAIT---PRTRMIIVNTPHNPSATVFSA-A 182 (384)
T ss_pred CCCccchHHH-HHHcCCEEEEEecCcccccc-------------CHHHHHhhcC---cccEEEEEcCCCCCCCcCCCH-H
Confidence 9998764333 33334332221111111111 7899998886 356767666555667776654 4
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCc-ccc-ccC---CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQE-YFG---VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~-~~~---~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
.+++|+++|++||+++|+||+|.++ ..+... ... ..+ ....+.||||.++ +|+|+||+++++++++.+..
T Consensus 183 ~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~--- 259 (384)
T PRK12414 183 DLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRK--- 259 (384)
T ss_pred HHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHH---
Confidence 4999999999999999999999887 443221 111 111 2234568999998 89999999999998887763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.....+++.+.+++.++...++ +.. ..+.++++++.+.+.|++ .+.....+..+.++|+.+....
T Consensus 260 ~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~gg~~~~~~~~~~~---- 328 (384)
T PRK12414 260 VHQFMVFSADTPMQHAFAEALA---EPASYLGLGAFYQRKRDLLARELAG----SRFELLPSEGSFFMLARFRHFS---- 328 (384)
T ss_pred HHhheecCCCcHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCcceEEEEcccccC----
Confidence 2233456778888888776664 222 234444555544444444 3432222334456565553110
Q ss_pred chhcccccHHHHHHH-HHHHHcCeeecCCC--------CCccccccCCCHHHHHHHHHHHHH
Q 017633 311 EDAKKSETTKFARFY-RGMLEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~--------~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
+. ...+++ +.|.++||.+.|+. .+++|+++..+++++++++++|.+
T Consensus 329 ------~~-~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 ------DE-SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred ------CC-CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 11 124555 55667899999973 234677777889999999999875
No 120
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=2.9e-27 Score=216.19 Aligned_cols=320 Identities=15% Similarity=0.065 Sum_probs=200.4
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+++++.+.+.+....+.+.....+|++.+++++ + +++ ++++|+|+++|+..++... ..+++.|++..
T Consensus 43 ~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l--~~~gd~Vl~~~ 120 (387)
T PRK07683 43 PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTI--LEPGTEVILPA 120 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh--CCCCCEEEEcC
Confidence 467889998888753222334455667777777765 2 355 8999999999999998765 34678899999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
+.|.++.... ...|..+...... ..++. .|.+++++.++. +++++++...+|++|.++++.+
T Consensus 121 p~y~~~~~~~-~~~g~~~~~~~~~-~~~~~------------~~~~~l~~~~~~---~~~~i~i~~p~NPtG~~~s~~~- 182 (387)
T PRK07683 121 PIYPGYEPII-RLCGAKPVFIDTR-STGFR------------LTAEALENAITE---KTRCVVLPYPSNPTGVTLSKEE- 182 (387)
T ss_pred CCccchHHHH-HHcCCEEEEeecC-cccCC------------CCHHHHHHhcCc---CceEEEEeCCCCCCCcCCCHHH-
Confidence 8888764443 3334433221111 11110 067888888863 4566666555555676665444
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
+++|+++|+++|+++|+||+|.++ ..+.......+ +....+.||||.++ +|+|+||+++++++++.+... .
T Consensus 183 ~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~---~ 259 (387)
T PRK07683 183 LQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKV---H 259 (387)
T ss_pred HHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHH---H
Confidence 999999999999999999999887 43322121111 12233568999999 999999999999988887632 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.....+.+.+++.++...++.. +.+.++.++..+..++.+.+.+...+.....+..+.++|..+...
T Consensus 260 ~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------- 326 (387)
T PRK07683 260 QYNVTCASSISQYAALEALTAG--KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHF----------- 326 (387)
T ss_pred HhccCCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccC-----------
Confidence 2223345677777776666421 222333333333333333333333343222233344555443210
Q ss_pred ccHHHHHHHHHH-HHcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l-~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..+++..+ .++||.+.++. ..++|+++..+++++.+++++|.+++.+
T Consensus 327 -~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 327 -TMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred -CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 11235677664 56799999974 2346777777899999999999998753
No 121
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=3.4e-27 Score=213.12 Aligned_cols=317 Identities=15% Similarity=0.099 Sum_probs=202.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhc-CCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFT-GRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~-~~~~vi~ 80 (368)
.+|++++++.+.......|. ......+|++.+++++ + +.+ +|++|+|+++++..++..+.... ++|.|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~ 92 (350)
T TIGR03537 14 TPPFIRKALIDAVPEVSQYP-SALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIF 92 (350)
T ss_pred CCHHHHHHHHHHHhccCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEE
Confidence 46789999888765433332 2334567777777664 3 355 89999999999998887653311 1268999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|..+...+. ..|.++.........++. -|++++++++.+ +++++++++.+|++|.+.+ .
T Consensus 93 ~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~~-~ 155 (350)
T TIGR03537 93 GTPGYPVYERGAL-FAGGEPTAVKLKKEDGFL------------LRLEKVEKSILE---ETKIVWINYPHNPTGATAP-R 155 (350)
T ss_pred cCCCCcchHHHHH-hcCCEEEEcccCcccCCc------------cCHHHHHHhhhh---ccEEEEEeCCCCCcCcccC-H
Confidence 9999987755443 344433322221111210 179999998873 5676766665566676555 4
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccC--CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG--VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~--~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
+.+++|+++|++||+++|+||+|..+ ..+........+ ...-+.||||.++ +|+|+||+++++++.+.+....
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~--- 232 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLR--- 232 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHH---
Confidence 44999999999999999999999876 322221111111 2233458999997 8999999999988888776321
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
...+.+.+.+++.++.+++. .+++.++.+++.+..++.+.+.+...+.....+..+.++|+.+.
T Consensus 233 ~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~------------- 296 (350)
T TIGR03537 233 ANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVP------------- 296 (350)
T ss_pred HhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECC-------------
Confidence 22233455566666665553 34444444444444444555544444443233334556677652
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHH
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
......++++.|.++||.+.++.. .++|+++..+++++++++++|++
T Consensus 297 ~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 297 SGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred CCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 222347899999999999998632 33567766788999999998875
No 122
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.9e-27 Score=213.52 Aligned_cols=319 Identities=13% Similarity=0.067 Sum_probs=203.7
Q ss_pred CcHHHHHHHHHHHHcCCC--CCC---CChhHHHHHHHHHhhCC---C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTS--FGA---PCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~--~~~---~~~~~~~l~~~l~~~~~---~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+++++.+.+..... |.. ..+....+++.+++.++ + .+++++++|+++++..++..+ ..++|.|++
T Consensus 41 ~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~--~~~gd~Vlv 118 (389)
T PRK05957 41 PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI--TDPGDEIIL 118 (389)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh--cCCCCEEEE
Confidence 456788999887765322 221 12455666677766655 2 568999999999998888655 246788999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.++.|..+.. .....|..+.........++ |++++++.++ ++++++++.+.+|++|.+.+..
T Consensus 119 ~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 119 NTPYYFNHEM-AITMAGCQPILVPTDDNYQL--------------QPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred eCCCCcCHHH-HHHhcCCEEEEeecCCCCCc--------------CHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHH
Confidence 8888866533 23333443322211111111 7999999886 3566666666666677766655
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc----cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ----EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~----~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+ +++|+++|++||+++|+||+|.++ ..+.. ... +.......+.||||.++ +|+|+||+++++++++.+...
T Consensus 181 ~-~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~- 258 (389)
T PRK05957 181 L-LRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKI- 258 (389)
T ss_pred H-HHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHH-
Confidence 5 999999999999999999999887 43221 111 11112344679999998 899999999999998888732
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCC--ceEEeeccceEEEEeecCCCcccc
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH--AICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
......+.+.+++.++..+++. .+++.++..+..+..++.+.+.+...+. ....+..+.++|+.+.
T Consensus 259 --~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~-------- 326 (389)
T PRK05957 259 --QDTILICPPVVSQYAALGALQV--GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVN-------- 326 (389)
T ss_pred --HhhcccCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCC--------
Confidence 2222334566777777666641 1223333333333334444444433321 2122333556677652
Q ss_pred hhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+ ++||.+.|+.. .++|+++. .+++++++++++|.+.+.+
T Consensus 327 -----~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 327 -----TDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred -----CCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 1223578999987 57999999742 24667664 5889999999999988764
No 123
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.2e-27 Score=216.51 Aligned_cols=324 Identities=14% Similarity=0.069 Sum_probs=206.5
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++.+++++.+.+......+.+.....+|++.+++++ + +++++++|+|+++++..++..+ ..+++.|++.++
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--~~~g~~Vlv~~p 125 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESL--LEEGDEVIIPDP 125 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHh--cCCCCEEEEcCC
Confidence 456788888776653333335556678888888765 2 4689999999999999988765 346788999998
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|..... .....|..+...+.....+.. .|++++++.++. +++++++...+|++|.+++ .+.+
T Consensus 126 ~y~~~~~-~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~---~~~~v~i~~p~NPtG~~~~-~~~~ 188 (391)
T PRK08361 126 AFVCYVE-DAKIAEAKPIRIPLREENEFQ------------PDPDELLELITK---RTRMIVINYPNNPTGATLD-KEVA 188 (391)
T ss_pred CCcccHH-HHHHcCCEEEEEecCCccCCC------------CCHHHHHHhccc---ccEEEEEeCCCCCCCcCcC-HHHH
Confidence 8877543 333444433322221111110 189999998873 4565655544555676665 4459
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc--CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF--GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~--~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~ 238 (368)
++|+++|+++++++|+||+|.++ ..+.. ...... ....-+.||||.++ +|+|+||+++++++++.+.. ....
T Consensus 189 ~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~---~~~~ 265 (391)
T PRK08361 189 KAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIK---LHAY 265 (391)
T ss_pred HHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHH---HHhh
Confidence 99999999999999999999877 43321 111111 12223458999999 89999999999888877652 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+++.+.+.+.++..+++.-...++.++.++..+..++.+.+.+... +.....+..+.++|+.+.. .
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~------------~ 333 (391)
T PRK08361 266 IIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDE------------T 333 (391)
T ss_pred hccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCC------------C
Confidence 34466777777776666421111233444444444444444444443 2222222334566766531 1
Q ss_pred cHHHHHHHHHHHH-cCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 318 TTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 318 ~~~~~~~~~~l~~-~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..+..++++.|++ +||.+.|+. ..++|+++..+++++++++++|+++++++
T Consensus 334 ~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 334 GMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEEL 391 (391)
T ss_pred CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhcC
Confidence 1234678888875 799999863 13467777788999999999999998764
No 124
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.5e-27 Score=216.13 Aligned_cols=327 Identities=15% Similarity=0.107 Sum_probs=203.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+.+++.+.+......+| +.....+|++.+++++ + ..+ ++++|+|+++++..++.+.. .++|.|++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~--~~gd~Vlv 124 (403)
T PRK08636 47 TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT--NPGDVAIV 124 (403)
T ss_pred CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC--CCCCEEEE
Confidence 345677777776654222222 3345556666666654 3 345 79999999999999997663 46889999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHH----HHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS----ALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.+++|.+....+.. .|.++...+.....+. .+ |++ .++++++++..++++++++..+|++|.+
T Consensus 125 ~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~---------~~---d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~ 191 (403)
T PRK08636 125 PDPAYPIHSQAFIL-AGGNVHKMPLEYNEDF---------EL---DEDQFFENLEKALRESSPKPKYVVVNFPHNPTTAT 191 (403)
T ss_pred cCCCCcchHHHHHh-cCCEEEEEeccccccC---------cc---ChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCcc
Confidence 99999886544333 3443322111111110 01 444 5677776544466666666445556665
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHh
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~ 229 (368)
++.++ +++|+++|++|++++|+||+|.++ ..+.. .....+ +....+.||||.++ +|+|+||+++++++++.+
T Consensus 192 ~s~~~-~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~ 270 (403)
T PRK08636 192 VEKSF-YERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGAL 270 (403)
T ss_pred CCHHH-HHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHH
Confidence 55555 999999999999999999999887 44321 111111 12233568999997 899999999999988877
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
... .....++.+.+++.++..+++. .+.+.+++++..+..++.+.+.+...+.....+..|.++|+.+....
T Consensus 271 ~~~---~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~--- 342 (403)
T PRK08636 271 KKI---KSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPA--- 342 (403)
T ss_pred HHH---HHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCcc---
Confidence 631 1222345556666665544431 12344444444344444444444444433233456778888763210
Q ss_pred cchhcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 310 FEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..+++..++ ++||.+.|+. ..++|+++..+++++++++++|++++..
T Consensus 343 -------~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 343 -------RHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -------CCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 0112467887755 6799999973 2346777778999999999999998864
No 125
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2.9e-27 Score=216.32 Aligned_cols=317 Identities=15% Similarity=0.095 Sum_probs=201.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+.+++.+.+.......| +.....+|++.+++++ + ..+ ++++|+|+++++..++.++ ..++|.|++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~--~~~gd~vlv 120 (383)
T TIGR03540 43 TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAF--VNPGDIVLV 120 (383)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHh--CCCCCEEEE
Confidence 355688888887654322222 2334566777766654 2 234 6899999999999998766 356789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.+++|...... ....|.++...+.....++. -|++++++.+. ++++++++++.+|++|.+++ .
T Consensus 121 ~~P~y~~~~~~-~~~~G~~v~~v~~~~~~g~~------------~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~-~ 183 (383)
T TIGR03540 121 PDPGYPVYRIG-TLFAGGEPYEMPLKEENGFL------------PDFDAIPEDIA---KKAKLMFINYPNNPTGAVAP-L 183 (383)
T ss_pred eCCCCcchHHH-HHhcCCEEEEEecCcccCCc------------cCHHHHHhhcc---ccceEEEEeCCCCCcCccCC-H
Confidence 99999876544 33344433322221111211 17888888876 35666666644555666554 5
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+.+++|+++|++||+++|+||+|.++ ..+. ...... ......+.||||.++ +|+|+||+++++++++.+....
T Consensus 184 ~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~ 263 (383)
T TIGR03540 184 KFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVK 263 (383)
T ss_pred HHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHH
Confidence 55999999999999999999999877 4331 111111 122344679999998 8999999999999888776322
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.....+.+.+.+.++..+++.. +.+.+.+++..+..++.+.+.+.+.+.....+..+.++|+.+.
T Consensus 264 ---~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~---------- 328 (383)
T TIGR03540 264 ---TNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVP---------- 328 (383)
T ss_pred ---HhcccCCChHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECC----------
Confidence 2223345667777766666421 3344444444444444455544445543233334556777762
Q ss_pred cccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHH
Q 017633 314 KKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
+..+..++++.|+ ++||.+.++. ...+|+++..+++++.+++++|++
T Consensus 329 ---~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 329 ---EGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ---CCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 2223578888876 6799999873 234677777888889998888864
No 126
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=3.3e-27 Score=216.17 Aligned_cols=323 Identities=17% Similarity=0.139 Sum_probs=203.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+.+++.+.+......+.+.....+|++.+++++ + .++ ++++|+|+++++..++... ..+++.|++.
T Consensus 40 ~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~--~~~gd~Vlv~ 117 (387)
T PRK08912 40 GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLAL--VEPGDEVVLF 117 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHh--cCCCCEEEEe
Confidence 4567888887776543222223344566666666654 2 355 8999999999998888655 2467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|...... ....|..+...+........ |++++++.+. ++++++++...+|++|.+.+.++
T Consensus 118 ~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~-------------~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~ 180 (387)
T PRK08912 118 QPLYDAYLPL-IRRAGGVPRLVRLEPPHWRL-------------PRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREE 180 (387)
T ss_pred CCCchhhHHH-HHHcCCEEEEEecCcccCcC-------------CHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHH
Confidence 9888765433 33444433222221111111 7899998886 35565655544555676666544
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-cc-cccc---CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYF---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~-~~~~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|+++|++|++++|+||+|.++ ..+.. .. .... +....+.||||.++ +|+|+||+++++++++.+...
T Consensus 181 -~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~-- 257 (387)
T PRK08912 181 -LALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKA-- 257 (387)
T ss_pred -HHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHH--
Confidence 999999999999999999999877 43321 11 1111 12234568999999 999999999999988877632
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....++.++..+.++..++. ..+++.+..++..+..++.+.+.+...+.....+..+.++|+.+....
T Consensus 258 -~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~-------- 326 (387)
T PRK08912 258 -HQFLTFTTPPNLQAAVAYGLG--KPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLG-------- 326 (387)
T ss_pred -HhhccccCChHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccC--------
Confidence 122335556666666665553 123333344444444444444444444433223334556777663210
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCCC--------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQF--------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~~--------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+ ++||.+.++.. .++|+++..+++++++++++|++++.+
T Consensus 327 --~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 327 --LAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred --CCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 0123577888886 57999998632 346777777899999999999998764
No 127
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=216.27 Aligned_cols=318 Identities=14% Similarity=0.103 Sum_probs=204.3
Q ss_pred CcHHHHHHHHHHHHcCC-CCCCCChhHHHHHHHHHhhCC---------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 10 SYLQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVP---------SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~---------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+|.+++++.+.+.... ...|+.....+|+++++++++ ++++|++|+|+++++..++.... .++++.|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~-~~g~~~Vl 120 (374)
T PRK02610 42 LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATC-LGGEGSIL 120 (374)
T ss_pred CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc-CCCCCeEE
Confidence 66789999988776532 123455667889999988874 35789999999999987765432 23334799
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCCCCcccC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 158 (368)
+..++|..+...+ ...|..+...........+ |++++++++++. .++++++++.+.+|++|.+++
T Consensus 121 v~~P~y~~~~~~~-~~~g~~~~~~~~~~~~~~~-------------d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s 186 (374)
T PRK02610 121 VAEPTFSMYGILA-QTLGIPVVRVGRDPETFEI-------------DLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT 186 (374)
T ss_pred EcCCChHHHHHHH-HHcCCEEEEecCCcccCCC-------------CHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCC
Confidence 9999987764433 3334433222211111111 799999988741 125676666555666777666
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
.++ ++++.++| +++++|+||+|.+| ...............-+.||||.++ +|+|+||+++++++++.+....
T Consensus 187 ~~~-l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~--- 260 (374)
T PRK02610 187 AAE-LEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVR--- 260 (374)
T ss_pred HHH-HHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhc---
Confidence 554 88888887 49999999999887 3211111111111223569999997 8999999999999988887422
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
..++.+.+++.++..+++.. +.+.+.+++..+. ++.+.+.+...+.....+..++++|+.+.
T Consensus 261 --~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~f~~~~l~------------- 322 (374)
T PRK02610 261 --LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPSAANFLYLRLS------------- 322 (374)
T ss_pred --CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcceEEEEeCC-------------
Confidence 23456788888877666521 2333343433333 44444444444222233556677777652
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++++.|.++||.++++. ..+|+++.. .+++++++++|++++..+
T Consensus 323 ~~~~~~~~~~~l~~~gi~v~~~~-~~lRls~~~-~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 323 QDAALAALHQALKAQGTLVRHTG-GGLRITIGT-PEENQRTLERLQAALTQL 372 (374)
T ss_pred CCCCHHHHHHHHHHCCEEEEeCC-CeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence 22235788899999999998653 456777654 567899999999988653
No 128
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=3.6e-27 Score=216.51 Aligned_cols=313 Identities=12% Similarity=0.029 Sum_probs=197.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C-C---C-CeEEEeCChHHHHHHHHHHHHHh-cCCceEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P-S---I-EMVRFVNSGTEACMGVLRLARAF-TGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~-~---~-~~v~~~~~gt~a~~~al~~~~~~-~~~~~vi 79 (368)
.++.+++++.+.+.....|+ ......+|++.+++++ + . + +++++|+|+++++..++++.... ..++.|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vl 121 (396)
T PRK09147 43 TPAFIKDALAANLDGLASYP-TTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVV 121 (396)
T ss_pred CCHHHHHHHHHHhhhhcCCC-CCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEE
Confidence 35678888877665433332 2233455666666543 4 2 3 48999999999999998866331 1167899
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|....... ...|.++...+.....++. -|++++++.+.. +++++++...+|++|.+++
T Consensus 122 v~~P~y~~~~~~~-~~~g~~~~~vp~~~~~~~~------------~d~~~l~~~~~~---~~k~i~l~nP~NPTG~~~s- 184 (396)
T PRK09147 122 CPNPFYQIYEGAA-LLAGAEPYFLNCDPANNFA------------PDFDAVPAEVWA---RTQLLFVCSPGNPTGAVLP- 184 (396)
T ss_pred EcCCCccchHHHH-HhcCCEEEEeccCccccCc------------cCHHHHHHHHhh---ccEEEEEcCCCCCcCccCC-
Confidence 9999887764443 3334433322221111110 178899887752 5666666544555666555
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hccc--Ccc-c---cc-----cCCCcchhhhhhhcc-CCccceeeeehHHHH
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA-Q---EY-----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 226 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~-~---~~-----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~ 226 (368)
.+.+++|+++|++|+++||+||+|.++ ..+. ... . .. .+....+.||||.++ +|+|+||++++++++
T Consensus 185 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~ 264 (396)
T PRK09147 185 LDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALL 264 (396)
T ss_pred HHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHH
Confidence 555999999999999999999999887 4332 110 1 01 122234569999987 899999999999988
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH----HHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
+.+... ....+++.+.+.+.++.+++. .+.+. +.++++++.+.+.|.+ . .....+..+.++|+++
T Consensus 265 ~~~~~~---~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~----~-~~~~~p~~g~f~~~~~ 333 (396)
T PRK09147 265 KKFLLY---RTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAP----V-LDVQLPDAGFYLWAKV 333 (396)
T ss_pred HHHHHH---hhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHH----h-cCCCCCCeeEEEEEEC
Confidence 877632 122345677788877666653 22333 3334444444444433 2 2223345677888876
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC------------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF------------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
. ....++++.|+ ++||.+.|+.. .++|+++..+++++++++++|++++.
T Consensus 334 ~---------------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 334 P---------------GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred C---------------CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 2 11367888876 57999988731 23567777889999999999998874
No 129
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=4.7e-27 Score=215.91 Aligned_cols=323 Identities=14% Similarity=0.091 Sum_probs=202.7
Q ss_pred cHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 11 YLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
++.+++++.+.+.......| +.....+|++.+++++ + .++ +|++|+|+++++..++.... .++|.|++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~--~~gd~Vl~~ 122 (405)
T PRK09148 45 PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT--APGDVILCP 122 (405)
T ss_pred CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc--CCCCEEEEc
Confidence 56788888777644222222 3344567777777655 3 345 89999999999999987663 467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+++|......+.. .|..+...+...... .++++++.+..+.+++++++++..+|++|.+++ .+
T Consensus 123 ~P~y~~~~~~~~~-~g~~v~~v~~~~~~~---------------~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s-~~ 185 (405)
T PRK09148 123 NPSYPIHAFGFIM-AGGVIRSVPAEPDEE---------------FFPALERAVRHSIPKPIALIVNYPSNPTAYVAD-LD 185 (405)
T ss_pred CCCCcccHHHHHh-cCCEEEEEeCCCCCC---------------CccCHHHHHhhccccceEEEEeCCCCCCCcCCC-HH
Confidence 9999887544433 333322211110000 234455555543345565555544555666665 44
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCc-ccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
.+++|.++|++||+++|+||+|.++ ..+... ..... +....+.||||.++ +|+|+||+++++++++.+..
T Consensus 186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~--- 262 (405)
T PRK09148 186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTR--- 262 (405)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHH---
Confidence 4999999999999999999999887 433211 11111 12234579999999 89999999999999888863
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....+++.+.+++.++...++. .+.+.++.++..+..++.+.+.+.+.+.....+..+.++|+.+....
T Consensus 263 ~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~-------- 332 (405)
T PRK09148 263 VKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAF-------- 332 (405)
T ss_pred HHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCcc--------
Confidence 22333456677888887766641 13344444444444444444444444443223445667777753210
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......+++..|+ ++||.+.|+. ..++|+++..+.+++.+++++|.+++.+
T Consensus 333 --~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 333 --RHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 0112467888776 6899999973 2345677777899999999999988753
No 130
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=215.44 Aligned_cols=318 Identities=12% Similarity=0.054 Sum_probs=198.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++++.+++.+.+.....+.| +.....+|++++++++ + .++ .+++|+|+++++..++..+ ..++|.|++
T Consensus 49 ~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~--~~~gd~Vlv 126 (394)
T PRK05942 49 APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAY--VNPGDVVLV 126 (394)
T ss_pred CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHh--CCCCCEEEE
Confidence 345678877776654322222 3344567777777765 3 355 5889999999999998765 357889999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|.+..... ...|..+.........++. -|++++++.+. +++++++++..+|++|.+++.+
T Consensus 127 ~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~ 190 (394)
T PRK05942 127 PSPAYPAHFRGP-LIAGAQIYPIILKPENDWL------------IDLSSIPEEVA---QQAKILYFNYPSNPTTATAPRE 190 (394)
T ss_pred cCCCCcchHHHH-HHcCCEEEEeecCCccCCc------------cCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHH
Confidence 999998764443 3333333221111111110 17899988886 3677777664455566655544
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cc---cc-ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA---QE-YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~---~~-~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+ +++|+++|++||+++|+||+|.++ ..+.. .. .. ..+....+.||||.|+ +|+|+||+++++++++.+....
T Consensus 191 ~-~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~ 269 (394)
T PRK05942 191 F-FEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLK 269 (394)
T ss_pred H-HHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHH
Confidence 4 999999999999999999999877 43321 11 11 1123345679999997 8999999999999988887322
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
....++.+.+++.++..+++.. +.+.++.++..+..++.+.+.+...+.....+..+.++|+.+..
T Consensus 270 ---~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~--------- 335 (394)
T PRK05942 270 ---TNLDYGIFSALQKAAETALQLP--DSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPV--------- 335 (394)
T ss_pred ---hhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCC---------
Confidence 2234456777777777777522 22333333333333444444443344332233344477777631
Q ss_pred cccccHHHHHHHHHH-HHcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHH
Q 017633 314 KKSETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l-~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
..+..+++..+ .++||.+.++. ..++|+++..+.+.+.+++++|.++
T Consensus 336 ----~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 336 ----GMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred ----CCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 11235666655 47899998863 2345666666677777888777765
No 131
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=7.3e-27 Score=216.05 Aligned_cols=316 Identities=17% Similarity=0.144 Sum_probs=220.0
Q ss_pred HHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 13 QVLAALGETMKKG----TSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 13 ~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+.+.+.+.+... ..++.+......|++.+++++ + .+++|++|+|+.+|++++++++ ..++|.|++-
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l--~~pGd~v~vE 185 (459)
T COG1167 108 ALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL--LDPGDTVLVE 185 (459)
T ss_pred HHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHh--CCCCCEEEEc
Confidence 3555555554331 123344466777777777765 2 4679999999999999988877 3478999999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+++|++....+ ...|.++...+.. .+++ |+++||+.++++ +++++++.|..+|++....+.+
T Consensus 186 ~PtY~~~~~~~-~~~g~~~~~vp~d-~~G~--------------~~e~le~~~~~~--~~k~~y~~P~~qNPtG~tms~~ 247 (459)
T COG1167 186 DPTYPGALQAL-EALGARVIPVPVD-EDGI--------------DPEALEEALAQW--KPKAVYVTPTFQNPTGVTMSLE 247 (459)
T ss_pred CCCcHHHHHHH-HHcCCcEEecCCC-CCCC--------------CHHHHHHHHhhc--CCcEEEECCCCCCCCCCccCHH
Confidence 99999864333 3333333222111 3333 899999999975 7899999999988655666667
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-C---ccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-G---GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~---~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
..++|.++|++||+++|+||.|..+ ..+. . .+.+..+....+.||||.+.+|+|+||+++++++++.+.. ..
T Consensus 248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~---~k 324 (459)
T COG1167 248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLR---LK 324 (459)
T ss_pred HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHH---HH
Confidence 7999999999999999999999988 4433 2 3334445566788999999999999999999998888873 33
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH---HHHhcC---CceEEeeccceEEEEeecCCCccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIID---AGKKAG---HAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
+..+.+++.+.+.+...-+. +..+.+++++.++.++++..- .+.++. ..+..+..|.++|+.+.
T Consensus 325 ~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~------- 394 (459)
T COG1167 325 QAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP------- 394 (459)
T ss_pred HHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC-------
Confidence 55666778888777554444 344555555555444444333 333331 23344455778888873
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecC-CCCC--------cccccc-CCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAP-SQFE--------AGFTSL-AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~-~~~~--------~~~~~~-~~~~~~i~~~~~~l~~~l~~ 367 (368)
+..+..++...++++|+.+.+ +..+ .+++++ ..+++++++++.+|.+++.+
T Consensus 395 ------~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 395 ------EGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLRE 455 (459)
T ss_pred ------CCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 445578999999999999998 4211 234544 44799999999999998864
No 132
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=4e-27 Score=217.20 Aligned_cols=333 Identities=14% Similarity=0.070 Sum_probs=204.3
Q ss_pred ceeccCCCc----------HHHHHHHHHHHHcCCC-CCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHH
Q 017633 3 QLIILFPSY----------LQVLAALGETMKKGTS-FGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMG 64 (368)
Q Consensus 3 ~~~~~g~~~----------~~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~ 64 (368)
.++++|+++ +++++++.+++..... .+.+.....++++.+++++. ++++|++|+|+++|+..
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l 132 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEI 132 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHH
Confidence 456677664 4688998888875322 22334456777777777752 46899999999999999
Q ss_pred HHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEE
Q 017633 65 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 144 (368)
Q Consensus 65 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~ 144 (368)
++.... .++|+|++..++|+.+... ....+..+....+....++. -|+++++++++. +...++
T Consensus 133 ~~~~l~--~~Gd~Vlv~~P~y~~y~~~-~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~~~i~ 195 (430)
T PLN00145 133 IMSVLA--QPGANILLPRPGYPLYEAR-AVFSGLEVRHFDLLPERGWE------------VDLEGVEALADE--NTVAMV 195 (430)
T ss_pred HHHHhc--CCCCEEEEcCCCCccHHHH-HHHcCCEEEEeeCCcccCCc------------CCHHHHHHHhCc--CceEEE
Confidence 997662 4678999999998875433 33333333222111111111 189999988873 234455
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc---CCCcchhhhhhhcc-CCcccee
Q 017633 145 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF---GVTPDLTTLGKIIG-GGLPVGA 218 (368)
Q Consensus 145 ~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~---~~~~di~s~sK~~~-~G~~iG~ 218 (368)
+++| +|++|.+.+.++ +++|+++|++||+++|+||+|.++ +.+.. .....+ .....+.||||.++ +|||+||
T Consensus 196 i~~P-~NPtG~v~~~~~-l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 196 IINP-NNPCGSVYSYEH-LAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EeCC-CCCCCCCCCHHH-HHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEE
Confidence 5555 555676555444 999999999999999999999887 44322 111111 12234568999987 8999999
Q ss_pred eee--hHHHHH------HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-Cce
Q 017633 219 YGG--RRDIME------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAI 289 (368)
Q Consensus 219 v~~--~~~~~~------~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~ 289 (368)
+++ ++.+++ .+.. . .....+.+.+.+.++..+++.- .+++.++..+..+..++.+.+.+...+ ...
T Consensus 274 iv~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~ 348 (430)
T PLN00145 274 IATCDPNGILKETKVVDSIRN---Y-LNISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIKEIKCITC 348 (430)
T ss_pred EEEecchhhhhhhHHHHHHHH---H-hcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 986 333332 2221 1 1122245678888877776521 123333333333333333444443332 221
Q ss_pred -EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCC----CCccccccCCCHHHHHHHHHHHHH
Q 017633 290 -CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
..+..+.++|+.+..... +...+..+++..|+ ++||.+.|+. .+++|+++..+++++++++++|++
T Consensus 349 ~~~P~ga~y~~v~l~~~~~--------~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~ 420 (430)
T PLN00145 349 PHKPEGSMFVMVKLDLSCL--------SGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKS 420 (430)
T ss_pred CcCCCeeeEEEeccChhhc--------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 234556677776532100 00112456776565 6699999974 235677888899999999999999
Q ss_pred HHhh
Q 017633 364 VLRQ 367 (368)
Q Consensus 364 ~l~~ 367 (368)
++.+
T Consensus 421 ~~~~ 424 (430)
T PLN00145 421 FCLR 424 (430)
T ss_pred HHHH
Confidence 8864
No 133
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.5e-27 Score=213.71 Aligned_cols=305 Identities=14% Similarity=0.090 Sum_probs=204.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+++++.+.+... .+|+.....+|++.++++++ .++++++|+|+++++..+++++ ..+++.|++.+++|...
T Consensus 44 ~~~~~~~~~~~~~~~~--~~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~--~~~gd~V~v~~P~y~~~ 119 (357)
T PRK14809 44 PSPAAVEAIREAAERV--HSYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAM--LDPGDTVLVPDPGFAYY 119 (357)
T ss_pred CCHHHHHHHHHHHhhh--hcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh--cCCCCEEEEeCCChHHH
Confidence 5667889998877643 33455567899999999998 7899999999999999998766 34678999999988644
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
.. .....+.++...+++...++. .+.+++++... +++++++++.+|++|.+++.+ .++++++
T Consensus 120 ~~-~~~~~g~~~~~~~l~~~~~~~------------~~~~~~~~~~~----~~k~i~l~~p~NPTG~~~s~~-~~~~l~~ 181 (357)
T PRK14809 120 GM-SARYHHGEVREYPVSKADDFE------------QTADTVLDAYD----GERIVYLTSPHNPTGSEIPLD-EVEALAE 181 (357)
T ss_pred HH-HHHHcCCeEEEEecccCcCCC------------cCHHHHHHhhc----CCcEEEEeCCCCCCCcCCCHH-HHHHHHH
Confidence 33 233334333222221111110 15666655442 355555555556667666544 4888888
Q ss_pred HHHHhCCEEEEehhhhch-hcccCc-cccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 169 ITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~-~~g~~~-~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|++ ++++|+||+|.+| ..+... ..+..+....+.||||.++ +|+|+||+++++++++.+... ..+++.+.
T Consensus 182 ~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~-----~~~~~~~~ 255 (357)
T PRK14809 182 RTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARV-----NTPFAASE 255 (357)
T ss_pred hCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHh-----CCCCCCCH
Confidence 8865 7899999999888 432211 1122223345679999998 899999999999998888742 23566788
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
+++.++.++++ ++++.++.++..+..++.+.+.+.... .+..+.++|+.+. +..++.
T Consensus 256 ~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~----------------~~~~~~ 312 (357)
T PRK14809 256 LACRAGLAALD---DDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVG----------------DASAVA 312 (357)
T ss_pred HHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECC----------------CHHHHH
Confidence 88888777764 344555555555555555555443322 2355777787652 136788
Q ss_pred HHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 326 RGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 326 ~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+.|.++||.+.++.. .++|+++. +++++++++++|+++++
T Consensus 313 ~~l~~~gv~v~~g~~f~~~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 313 EAAQERGVIVRDCTSFGLPECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHCCEEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 899999999998753 24566644 57899999999999875
No 134
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=5.8e-27 Score=216.03 Aligned_cols=317 Identities=19% Similarity=0.194 Sum_probs=211.9
Q ss_pred ceeccCC-CcHHHHHHHHHHHHcCC-------CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFP-SYLQVLAALGETMKKGT-------SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~-~~~~v~~a~~~~~~~~~-------~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+++++|. .+|.+++++.+++++.. .++...+...+|++.++++++..+. ++.+||++|+..++.+.....+
T Consensus 53 sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~-i~~~sG~~a~~~~i~~l~~~~~ 131 (410)
T PRK13392 53 SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESA-LLFTSGYVSNDAALSTLGKLLP 131 (410)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHHhcCCC
Confidence 4567777 68999999999988742 1122334688999999999986554 5555689999999975532223
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGNS 153 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~~ 153 (368)
++ +++.+..+|+.....+...|..+ ..++++|.+++++.+.+. .+++++++++++++++
T Consensus 132 g~-~vi~~~~~h~s~~~~~~~~g~~~-------------------~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~t 191 (410)
T PRK13392 132 GC-VILSDALNHASMIEGIRRSGAEK-------------------QVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMD 191 (410)
T ss_pred CC-EEEEehhhhHHHHHHHHHcCCeE-------------------EEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence 44 44555567776544444333322 222334777788877643 2468899999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCC--Ccchh--hhhhhcc-CCccceeeeehHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIG-GGLPVGAYGGRRDI 225 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~--~~di~--s~sK~~~-~G~~iG~v~~~~~~ 225 (368)
|.+.+ +++|.++|++||+++|+||+|+ ++ ..|... ....+. .+|++ ||||+++ .| ||+++++++
T Consensus 192 G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~ 263 (410)
T PRK13392 192 GDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADL 263 (410)
T ss_pred ccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhccc---chhhcCHHH
Confidence 99888 9999999999999999999996 44 222221 223333 24554 8999998 33 788888888
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
++.++.....+. .+.+.++++++++.++++.+... ...+++.++++++++.|++. ++. ...+.++++.+.+.
T Consensus 264 ~~~l~~~~~~~~-~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~~~~i~~~- 336 (410)
T PRK13392 264 IDFVRSFAPGFI-FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN----GIP-VMPSPSHIVPVMVG- 336 (410)
T ss_pred HHHHHHhCcchh-ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCC-CCCCCCCEEEEEeC-
Confidence 887764332222 24456778888888999876543 23455667777777777663 322 12234455444431
Q ss_pred CCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC-------Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~-------~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+....++++.|+ ++||.+.+... ..+|+ +...+++|+++++++|++++++
T Consensus 337 ------------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 337 ------------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred ------------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 2234578999987 57999987532 23443 4578999999999999998765
No 135
>PRK08363 alanine aminotransferase; Validated
Probab=99.96 E-value=5.3e-27 Score=215.52 Aligned_cols=326 Identities=16% Similarity=0.049 Sum_probs=200.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+++++.+.+......+.+.....+|++.+++++ + +++++++|+|+++++..++..+ ..++|.|++..
T Consensus 47 p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~--~~~gd~Vl~~~ 124 (398)
T PRK08363 47 PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL--LDPGDEILIPG 124 (398)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh--CCCCCEEEEcC
Confidence 4667888888877653333334566778888888875 2 4679999999999999998766 35778999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|......+...++..+...... ..++. .|++++++.++ ++++++++...+|++|.+.+.++
T Consensus 125 p~y~~~~~~~~~~g~~~v~~~~~~-~~~~~------------~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~- 187 (398)
T PRK08363 125 PSYPPYTGLVKFYGGVPVEYRTIE-EEGWQ------------PDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKT- 187 (398)
T ss_pred CCCcchHHHHHHcCCEEEEecccc-ccCCc------------CCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHH-
Confidence 888876544333332222110111 11110 17888988886 34565555544555676665454
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccC---CCcchhhhhhhcc-CCccceeeee--hHHHHHHhcCCCCc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGG--RRDIMEMVAPAGPM 235 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~--~~~~~~~~~~~~~~ 235 (368)
+++|+++|++||+++|+||+|.++ ..+.......+. ...-+.||||.++ +|+|+||+++ ++++++.+......
T Consensus 188 ~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~ 267 (398)
T PRK08363 188 LKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDK 267 (398)
T ss_pred HHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHH
Confidence 999999999999999999999877 433221111111 1223469999987 8999999986 66655554321101
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ccceEEEEeecCCCcccchhc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....++.+.+++.++.+++.. .+++.+..++..+..++.+.+.+...+......+ .+.++|+.+....
T Consensus 268 ~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~-------- 337 (398)
T PRK08363 268 LARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGP-------- 337 (398)
T ss_pred HhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCC--------
Confidence 1112356788888887777752 1334434333333444444444433322112223 3444554542100
Q ss_pred ccccHHHHHHH-HHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFY-RGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~-~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..+++ ..|.++||.+.++.. .++|+++..+++++++++++|++++.+
T Consensus 338 ---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 338 ---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred ---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 01124454 556788999998742 245777777899999999999998754
No 136
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.7e-27 Score=214.47 Aligned_cols=326 Identities=16% Similarity=0.124 Sum_probs=206.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+.+++.+.+......+.+.....+|++.+++++ + ..+++++++|+++++..++..+ ..+++.|++..
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~--~~~gd~vl~~~ 122 (393)
T PRK05764 45 TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL--LDPGDEVIIPA 122 (393)
T ss_pred CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh--cCCCCEEEecC
Confidence 4678889888877653222334455677777777765 2 4578999999999999988765 34678899998
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|.+.... ....|.++.........++. -|++++++.++ ++++++++...+|++|.+.+.. .
T Consensus 123 p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~-~ 185 (393)
T PRK05764 123 PYWVSYPEM-VKLAGGVPVFVPTGEENGFK------------LTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPE-E 185 (393)
T ss_pred CCCcchHHH-HHHcCCEEEEEecCcccCCc------------CCHHHHHHhhC---ccceEEEEECCCCCCCcccCHH-H
Confidence 888765433 33334433221111111110 17899999886 3455555544455566665544 4
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc-----cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-----EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~-----~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|+++|++||+++|+||+|.++ ..+.. ... +..+....+.||||.++ +|+|+||+++++++++.+..
T Consensus 186 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~--- 262 (393)
T PRK05764 186 LEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSK--- 262 (393)
T ss_pred HHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHH---
Confidence 999999999999999999999877 43321 111 11222334568999999 89999999999998888763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchh
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.....+...+++++.++...++. .+++.++.++..+..++.+.+.+.+. +.....+..+.++|+.+.....
T Consensus 263 ~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~------ 334 (393)
T PRK05764 263 LQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLG------ 334 (393)
T ss_pred HHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccc------
Confidence 22223446678888887777651 22333334443333344444444444 3322223334566666532110
Q ss_pred cccccHHHHHHHHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 314 KKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.......++...|+ ++||.+.++.. .++|+++..+++++++++++|.+++.+
T Consensus 335 --~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 335 --KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred --cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 00012467888776 47999998743 346778888999999999999998864
No 137
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=1e-26 Score=213.92 Aligned_cols=326 Identities=14% Similarity=0.035 Sum_probs=202.6
Q ss_pred CcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+++++.+++...... +.+.....++++++++++. +++++++|+|+++++..++.... .++|.|++.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vlv~ 126 (409)
T PLN02656 49 TTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA--RPGANILLP 126 (409)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh--CCCCeEEEe
Confidence 4567888888877763322 3344556677777777652 46899999999999999987653 467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+++|.... ......|..+...+.....+.. -|++++++.++. +...+++++| +|++|.+.+.+
T Consensus 127 ~p~y~~~~-~~~~~~g~~~~~i~~~~~~~~~------------~d~~~l~~~~~~--~~~~v~l~~P-~NPtG~~~s~~- 189 (409)
T PLN02656 127 RPGFPIYE-LCAAFRHLEVRYVDLLPEKGWE------------VDLDAVEALADQ--NTVALVIINP-GNPCGNVYSYQ- 189 (409)
T ss_pred CCCCCcHH-HHHHHcCCEEEEEeCCCcCCCC------------CCHHHHHHHhcc--CceEEEEECC-CCCCCCCCCHH-
Confidence 98886543 2233334333222111111110 178999888863 2444555555 45566665544
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc---cccCCCcchhhhhhhcc-CCccceeeeeh--------HHHHH
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EYFGVTPDLTTLGKIIG-GGLPVGAYGGR--------RDIME 227 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~---~~~~~~~di~s~sK~~~-~G~~iG~v~~~--------~~~~~ 227 (368)
.+++|+++|++||+++|+||+|.++ ..+.. ... +.......+.||||.|+ +|+|+||++++ +++++
T Consensus 190 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~ 269 (409)
T PLN02656 190 HLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVE 269 (409)
T ss_pred HHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHH
Confidence 4999999999999999999999987 54422 111 11122334679999977 89999999883 56777
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce--EEeeccceEEEEeecC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEG 305 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 305 (368)
.+.... . ...+.+.+++.++..+++.. .+.+.++.++..+..++.+.+.+...+... ..+..+.++|+.+...
T Consensus 270 ~~~~~~---~-~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~ 344 (409)
T PLN02656 270 RIKKYF---D-ILGGPATFIQAAVPTILEQT-DESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLS 344 (409)
T ss_pred HHHHHH---h-hhcCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchh
Confidence 665211 1 12346788888887777521 122333333333333444444444433211 1234456777776321
Q ss_pred CCcccchhcccccHHHHH-HHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFAR-FYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. ....+..+ +.+.|.++||.+.|+.. +++|+++..+++++++++++|++++.+
T Consensus 345 ~~--------~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 345 LL--------EDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLR 403 (409)
T ss_pred hc--------CCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 00 00011234 44667788999999742 356778888999999999999998754
No 138
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=4.5e-27 Score=216.21 Aligned_cols=327 Identities=14% Similarity=0.050 Sum_probs=208.0
Q ss_pred CcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+++++.+.+...... +.+.....+|+++++++++ +.+++++|+|+++++..++..+. .+++.|++..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~v~i~~ 126 (401)
T TIGR01264 49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALA--NAGQNILVPR 126 (401)
T ss_pred CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhC--CCCCEEEEeC
Confidence 4567888888877653222 3355566778888888774 46789999999999999997663 4678899999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|..... .....|..+............ -|++++++.++. +++++++...+|++|.+++ .+.
T Consensus 127 P~y~~~~~-~~~~~g~~v~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~~~~p~NPtG~~~~-~~~ 189 (401)
T TIGR01264 127 PGFPLYET-LAESMGIEVKLYNLLPDKSWE------------IDLKQLESLIDE---KTAALIVNNPSNPCGSVFS-RQH 189 (401)
T ss_pred CCChhHHH-HHHHcCCEEEEeecCCccCCC------------CCHHHHHHHhcc---CceEEEEcCCCCCCCCCCC-HHH
Confidence 88876543 333334433222111111110 178999988863 4455555444555666555 444
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc-C--CCcchhhhhhhcc-CCccceeeeehH------HHHHHhc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-G--VTPDLTTLGKIIG-GGLPVGAYGGRR------DIMEMVA 230 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~-~--~~~di~s~sK~~~-~G~~iG~v~~~~------~~~~~~~ 230 (368)
+++|+++|+++|+++|+||+|.+| ..+.. .....+ . ....+.||||.++ +|+|+||+++++ ++++.+.
T Consensus 190 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~ 269 (401)
T TIGR01264 190 LEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLV 269 (401)
T ss_pred HHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHH
Confidence 999999999999999999999988 54421 111111 1 1233569999987 899999998763 3444433
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
. ... ..++.+.+++.++...++.. .+++.++.++..+..++.+.+.+... +.....+..|.++|+.+.....
T Consensus 270 ~---~~~-~~~~~~~~~q~a~~~~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~-- 342 (401)
T TIGR01264 270 K---LSQ-RILGPCTIVQGALPSILLRT-PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHF-- 342 (401)
T ss_pred H---Hhh-ccCCCCcHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEeccccc--
Confidence 1 111 23456778888877777521 13444444444444444555544444 3322345567788887642100
Q ss_pred cchhcccccHHHHHHHHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 310 FEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++.....++++.|+ ++||.+.++.. .++|+++..+++++++++++|.+.+.++
T Consensus 343 ------~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 343 ------PEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred ------CCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 01112467888876 68999998742 3456777778999999999999988753
No 139
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=212.53 Aligned_cols=321 Identities=17% Similarity=0.110 Sum_probs=200.1
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhh----CC---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISA----VP---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+.+++.+.+......+.+.....++++.++++ ++ .++ ++++|+|+++|+..++... ..++|.|++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~--~~~gd~vli~~ 116 (387)
T PRK07777 39 PPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGL--VEPGDEVLLIE 116 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh--cCCCCEEEEeC
Confidence 45677877776654322233334456667766664 44 233 7999999999999888655 34678899999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+.|+... ......+......++... .++. .|++++++.++ ++++++++++.+|++|.+++ .+
T Consensus 117 p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~-~~ 179 (387)
T PRK07777 117 PYYDSYA-AVIAMAGAHRVPVPLVPDGRGFA------------LDLDALRAAVT---PRTRALIVNSPHNPTGTVLT-AA 179 (387)
T ss_pred CCchhhH-HHHHHCCCEEEEeecCCccCCCc------------CCHHHHHHhcC---cccEEEEEcCCCCCCCccCC-HH
Confidence 8887754 333333433222111111 0110 17899998886 35677777666666776664 45
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
.+++|+++|++|++++|+||+|.++ ..+. ...... .+....+.||||.|+ +|+|+||+++++++++.+..
T Consensus 180 ~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~--- 256 (387)
T PRK07777 180 ELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRA--- 256 (387)
T ss_pred HHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHH---
Confidence 5999999999999999999999877 4332 111211 112233568999999 89999999999988887763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....++..+.+.+.++..+++. .+.+.+.+++..+..++.+.+.+...+.....+..+.++|+.+...
T Consensus 257 ~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~--------- 325 (387)
T PRK07777 257 AKQYLTYVGGAPFQPAVAHALDH--EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPL--------- 325 (387)
T ss_pred HHhhcccCCCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEeccccc---------
Confidence 12223445566666665555542 1333333333333333334333333343322333455666665310
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCCC---------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQF---------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~~---------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...++.++++.|+ ++||.+.|+.. ..+|+++..+++++++++++|+++..
T Consensus 326 --~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 326 --GYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 0113578999997 57999988731 23677777889999999999998754
No 140
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.4e-27 Score=214.12 Aligned_cols=309 Identities=13% Similarity=0.072 Sum_probs=207.1
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+++| .+|.+++++.+.+... .+++.....+++++++++++ +++++++|+|+++++..+++... .+++.|++..+
T Consensus 39 ~~~~-~~~~v~~a~~~~~~~~--~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~--~~gd~v~~~~p 113 (359)
T PRK03158 39 NPYG-PSPKVKEAIAAHLDEL--ALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL--NPGTNTVMAEP 113 (359)
T ss_pred CCCC-CCHHHHHHHHHHHHHh--hcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh--CCCCEEEEcCC
Confidence 3455 5788999998877652 23456678899999999997 67899999999999988876552 46789999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|+.....+ ...|.++...... ++. .|++++++.++ +++++++++..+|++|.+.+.++ +
T Consensus 114 ~y~~~~~~~-~~~g~~~~~~~~~--~~~-------------~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~-l 173 (359)
T PRK03158 114 TFSQYRHNA-IIEGAEVREVPLK--DGG-------------HDLEAMLKAID---EQTKIVWICNPNNPTGTYVNHEE-L 173 (359)
T ss_pred CHHHHHHHH-HHcCCeEEEEecC--CCC-------------cCHHHHHHhcC---CCCCEEEEeCCCCCCCCCCCHHH-H
Confidence 998754332 2333333221111 111 17888888775 35566665555666787777333 5
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hccc-Ccc---ccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAY-GGA---QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~---~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
.++++.|+ +|+++|+||+|.++ ..+. ... .+..+...-+.||||.++ +|+|+||+++++++++.+....
T Consensus 174 ~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~---- 248 (359)
T PRK03158 174 LSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIAR---- 248 (359)
T ss_pred HHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhc----
Confidence 55555543 69999999999887 4322 111 112222333469999999 8999999999999888876422
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+++.+.+++.++.++++ ++++.+++.+..+..++.+.+.+.+.+.. ..++.+.++|+.+.
T Consensus 249 -~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~g~~i~~~~~-------------- 309 (359)
T PRK03158 249 -PPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLF-YYPSQTNFIFVDTG-------------- 309 (359)
T ss_pred -CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCe-eCCCcCcEEEEECC--------------
Confidence 245778999999888775 33455555444444455555555444432 23455677777652
Q ss_pred cHHHHHHHHHHHHcCeeecCCC----CCccccccCCCHHHHHHHHHHHHHH
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
.+..++++.|+++||.+.++. ..++|+++. +.+++++++++|+++
T Consensus 310 -~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 -RDANELFEALLKKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 124788999999999999973 223455533 789999999999886
No 141
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=8.7e-27 Score=214.26 Aligned_cols=326 Identities=13% Similarity=0.048 Sum_probs=199.1
Q ss_pred CcHHHHHHHHHHHHcCC-CCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|.+++++.+.+.... ..+.+.....+|++.+++++ + .++++++|+|+++++..+++.+. .+++.|++.
T Consensus 50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~--~~gd~v~v~ 127 (409)
T PLN00143 50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA--RPEANILLP 127 (409)
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc--CCCCEEEEc
Confidence 45568888988877532 22335555667777777765 2 46899999999999999997663 567899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|+...... ...|..+........+++. -|+++++++++. +...+++++| +|++|.+++ .+
T Consensus 128 ~P~y~~~~~~~-~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~~~~~~~nP-~NPTG~~~s-~~ 190 (409)
T PLN00143 128 RPGFPDVETYA-IFHHLEIRHFDLLPEKGWE------------VDLDAVEAIADE--NTIAMVIINP-GNPCGSVYS-YE 190 (409)
T ss_pred CCCCcCHHHHH-HHcCCEEEEEeccCCCCCc------------CCHHHHHHhccc--CCEEEEEECC-CCCCCCccC-HH
Confidence 99988764333 3333333221111111110 178999988763 2455666666 445566555 44
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccC---CCcchhhhhhhcc-CCccceeeeeh--HHHH------H
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGGR--RDIM------E 227 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~~--~~~~------~ 227 (368)
.+++|+++|++|++++|+||+|.++ ..+.. .....+. ....+.||||.|+ +|+|+||++++ +.+. +
T Consensus 191 ~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~ 270 (409)
T PLN00143 191 HLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIAD 270 (409)
T ss_pred HHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHH
Confidence 4999999999999999999999987 54332 1111111 2234569999988 89999999883 3332 2
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce--EEeeccceEEEEeecC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEG 305 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 305 (368)
.+.. ...... ..+.+++.++.++++.. .+++.++..+..+..++.+.+.+.+.+... ..+..+.++|+.+...
T Consensus 271 ~~~~---~~~~~~-~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~ 345 (409)
T PLN00143 271 SIKK---ALNPAP-FPPTFIQAAIPEILEKT-TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLL 345 (409)
T ss_pred HHHH---HHhccC-CCCchHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchh
Confidence 2221 111122 23667777777666411 122333333333333333434333333221 2234577888877321
Q ss_pred CCcccchhcccccHHHHHHHH-HHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYR-GMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. +...+..+++. .+.++||.+.|+.. .++|+++..+++++++++++|++++.+
T Consensus 346 ~~--------~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 346 LL--------EDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred hc--------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 00 00112355654 44678999999742 356788888899999999999998854
No 142
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=1.4e-26 Score=212.40 Aligned_cols=329 Identities=14% Similarity=0.079 Sum_probs=205.8
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
++.+..++.+.+++.+.+.....+ +.+.....+|++.+++++ + .++ ++++|+|+++++..++..+ ..++
T Consensus 38 ~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~--~~~g 115 (395)
T PRK08175 38 NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLAT--LDHG 115 (395)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHh--CCCC
Confidence 344445566888887776543222 223344566666666653 3 345 7999999999999887655 3567
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+.|++..++|......+. ..|..+...+... .+ .+.++++++++...+++++++++..+|++|.
T Consensus 116 d~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~-~~--------------~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~ 179 (395)
T PRK08175 116 DTVLVPNPSYPIHIYGAV-IAGAQVRSVPLVE-GV--------------DFFNELERAIRESYPKPKMMILGFPSNPTAQ 179 (395)
T ss_pred CEEEEcCCCCcchHHHHH-HcCCeEEEEeccc-CC--------------CcHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence 899999998887654443 3333222111110 11 1478888888754346777777644555666
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHH
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~ 228 (368)
+.+ .+.+++|+++|++||+++|+||+|.++ ..+.. ..... .+....+.||||.|+ +|+|+||+++++++++.
T Consensus 180 ~~~-~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~ 258 (395)
T PRK08175 180 CVE-LEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSA 258 (395)
T ss_pred CCC-HHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHH
Confidence 555 444999999999999999999999887 43321 11111 122233568999997 89999999999999887
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCc
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 308 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
+... .....++.+.+++.++..+++. .+.+.+++++..+..++.+.+.+...+.....+..+.++|+.+....
T Consensus 259 ~~~~---~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~-- 331 (395)
T PRK08175 259 LARI---KSYHDYGTFTPLQVAAIAALEG--DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPY-- 331 (395)
T ss_pred HHHH---HhhcccCCCcHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCccc--
Confidence 7632 1223445566677776666642 12233333333333334444444444443233445778888774211
Q ss_pred ccchhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 309 NFEDAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......+++..|+ ++||.+.++.. .++|+++..+++.+.+++++|++++.+
T Consensus 332 --------~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 332 --------AAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred --------CCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 0112477887776 57999999732 246677667899999999999998865
No 143
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=9.1e-27 Score=214.59 Aligned_cols=324 Identities=14% Similarity=0.048 Sum_probs=205.0
Q ss_pred cHHHHHHHHHHHHcCCCCCCC-ChhHHHHHHHHHhhCC-------------CCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 11 YLQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAVP-------------SIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~-------------~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
++.+++++.+.+.......|+ .....+|++.++++++ +++++++|+|+++++..++.++. .+++
T Consensus 52 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~--~~gd 129 (412)
T PTZ00433 52 PAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC--DEGD 129 (412)
T ss_pred CHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc--CCCC
Confidence 456888887776642222233 3346677777777652 36899999999999999997663 4678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
.|++..++|...... ....|..+........ .... |++++++.++. +++++++...+|++|.
T Consensus 130 ~vlv~~P~y~~~~~~-~~~~g~~~~~i~~~~~~~~~~-------------d~~~l~~~~~~---~~~~i~~~~p~NPtG~ 192 (412)
T PTZ00433 130 NILVPAPGFPHYETV-CKAYGIEMRFYNCRPEKDWEA-------------DLDEIRRLVDD---RTKALIMTNPSNPCGS 192 (412)
T ss_pred EEEEccCCcccHHHH-HHHcCCEEEEEecCccccCcC-------------CHHHHHHHhcc---CceEEEEeCCCCCCCc
Confidence 899999988876433 3333433322222111 1111 78999888863 4565555444555676
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccC---CCcchhhhhhhcc-CCccceeeee------hH
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGG------RR 223 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~------~~ 223 (368)
+++.++ +++|+++|++||+++|+||+|.+| ..+.. .....+. ...-+.||||.++ +|+|+||+++ .+
T Consensus 193 ~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~ 271 (412)
T PTZ00433 193 NFSRKH-VEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGG 271 (412)
T ss_pred ccCHHH-HHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHH
Confidence 665555 999999999999999999999887 44322 1111111 1223568999997 8999999986 24
Q ss_pred HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEe
Q 017633 224 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFF 302 (368)
Q Consensus 224 ~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 302 (368)
++++.+... ....++.+.+++.++.+++..- .+.+.++.++..+..++.+.+.+... +.....+..+.++|+.+
T Consensus 272 ~~~~~~~~~----~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l 346 (412)
T PTZ00433 272 DFLDGMKRL----GMLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRL 346 (412)
T ss_pred HHHHHHHHH----hhccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEe
Confidence 566665521 1123467888888877776521 12344444444444444454444433 33223344566778776
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..... +...+..++++.|++ +||.+.++.. .++|+++...++++++++++|.+++..
T Consensus 347 ~~~~~--------~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 347 DLEKF--------RDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCER 408 (412)
T ss_pred chhhc--------CCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 32100 000124688999884 7999999753 346777778899999999999998864
No 144
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.4e-26 Score=207.51 Aligned_cols=307 Identities=16% Similarity=0.129 Sum_probs=202.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.++.+++++.+.+.......++.+...++++.++++++ .++++++++|+++++..++... ..++|.|++.+++|...
T Consensus 36 ~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l--~~~gd~Vlv~~p~y~~~ 113 (351)
T PRK14807 36 LPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF--INKGDVVIYPHPSFAMY 113 (351)
T ss_pred CCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh--cCCCCEEEEeCCChHHH
Confidence 56789999988776432233444557899999999987 6789999999999999888765 35678999999988754
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
. ......|.++.........++ |++++++.++.. ++++++++..+|++|.+.+ .+++.+
T Consensus 114 ~-~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~~~--~~k~v~l~~p~NPtG~~~~----~~~l~~ 172 (351)
T PRK14807 114 S-VYSKIAGAVEIPVKLKEDYTY--------------DVGSFIKVIEKY--QPKLVFLCNPNNPTGSVIE----REDIIK 172 (351)
T ss_pred H-HHHHHcCCeEEEeecCCCCCC--------------CHHHHHHHhhcc--CCCEEEEeCCCCCCCCCCC----HHHHHH
Confidence 3 333334443332221111111 789999988742 5676666666666788888 778888
Q ss_pred HHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHH
Q 017633 169 ITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 246 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~ 246 (368)
+|++++.++|+||+|.++..... ...+..+....+.||||.++ +|+|+||+++++++++.+.... ..+..+.+
T Consensus 173 l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~-----~~~~~~~~ 247 (351)
T PRK14807 173 IIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVK-----SPYNINSL 247 (351)
T ss_pred HHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHcc-----CCCCcCHH
Confidence 88888889999999987721111 11122223344679999998 9999999999999988887422 23456788
Q ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 247 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 247 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
++.++...++.-.-++..+.+.++++.+.+.|++. .+.. ..+..++++|+.+. +..++++
T Consensus 248 ~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~---~g~~-~~~~~~~~~~i~~~----------------~~~~~~~ 307 (351)
T PRK14807 248 SQVIALKVLRTGVLKERVNYILNERERLIKELSKI---PGIK-VYPSKTNFILVKFK----------------DADYVYQ 307 (351)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC---CCcE-ECcCCccEEEEEcC----------------CHHHHHH
Confidence 88887777652100122333444444444444321 1322 23445667776552 1367889
Q ss_pred HHHHcCeeecCCCC-----CccccccCCCHHHHHHHHHHHHHHH
Q 017633 327 GMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 327 ~l~~~Gi~~~~~~~-----~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.|+++||.+.+++. ..+|+++. +.++.+++++.|++++
T Consensus 308 ~l~~~gV~v~~~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 308 GLLERGILVRDFSKVEGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred HHHHCCEEEEECCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 99999999977532 23556544 5678899999998764
No 145
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=4.2e-27 Score=215.24 Aligned_cols=318 Identities=16% Similarity=0.101 Sum_probs=200.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCC----hhHHHHHHHHHhhCC---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPC----LLENVLAEMVISAVP---SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+.+++.+.+......+.+. +....+++++.+.++ +. +++++|+|+++++..++... ..+++.|++.
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~--~~~gd~Vli~ 121 (386)
T PRK09082 44 GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL--VRPGDEVIVF 121 (386)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH--cCCCCEEEEe
Confidence 35678888888776532222222 344455555555544 23 37999999999999999765 2467889998
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|...... ....|..+............ |++++++.++ ++++++++++.+|++|.+.++++
T Consensus 122 ~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~-------------d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~ 184 (386)
T PRK09082 122 DPSYDSYAPA-IELAGGRAVRVALQPPDFRV-------------DWQRFAAAIS---PRTRLIILNTPHNPSGTVWSAAD 184 (386)
T ss_pred CCCchhhHHH-HHHcCCEEEEEecCcccccC-------------CHHHHHHhcC---ccceEEEEeCCCCCCCcCCCHHH
Confidence 8887765333 33334433222211111111 7899998886 35666666655566776665554
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccc-cccC---CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQ-EYFG---VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~-~~~~---~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|.++|++||+++|+||+|.++ ..+. .... ...+ ....+.||||.++ +|+|+||+++++++++.+..
T Consensus 185 -~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~--- 260 (386)
T PRK09082 185 -MRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRK--- 260 (386)
T ss_pred -HHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHH---
Confidence 999999999999999999999877 4332 1111 1111 2233568999998 89999999999999888763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
......++.+.+++.++...++. .+.+.+++++..+..++.+.+.+.+.+.....+..+.++|+.+...
T Consensus 261 ~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~--------- 329 (386)
T PRK09082 261 VHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAI--------- 329 (386)
T ss_pred HHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEecccc---------
Confidence 22334556788888776655542 2333444433333333444444433443323334455677776310
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCCC--------CccccccCCCHHHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQF--------EAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~~--------~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
...+..++++.|+ ++||.+.|+.. .++|+++..+++++++++++|++
T Consensus 330 --~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 330 --SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 1123478888874 67999988741 24677777889999999999875
No 146
>PRK06855 aminotransferase; Validated
Probab=99.96 E-value=4.1e-27 Score=217.73 Aligned_cols=336 Identities=15% Similarity=0.111 Sum_probs=195.9
Q ss_pred CcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+++++.+.+.+...+ +.+.....+|++.+++++ + ++++|++|+|+++++..++.+ ..++|.|++.
T Consensus 49 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l---~~~Gd~Vlv~ 125 (433)
T PRK06855 49 IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGL---LRREARVIGP 125 (433)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHh---cCCCCeEEEe
Confidence 3456777888776543222 334455667777777764 2 468999999999999888753 3568899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|+++........+......+.....++. -|+++|++.++++++...+++++| +|++|.+++ .+
T Consensus 126 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~------------~d~~~l~~~~~~~~~~~~i~l~~P-~NPTG~~~s-~~ 191 (433)
T PRK06855 126 SPAYSTHSSAEAAHAGYPPVTYRLDPENNWY------------PDLDDLENKVKYNPSIAGILLINP-DNPTGAVYP-KE 191 (433)
T ss_pred CCCCchHHHHHHHhcCCeEEEEecccccCCC------------CCHHHHHHHHhcCCCceEEEEECC-CCCCCcCCC-HH
Confidence 9999985432222223322211111111110 189999999975422334455555 444565555 55
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc--C-CCcchhhhhhhcc-CCccceeeeeh-----H---HHHH
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF--G-VTPDLTTLGKIIG-GGLPVGAYGGR-----R---DIME 227 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~--~-~~~di~s~sK~~~-~G~~iG~v~~~-----~---~~~~ 227 (368)
.+++|+++|++||+++|+||+|.++ +.+.. ...... + ....+.||||.++ +|||+||++++ + ++++
T Consensus 192 ~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~ 271 (433)
T PRK06855 192 ILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYIN 271 (433)
T ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHH
Confidence 5999999999999999999999888 54421 111111 1 1234579999998 99999999862 2 2333
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.+.. ... ...+++.+++.++.++++.-.-+.+.++.++..+..++.+.+.+... +.....+..+.++|+.+....
T Consensus 272 ~~~~---~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~ 347 (433)
T PRK06855 272 SILN---AKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGV 347 (433)
T ss_pred HHHH---hhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccccc
Confidence 3321 111 23356778888877666411001233333333333333343434333 222233445667788774311
Q ss_pred Ccc-----cc----------hhcccccHHHHHHHHH-HHHcCeeecCCCCC-----ccccccC-CCHHHHHHHHHHHHHH
Q 017633 307 VYN-----FE----------DAKKSETTKFARFYRG-MLEEGVYFAPSQFE-----AGFTSLA-HSSDDIQHTITAAEKV 364 (368)
Q Consensus 307 ~~~-----~~----------~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~~~-----~~~~~~~-~~~~~i~~~~~~l~~~ 364 (368)
... +. +...+ ..+..+++.. +.++||.+.|+..+ .+|+++. .+++++++++++|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~ 426 (433)
T PRK06855 348 LNNKQSLPIENPEVKEYVEGLVKGP-VSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEK 426 (433)
T ss_pred ccccccCCcchhhhHHHHHHHHhcC-CCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHH
Confidence 000 00 00000 0023566655 45779999998422 3567666 4999999999999998
Q ss_pred Hhh
Q 017633 365 LRQ 367 (368)
Q Consensus 365 l~~ 367 (368)
+.+
T Consensus 427 ~~~ 429 (433)
T PRK06855 427 IEE 429 (433)
T ss_pred HHH
Confidence 864
No 147
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.96 E-value=1.3e-26 Score=212.50 Aligned_cols=309 Identities=14% Similarity=0.067 Sum_probs=195.2
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C-----CC-CeEEEeCChHHHHHHHHHHHHHhcCCce--
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P-----SI-EMVRFVNSGTEACMGVLRLARAFTGRER-- 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~-----~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~-- 77 (368)
.++.+++++.+.+.....| .+.....+|++.+++++ + +. +++++|+|+++++..++++.. .+++.
T Consensus 42 ~~~~~~~a~~~~~~~~~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~--~~gd~~~ 118 (393)
T TIGR03538 42 TPAFVLEALRENLHGLSTY-PTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI--NPGQAPL 118 (393)
T ss_pred CCHHHHHHHHHHhhccCCC-CCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc--CCCCcce
Confidence 4667889888876543333 23344566666666654 2 34 479999999999999987663 34443
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
|++..++|.+.... ....|.++.........++. .|++++++.+.+ +++++++...+|++|.++
T Consensus 119 vlv~~P~y~~~~~~-~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~---~~k~i~l~~p~NPtG~~~ 182 (393)
T TIGR03538 119 VVMPNPFYQIYEGA-ALLAGAEPYFLNCTAENGFL------------PDFDAVPESVWR---RCQLLFVCSPGNPTGAVL 182 (393)
T ss_pred EEecCCCCcchHHH-HHhcCCeEEEeeccccCCCC------------CCHHHHHHHHhh---cceEEEEeCCCCCcCccc
Confidence 77778888765433 33334433222221111111 178899888863 566666554455566655
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc--Ccc----ccccC-----CCcchhhhhhhcc-CCccceeeeehHH
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA----QEYFG-----VTPDLTTLGKIIG-GGLPVGAYGGRRD 224 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~----~~~~~-----~~~di~s~sK~~~-~G~~iG~v~~~~~ 224 (368)
+ .+.+++|+++|++||++||+||+|.++ ..+. ... ....+ ....+.||||.++ +|+|+||++++++
T Consensus 183 s-~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~ 261 (393)
T TIGR03538 183 S-LDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAE 261 (393)
T ss_pred C-HHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHH
Confidence 5 555999999999999999999999887 4321 111 11111 1233569999987 8999999999998
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH----HHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
+++.+.. .....+++.+.+.+.++.+++. .+++. +.++++++.+.+.|++. .....+..+.++|+
T Consensus 262 l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~gg~f~~~ 330 (393)
T TIGR03538 262 ILKAFLR---YRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEILGQV-----LDLELPDAGFYLWP 330 (393)
T ss_pred HHHHHHH---HHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHHHHhh-----CcccCCCeeEEEEE
Confidence 8887763 2222344667788877766653 23333 33444444444444332 12233455777788
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC------------CccccccCCCHHHHHHHHHHHHHH
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF------------EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------------~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
.+. .+..++++.|+ ++||.+.|+.. .++|+++..+++++++++++|++.
T Consensus 331 ~~~---------------~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 331 KVP---------------GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred ECC---------------CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 762 11367888886 57999988742 235677777899999999999875
No 148
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.6e-26 Score=210.40 Aligned_cols=309 Identities=16% Similarity=0.070 Sum_probs=199.4
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+++ .+|.+++++.+. ... ..++.....+|+++++++++ ++++|++++|+++++..++... ..+++.|++.++.
T Consensus 63 p~~-~~~~v~~a~~~~-~~~--~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~--~~~gd~Vlv~~P~ 136 (380)
T PLN03026 63 PYG-PPPEVLEALGNM-KFP--YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV--LDPGDKIIDCPPT 136 (380)
T ss_pred CCC-CCHHHHHHHHhh-Hhh--ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh--cCCCCEEEEcCCC
Confidence 444 566788887642 221 22345557899999999998 7889999999999999888765 2467889999988
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|..+.. .....|.++........... |++++++.+.. ++++++++++.+|++|.+.+ .+
T Consensus 137 y~~y~~-~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~~--~~~~~v~l~~P~NPTG~~~~----~~ 195 (380)
T PLN03026 137 FGMYVF-DAAVNGAEVIKVPRTPDFSL--------------DVPRIVEAVET--HKPKLLFLTSPNNPDGSIIS----DD 195 (380)
T ss_pred hHHHHH-HHHHcCCEEEEeecCCCCCc--------------CHHHHHHHHhc--cCCcEEEEeCCCCCCCCCCC----HH
Confidence 864332 22333433322111110111 78999988842 35676666666677788777 56
Q ss_pred HHHHHHHHhCCEEEEehhhhch-hcccCcc-ccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccC
Q 017633 165 AIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 241 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~ 241 (368)
++.++++.. +++|+||+|.+| ..+.... .+..+...-+.||||.++ +|+|+||+++++++++.+.... ..+
T Consensus 196 ~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~-----~~~ 269 (380)
T PLN03026 196 DLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-----QPY 269 (380)
T ss_pred HHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhc-----CCC
Confidence 666666544 899999999887 4332111 111222233569999999 9999999999999988876422 235
Q ss_pred CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 242 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 242 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
+.+.+++.++.++++ +.++.++.++.....++.+.+.+...+.....+..++++|+.+. ...+.
T Consensus 270 ~~~~~~q~aa~~aL~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~-------------~~~~~ 333 (380)
T PLN03026 270 NVSVAAEVAACAALS---NPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVT-------------SGRDA 333 (380)
T ss_pred CCCHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECC-------------CCCCH
Confidence 678888888887775 22333343333333344444444444432234456777777652 11235
Q ss_pred HHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHH
Q 017633 322 ARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
.++++.|+++||.++++.. .++|+++. +.+++++++++|+++
T Consensus 334 ~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 334 KKLKEDLAKMGVMVRHYNSKELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHHHCCeEEEECCCCCCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 7899999999999988642 23456544 667888999888764
No 149
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-26 Score=210.97 Aligned_cols=330 Identities=11% Similarity=0.026 Sum_probs=203.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCh----hHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCL----LENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+.+++.+.+......+.+.. +.+++++.+.+.++ .++++++|+|+++|+..++... ..+++.|++.+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~--~~~gd~vl~~~ 124 (402)
T PRK06107 47 TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT--LEAGDEVIIPA 124 (402)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh--cCCCCEEEEec
Confidence 356788888888765332223333 44445555554444 4678999999999999998654 35678899988
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
+.|.++..... ..+........+...++. -|++++++.++ ++++++++...+|++|.+.+ .+.
T Consensus 125 p~y~~y~~~~~-~~~~~~~~v~~~~~~~~~------------~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s-~~~ 187 (402)
T PRK06107 125 PYWVSYPDMVL-ANDGTPVIVACPEEQGFK------------LTPEALEAAIT---PRTRWLILNAPSNPTGAVYS-RAE 187 (402)
T ss_pred CCCcCHHHHHH-HcCCEEEEecCCcccCCC------------CCHHHHHhhcC---cCceEEEEECCCCCCCcCcC-HHH
Confidence 87776643333 333222111111111110 16889988886 34555544444455665555 444
Q ss_pred HHHHHHHHHHh-CCEEEEehhhhch-hcccC-cccccc-----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 163 LNAIRRITKEN-GALLIFDEVMTGF-RLAYG-GAQEYF-----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 163 l~~i~~l~~~~-~~~li~De~~~~~-~~g~~-~~~~~~-----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+++++++|++| ++++|+||+|.++ ..+.. ...... +....+.||||.|+ +|+|+||+++++++++.+..
T Consensus 188 ~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~-- 265 (402)
T PRK06107 188 LRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINK-- 265 (402)
T ss_pred HHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHH--
Confidence 99999999998 9999999999876 43321 111111 12233568999998 89999999999999888773
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccch
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
.....+++++.+++.++..+++. .+.+.++.++..+..++.+.+.+.+. +.....+..+.++|+.+......
T Consensus 266 -~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~---- 338 (402)
T PRK06107 266 -LQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGK---- 338 (402)
T ss_pred -HHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeeccccccc----
Confidence 23334557788888888777741 13344443333333344444444333 32222334566677766321000
Q ss_pred hccccc---HHHHHHHHHH-HHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 313 AKKSET---TKFARFYRGM-LEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 313 ~~~~~~---~~~~~~~~~l-~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..+.. .+..+++..| .++||.+.++.. +++|+++..+++++++++++|++.++++
T Consensus 339 -~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 339 -TTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred -ccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 00011 1345677655 467999999843 3467888889999999999999998764
No 150
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=2.6e-26 Score=210.33 Aligned_cols=325 Identities=14% Similarity=0.082 Sum_probs=199.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|.+.+++.+.+......+.+.....+|++.+++++ + .++++++|+|+++|+..++... ..++|.|++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vlv~~ 121 (388)
T PRK07337 44 APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLAL--VERGDEVLMPD 121 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHh--cCCCCEEEEeC
Confidence 3567888888877643222223344566777777764 3 4688999999999999888765 35678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|........ ..+..+...+.....++. -|++++++.++ ++++++++...+|++|.+++.+ .
T Consensus 122 p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~------------~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~-~ 184 (388)
T PRK07337 122 PSYPCNRHFVA-AAEGRPVLVPSGPAERFQ------------LTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPD-E 184 (388)
T ss_pred CCchhhHHHHH-HcCCEEEEeecCCccCCc------------CCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHH-H
Confidence 99987654333 333333222111111110 17899998886 3455555444445566656544 4
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccC-CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG-VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~-~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~ 239 (368)
+++|+++|++|++++|+||+|.++ ..+.......++ ....+.||||.++ +|+|+||+++++++++.+.. .....
T Consensus 185 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~---~~~~~ 261 (388)
T PRK07337 185 LRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEK---LAQNL 261 (388)
T ss_pred HHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHH---HHHHh
Confidence 999999999999999999999877 433221111111 1122458999998 89999999999888887763 11222
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhccccc
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
..+.+.+++.++..+++.- .....++.++..+..++.+.+.+.+.+... ..+..+.++|+++....- ++.
T Consensus 262 ~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~--------~~~ 332 (388)
T PRK07337 262 FICASALAQHAALACFEPD-TLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAH--------PAA 332 (388)
T ss_pred ccCCChHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccC--------CCC
Confidence 3356778888877666410 011122222222223333333333334322 234557788888742100 011
Q ss_pred HHHHHHHHHHH-HcCeeecCCCC-------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 319 TKFARFYRGML-EEGVYFAPSQF-------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 319 ~~~~~~~~~l~-~~Gi~~~~~~~-------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+..+++..|+ ++||.+.|+.. .++|+++..+++++.+++++|.+++
T Consensus 333 ~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 333 GDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 23467887754 67999988631 3456777778999999999998865
No 151
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.9e-26 Score=209.93 Aligned_cols=314 Identities=15% Similarity=0.146 Sum_probs=206.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+++| .+|.+++++.+.+.....| +.....++++.++++++ +++++++++|+++++..++... ..+++.|++..+
T Consensus 42 ~~~~-~~~~~~~a~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l--~~~gd~vl~~~p 116 (367)
T PRK02731 42 NPLG-PSPKAIEAIRAAADELHRY--PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAY--LGPGDEVIYSEH 116 (367)
T ss_pred CCCC-CCHHHHHHHHHHHHhhcCC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh--cCCCCEEEEecC
Confidence 4566 4778999998887653333 44445789999999997 6789999999898888777655 346788999988
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|...... ....|..+.. ++..... .|++++++.++ +++++++++..++++|.+.+.++ +
T Consensus 117 ~y~~~~~~-~~~~g~~~~~--~~~~~~~-------------~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~-l 176 (367)
T PRK02731 117 GFAVYPIA-AQAVGAKPVE--VPAKDYG-------------HDLDAMLAAVT---PRTRLVFIANPNNPTGTYLPAEE-V 176 (367)
T ss_pred CHHHHHHH-HHHcCCeEEE--ecccCCC-------------CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCCCHHH-H
Confidence 88654332 2333333322 1111111 17899998886 35666666666666787777322 5
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hccc-CccccccCCCcc---hhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~~~~d---i~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
+++++.|+ +|+++|+||+|.++ ..+. ..........++ +.||||.++ +|+|+||+++++++++.+....
T Consensus 177 ~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~---- 251 (367)
T PRK02731 177 ERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVR---- 251 (367)
T ss_pred HHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHcc----
Confidence 55555443 49999999999877 4322 111222222222 348999998 8999999999999888876422
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.++..+.+++.++.+.++ ++.+.++.++..+..++.+.+.+.+.+... .+..++++|+.+. .
T Consensus 252 -~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~g~~~~i~~~-------------~ 313 (367)
T PRK02731 252 -QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEY-IPSVGNFILVDFD-------------D 313 (367)
T ss_pred -CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-CCCCceEEEEECC-------------C
Confidence 234567788887766664 334445555555555555555555555432 2445778888762 2
Q ss_pred cHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|.++||.+.++.. ..+|+++. +.+++++++++|+++++.
T Consensus 314 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 314 GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 22357899999999999998743 24566654 678999999999998753
No 152
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.7e-26 Score=209.76 Aligned_cols=308 Identities=15% Similarity=0.048 Sum_probs=202.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEE-eCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~-~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++++ .+|.+++++.+.+.... .++.....++++.++++++ ..+++++ ++|+++++..+++.. ..+++.|++..
T Consensus 44 ~~~~-~~~~~~~~~~~~~~~~~--~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~--~~~gd~vlv~~ 118 (361)
T PRK00950 44 NPLG-PSPKAVEAIEKELSKIH--RYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTF--IDPGDEVIIPT 118 (361)
T ss_pred CCCC-CCHHHHHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHh--cCCCCEEEEcC
Confidence 3455 57788999888776532 3344456899999999997 6788988 566667777777655 34677899888
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|..... .....|..+...... ..+.. |++++++.++ ++++++++...++++|.+.+
T Consensus 119 p~y~~~~~-~~~~~g~~~~~~~~~-~~~~~-------------~~~~l~~~~~---~~~~~v~~~~p~nptG~~~~---- 176 (361)
T PRK00950 119 PTFSYYEI-SAKAHGAKPVYAKRE-EDFSL-------------DVDSVLNAIT---EKTKVIFLCTPNNPTGNLIP---- 176 (361)
T ss_pred CChHHHHH-HHHHcCCEEEEeecC-CCCCc-------------CHHHHHHHhc---cCCCEEEEeCCCCCCCCCcC----
Confidence 87765432 233334333221111 11111 7899998886 35666665555667788888
Q ss_pred HHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t 240 (368)
.+++.++|+++|+++|+||+|.+|..... ......+....+.||||.++ +|+|+||+++++++++.+.... ..
T Consensus 177 ~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~-----~~ 251 (361)
T PRK00950 177 EEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAK-----TP 251 (361)
T ss_pred HHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhc-----CC
Confidence 78899999999999999999987721111 11112222234569999999 8999999999999888776422 23
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
++.+.+++.++..+++ +.++.++..++.+..++.+.+.+. .. ..+..++++|+.+. ..+
T Consensus 252 ~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~-~~~~~~~~i~~~~~--------------~~~ 310 (361)
T PRK00950 252 FSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FK-VYPSEANFVLVDVT--------------PMT 310 (361)
T ss_pred CCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---ee-ECCCcceEEEEECC--------------CCC
Confidence 4567778777766664 334455555555555555544332 11 22344567777661 123
Q ss_pred HHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 321 FARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..++++.|.++||.+.++.. ..+|+++. +.+++++++++|+++++
T Consensus 311 ~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 311 AKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIVE 361 (361)
T ss_pred HHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHhC
Confidence 57899999999999987532 23566655 67899999999998763
No 153
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=2.4e-26 Score=208.00 Aligned_cols=313 Identities=15% Similarity=0.088 Sum_probs=197.6
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+++| .++.+++++.+.+..... ++.....++++.++++++ +++++++++|+++++..+++.+ .++ .+++..+
T Consensus 30 ~~~~-~p~~~~~a~~~~~~~~~~--y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l---~~g-~viv~~P 102 (356)
T PRK08056 30 NPLG-MPVSLKRAIIDNLDCAER--YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL---KPR-RAMIVTP 102 (356)
T ss_pred CCCC-CCHHHHHHHHHHHHhccc--CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh---CCC-CEEEeCC
Confidence 3444 677899999887765433 344457899999999997 7889999999999999888754 344 4677777
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|..+. ......|..+...+.....++. . | +++.+.++ ++++++++...+|++|.+ .+++.+
T Consensus 103 ~y~~~~-~~~~~~g~~~~~v~~~~~~~~~-----------~-~-~~~~~~~~---~~~k~v~l~~p~NPTG~~-~~~~~~ 164 (356)
T PRK08056 103 GFAEYR-RALQQVGCEIRRYSLREADGWQ-----------L-T-DAILEALT---PDLDCLFLCTPNNPTGLL-PERQLL 164 (356)
T ss_pred CcHHHH-HHHHHcCCeEEEEecccccCCC-----------c-c-HHHHHhcc---CCCCEEEEeCCcCCCCCC-CCHHHH
Confidence 776543 2333334433222221111110 0 3 34444454 356666654445556664 456669
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC--ccccccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCcccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~--~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~ 238 (368)
++|+++|++|++++|+||+|.+| ..+.. ...........+.||||.++ +|+|+||+++ ++++++.+... .
T Consensus 165 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~-----~ 239 (356)
T PRK08056 165 QAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ-----Q 239 (356)
T ss_pred HHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh-----C
Confidence 99999999999999999999887 43321 11122222334568999999 9999999987 46677766531 1
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccccc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
..++.+.+++.++..+++ ++.+.++.++..+..++.+.+.+...+.....+..++++|+.+. .
T Consensus 240 ~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~-------------~- 302 (356)
T PRK08056 240 MPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCE-------------R- 302 (356)
T ss_pred CCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcC-------------C-
Confidence 345667777777666653 33333343333344444444444333222223445677777652 1
Q ss_pred HHHHHHHHHHHHcCeeecCCCCC------ccccccCCCHHHHHHHHHHHHHHHh
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFE------AGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~------~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+..++++.|+++||.++++..+ ++|+++ .+.++.+.+++.|+++++
T Consensus 303 -~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~-~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 -PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI-RSAAENERLLAALRNVLT 354 (356)
T ss_pred -ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE-cCHHHHHHHHHHHHHHHc
Confidence 1367899999999999987432 344543 367899999999998764
No 154
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=1.3e-25 Score=209.46 Aligned_cols=319 Identities=19% Similarity=0.184 Sum_probs=210.4
Q ss_pred CCceeccCCC--cHHHHHHHHHHHHcCC------C-CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH
Q 017633 1 MPQLIILFPS--YLQVLAALGETMKKGT------S-FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 71 (368)
Q Consensus 1 ~~~~~~~g~~--~~~v~~a~~~~~~~~~------~-~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~ 71 (368)
+.+.|+||.+ ++...+++.+++.+.. . .+.+.+...++++.++++++..+.++++ +|+.++..++...
T Consensus 105 ~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~-~G~~an~~~i~al-- 181 (489)
T PLN02483 105 LGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFG-MGYATNSTIIPAL-- 181 (489)
T ss_pred eecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEEC-CHHHHHHHHHHHh--
Confidence 3578899996 4566677766666621 1 1235788999999999999866666665 5888887766554
Q ss_pred hcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-----C-----CCe
Q 017633 72 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-----K-----GEI 141 (368)
Q Consensus 72 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-----~-----~~~ 141 (368)
..++|.|++.+++|... ...+...| .++..++++|.+++++.+++. + .+.
T Consensus 182 ~~~Gd~Vi~d~~~h~s~-~~~~~~~G-------------------a~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k 241 (489)
T PLN02483 182 IGKGGLIISDSLNHNSI-VNGARGSG-------------------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
T ss_pred CCCCCEEEEcchhhHHH-HHHHHHcC-------------------CeEEEEeCCCHHHHHHHHHhhhhccccccccCCce
Confidence 35677777766555543 33333322 334555566788887776531 1 123
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCCCc---ch--hhhhhhccCC
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVTP---DL--TTLGKIIGGG 213 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~~~---di--~s~sK~~~~G 213 (368)
.++++++++++.|.+.+ +++|+++|++||++||+||+|+ +. ..|. +..+.+++.+ |+ .||||++++
T Consensus 242 ~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~-g~~~~~~v~~~~~dI~~~SfSKs~g~- 315 (489)
T PLN02483 242 IIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR-GVCELLGVDPADVDIMMGTFTKSFGS- 315 (489)
T ss_pred EEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCC-chHHhcCCCcccCcEEEEecchhccc-
Confidence 58888999999999888 9999999999999999999995 22 1222 2234444432 44 499999983
Q ss_pred ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC-------CHHHHHHHHHHHHHHHHHHHHHhcC
Q 017633 214 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-------GTYEYLNKITGELTQGIIDAGKKAG 286 (368)
Q Consensus 214 ~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~ 286 (368)
+.||+++++++++.+.........+ .+.++..++++.++++.+..+ +..++++++++++++.|++. +
T Consensus 316 -~GG~i~~~~~li~~l~~~~~~~~~~-~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~----G 389 (489)
T PLN02483 316 -CGGYIAGSKELIQYLKRTCPAHLYA-TSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM----G 389 (489)
T ss_pred -CceEEEcCHHHHHHHHHhCcccccc-CCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC----C
Confidence 3489999999998887422111112 134556666677788766421 23556777777777777764 3
Q ss_pred CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-------ccc--cccCCCHHHHHHH
Q 017633 287 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-------AGF--TSLAHSSDDIQHT 357 (368)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-------~~~--~~~~~~~~~i~~~ 357 (368)
+.......++.+++.+. .+....++++.|+++||.+.+.+.+ .+| ++..++++|++++
T Consensus 390 ~~v~~~~~sp~~~l~l~-------------~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~ 456 (489)
T PLN02483 390 FEVLGDNDSPVMPIMLY-------------NPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKA 456 (489)
T ss_pred CcccCCCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHH
Confidence 32111223455566553 2234568999999999999864332 223 4567899999999
Q ss_pred HHHHHHHHhh
Q 017633 358 ITAAEKVLRQ 367 (368)
Q Consensus 358 ~~~l~~~l~~ 367 (368)
+++|+++++.
T Consensus 457 l~~L~~~~~~ 466 (489)
T PLN02483 457 LEVISEVGDL 466 (489)
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 155
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=2.1e-26 Score=215.87 Aligned_cols=334 Identities=13% Similarity=0.023 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHcC---CCCCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 13 QVLAALGETMKKG---TSFGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 13 ~v~~a~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+++++.+.+... ...+.+.....+|++++++++. ++++|++|+|+++++..++..+.. .++|.|++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~~gD~Vlv~~ 170 (481)
T PTZ00377 92 DVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-DPSDGVMIPI 170 (481)
T ss_pred HHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-CCCCEEEECC
Confidence 5677776655542 2223344556777777777652 478999999999999999976631 3678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCC
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
++|..+...+... |..+...+.....++.. |++++++.++.. ..+++++++...+|++|.+++
T Consensus 171 P~y~~y~~~~~~~-g~~~v~v~~~~~~~~~~------------d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s- 236 (481)
T PTZ00377 171 PQYPLYSAAITLL-GGKQVPYYLDEEKGWSL------------DQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLT- 236 (481)
T ss_pred CCchhHHHHHHHc-CCEEEEEEeccccCCCC------------CHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCC-
Confidence 9998765444333 33332222211111110 789999998741 125665444444455666555
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcc-cCc-ccc----ccC-------CCcchhhhhhhc-c-CCccceeeee--
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGG-AQE----YFG-------VTPDLTTLGKII-G-GGLPVGAYGG-- 221 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g-~~~-~~~----~~~-------~~~di~s~sK~~-~-~G~~iG~v~~-- 221 (368)
.+.+++|+++|++||+++|+||+|.++ +.+ ..+ ... .+. ....+.||||.+ + +|||+||+++
T Consensus 237 ~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~ 316 (481)
T PTZ00377 237 RDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTN 316 (481)
T ss_pred HHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeC
Confidence 444999999999999999999999887 432 121 111 111 112345899985 6 8999999976
Q ss_pred -hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc--cC---CHHHHHHHHH---HHHHHHHHHHHHhc-CCceEE
Q 017633 222 -RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--EP---GTYEYLNKIT---GELTQGIIDAGKKA-GHAICG 291 (368)
Q Consensus 222 -~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~--~~---~~~~~~~~~~---~~l~~~l~~~~~~~-~~~~~~ 291 (368)
++++++.+.... ...++.+.+++.++..+++... +. .+.++.++.. +..++.+.+.+.+. ++....
T Consensus 317 ~p~~li~~l~~~~----~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~ 392 (481)
T PTZ00377 317 IPPEVREQIYKLA----SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQP 392 (481)
T ss_pred CCHHHHHHHHHHh----heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeec
Confidence 788888776321 2334678888888887774211 11 1222222222 22222333333334 333233
Q ss_pred eeccceEEEEeecC-CCcccchhcccccHHHHHHH-HHHHHcCeeecCCCC-------CccccccCCCHHHHHHHHHHHH
Q 017633 292 GYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQF-------EAGFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~~-------~~~~~~~~~~~~~i~~~~~~l~ 362 (368)
+..+.++|+.+.-. ..... ..........+++ ..|.++||.+.|+.. .++|+++..+++++++++++|+
T Consensus 393 p~gg~fl~~~~~l~~~~~~~--~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~ 470 (481)
T PTZ00377 393 VEGAMYAFPRIELPEKAIQE--AKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIK 470 (481)
T ss_pred CCeeEEEEeeccCchhhHHH--HHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHH
Confidence 33456666555311 00000 0000000123444 445567999998742 2467778888899999999999
Q ss_pred HHHhh
Q 017633 363 KVLRQ 367 (368)
Q Consensus 363 ~~l~~ 367 (368)
+++++
T Consensus 471 ~~~~~ 475 (481)
T PTZ00377 471 EFHES 475 (481)
T ss_pred HHHHH
Confidence 98864
No 156
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=4.2e-26 Score=203.76 Aligned_cols=304 Identities=12% Similarity=0.097 Sum_probs=203.7
Q ss_pred eeccCC-CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 4 LIILFP-SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 4 ~~~~g~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+++|. .+|.++++..+++++ |+.+.+.+.+|++.++++++ +++++++++||++|+..++..+. .+++.|+++
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~---~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--~~gd~Vli~ 101 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLET---YVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--PPGRKVVHY 101 (346)
T ss_pred cccccCCCChhHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--CCCCEEEEC
Confidence 567888 899999999999887 44567999999999999998 67899999999999999997662 467788764
Q ss_pred c--CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 82 E--GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
. ...|..+...+...|.++ + .++++++++. . ++++++++++ .+++|.+.+.
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~~-------------------~--~~~~l~~l~~----~-~~~~lIiitg-~s~~G~v~~~ 154 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAEY-------------------F--ESDELSELKK----I-DGTSLVVITG-STMDLKVVSE 154 (346)
T ss_pred CCCCCCchhHHHHHHHcCCEE-------------------e--ccCCHHHHhh----C-cCceEEEEEC-CCCCCcccCH
Confidence 2 345555444444444321 1 0125555432 1 3466777765 4677877664
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
++ +++|+++|++||++|++||+|..+ . .+. .....++...-+.||||++ +|+|+||+++++++++.+......
T Consensus 155 ~~-L~~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~- 230 (346)
T TIGR03576 155 ED-LKRVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQ- 230 (346)
T ss_pred HH-HHHHHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcC-
Confidence 54 999999999999999999999643 1 121 1112233222345899965 578999999999999988753322
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
..++.++++++++.++++.+..+.+.+.++++.+.+.+.+.+ .+. .+..++++++++..
T Consensus 231 --~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~---~~~~~~f~~~~~~~------------ 289 (346)
T TIGR03576 231 --FGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNV---ERTPTGFVIKGVEE------------ 289 (346)
T ss_pred --cccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCC---CcCCCeEEEEeCCC------------
Confidence 233467888899999987543333455566666555555543 222 12234466665521
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCC-----CccccccCCCHH---HHHHHHHHHHHHH
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSD---DIQHTITAAEKVL 365 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~-----~~~~~~~~~~~~---~i~~~~~~l~~~l 365 (368)
........+.|.++||.+.++.. .++|+++..+++ ++++++++|++.+
T Consensus 290 -~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 290 -EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 11123444556678999999642 345677777665 7999999998865
No 157
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=4.9e-26 Score=209.44 Aligned_cols=322 Identities=11% Similarity=0.028 Sum_probs=197.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++++.+++.+.+.....|+ +.....+|++++++++ + .++++++++|+++++..++... ..++|.|++.+
T Consensus 50 ~~~~i~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~--~~~gd~Vlv~~ 126 (404)
T PRK09265 50 APDEILRDVIRNLPTAQGYS-DSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQAL--LNNGDEVLVPA 126 (404)
T ss_pred CCHHHHHHHHHHhhcCCCCC-CCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHh--CCCCCEEEEeC
Confidence 45578888877665433332 3444578888888876 3 5789999999999999888765 35678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|......... .|............++. .|++++++.++ ++++++++...+|++|.+.+.++
T Consensus 127 p~y~~~~~~~~~-~g~~~v~~~~~~~~~~~------------~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~~~~~- 189 (404)
T PRK09265 127 PDYPLWTAAVSL-SGGKPVHYLCDEEAGWF------------PDLDDIRSKIT---PRTKAIVIINPNNPTGAVYSKEL- 189 (404)
T ss_pred CCCcChHHHHHH-cCCEEEEEecccccCCC------------CCHHHHHHhcc---ccceEEEEECCCCCCCcCCCHHH-
Confidence 988865444333 33322211111111110 17899998886 34555444444555676666544
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc-C--CCcchhhhhhhcc-CCccceeeee--hHH----HHHHhc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-G--VTPDLTTLGKIIG-GGLPVGAYGG--RRD----IMEMVA 230 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~-~--~~~di~s~sK~~~-~G~~iG~v~~--~~~----~~~~~~ 230 (368)
+++|+++|++||+++|+||+|.++ ..+.. ...... . ....+.||||.++ +|+|+||+++ ++. +++.+.
T Consensus 190 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~ 269 (404)
T PRK09265 190 LEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLD 269 (404)
T ss_pred HHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHH
Confidence 999999999999999999999887 43321 111111 1 1223468999996 8999999985 343 333332
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHH---HHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecC
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTY---EYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~---~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (368)
. ....+++.|.+++.++.+++...+. +.+. +++.+++ +.+.+.+... +.....+..+.++|+.+...
T Consensus 270 ~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r----~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~ 341 (404)
T PRK09265 270 M----LASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQR----DRAWELLNAIPGVSCVKPKGALYAFPKLDPK 341 (404)
T ss_pred H----HhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHH----HHHHHHHhcCCCCcccCCCcceEEEEEeccc
Confidence 1 1123456778888888777741110 0111 1223333 3343433333 33223344566778776321
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. +...+...+.+.|.++||.+.|+.. .++|+.+..+++++++++++|++++.+
T Consensus 342 ~~--------~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 342 VY--------PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred cc--------CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 00 0012234567788899999988742 245677778999999999999998864
No 158
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=2.4e-25 Score=205.11 Aligned_cols=312 Identities=18% Similarity=0.137 Sum_probs=211.0
Q ss_pred ceeccCC-CcHHHHHHHHHHHHcC---C----CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFP-SYLQVLAALGETMKKG---T----SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~-~~~~v~~a~~~~~~~~---~----~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+..+||. .+|++++++.+++++. . .+....+...+|++.++++++. +.+++++||++|+..+++.+. .+
T Consensus 61 ~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~sG~~An~~~l~~l~--~~ 137 (407)
T PRK07179 61 SNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF-ESCLLCQSGWAANVGLLQTIA--DP 137 (407)
T ss_pred cCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHhC--CC
Confidence 4456666 7899999999998763 1 1222335788999999999864 456789999999999998763 34
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
++.|++. ...|..........+. ++..++++|+++++++++.+ .+++++++++++++|
T Consensus 138 g~~v~~~-~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~n~tG 195 (407)
T PRK07179 138 NTPVYID-FFAHMSLWEGVRAAGA-------------------QAHPFRHNDVDHLRRQIERH--GPGIIVVDSVYSTTG 195 (407)
T ss_pred CCEEEEE-CCcCHHHHHHHHHCCC-------------------eEEEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCC
Confidence 5666664 3344333222222221 22334445899999999742 478899999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchh---cccCccccccCCC--cch--hhhhhhccCCccceeeeehHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFR---LAYGGAQEYFGVT--PDL--TTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~---~g~~~~~~~~~~~--~di--~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
.+.+ +++|+++|++||++||+||+|+... .|.. ....+++. +|+ .|+||++++ |+|++++++++++
T Consensus 196 ~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~ 268 (407)
T PRK07179 196 TIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAG-LVAELGLTSRVHFITASLAKAFAG--RAGIITCPRELAE 268 (407)
T ss_pred cccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCc-hHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCHHHHH
Confidence 9999 9999999999999999999996322 2221 23344542 365 468999974 7999999988877
Q ss_pred HhcCCCC-ccccccCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 228 MVAPAGP-MYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 228 ~~~~~~~-~~~~~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
.+..... ..+++| .++..++++.++++.+... .+.+++.++++++++.|.++ ++. +.+.+.++++.+.
T Consensus 269 ~~~~~~~~~~~~~t--~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~--v~~~~~i~~l~~~-- 338 (407)
T PRK07179 269 YVPFVSYPAIFSST--LLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL----GYN--IRSESQIIALETG-- 338 (407)
T ss_pred HHHHhCcCeeeCCC--CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCC--CCCCCCEEEEEeC--
Confidence 7653221 222333 2445555566777766543 36678888888888888774 221 2234566666642
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeec----CCC---CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~~---~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.......+.+.|.++||.+. +.. ...+|+ +..++++|+++++++|++++++
T Consensus 339 -----------~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 339 -----------SERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred -----------CHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 22345678889999999743 321 223444 5667999999999999998865
No 159
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=3.2e-26 Score=210.52 Aligned_cols=326 Identities=13% Similarity=0.053 Sum_probs=202.3
Q ss_pred CcHHHHHHHHHHHHcCCC-CCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTS-FGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+++++.+.+..... .+.+.....++++.++++++ ..+++++|+|+++|+..++.++. .+++.|++.
T Consensus 49 ~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~--~~gd~Vlv~ 126 (403)
T TIGR01265 49 TDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA--NPGANILVP 126 (403)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC--CCCCEEEEe
Confidence 346788888887765322 22245566778888888774 35789999999999999998763 467889999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|...... ....|.++.........+.. -|++++++.++. +++++++...+|++|.+++..+
T Consensus 127 ~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~i~~p~NPtG~~~~~~~ 190 (403)
T TIGR01265 127 RPGFPLYDTR-AAFSGLEVRLYDLLPEKDWE------------IDLDGLEALADE---KTVAIVVINPSNPCGSVFSRDH 190 (403)
T ss_pred CCCchhHHHH-HHHcCCEEEEecCCcccCCc------------cCHHHHHHHhCc---CccEEEEecCCCCCCCCCCHHH
Confidence 9888764333 23333333221111111100 178999988863 4555555444555676555444
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccC---CCcchhhhhhhcc-CCccceeeeeh--HH-----HHHH
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGGR--RD-----IMEM 228 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~~--~~-----~~~~ 228 (368)
+++|+++|+++|+++|+||+|.++ ..+.. .....+. ....+.||||.++ +|+|+||++++ ++ +.+.
T Consensus 191 -~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~ 269 (403)
T TIGR01265 191 -LQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQG 269 (403)
T ss_pred -HHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHH
Confidence 999999999999999999999988 44422 1111111 1233568999987 89999999873 22 3333
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
+.. . ...+++++.+++.++..+++.. .+.+.++.++..+.-++.+.+.+... +.....+..+.++|+.+.....
T Consensus 270 ~~~---~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~ 344 (403)
T TIGR01265 270 LKN---L-LQRILGPATIVQGALPDILENT-PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELF 344 (403)
T ss_pred HHH---H-hhhhcCCChHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEecccccc
Confidence 321 1 1123466888888887777531 12333333333333334444444333 2222234567788887632110
Q ss_pred cccchhcccccHHHHHHHHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+...+..++++.|+ ++||.+.++.. ..+|+++..+++++++++++|++++.+
T Consensus 345 --------~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 345 --------PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred --------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 00113467888764 67999999753 345777777889999999999998865
No 160
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=6.5e-26 Score=207.60 Aligned_cols=315 Identities=17% Similarity=0.127 Sum_probs=194.9
Q ss_pred cHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
++.+.+++.+.+...... +.+.....+|++++++++ + .++++++|+|+++++..++.+.. .++|.|++..
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vlv~~ 121 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA--GAGDEVILPL 121 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc--CCCCEEEEcC
Confidence 457788887766432222 223344556666666554 2 36899999999999998887663 4678899999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE-EEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA-IILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 161 (368)
++|...... ....|..+.........+.. .|++++++.++. ++++ +++.| +|++|.+++ .+
T Consensus 122 p~y~~~~~~-~~~~g~~~~~v~~~~~~~~~------------~~~~~l~~~~~~---~~~~v~~~~P-~NPtG~~~~-~~ 183 (386)
T PRK07550 122 PWYFNHKMW-LDMLGIRPVYLPCDEGPGLL------------PDPAAAEALITP---RTRAIALVTP-NNPTGVVYP-PE 183 (386)
T ss_pred CCCcchHHH-HHhcCCEEEEEecCCCcCCC------------CCHHHHHHHhcc---cCcEEEEeCC-CCCCCcccC-HH
Confidence 888776433 33334433222111111110 178999998873 4554 55554 455666554 55
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-Cc-ccccc---CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-GG-AQEYF---GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~-~~~~~---~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
.+++|+++|++||+++|+||+|.+| ..+. .. ..... .....+.||||.++ +|+|+||+++++++++.+..
T Consensus 184 ~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~--- 260 (386)
T PRK07550 184 LLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEK--- 260 (386)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHH---
Confidence 5999999999999999999999887 3221 11 11111 12234569999999 89999999999888877663
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
.....+.+++.+++.++..+++.+.+ +...+.+.++++.+.+.|.+. .++ ...+..+.+.|+.+..
T Consensus 261 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~-~~~~~g~~~~~~~~~~-------- 328 (386)
T PRK07550 261 FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL---PGW-ELLASGAYFAYVRHPF-------- 328 (386)
T ss_pred HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-eeCCCceEEEEecCCC--------
Confidence 22334445677787777766653211 112333444444444444432 122 1223345566666521
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccC-CCHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKV 364 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~-~~~~~i~~~~~~l~~~ 364 (368)
...+..+++..|+ ++||.+.++. ...+|+++. .+++++++++++|.++
T Consensus 329 ----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 329 ----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 0233578888876 5799999863 234666666 4789999999999875
No 161
>PRK09105 putative aminotransferase; Provisional
Probab=99.95 E-value=3.9e-26 Score=207.04 Aligned_cols=305 Identities=18% Similarity=0.167 Sum_probs=196.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+++++.+.+.....| +.....+|++.+++.++ ++++|++|+|+++++..++... ..+++.|++.+++|..+
T Consensus 57 ~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l--~~~gd~Vli~~P~y~~~ 132 (370)
T PRK09105 57 PSPAARDAAARSAALSGRY--DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF--TSPTAGLVTADPTYEAG 132 (370)
T ss_pred CCHHHHHHHHHHHHHhcCC--CCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH--cCCCCEEEEeCCChHHH
Confidence 5778999998877543333 33348899999999998 7899999999999999999766 24678899999988776
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
... ....|.++....... .+. .|++++++.. ++++++++...+|++|.+.+ .+.++++++
T Consensus 133 ~~~-~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~~----~~~~~v~l~nP~NPTG~~~~-~~~l~~l~~ 192 (370)
T PRK09105 133 WRA-ADAQGAPVAKVPLRA-DGA-------------HDVKAMLAAD----PNAGLIYICNPNNPTGTVTP-RADIEWLLA 192 (370)
T ss_pred HHH-HHHcCCeEEEecCCC-CCC-------------CCHHHHHhcC----CCCCEEEEeCCCCCCCcCcC-HHHHHHHHH
Confidence 443 333344332221111 111 1778887652 24555554444555676665 444788877
Q ss_pred HHHHhCCEEEEehhhhchhcccCccccccC---CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 169 ITKENGALLIFDEVMTGFRLAYGGAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~~~g~~~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
.|+ +++++|+||+|.+|... ....+..+ ...-+.||||.+| +|+|+||+++++++++.+... ..+..+
T Consensus 193 ~~~-~~~~lIvDEaY~~f~~~-~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~------~~~~~~ 264 (370)
T PRK09105 193 NKP-AGSVLLVDEAYIHFSDA-PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF------GHNPLP 264 (370)
T ss_pred hCC-CCcEEEEECchHHhccC-cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc------CCCCcC
Confidence 654 59999999999776111 11111111 1223468999998 899999999999998887632 223467
Q ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 245 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
.+++.++.++++ ++++.+..++..+..++.+.+.+...+.. ...+.++++++.+. .+..++
T Consensus 265 ~~~~~aa~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~-~~~~~~~f~~~~~~---------------~~~~~l 325 (370)
T PRK09105 265 VPAAAAGLASLR---DPKLVPQRRAENAAVREDTIAWLKKKGYK-CTPSQANCFMVDVK---------------RPAKAV 325 (370)
T ss_pred HHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHCCCC-cCCCCCcEEEEeCC---------------CCHHHH
Confidence 777777766664 33454444444445555555544444432 22344555555431 124789
Q ss_pred HHHHHHcCeeecCCC---CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 325 YRGMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~---~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
++.|+++||.++... ..++|+++. +++++++++++|+++++
T Consensus 326 ~~~L~~~gI~v~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 326 ADAMAKQGVFIGRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred HHHHHHCCcEEecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 999999999994321 234566644 57889999999988763
No 162
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=2e-25 Score=205.14 Aligned_cols=317 Identities=21% Similarity=0.236 Sum_probs=210.3
Q ss_pred ceeccCCC-cHHHHHHHHHHHHcC-CCCC------CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFPS-YLQVLAALGETMKKG-TSFG------APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~~-~~~v~~a~~~~~~~~-~~~~------~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.+++|++ +|++++++.+++.+. ..+. ...+...++++.++++++. +++++++||++|+..++... ..+
T Consensus 45 ~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~-~~~ii~~~~~~a~~~~~~~l--~~~ 121 (393)
T TIGR01822 45 ANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT-EDTILYASCFDANGGLFETL--LGA 121 (393)
T ss_pred CCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECchHHHHHHHHHHh--CCC
Confidence 34567885 889999999988762 2221 1245678999999999975 35666678999999877655 356
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~ 151 (368)
+|.|++.++.|+.. .......+... +.++..|++++++.+++. ..++++++++++++
T Consensus 122 gd~vi~~~~~~~s~-~~~~~~~~~~~-------------------~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 181 (393)
T TIGR01822 122 EDAIISDALNHASI-IDGVRLCKAKR-------------------YRYANNDMADLEAQLKEARAAGARHRLIATDGVFS 181 (393)
T ss_pred CCEEEEeccccHHH-HHHHHhcCCce-------------------EEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCcc
Confidence 78888877655543 33223222211 112234899999999852 12678899988888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch-h-cccCccccccCC--Ccchh--hhhhhccCCccceeeeehHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~-~-~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~ 224 (368)
++|.+.+ +++|+++|++||++||+||+|. ++ . .+. ......+. .+|++ |+||+++ |+|+||++++++
T Consensus 182 ~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~di~~~s~sK~l~-g~r~G~~~~~~~ 255 (393)
T TIGR01822 182 MDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGR-GSHELCGVMGRVDIITGTLGKALG-GASGGFTTARKE 255 (393)
T ss_pred CCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCC-chHHhcCCCCCCeEEEEEChHHhh-CCCcEEEEeCHH
Confidence 8898888 9999999999999999999993 43 1 111 11122332 24554 8999986 579999999998
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
+++.+........ .+.+.++..++++.++++.+.. ++..++++++++++++.|++. ++.. ..+.++++.+.+
T Consensus 256 ~~~~l~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~~~~~i~~- 328 (393)
T TIGR01822 256 VVELLRQRSRPYL-FSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA----GFDI-KPADHPIIPVML- 328 (393)
T ss_pred HHHHHHHhCccce-ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCCC-CCCCCCEEEEEe-
Confidence 8887764221111 1123355666667778776643 345677777878777777663 3221 112234444433
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Cccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++..+..++++.|+++||.+..... ..+| ++..++++|+++++++|++++++
T Consensus 329 ------------~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 329 ------------YDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred ------------CCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1233467899999999999974221 1233 46778999999999999998764
No 163
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.4e-26 Score=205.96 Aligned_cols=306 Identities=14% Similarity=0.083 Sum_probs=196.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
.+|.+++++.+.+......+|+.....+|++.++++++ .. +++++++|+++++..++.++ ..+++.|++..++|..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~--~~~gd~vlv~~P~y~~ 117 (356)
T PRK04870 40 LPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALAC--AKPGATVLAPEPGFVM 117 (356)
T ss_pred CCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHh--cCCCCEEEECCCCHHH
Confidence 67789999998886533333444566899999999997 43 58999998888888888755 2467889999988876
Q ss_pred CchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 017633 88 HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
... .....|..+...+... .+.. |+++++++++.+ +++++++...+|++|.+++ .+.+++|+
T Consensus 118 ~~~-~~~~~g~~~~~i~~~~-~~~~-------------d~~~l~~~~~~~--~~~~v~l~~p~NPtG~~~~-~~~~~~i~ 179 (356)
T PRK04870 118 YRM-SAKLAGLEFVGVPLTA-DFTL-------------DLPAMLAAIAEH--RPALVFLAYPNNPTGNLFD-DADVERII 179 (356)
T ss_pred HHH-HHHHcCCEEEEecCCC-CCCC-------------CHHHHHHHhhcC--CCCEEEEcCCCCCCCCCCC-HHHHHHHH
Confidence 433 3333444333222211 1111 799999998742 5666666544556677666 33377777
Q ss_pred HHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 168 RITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 168 ~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
++| +.++|+||+|.+| ...........+....+.|||| ++ +|+|+||+++++++++.+.... ..++.+.
T Consensus 180 ~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~-----~~~~~~~ 250 (356)
T PRK04870 180 EAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVR-----PPYNVNV 250 (356)
T ss_pred HHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHcc-----CCCcCCH
Confidence 777 7899999999877 3211111122222334569999 77 7999999999999888876422 2345677
Q ss_pred HHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 246 LAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
+++.++..+++.... +...++++++++.+.+.|+ ..+.....+..+.++|+.+. +..++
T Consensus 251 ~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 310 (356)
T PRK04870 251 LTQATALFALEHVDVLDAQAAQLRAERTRLAAALA----ALPGVTVFPSAANFILVRVP----------------DAAAV 310 (356)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECCCCCeEEEEECC----------------CHHHH
Confidence 887776666642110 1123334444444444443 33211233445667777641 13678
Q ss_pred HHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 325 YRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+.|.++||.++++.. .++|+++. +.+++++++++|++++
T Consensus 311 ~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 311 FDGLKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred HHHHHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 8999999999988632 23455544 6789999999998764
No 164
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.95 E-value=4.3e-26 Score=210.05 Aligned_cols=327 Identities=15% Similarity=0.086 Sum_probs=191.3
Q ss_pred CcHHHHHHHHHHHHcC----CCC-CCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKKG----TSF-GAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~----~~~-~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+|.+.+++.+.+... ..+ +.+.....+|++++++++ + ++++|++|+|+++++...+.+ ..++|.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~---~~~gd~ 124 (409)
T PRK07590 48 LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDI---FGPDNT 124 (409)
T ss_pred CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHHh---cCCCCE
Confidence 3467888888877652 112 235566677888888764 3 578999999999998875443 357789
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
|++.+++|......+...+..+.. . .... ..+++.++.+.-+.++..+.+ ++++++++...+|++|.++
T Consensus 125 V~v~~P~Y~~~~~~~~~~g~~~~~-~---~~~~-----~~~~~~v~~~~~~~~~~d~~~--~~~k~i~l~nP~NPTG~~~ 193 (409)
T PRK07590 125 IAVTDPVYPVYVDTNVMAGRTGEA-N---EDGR-----YSGIVYLPCTAENNFVPELPE--EKVDIIYLCFPNNPTGTVL 193 (409)
T ss_pred EEEeCCCCcchHHHHHHcCCcccc-c---cccc-----ccceeEeecccccCCcccCcc--cCceEEEEeCCCCCcCCcC
Confidence 999999998876544443332110 0 0000 000111111000000000111 2566665543344556555
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhc
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~ 230 (368)
+ .+.+++|+++|++||++||+||+|.+| ..+.. ...... +....+.||||.++ +|+|+||+++++++++.+.
T Consensus 194 s-~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~ 272 (409)
T PRK07590 194 T-KEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTS 272 (409)
T ss_pred C-HHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhcc
Confidence 4 555999999999999999999999888 43321 111111 12334569999998 9999999999988876321
Q ss_pred CCC--------Ccccccc-CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 231 PAG--------PMYQAGT-LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 231 ~~~--------~~~~~~t-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
... ....... .+.+.+++.++.++++.- ...+.++.++..+..++.+.+.+...+.....+..+.++|+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~ 351 (409)
T PRK07590 273 DGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVK 351 (409)
T ss_pred ccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEE
Confidence 000 0011122 246778887776666411 012333333333333333444443344332223356677887
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
+.. ..+..+++..|++ +||.+.|+.. .++|+++..+++++++++++|.+++
T Consensus 352 ~~~-------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 352 TPD-------------GMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred CCC-------------CCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence 632 2224678887774 6999998742 2456676678999999999998764
No 165
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=3.2e-26 Score=207.96 Aligned_cols=300 Identities=14% Similarity=0.067 Sum_probs=187.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.++.+++++.+.... ..|. +.....++++.+++++ + +++++++|+|+++++..++.++ ...+++.|++.
T Consensus 41 ~~~~~~~~~~~~~~~-~~Y~-~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l-~~~~gd~Vl~~ 117 (364)
T PRK07865 41 VPPVIQEALAAAADA-PGYP-TTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLL-GLGPGDVVVIP 117 (364)
T ss_pred CCHHHHHHHHHHHhh-CCCC-CccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHH-cCCCCCEEEEC
Confidence 356778887665432 2332 2233445555555554 3 3689999999999998876544 12467889999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|....... ...|.++ +.++ ++++++. ++++++++++.+|++|.+++.++
T Consensus 118 ~p~y~~~~~~~-~~~g~~~-------------------~~~~--~~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~ 169 (364)
T PRK07865 118 ELAYPTYEVGA-RLAGATV-------------------VRAD--SLTELGP------QRPALIWLNSPSNPTGRVLGVDH 169 (364)
T ss_pred CCCcccHHHHH-HhcCCEE-------------------EecC--ChhhCCc------ccceEEEEcCCCCCCCccCCHHH
Confidence 98887653332 2223322 1121 3333322 35677777665666777666554
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCcc-ccc------cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEY------FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~~~------~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
+++|+++|++||+++|+||+|.++ ..+.... ... ......+.||||.++ +|+|+||+++++++++.+..
T Consensus 170 -~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~- 247 (364)
T PRK07865 170 -LRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLE- 247 (364)
T ss_pred -HHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHH-
Confidence 999999999999999999999887 4332211 111 011233568999997 89999999999998887763
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
......++.+.+.+.++.++++ ++++.++.++..+..++.+.+.+.+.+.....+..+.++|+.+.
T Consensus 248 --~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--------- 313 (364)
T PRK07865 248 --VRKHAGMMVPAPVQAAMVAALG---DDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRG--------- 313 (364)
T ss_pred --HHHhcCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCC---------
Confidence 1223445667888877766654 33333333444444444444444444533223334445666541
Q ss_pred hcccccHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~ 362 (368)
.+..++++.|.++||.+.++.. .++|+++..+++++++++++|+
T Consensus 314 ------~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 314 ------EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred ------CCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 1135678889999999988631 2356777678999999999885
No 166
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=9e-26 Score=203.83 Aligned_cols=306 Identities=14% Similarity=0.109 Sum_probs=196.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.++.+++++.+.+..... ++.....+|+++++++++ +++++++|+|+++++..+++.+ . .+.|++..++|+..
T Consensus 33 ~p~~~~~a~~~~~~~~~~--Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~---~-~~~v~i~~P~y~~~ 106 (354)
T PRK06358 33 VPESLKQAITENLDKLVE--YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT---K-PKKVLILAPTFAEY 106 (354)
T ss_pred CCHHHHHHHHHHHHhhhc--CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh---C-CCcEEEecCChHHH
Confidence 367899999887755333 344456899999999997 7899999999999999888764 2 35788989988866
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEE-EEcccCCCCCcccCCHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI-ILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
...+ ...|.++.........++. . | +++.+.+. ++++++ +++| +|++|.++ +.+.+++|+
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~-----------~-d-~~~~~~~~---~~~~~v~~~~P-~NPtG~~~-~~~~~~~l~ 167 (354)
T PRK06358 107 ERAL-KAFDAEIEYAELTEETNFA-----------A-N-EIVLEEIK---EEIDLVFLCNP-NNPTGQLI-SKEEMKKIL 167 (354)
T ss_pred HHHH-HHcCCeeEEEeCccccCCC-----------c-c-HHHHHhhc---cCCCEEEEeCC-CCCCCCcc-CHHHHHHHH
Confidence 4433 3333333222221111110 0 5 44444444 235554 5555 45556555 455599999
Q ss_pred HHHHHhCCEEEEehhhhch-hcccCc-ccc---ccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCcccccc
Q 017633 168 RITKENGALLIFDEVMTGF-RLAYGG-AQE---YFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 168 ~l~~~~~~~li~De~~~~~-~~g~~~-~~~---~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t 240 (368)
++|++|++++|+||+|.+| ..+... ... .......+.||||.++ +|+|+||+++ ++.+++.+.... ..
T Consensus 168 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~-----~~ 242 (354)
T PRK06358 168 DKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMR-----EP 242 (354)
T ss_pred HHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC-----CC
Confidence 9999999999999999888 443211 111 1122234569999999 9999999987 467777776322 24
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
++.+.+++.++.++++ ++.+.++..+..+..++.+.+.+.+.+......+.++++|+.+. +
T Consensus 243 ~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~-------------~--- 303 (354)
T PRK06358 243 WSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLE-------------K--- 303 (354)
T ss_pred CcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcC-------------c---
Confidence 5678888888777774 22333333333333344444444333222223345667777652 1
Q ss_pred HHHHHHHHHHcCeeecCCCCC------ccccccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFE------AGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~------~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++++.|+++||.+.++... ++|++ ..+++++++++++|++++
T Consensus 304 ~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls-~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 PIDLRKELLKKGILIRSCSNYRGLDENYYRVA-VKSREDNKKLLKALEVIL 353 (354)
T ss_pred hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE-eCCHHHHHHHHHHHHHHh
Confidence 268999999999999997432 23343 447789999999998875
No 167
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2.8e-25 Score=203.85 Aligned_cols=312 Identities=20% Similarity=0.193 Sum_probs=211.0
Q ss_pred eccCC-CcHHHHHHHHHHHHcCC-C------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 5 IILFP-SYLQVLAALGETMKKGT-S------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 5 ~~~g~-~~~~v~~a~~~~~~~~~-~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++|+ .+|++++++.+++.... . .....+...++++.++++++. +..+++++|++++..+++.. ..+++
T Consensus 48 ~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~g~~~~~~~l~~~--~~~gd 124 (385)
T PRK05958 48 DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSSGYAANLAVLTAL--AGKGD 124 (385)
T ss_pred CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHHHHHHHHHHh--CCCCC
Confidence 35787 67999999999887621 1 112456788999999999874 45566667999988777654 34567
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++.++ +|+.........+. +++.++..|++++++.++..++++++++++++++++|..
T Consensus 125 ~V~~~~~-~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~ 184 (385)
T PRK05958 125 LIVSDKL-NHASLIDGARLSRA-------------------RVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDL 184 (385)
T ss_pred EEEEeCc-cCHHHHHHHHhcCC-------------------ceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCc
Confidence 7776554 45544443333332 223334448999999997543357788888888888877
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccc--cCCCcc---hhhhhhhccCCccceeeeehHHHHHH
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEY--FGVTPD---LTTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~--~~~~~d---i~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
.+ +++|+++|++||+++|+||+|... . .|... ... ....++ +.|+||++++ +.||+++++++.+.
T Consensus 185 ~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~ 257 (385)
T PRK05958 185 AP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDVILVGTLGKALGS--SGAAVLGSETLIDY 257 (385)
T ss_pred CC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCceEEEEechhhccc--CCcEEEcCHHHHHH
Confidence 77 999999999999999999999532 2 22221 111 222344 5689999973 33888888888877
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
+...... +..+.+.++++++++.++++.+.+. .+.+++.++++++++.|++. ++. ...+.+.++++.+.
T Consensus 258 ~~~~~~~-~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~---- 327 (385)
T PRK05958 258 LINRARP-FIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL----GFQ-LMDSQSAIQPLIVG---- 327 (385)
T ss_pred HHHhCcc-ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCC-cCCCCCCEEEEEeC----
Confidence 6532211 2233456778888888888877553 46677777777777777764 222 22345667777652
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCC-------CCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
...+..++.+.|+++||.+.+++ ...+|+ +..++++++++++++|++++
T Consensus 328 ---------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 328 ---------DNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred ---------CHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 22346789999999999998632 123454 44579999999999998764
No 168
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=2.7e-25 Score=204.74 Aligned_cols=315 Identities=23% Similarity=0.267 Sum_probs=207.7
Q ss_pred eccCC-CcHHHHHHHHHHHHcCC-CC------CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 5 IILFP-SYLQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 5 ~~~g~-~~~~v~~a~~~~~~~~~-~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++|+ .+|++++++.+++.+.. .+ ....+...++++++++.++..+.+++++ |++++..+++.. ..++|
T Consensus 51 ~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~ts-G~~a~~~~~~~l--~~~gd 127 (397)
T PRK06939 51 NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSS-CFDANGGLFETL--LGKED 127 (397)
T ss_pred CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcC-hHHHHHHHHHHh--CCCCC
Confidence 34677 68889999999887631 11 1234677889999999887556666665 689999888655 35678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCC
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNS 153 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~ 153 (368)
.|++.++.|+..... ....+.. .+.++..|++++++.+++. ..+++++++.++++++
T Consensus 128 ~vi~~~~~~~~~~~~-~~~~~~~-------------------~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~ 187 (397)
T PRK06939 128 AIISDALNHASIIDG-VRLCKAK-------------------RYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMD 187 (397)
T ss_pred EEEEEhhhhHHHHHH-HHhcCCc-------------------eEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCC
Confidence 888888776654322 2222221 2222334889999888742 1267888888888888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch-h-cccCccccccCC--Ccchh--hhhhhccCCccceeeeehHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~-~-~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
|...+ +++|.++|++||++||+||+|+ ++ . .+. ......++ .+|++ |+||+++ |+|+||++++++++
T Consensus 188 G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~-g~r~G~v~~~~~~~ 261 (397)
T PRK06939 188 GDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGR-GTVEHFGVMDRVDIITGTLGKALG-GASGGYTAGRKEVI 261 (397)
T ss_pred CCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-CHHHHcCCCCCCcEEEEECHHHhC-ccCceEEEeCHHHH
Confidence 87666 9999999999999999999994 43 2 222 12222333 23554 8999996 45999999999888
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
+.+........ .+.+.++..++++.++++.+.+ +.+.+++.++++.+++.|++. ++.. ..+.+.++++.+
T Consensus 262 ~~l~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~-~~~~~~~~~~~~--- 332 (397)
T PRK06939 262 DWLRQRSRPYL-FSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA----GFTL-GPGEHPIIPVML--- 332 (397)
T ss_pred HHHHHhCcccc-ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCCc-CCCCCCEEEEEE---
Confidence 88764221111 1113345556677777776643 345667777777777777654 2211 122344443332
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCC-------CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+...+..++++.|+++||.+.+.. ...+|+ +..++++++++++++|++++++
T Consensus 333 ----------~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 333 ----------GDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred ----------CCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 122346789999999999987532 123443 4568999999999999998865
No 169
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=7.9e-26 Score=205.71 Aligned_cols=309 Identities=12% Similarity=0.045 Sum_probs=190.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHH----hhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVI----SAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++.+.+++.+.......| .+.....+|+++++ +.++ .+++|++|+|+++++..++.++...++++.|++..
T Consensus 38 ~~~~~~~a~~~~~~~~~~Y-~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~ 116 (374)
T PRK05839 38 TPKFIQDALKNNAHLLNKY-PKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPN 116 (374)
T ss_pred CCHHHHHHHHHHhhccCCC-CCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECC
Confidence 3567788877665432223 22333445555554 4444 57899999999999988776542113578888988
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|..+...+. ..|..+...+.....++. . |+++. .+. +++++++...+|++|.+++ .+.
T Consensus 117 P~y~~~~~~~~-~~g~~v~~v~~~~~~~~~---------~---d~~~~--~~~----~~k~v~i~nP~NPTG~~~s-~~~ 176 (374)
T PRK05839 117 PFYQIYEGAAI-ASRAKVLLMPLTKENDFT---------P---SLNEK--ELQ----EVDLVILNSPNNPTGRTLS-LEE 176 (374)
T ss_pred CCchhhHHHHH-hcCCEEEEeecccccCCc---------C---Ccchh--hhc----cccEEEEeCCCCCcCcccC-HHH
Confidence 88887654443 334333222221111110 0 22222 122 4566665544455666565 455
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccc-c--------ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-E--------YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~-~--------~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~ 231 (368)
+++|+++|++||+++|+||+|.++ ..+..... . ..+....+.||||.++ +|+|+||+++++++++.+..
T Consensus 177 l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~ 256 (374)
T PRK05839 177 LIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKA 256 (374)
T ss_pred HHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHH
Confidence 999999999999999999999887 32222111 1 1122334569999987 89999999999988887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
.. ....++.+.+.+.++.+++. ++.+.+++++..+..++.+.+.+ +.. .+..+.++|+.+.
T Consensus 257 ~~---~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~fi~~~~~-------- 317 (374)
T PRK05839 257 YR---TYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREIL---GIT--IPPATFYVWLPVD-------- 317 (374)
T ss_pred HH---hhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeEEEEEeCC--------
Confidence 21 22234557777777665553 34444444444444444444432 221 3455677777652
Q ss_pred hhcccccHHHHHHHHHHHH-cCeeecCCC--------CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 312 DAKKSETTKFARFYRGMLE-EGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~--------~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...++++.|++ +||.+.|+. ..++|+++..+++++.+++++|+++++
T Consensus 318 --------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 318 --------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred --------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 13678888875 899999862 135677777789999999999999875
No 170
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=5.1e-26 Score=203.41 Aligned_cols=274 Identities=14% Similarity=0.050 Sum_probs=180.0
Q ss_pred HHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCC
Q 017633 36 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 115 (368)
Q Consensus 36 ~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (368)
.+|++.++++++ .++|++|+|+++++..++.+ .+++.|++.+++|......+... |.
T Consensus 52 ~~Lr~~ia~~~~-~~~I~it~Gs~~al~~~~~~----~~gd~v~v~~P~y~~~~~~~~~~-g~----------------- 108 (330)
T PRK05664 52 DGLEAAARAYYG-APQLLPVAGSQAAIQALPRL----RAPGRVGVLSPCYAEHAHAWRRA-GH----------------- 108 (330)
T ss_pred HHHHHHHHHHhC-CCCEEECcCHHHHHHHHHHc----cCCCEEEEcCCChHHHHHHHHHc-CC-----------------
Confidence 799999999985 47999999999999887532 36789999999998764333332 22
Q ss_pred CCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccc
Q 017633 116 TYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 194 (368)
Q Consensus 116 ~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~ 194 (368)
+++.++ ++++++.++ +...+++++|+ |++|.+++.++ +++|+++|+++|+++|+||+|.++ ........
T Consensus 109 --~~~~v~---~~~~~~~~~---~~~~v~l~nP~-NPTG~~~s~~~-l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~ 178 (330)
T PRK05664 109 --QVRELD---EAEVEAALD---SLDVLVVVNPN-NPTGRRFDPAR-LLAWHARLAARGGWLVVDEAFMDNTPQHSLAAC 178 (330)
T ss_pred --eEEEec---hhhHhhhhc---CCCEEEEeCCc-CCCCCccCHHH-HHHHHHHHHhcCCEEEEECCcccCCCccccccc
Confidence 223332 345666664 23346777775 45566555444 999999999999999999999876 22222222
Q ss_pred cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Q 017633 195 EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 273 (368)
Q Consensus 195 ~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 273 (368)
........+.||||.++ +|+|+||+++++++++.+.... .+++.+.+++.++.++++ +..+.++.++..+.
T Consensus 179 ~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~L~---~~~~~~~~~~~~~~ 250 (330)
T PRK05664 179 AHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELL-----GPWTVSGPTRWLAQAALA---DTPWQRRQRERLLA 250 (330)
T ss_pred ccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHh---ChHHHHHHHHHHHH
Confidence 11112234569999999 9999999999999988887321 234567788888777775 22223333333333
Q ss_pred HHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-CCccccccCCCHH
Q 017633 274 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSD 352 (368)
Q Consensus 274 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~~~~~~~~~~~ 352 (368)
.++.+.+.+.+.+.. ...+...++|+.. + +..++++.|.++||.+...+ .+++|+++..+.+
T Consensus 251 ~r~~l~~~L~~~~~~-~~~~~~~f~~~~~-------------~---~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~~~~ 313 (330)
T PRK05664 251 ASQRLAALLRRHGLT-PAGGCALFQWVRT-------------E---DAAALHEFLARRGILTRLFEQPASLRFGLPADEA 313 (330)
T ss_pred HHHHHHHHHHHCCCc-ccCCcceEEEEec-------------C---CHHHHHHHHHHCCeEEEECCCCCeEEEECCCCHH
Confidence 344444444444432 1122234555543 1 24788999999999998753 2356676665778
Q ss_pred HHHHHHHHHHHHHhh
Q 017633 353 DIQHTITAAEKVLRQ 367 (368)
Q Consensus 353 ~i~~~~~~l~~~l~~ 367 (368)
+++++.+.|+++.++
T Consensus 314 ~~~~l~~al~~~~~~ 328 (330)
T PRK05664 314 DWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHHHHhh
Confidence 899999999887654
No 171
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=8e-26 Score=204.80 Aligned_cols=307 Identities=15% Similarity=0.111 Sum_probs=193.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+++++.+.+.... ..|+.....+|+++++++++ +++++++|+|+++++..+++... .++|.|++.+++|...
T Consensus 38 ~~~~~~~a~~~~~~~~~-~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~--~~gd~vlv~~P~y~~~ 114 (353)
T PRK05387 38 PSPKVLEAIRAALGDDL-RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF--NHDRPLLFPDITYSFY 114 (353)
T ss_pred CCHHHHHHHHHHhhhhh-hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc--CCCCEEEEeCCCHHHH
Confidence 36788999988765422 22344456899999999997 78899999999999999997663 4678899999888544
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
.......|.++...++.. .+.. |++++++ ....+++++| +|++|.+.+ .+++.+
T Consensus 115 -~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~------~~~~v~~~~P-~NPtG~~~~----~~~~~~ 168 (353)
T PRK05387 115 -PVYAGLYGIPYEEIPLDD-DFSI-------------DVEDYLR------PNGGIIFPNP-NAPTGIALP----LAEIER 168 (353)
T ss_pred -HHHHHHcCCEEEEeecCC-CCCC-------------CHHHHHh------cCCEEEEeCC-CCCCCCCCC----HHHHHH
Confidence 333344444332221111 1101 6777753 1334455555 555677776 444444
Q ss_pred HHHHh-CCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 169 ITKEN-GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 169 l~~~~-~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+++++ ++++|+||+|.+| ........+......-+.||||.++ +|+|+||+++++++++.+..... ...+++.+.
T Consensus 169 l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~--~~~~~~~~~ 246 (353)
T PRK05387 169 ILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKN--SFNSYPLDR 246 (353)
T ss_pred HHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhc--cCCCCCcCH
Confidence 44444 9999999999876 2111111112222233568999999 89999999999998888763221 113456788
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
+++.++.++++ +.++.++.+++....++.+.+.+.+.++. ..+..++++|+.+. ..+..+++
T Consensus 247 ~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~--------------~~~~~~~~ 308 (353)
T PRK05387 247 LAQAGAIAAIE---DEAYFEETRAKVIATRERLVEELEALGFE-VLPSKANFVFARHP--------------SHDAAELA 308 (353)
T ss_pred HHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCe-ECCCcCcEEEEECC--------------CCCHHHHH
Confidence 88888777664 22333333333333444444444444432 23344556666542 12347889
Q ss_pred HHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 326 RGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 326 ~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+.|.++||.+.+.+. ..+|+++. +++++++++++|++++.
T Consensus 309 ~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 309 AKLRERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 999999999976532 24566654 67999999999999875
No 172
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=1.2e-25 Score=209.08 Aligned_cols=305 Identities=12% Similarity=0.057 Sum_probs=187.9
Q ss_pred hhHHHHHHHHHhhCC---------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCcccc
Q 017633 33 LLENVLAEMVISAVP---------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 103 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~---------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 103 (368)
....+|++++++++. ++++|++|+|+++++..++.+.. .++|.|++..++|.+....+....|..+...
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v 163 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--EPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--CCCCEEEECCCCCCchHHHHhhcCCcEEEEE
Confidence 344567777766652 46889999999999998887663 4688999999988876443332334433222
Q ss_pred CCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 104 GLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+....+++. .|++++++++++. ..+++++++...+|++|.+++ .+.+++|+++|++||+++|+|
T Consensus 164 ~~~~~~~~~------------~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s-~e~l~~ll~~a~~~~~~iI~D 230 (468)
T PLN02450 164 HCSSSNGFQ------------ITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTT-RTELNLLVDFITAKNIHLISD 230 (468)
T ss_pred ecCCccCCc------------CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccC-HHHHHHHHHHHHHCCcEEEEE
Confidence 221112211 1678888887641 135665555544445565554 555999999999999999999
Q ss_pred hhhhch-hcccCc-c-ccc-----------cCCCcchhhhhhhcc-CCccceeeeehH-HHHHHhcCCCCccccccCCCC
Q 017633 181 EVMTGF-RLAYGG-A-QEY-----------FGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 181 e~~~~~-~~g~~~-~-~~~-----------~~~~~di~s~sK~~~-~G~~iG~v~~~~-~~~~~~~~~~~~~~~~t~~~~ 244 (368)
|+|.++ +.+..+ . ... .+....+.||||.++ +|+|+||+++++ .+.+.+.... .....+
T Consensus 231 E~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-----~~~~~s 305 (468)
T PLN02450 231 EIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-----SFGLVS 305 (468)
T ss_pred ccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-----hcCCCC
Confidence 999876 443221 1 111 111223568999998 999999999874 4555554211 112357
Q ss_pred HHHHHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 245 PLAMTAGIHTLKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
.+++.++...++ ++. +.+..+++.+.-++.+.+.+.+.+.....+..|.++|+.+..... . .....
T Consensus 306 ~~~Q~a~~~~L~---~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~-~------~~~~~ 375 (468)
T PLN02450 306 SQTQYLLSALLS---DKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLK-S------NTFEA 375 (468)
T ss_pred HHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcC-c------CCchH
Confidence 778887766664 332 222333333333344444444455443334456688887742110 0 01122
Q ss_pred HHHHHHHHHH-cCeeecCCCC------CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLE-EGVYFAPSQF------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~-~Gi~~~~~~~------~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
..++.+.|++ +||.+.|+.. .++|+++. .+++++++++++|++++.+
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 3457777765 7999999842 24677777 4899999999999998854
No 173
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=205.94 Aligned_cols=318 Identities=15% Similarity=0.132 Sum_probs=197.2
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC-----C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV-----P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
++.+.+++.+.......| .+.....++++.+++++ + +.+++++|+|+++++..++... ..+++.|++.++.
T Consensus 45 ~~~~~~a~~~~~~~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~ 121 (397)
T PRK07568 45 PEVFFEAIKNYDEEVLAY-SHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI--CDPGDEILVPEPF 121 (397)
T ss_pred CHHHHHHHHHHhcCCcCc-CCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh--cCCCCEEEEecCC
Confidence 456778777654332223 34455677888887775 2 5789999999999999988765 3467889998887
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|... .......|..+.........++ ...+++++++.++. +++++++...++++|.+.+.++ ++
T Consensus 122 y~~~-~~~~~~~g~~~~~v~~~~~~g~-----------~~~~~~~l~~~~~~---~~~~v~i~~p~NPtG~~~~~~~-~~ 185 (397)
T PRK07568 122 YANY-NGFATSAGVKIVPVTTKIEEGF-----------HLPSKEEIEKLITP---KTKAILISNPGNPTGVVYTKEE-LE 185 (397)
T ss_pred CccH-HHHHHHcCCEEEEeecCcccCC-----------CCCCHHHHHHhcCc---cceEEEEECCCCCCCccCCHHH-HH
Confidence 7654 3333344443322211111111 01157888888863 4566655444455666555444 99
Q ss_pred HHHHHHHHhCCEEEEehhhhch-hcccC-cccccc-C---CCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCcc
Q 017633 165 AIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-G---VTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMY 236 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~-~---~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~ 236 (368)
+|+++|+++|+++|+||+|.+| ..+.. .....+ + ....+.||||.++ +|+|+||+++ ++++++.+....
T Consensus 186 ~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~--- 262 (397)
T PRK07568 186 MLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLC--- 262 (397)
T ss_pred HHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHh---
Confidence 9999999999999999999888 54431 111111 1 1223459999999 7999999987 467776654211
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
. .+++.+.+.+.++..+++.. +.+.+++++..+..++.+.+.+.+.+ .....+..+.++|+.+.
T Consensus 263 ~-~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~------------ 327 (397)
T PRK07568 263 Q-ARLSPPTLEQIGAAALLDTP--ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLP------------ 327 (397)
T ss_pred h-ccCCCCcHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecC------------
Confidence 1 24567778888877776521 22333333333333333444333332 22222333445666652
Q ss_pred cccHHHHHHHHHHHH------cCeeecCCCC---------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGMLE------EGVYFAPSQF---------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~------~Gi~~~~~~~---------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. .+..+++++|++ +||.+.|+.. .++|+++..+++++++++++|++++++
T Consensus 328 -~-~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 328 -V-DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEK 392 (397)
T ss_pred -C-CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 1 124678888875 5999998631 245677777899999999999998865
No 174
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3e-26 Score=210.58 Aligned_cols=302 Identities=13% Similarity=0.051 Sum_probs=186.5
Q ss_pred CCCChhHHHHHHHHHhhCC-------CCCeEE--EeCChHHHHHHHHHHHHH-hcCCceEEEEcCCCCCCchhhhhhcCC
Q 017633 29 GAPCLLENVLAEMVISAVP-------SIEMVR--FVNSGTEACMGVLRLARA-FTGRERIIKFEGCYHGHADPFLVKAGS 98 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~-------~~~~v~--~~~~gt~a~~~al~~~~~-~~~~~~vi~~~~~~~~~~~~~~~~~~~ 98 (368)
|.+.....+|++++++++. .+++|+ .|+||++|+..++.++.. ..++|.|++.+++|+++...+ ...|.
T Consensus 68 Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~-~~~G~ 146 (404)
T PTZ00376 68 YLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIF-KSAGL 146 (404)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-HHcCC
Confidence 4456777888888888752 346787 488999999988754322 256889999999998875443 34444
Q ss_pred CccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE
Q 017633 99 GVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 177 (368)
Q Consensus 99 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~l 177 (368)
.+...+. +....-. |++.+++.+++..++++++++...+|++|.+++ ++.+++|+++|++|++++
T Consensus 147 ~~~~v~l~~~~~~~~-------------d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s-~~~~~~l~~~a~~~~~~i 212 (404)
T PTZ00376 147 NVKEYRYYDPKTKGL-------------DFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPT-EEQWKEIADVMKRKNLIP 212 (404)
T ss_pred ceeeccccCcccCCc-------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhCCcEE
Confidence 3332222 1111111 799999999754334555555555555666555 444999999999999999
Q ss_pred EEehhhhch-hccc---Cccc---cc-cCCCcchhhhhhhcc-CCccceee---eehHHHHHHhcCC-CCccccccCCCC
Q 017633 178 IFDEVMTGF-RLAY---GGAQ---EY-FGVTPDLTTLGKIIG-GGLPVGAY---GGRRDIMEMVAPA-GPMYQAGTLSGN 244 (368)
Q Consensus 178 i~De~~~~~-~~g~---~~~~---~~-~~~~~di~s~sK~~~-~G~~iG~v---~~~~~~~~~~~~~-~~~~~~~t~~~~ 244 (368)
|+||+|.++ ..+. .... .. ......+.||||.++ +|+|+||+ ++++++++.+... .........+.+
T Consensus 213 i~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 292 (404)
T PTZ00376 213 FFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPP 292 (404)
T ss_pred EEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCc
Confidence 999999887 4321 1011 11 112334569999999 99999998 4677654433210 011111222446
Q ss_pred HHHHHHHHHHHHHHc-cCCH-------HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 245 PLAMTAGIHTLKRLK-EPGT-------YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~-~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.+++.++..+++.-. .+.+ .++++++++.+.+.|++.....++....+..+.++|+.+
T Consensus 293 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~-------------- 358 (404)
T PTZ00376 293 IHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL-------------- 358 (404)
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC--------------
Confidence 778888777764210 0112 233445555555555443100011111233445556543
Q ss_pred ccHHHHHHHHHHHHc-CeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLEE-GVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~-Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++++|.++ ||.+.|++ |+++. .+.+++++++++|++++.-
T Consensus 359 ----~~~~~~~L~~~~~v~v~p~~----Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 359 ----TKEQVERLIEKYHIYLLDNG----RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred ----CHHHHHHHHHhCCEeecCCC----eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 15788888877 99999984 77665 7999999999999998753
No 175
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=1.3e-25 Score=202.94 Aligned_cols=302 Identities=15% Similarity=0.122 Sum_probs=195.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|++++++.++......|+ .....++++.++++++ +.+++++++|+++++..+++.+ ..+++.|++.++.|...
T Consensus 33 ~~~~~~~a~~~~~~~~~~y~--~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l--~~~gd~v~~~~p~y~~~ 108 (346)
T TIGR01141 33 PPPKAKEALRAEADKLHRYP--DPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF--LEPGDAVLVPPPTYSMY 108 (346)
T ss_pred CCHHHHHHHHHhHHHhhcCC--CCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh--cCCCCEEEEcCCCHHHH
Confidence 57789999998875433343 3334899999999997 6789999999999998887655 24678899988877533
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
. ......|.++........ +.. |++++++.+. +++++++++..+|++|.+.+ ++++.+
T Consensus 109 ~-~~~~~~g~~~~~~~~~~~-~~~-------------d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~----~~~~~~ 166 (346)
T TIGR01141 109 E-ISAKIHGAEVVKVPLDED-GQL-------------DLEDILVAID---DKPKLVFLCSPNNPTGNLLS----RSDIEA 166 (346)
T ss_pred H-HHHHHcCCeEEEeccCCC-CCC-------------CHHHHHHhcC---CCCCEEEEeCCCCCCCCCCC----HHHHHH
Confidence 2 223333443332211111 111 8899988764 45677776666667787777 455555
Q ss_pred HHHH--hCCEEEEehhhhch-hcccCcc-ccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 169 ITKE--NGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 169 l~~~--~~~~li~De~~~~~-~~g~~~~-~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
+|+. +++++|+||+|.++ ..+.... ........-+.|+||.++ +|+|+||+++++++++.+.... .+++.
T Consensus 167 l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-----~~~~~ 241 (346)
T TIGR01141 167 VLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVR-----APFNL 241 (346)
T ss_pred HHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhcc-----CCCCC
Confidence 5554 49999999999877 3221111 111111122358999997 7999999999999988887422 24566
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchhcccccHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
+++++.++.++++.. ++.++.++..+..++.+.+.+.+. +.. ..+..+.++|+.+. . +..
T Consensus 242 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~-------------~--~~~ 302 (346)
T TIGR01141 242 SRLAQAAAIAALRDD---DFIEKTVEEINAERERLYDGLKKLPGLE-VYPSDANFVLIRFP-------------R--DAD 302 (346)
T ss_pred CHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCE-ECCCcCCEEEEecC-------------C--CHH
Confidence 788888877766532 133333343344444444444333 322 33345667777652 1 357
Q ss_pred HHHHHHHHcCeeecCCCC-----CccccccCCCHHHHHHHHHHHH
Q 017633 323 RFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 323 ~~~~~l~~~Gi~~~~~~~-----~~~~~~~~~~~~~i~~~~~~l~ 362 (368)
++++.|.++||.+.++.. ..+|+++. ++++++++++.|+
T Consensus 303 ~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 303 ALFEALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 899999999999998753 34566654 7899999998763
No 176
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=4.5e-26 Score=204.04 Aligned_cols=279 Identities=16% Similarity=0.115 Sum_probs=176.8
Q ss_pred CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 30 APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
||+....+|++.++++++ ..++|++|+|+++++..++.+. .+ +++++..++|..+...+... |..+...++..
T Consensus 37 Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~---~~-~~vv~~~P~y~~y~~~~~~~-G~~v~~vp~~~- 110 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI---NV-GNIIIVEPNFNEYKGYAFTH-GIRISALPFNL- 110 (332)
T ss_pred CcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh---CC-CcEEEeCCChHHHHHHHHHc-CCeEEEEeCCc-
Confidence 567778999999999998 7889999999999999988643 33 35777788887764444333 33322211110
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 187 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~ 187 (368)
.. .|.+.++ + .++++++++..+|++|.+++ .+.+++|+++|++||+++|+||+|.+| .
T Consensus 111 ~~--------------~~~~~l~----~--~~~k~v~l~nP~NPTG~~~s-~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~ 169 (332)
T PRK06425 111 IN--------------NNPEILN----N--YNFDLIFIVSPDNPLGNLIS-RDSLLTISEICRKKGALLFIDEAFIDFVP 169 (332)
T ss_pred cc--------------CcHHHHh----h--cCCCEEEEeCCCCCcCCccC-HHHHHHHHHHHHHcCCEEEEecchhcccc
Confidence 00 0333332 2 14455554444455666555 444999999999999999999999988 4
Q ss_pred cccCcccc---ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC--
Q 017633 188 LAYGGAQE---YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-- 261 (368)
Q Consensus 188 ~g~~~~~~---~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-- 261 (368)
.+...... ..+....+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++. . ...+
T Consensus 170 ~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~-----~~~~~~~~~~~~l~-~---~~~~~~ 240 (332)
T PRK06425 170 NRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKIT-----EPWSVCDPAIDFIR-S---IDLDYV 240 (332)
T ss_pred ccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcC-----CCCccCHHHHHHHH-H---hhhHHH
Confidence 33111111 1122334569999999 9999999999999988887422 23344444433221 1 1111
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC
Q 017633 262 --GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ 339 (368)
Q Consensus 262 --~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~ 339 (368)
...+.++++++.+.+.|+ +.++....++.++++|+.+. +..++++.|+++||.+.++.
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~----~~g~~~~~~~~g~f~~~~~~----------------~~~~~~~~l~~~gi~v~~~~ 300 (332)
T PRK06425 241 AKHSLDIMENERSYLINNLE----AMGFRAAGDPSANFITFMIP----------------DAHDFYSYLLKNGILVRLLD 300 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HCCCEECCCCCceEEEEEcC----------------CHHHHHHHHHHCCeEEEECC
Confidence 223344444444444444 34432222345677777651 24789999999999999874
Q ss_pred CC------ccccccCCCHHHHHHHHHHHHHHH
Q 017633 340 FE------AGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 340 ~~------~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+ ++|+++. +.+++++++++|++++
T Consensus 301 ~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 301 DYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 32 3445533 6789999999999876
No 177
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=205.50 Aligned_cols=318 Identities=14% Similarity=0.116 Sum_probs=202.8
Q ss_pred CcHHHHHHHHHHHHcC---CCCCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 10 SYLQVLAALGETMKKG---TSFGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.++.+++++.+.+... ...+.+.....++++.++++++ +++++++++|+++++..++... ..+++.|+
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vl 124 (394)
T PRK06836 47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAI--LNPGDEVI 124 (394)
T ss_pred CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHh--cCCCCEEE
Confidence 3557888887766542 1223344556667777777642 4789999999999999988765 24678899
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+.+++|..+. ......|.++...+........ |+++++++++ ++++++++.+.++++|.+++.
T Consensus 125 i~~p~~~~~~-~~~~~~g~~v~~v~~~~~~~~~-------------d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~ 187 (394)
T PRK06836 125 VFAPYFVEYR-FYVDNHGGKLVVVPTDTDTFQP-------------DLDALEAAIT---PKTKAVIINSPNNPTGVVYSE 187 (394)
T ss_pred EcCCCCccHH-HHHHHcCCEEEEEecCCccCcC-------------CHHHHHhhcC---cCceEEEEeCCCCCCCcCCCH
Confidence 9888887753 3333344443332221111111 7999999986 357777776666667776665
Q ss_pred HHHHHHHHHHHHH------hCCEEEEehhhhch-hcccC--ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHH-
Q 017633 160 PDFLNAIRRITKE------NGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM- 228 (368)
Q Consensus 160 ~~~l~~i~~l~~~------~~~~li~De~~~~~-~~g~~--~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~- 228 (368)
++ +++|+++|++ ||+++|+||+|.++ ..+.. .....++....+.||||.++ +|+|+||+++++++.+.
T Consensus 188 ~~-~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~ 266 (394)
T PRK06836 188 ET-LKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDAD 266 (394)
T ss_pred HH-HHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhH
Confidence 55 9999999999 89999999999887 43321 11122233334568999999 89999999998765332
Q ss_pred --hcCCCCccc-cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 229 --VAPAGPMYQ-AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 229 --~~~~~~~~~-~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
......... ......+.+.+.++...++ +....+.++++++.+.+.|++ .+.....+..+.++|+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~gg~~~~~~~~-- 337 (394)
T PRK06836 267 DLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTE----LGFECVKPQGAFYLFPKSP-- 337 (394)
T ss_pred HHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHh----CCCEeecCCceEEEEEeCC--
Confidence 110000001 1123456666666554443 222234455555555555544 3433233334556666541
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
. .+..++++.|.++||.+.++.. ..+|+++..+++++++++++|+++++++
T Consensus 338 -----------~-~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 338 -----------E-EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -----------C-CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 1 1346788889999999999842 3466776689999999999999998764
No 178
>PLN02672 methionine S-methyltransferase
Probab=99.95 E-value=2.5e-25 Score=218.03 Aligned_cols=333 Identities=11% Similarity=0.059 Sum_probs=202.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CC---CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI---EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~---~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
.+|.+++++.+.+..........+...++++++++.++ +. +++++++|+++++..++.++. .++|.|++..++|
T Consensus 711 pPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl--~pGD~VLVp~PtY 788 (1082)
T PLN02672 711 VPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV--QEGGTLCFPAGSN 788 (1082)
T ss_pred CCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc--CCCCEEEEeCCCh
Confidence 67789999988776533322234568899999999876 32 489999988888877777653 4678999999988
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
..+...+. ..|..+...+.....++.. |++++++++++. .+..+++++|++|++|.+++ .+.+++
T Consensus 789 ~~Y~~~a~-~~Ga~vv~Vpl~~e~gf~l------------D~d~Le~al~~~-~~~~I~L~nPnhNPTG~v~S-~eeLe~ 853 (1082)
T PLN02672 789 GTYVSAAK-FLKANFRRIPTKSSDGFKL------------TAKTLASTLETV-KKPWVYISGPTINPTGLLYS-NSEIEE 853 (1082)
T ss_pred HHHHHHHH-HcCCEEEEEecccccCCCC------------CHHHHHHHhccC-CCCEEEEECcCCCCcCccCC-HHHHHH
Confidence 87654433 3344333222211122211 789999998632 13457777787555666555 455999
Q ss_pred HHHHHHHhCCEEEEehhhhch-hcccCc---ccc----cc-C-----CCcchhhhhhhcc-CCccceeeeeh-HHHHHHh
Q 017633 166 IRRITKENGALLIFDEVMTGF-RLAYGG---AQE----YF-G-----VTPDLTTLGKIIG-GGLPVGAYGGR-RDIMEMV 229 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~-~~g~~~---~~~----~~-~-----~~~di~s~sK~~~-~G~~iG~v~~~-~~~~~~~ 229 (368)
|+++|++||++||+||+|.++ +.+... ... .+ . ....+.||||.++ +|+|+||++++ +++++.+
T Consensus 854 Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l 933 (1082)
T PLN02672 854 ILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAF 933 (1082)
T ss_pred HHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHH
Confidence 999999999999999999877 544221 010 11 0 1123458999999 89999999985 5578877
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH-------HHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE-------YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
..... .......++.++.++++++.. .+..+.+ .++++++.+.+.| .+.+.....+..+.++|+.+
T Consensus 934 ~~~~~--~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L~e~L----~~~Gi~v~~PeGGFfLwl~l 1006 (1082)
T PLN02672 934 HSAPG--LSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERLKETL----EACGWDVLEPQGGISMVAKP 1006 (1082)
T ss_pred HHhhh--hcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCeEecCCcEEEEEEEc
Confidence 63211 111112233343333332210 1122322 3444444444444 34454333344455666654
Q ss_pred ecCC---Cc-ccchhcccccHHHHHHHHHHHHc-CeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 303 TEGP---VY-NFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 303 ~~~~---~~-~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.... ++ .+.........++.++++.|+++ ||.+.||.. .++|+++..+++++++++++|+++.+
T Consensus 1007 ~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1007 SAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 2110 00 00000000012357899999876 999999743 34678888899999999999998764
No 179
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=5.1e-25 Score=200.33 Aligned_cols=311 Identities=20% Similarity=0.180 Sum_probs=205.6
Q ss_pred eeccCC-CcHHHHHHHHHHHHcCC-CC------CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFP-SYLQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~-~~~~v~~a~~~~~~~~~-~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
.+++|+ .+|++++++.+++.... .+ ....+...++++.++++++..+.++++ +|++++..+++.+ ..++
T Consensus 24 ~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~-~G~~~~~~~l~~~--~~~g 100 (360)
T TIGR00858 24 NDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFS-SGYLANVGVISAL--VGKG 100 (360)
T ss_pred CCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEEC-chHHHHHHHHHHh--CCCC
Confidence 357896 78999999999887621 11 112466788999999998755555555 5788888776654 3467
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g 154 (368)
+.|++.++.|. .........+.+ +..++..|++++++.++++. ++++++++.++++++|
T Consensus 101 d~v~~~~~~~~-~~~~~~~~~g~~-------------------~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G 160 (360)
T TIGR00858 101 DLILSDALNHA-SLIDGCRLSGAR-------------------VRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDG 160 (360)
T ss_pred CEEEEEccccH-HHHHHHHhcCCc-------------------eEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCC
Confidence 77777665544 333333333322 22233348999999998642 3578888888888888
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-CccccccCCCcc-----hhhhhhhccCCccceeeeehHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD-----LTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~~~~d-----i~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
...+ +++|.++|++||+++|+||+|+.+ .... ......+++.++ +.|+||++++ +.||+++++++++
T Consensus 161 ~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~--~gG~~~~~~~~~~ 234 (360)
T TIGR00858 161 DIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS--YGAYVAGSQALID 234 (360)
T ss_pred CCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc--cCcEEEcCHHHHH
Confidence 7777 999999999999999999999643 2111 111223333332 5699999984 3389999888887
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.+...... ...+.+.++.+++++.++++.+.. +.+.+++.++++++.+.|++. +.. .....+.++|+.+.
T Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~--- 305 (360)
T TIGR00858 235 YLINRART-LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL----GFT-LMPSCTPIVPVIIG--- 305 (360)
T ss_pred HHHHhCcc-ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc----CCc-cCCCCCCEEEEEeC---
Confidence 76532211 112224566777777788876643 245677777777777777663 322 22345667777652
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Ccccc--ccCCCHHHHHHHHHHHH
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAE 362 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~~--~~~~~~~~i~~~~~~l~ 362 (368)
...+..++++.|.++||.+.++.. ..+|+ +..++++|+++++++|+
T Consensus 306 ----------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 306 ----------DNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 223467899999999999975321 23454 44569999999998874
No 180
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.95 E-value=1.1e-25 Score=208.16 Aligned_cols=300 Identities=13% Similarity=0.107 Sum_probs=184.1
Q ss_pred hhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHh---cCCceEEE-EcCCCCCCchhhhhhc---CC
Q 017633 33 LLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAF---TGRERIIK-FEGCYHGHADPFLVKA---GS 98 (368)
Q Consensus 33 ~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~---~~~~~vi~-~~~~~~~~~~~~~~~~---~~ 98 (368)
....+|++.+++++ + .+++|++|+|+++++..++.+.... ..++.|++ ..++|+++........ +.
T Consensus 74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~ 153 (416)
T PRK09440 74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY 153 (416)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence 44567777777765 3 5789999999999999998766421 13578888 6899988654322111 01
Q ss_pred CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 017633 99 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li 178 (368)
+......+. +. .... -|+++++ +. ++++++++.+.+|++|.+++ .+.+++|+++|++||+++|
T Consensus 154 ~~~~~~~~~-~~---------~~~~-~d~~~l~--~~---~~~~~i~l~~P~NPTG~~~s-~~~~~~l~~~a~~~~~~iI 216 (416)
T PRK09440 154 RPNIELLPE-GQ---------FKYH-VDFEHLH--ID---EDTGAICVSRPTNPTGNVLT-DEELEKLDALARQHNIPLL 216 (416)
T ss_pred ccccccccc-cc---------cccC-CCHHHcc--cC---CCceEEEEecCCCCCCccCC-HHHHHHHHHHHHHcCCcEE
Confidence 000000000 00 0000 1677776 22 34555555444555676665 4459999999999999999
Q ss_pred EehhhhchhcccCc-ccc--ccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHH
Q 017633 179 FDEVMTGFRLAYGG-AQE--YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 255 (368)
Q Consensus 179 ~De~~~~~~~g~~~-~~~--~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l 255 (368)
+||+|..+.....+ ... ..+....+.||||...+|+|+||+++++++++.+... ......+.+.+.+.++..++
T Consensus 217 ~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~~l~~~~~~~---~~~~~~~~s~~~q~~~~~~l 293 (416)
T PRK09440 217 IDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADEEIIEALSNM---NGIISLAPGRLGPAIAAEMI 293 (416)
T ss_pred EeCCccccCCCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCHHHHHHHHHH---HHHhccCCCcHHHHHHHHHh
Confidence 99999643111100 000 0122334679999744899999999999988887632 22233466888888877776
Q ss_pred HHHccCCHHH--------HHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 256 KRLKEPGTYE--------YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 256 ~~~~~~~~~~--------~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
+ +.++.+ .++++++.+++.|.+.+...+.....+..+.++|+.+... ..+..++.+.
T Consensus 294 ~---~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~------------~~~~~~~~~~ 358 (416)
T PRK09440 294 E---SGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDL------------PITTEELYQR 358 (416)
T ss_pred c---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCC------------CCCHHHHHHH
Confidence 5 333322 2334444444555443322222222344567888876321 1234678888
Q ss_pred HHHcCeeecCCCC-------------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 328 MLEEGVYFAPSQF-------------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 328 l~~~Gi~~~~~~~-------------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
|.++||.+.|+.. .++|+++..+++++++++++|++++.+
T Consensus 359 l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 359 LKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999999998631 145677766899999999999998854
No 181
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=3e-25 Score=207.07 Aligned_cols=304 Identities=12% Similarity=0.067 Sum_probs=186.3
Q ss_pred hHHHHHHHHHhhC----C-----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccC
Q 017633 34 LENVLAEMVISAV----P-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 104 (368)
Q Consensus 34 ~~~~l~~~l~~~~----~-----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (368)
...+|++++++++ + ++++|++|+|+++|++.++.++. .++|.|++..+.|.+....+....|.++...+
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--DPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--CCCCEEEECCCCccchHHHHHhhCCCEEEEEe
Confidence 3345555555543 2 46899999999999999997663 56789999999998865433323344433222
Q ss_pred CCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeh
Q 017633 105 LPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De 181 (368)
+...++.. .|++++++++.+ ...+++++++...+|++|.+++ .+.+++|+++|++||++||+||
T Consensus 173 ~~~~~~~~------------~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s-~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 173 CSSSDNFK------------LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLD-KDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred CCCCccCc------------CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCC-HHHHHHHHHHHHHcCCEEEEEc
Confidence 21111110 068888766532 1235665555444445666555 5559999999999999999999
Q ss_pred hhhch-hcccCc-ccccc----C---CCcc----hhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHH
Q 017633 182 VMTGF-RLAYGG-AQEYF----G---VTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPL 246 (368)
Q Consensus 182 ~~~~~-~~g~~~-~~~~~----~---~~~d----i~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~ 246 (368)
+|.++ +.+..+ +.... . ..++ +.||||.|+ +|+|+||+++ ++.+.+.+.... .....+.+
T Consensus 240 iY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-----~~~~vs~~ 314 (496)
T PLN02376 240 IYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-----SFGLVSSQ 314 (496)
T ss_pred CccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-----hcCCCCHH
Confidence 99886 444221 11111 1 1122 458999998 9999999988 566666544211 11235677
Q ss_pred HHHHHHHHHHHHccCCHH-HHH---HHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHH
Q 017633 247 AMTAGIHTLKRLKEPGTY-EYL---NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 247 ~~~a~~~~l~~~~~~~~~-~~~---~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
.+.++.+.++ ++++. +++ +++.+..++.+.+.+.+.+.....+..|.++|+++....... .......
T Consensus 315 ~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~------~~~~~e~ 385 (496)
T PLN02376 315 TQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDR------NSFESEI 385 (496)
T ss_pred HHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccC------CchhHHH
Confidence 7777655553 44442 222 333333333444444444544334556788898874321000 0111236
Q ss_pred HHHHHHHHc-CeeecCCCC------CccccccC-CCHHHHHHHHHHHHHHHh
Q 017633 323 RFYRGMLEE-GVYFAPSQF------EAGFTSLA-HSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 323 ~~~~~l~~~-Gi~~~~~~~------~~~~~~~~-~~~~~i~~~~~~l~~~l~ 366 (368)
++++.|+++ ||.+.||.. +++|+++. ++++++++++++|++++.
T Consensus 386 ~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 386 ELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 788888865 999999743 24567776 588999999999999874
No 182
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-25 Score=202.49 Aligned_cols=312 Identities=16% Similarity=0.131 Sum_probs=197.8
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++ .+|.+.+++.+.......| ++....+|++.++++++ +.+++++|+|+++++..++... ..++|.|++..+
T Consensus 46 ~~~~-~~~~~~~al~~~~~~~~~Y--~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~--~~~gd~vli~~P 120 (371)
T PRK05166 46 NPLG-PSPAVRRAFADIAELLRLY--PDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAV--LRPGDRVVTLYP 120 (371)
T ss_pred CCCC-CCHHHHHHHHHHHHHhhcC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh--cCCCCEEEEcCC
Confidence 3444 5677888887754443333 33223589999999987 7789999999999999888655 356788999888
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|..... .....|..+.........++ |++++++.++. +++++++...+|++|.+++.+ .+
T Consensus 121 ~y~~~~~-~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~~---~~~~v~l~~p~NPtG~~~~~~-~~ 181 (371)
T PRK05166 121 SFPLHED-YPTMMGARVERVTVTPDLGF--------------DLDALCAAVAR---APRMLMFSNPSNPVGSWLTAD-QL 181 (371)
T ss_pred ChHHHHH-HHHHcCCeEEEeecCCCCCC--------------CHHHHHHhhhc---CCCEEEEeCCCCCCCCCCCHH-HH
Confidence 8875432 22333433322111111111 78999988873 445555544455567666544 48
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc----CCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPM 235 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~ 235 (368)
++|+++|++ ++++|+||+|.++ ..+.. ...... .....+.||||.++ +|+|+||+++ ++++++.+....
T Consensus 182 ~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~-- 258 (371)
T PRK05166 182 ARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVR-- 258 (371)
T ss_pred HHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhc--
Confidence 888888864 8899999999887 32221 111111 11233568999999 9999999765 677877775322
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
..++.+.+++.++.+++. ++++.++..+..+..++.+.+.+.+.+.. ..+..+.++|+.+.
T Consensus 259 ---~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~-~~p~~g~fl~~~~~------------ 319 (371)
T PRK05166 259 ---TPFNVNGAAQAAALAALD---DEEHLAKGVALALAERERLKKELAEMGYR-IAPSRANFLFFDAR------------ 319 (371)
T ss_pred ---cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCcCe-eCCCcCCEEEEeCC------------
Confidence 234668888877776664 23344443333333444444444444443 23455677777642
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+..++++.|+++||.+.++.. .++|+++. +.++++++.+.|++++.
T Consensus 320 ---~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~-~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 320 ---RPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG-SPEENDHFVAALDKVLE 370 (371)
T ss_pred ---CCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 1247899999999999998743 23455544 56678888888887653
No 183
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.8e-25 Score=202.34 Aligned_cols=299 Identities=16% Similarity=0.083 Sum_probs=184.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|.+++++.+.... ..|. ......+|++++++++ + +++++++|+|+++++..++.++. ..++|.|++.
T Consensus 35 ~~~~~~~~~~~~~~~-~~Y~-~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~-~~~gd~Vl~~ 111 (357)
T TIGR03539 35 VPPLIRAALAAAADA-PGYP-QTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG-LGPGDTVVIP 111 (357)
T ss_pred CCHHHHHHHHHHHhh-CCCC-cccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHc-CCCCCEEEEC
Confidence 456788887765432 2222 2233345555555543 3 36899999999999988776441 2467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+++|.+..... ...|.++ +.++ +++.++ . ++++++++++.+|++|.+.+.++
T Consensus 112 ~p~y~~~~~~~-~~~g~~~-------------------~~v~--~~~~l~---~---~~~~~v~~~~p~NPtG~~~~~~~ 163 (357)
T TIGR03539 112 ELAYPTYEVGA-LLAGATP-------------------VAAD--DPTELD---P---VGPDLIWLNSPGNPTGRVLSVDE 163 (357)
T ss_pred CCCcHHHHHHH-HhcCCEE-------------------eccC--ChhhcC---c---cCccEEEEeCCCCCcCccCCHHH
Confidence 99997654332 2323322 1111 333322 1 35677777666666777666555
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCcc-ccc------cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEY------FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~~~------~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
+++|.++|++||+++|+||+|.++ ..+.... .+. .....-+.||||.++ +|+|+||+++++++++.+...
T Consensus 164 -~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~ 242 (357)
T TIGR03539 164 -LRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTV 242 (357)
T ss_pred -HHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHH
Confidence 999999999999999999999877 4332211 110 011223458999997 899999999999888877632
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
.....++.+.+++.++.++++ ++.+.++.++..+..++.+.+.+.+.+.....+..+.++|+...
T Consensus 243 ---~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~--------- 307 (357)
T TIGR03539 243 ---RKHAGLMVPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRG--------- 307 (357)
T ss_pred ---HhhcccCCCHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECC---------
Confidence 222345677888887766664 22333333333333334444444444433233334445565531
Q ss_pred hcccccHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAA 361 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l 361 (368)
.+..++.+.|.++||.+.++.. ..+|+++..+++++++++++|
T Consensus 308 ------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 308 ------EDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred ------CCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 1246788899999999999742 345677777889999999876
No 184
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=2.3e-24 Score=197.68 Aligned_cols=314 Identities=19% Similarity=0.208 Sum_probs=207.4
Q ss_pred eccCC-CcHHHHHHHHHHHHcCCC----C---CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 5 IILFP-SYLQVLAALGETMKKGTS----F---GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 5 ~~~g~-~~~~v~~a~~~~~~~~~~----~---~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
+++|+ .+|.+++++.+++.+... + ....+...++++++++.++..+.++++ +|++++..++... ..+++
T Consensus 42 ~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~-sG~~a~~~a~~~~--~~~gd 118 (385)
T TIGR01825 42 NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQ-SGFNTNQGVLSAL--LRKGD 118 (385)
T ss_pred CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEEC-cHHHHHHHHHHHh--CCCCC
Confidence 45788 899999999998875311 1 123567889999998887754555555 6899999888765 34667
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGF 155 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~ 155 (368)
.|++.++ +|+.........+... ..++..|++++++.+++.. +++++++++++++++|.
T Consensus 119 ~vi~~~~-~~~~~~~~~~~~g~~~-------------------~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~ 178 (385)
T TIGR01825 119 IVLSDEL-NHASIIDGLRLTKATK-------------------KIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGD 178 (385)
T ss_pred EEEEEcc-ccHHHHHHHHhcCCce-------------------EEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCC
Confidence 6666554 4554433333322211 1122237888998887542 36888889988888898
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccccCCCc----chhhhhhhccCCccceeeeehHHHHHH
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEYFGVTP----DLTTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~~~~~~----di~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
+.+ +++|.++|++||+++|+||+|..+ . .+. .....+++.+ .+.||||++++ +.||+++++++++.
T Consensus 179 ~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~ 251 (385)
T TIGR01825 179 VAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV--VGGYAAGHKELIEY 251 (385)
T ss_pred ccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc--CCCEEecCHHHHHH
Confidence 888 999999999999999999999643 2 222 1222233323 35799999963 44888888888887
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
+........ .+...++..++++.++++.+.+ ++..+++.++++++++.|++. ++.. ....++++++.+.
T Consensus 252 ~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~~~~~~~~~---- 321 (385)
T TIGR01825 252 LKNRARPFL-FSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL----GYDT-GGSETPITPVVIG---- 321 (385)
T ss_pred HHHhCcccc-ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCCC-CCCCCCEEEEEEC----
Confidence 763221111 1223467778888888876643 346677777777787777664 2221 1122344444431
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCC-------CCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+++||.+.+.. ...++ +++.++++++++++++|++++++
T Consensus 322 ---------~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 322 ---------DEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ---------CHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 22345789999999999986431 12334 35678999999999999998864
No 185
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=1.8e-25 Score=205.52 Aligned_cols=319 Identities=14% Similarity=0.094 Sum_probs=190.2
Q ss_pred CcHHHHHHHHHHHHcC----CCC-CCCChhHHHHHHHHHhhC---C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKG----TSF-GAPCLLENVLAEMVISAV---P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~----~~~-~~~~~~~~~l~~~l~~~~---~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+.+++.+.+.+. ... +.+.....+|++.+++++ . +++++++|+|+++++...+.+. .+++.|++
T Consensus 47 ~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~~l~---~~gd~Vlv 123 (402)
T TIGR03542 47 LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQSLF---GSDNTVAV 123 (402)
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHHHhc---CCCCEEEE
Confidence 3567888888877653 112 335667788999999864 3 5789999999999998754332 46788999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|......+...+..++.. .++. ..+++.++.++-+.+...+.+. ++++++++...+|++|.+++ .
T Consensus 124 ~~P~y~~~~~~~~~~g~~~~~~-----~~~~----~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~l~nP~NPTG~~~s-~ 192 (402)
T TIGR03542 124 QDPVYPAYVDSNVMAGRAGVLD-----DDGR----YSKITYLPCTKENNFIPDLPEE-PKIDIIYLCSPNNPTGTVLT-K 192 (402)
T ss_pred eCCCCcchHHHHHHcCCccccc-----cccc----cceEEEeecchhhCCCCCcccc-CCceEEEEeCCCCCCCccCC-H
Confidence 9999988755444333211110 0000 0012222221000000001111 24566666544555666555 4
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccc---cc-cCCCcchhhhhhhcc-CCccceeeeehHHHH-------
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQ---EY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM------- 226 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~---~~-~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~------- 226 (368)
+.+++|+++|++||+++|+||+|.+| ..+. .... +. .+....+.||||.++ +|+|+||++++++++
T Consensus 193 ~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~ 272 (402)
T TIGR03542 193 EQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSV 272 (402)
T ss_pred HHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhH
Confidence 45999999999999999999999988 4332 1111 11 122344679999998 899999999988776
Q ss_pred -HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC--H----HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEE
Q 017633 227 -EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG--T----YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 299 (368)
Q Consensus 227 -~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~--~----~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (368)
..+.. .......+.+.+++.++...++ +.. + .+.+.++++.+.+.|+ +.+.....+..+.++|
T Consensus 273 ~~~~~~---~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~~~~~~~~~~f~~ 342 (402)
T TIGR03542 273 IQDWER---RQCTKFNGASYPVQRAAEAAYA---GEGLQPILEAISYYMENARILRKALE----AAGFKVYGGEHAPYLW 342 (402)
T ss_pred HHHHHH---HhhhcccCCCHHHHHHHHHHHc---CcchhHHHHHHHHHHHHHHHHHHHHH----hcCceecCCCceeEEE
Confidence 22210 0111222467777777665554 211 1 2223344444444443 3342222222456778
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
+.+. ...+..++++.|+ ++||.+.++.. .++|+++..+++++++++++|+++|
T Consensus 343 v~l~-------------~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 343 VKTP-------------EGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL 402 (402)
T ss_pred EECC-------------CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence 8763 2223467888887 46999999742 2456676678999999999998763
No 186
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=9.7e-25 Score=201.50 Aligned_cols=304 Identities=12% Similarity=0.101 Sum_probs=185.9
Q ss_pred hHHHHHHHHHhhC----C-----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccC
Q 017633 34 LENVLAEMVISAV----P-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 104 (368)
Q Consensus 34 ~~~~l~~~l~~~~----~-----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (368)
...+|++++++++ + +++++++|+|++++++.++.+.. .++|.|++..+.|.+.........+.++...+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~ 173 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRTGVKIVPIH 173 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhcCCcEEEEEe
Confidence 3455555555543 2 46899999999999999886552 46789999998888764433222343332222
Q ss_pred CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeh
Q 017633 105 LPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De 181 (368)
....+++. .|++++++++++. ..+++++++...+|++|.++ +++.+++|.++|++|++++|+||
T Consensus 174 ~~~~~~f~------------~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~-s~e~l~~l~~~~~~~~i~lI~DE 240 (447)
T PLN02607 174 CDSSNNFQ------------VTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATV-QRSVLEDILDFVVRKNIHLVSDE 240 (447)
T ss_pred CCCCCCCc------------CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCCEEEEec
Confidence 21111111 1789999988741 13566555543344455544 45559999999999999999999
Q ss_pred hhhch-hcccCc-ccc----ccC------CCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHHH
Q 017633 182 VMTGF-RLAYGG-AQE----YFG------VTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLA 247 (368)
Q Consensus 182 ~~~~~-~~g~~~-~~~----~~~------~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~ 247 (368)
+|.++ +.+..+ +.. ..+ ...-+.+|||.|+ +|+|+||+++ ++++.+.+.... .....+.++
T Consensus 241 iYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~-----~~~~~s~~~ 315 (447)
T PLN02607 241 IYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-----SFTLVSSQT 315 (447)
T ss_pred cccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh-----hcCCCCHHH
Confidence 99875 332211 111 011 1112458999999 8999999987 677766665211 111346666
Q ss_pred HHHHHHHHHHHccCCHH-HHHHHHHHHHHH---HHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 248 MTAGIHTLKRLKEPGTY-EYLNKITGELTQ---GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 248 ~~a~~~~l~~~~~~~~~-~~~~~~~~~l~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
+.++...++ ++++. +.+.++++++++ .+.+.+.+.+.+...+..|.++|+++..... .+......+
T Consensus 316 q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~-------~~~~~~e~~ 385 (447)
T PLN02607 316 QHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLE-------TPTREGELA 385 (447)
T ss_pred HHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhc-------CCCchhHHH
Confidence 666554443 44443 233333333333 3444444455444445567888988743110 011122356
Q ss_pred HHHHHHH-cCeeecCCCC------CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 324 FYRGMLE-EGVYFAPSQF------EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 324 ~~~~l~~-~Gi~~~~~~~------~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
+.+.|++ +||.+.||.. .++|+++.. +++++++++++|.+++++
T Consensus 386 l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 386 LWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 7777775 6999999742 245677774 899999999999998853
No 187
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=5e-25 Score=199.38 Aligned_cols=307 Identities=17% Similarity=0.152 Sum_probs=201.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+++++.+.+..... ++.....++++.++++++ +++++++++|+++++..++... ..+++.|++..++|...
T Consensus 36 ~~~~~~~a~~~~~~~~~~--y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~--~~~gd~Vli~~p~y~~~ 111 (352)
T PRK03321 36 PLPSVRAAIARAAAGVNR--YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT--AGPGDEVIFAWRSFEAY 111 (352)
T ss_pred CCHHHHHHHHHHHHhcCc--CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh--cCCCCEEEeCCCCHHHH
Confidence 456899999887764333 355678899999999997 6789999988888888777654 35678899887776543
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
. ......|..+...+.....+. |++++++.++ +++++++++..++++|.+++ .+++.+
T Consensus 112 ~-~~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~----~~~l~~ 169 (352)
T PRK03321 112 P-ILVQVAGATPVQVPLTPDHTH--------------DLDAMAAAIT---DRTRLIFVCNPNNPTGTVVT----PAELAR 169 (352)
T ss_pred H-HHHHHcCCEEEEccCCCCCCC--------------CHHHHHHhhc---cCCCEEEEeCCCCCcCCCcC----HHHHHH
Confidence 2 222333333222111111111 7899998886 35566666555666788777 566666
Q ss_pred HHHH--hCCEEEEehhhhch-hcccC-ccccccC---CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccccc
Q 017633 169 ITKE--NGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 169 l~~~--~~~~li~De~~~~~-~~g~~-~~~~~~~---~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t 240 (368)
+|++ +++++|+||+|.++ ..+.. ....... ....+.||||.++ +|+|+||+++++++++.+... ..+
T Consensus 170 l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~-----~~~ 244 (352)
T PRK03321 170 FLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKV-----AVP 244 (352)
T ss_pred HHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHh-----cCC
Confidence 6665 69999999999888 43321 1111111 1223458999999 899999999999999888742 245
Q ss_pred CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 241 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
++.+.+++.++.++++.. +.+.++.++..+ -++.+.+.+...+.. .....++++|+.+. ..
T Consensus 245 ~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~-~r~~~~~~L~~~~~~-~~~~~g~~i~i~l~---------------~~ 305 (352)
T PRK03321 245 FSVNSLAQAAAIASLAAE--DELLERVDAVVA-ERDRVRAALRAAGWT-VPPSQANFVWLPLG---------------ER 305 (352)
T ss_pred CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHH-HHHHHHHHHHHCCCc-cCCCCCCEEEEeCC---------------CC
Confidence 677889988887777522 223333322222 223344444434432 22334677777652 12
Q ss_pred HHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..++++.|.++||.+.+.+...+|+.+ .+.+++++++++|+++++.
T Consensus 306 ~~~~~~~l~~~gI~v~~~~~~~iRi~~-~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 306 TADFAAAAAEAGVVVRPFAGEGVRVTI-GAPEENDAFLRAARAWRAG 351 (352)
T ss_pred HHHHHHHHHHCCEEEEccCCCcEEEee-CCHHHHHHHHHHHHHHhcc
Confidence 468899999999999987655566664 5889999999999998764
No 188
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=1.7e-25 Score=203.62 Aligned_cols=318 Identities=16% Similarity=0.154 Sum_probs=196.2
Q ss_pred CcHHHHHHHHHHHH----cC-CCCCCCChhHHHHHHHHHhhCC-------CCC-eEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 10 SYLQVLAALGETMK----KG-TSFGAPCLLENVLAEMVISAVP-------SIE-MVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 10 ~~~~v~~a~~~~~~----~~-~~~~~~~~~~~~l~~~l~~~~~-------~~~-~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
++|.+.+++.+..+ .. ...+.+.....+|++.++++++ +.+ .+++++|..+++..++.+.. ..+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~-~~~~~ 94 (363)
T PF00155_consen 16 QNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLK-INPGD 94 (363)
T ss_dssp SSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHH-SSTTS
T ss_pred cccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccc-ccccc
Confidence 44555555544432 12 2334455668999999999875 356 78888644455544444442 34678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-C--CeEEEEEcccCCCC
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-G--EIAAIILEPVVGNS 153 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~--~~~~~~~~~~~~~~ 153 (368)
.|++..+.|...... +...|.++...++...... ..|+++|++.+++.+ + +++++++...++++
T Consensus 95 ~vlv~~P~y~~~~~~-~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 95 TVLVPDPCYPSYIEA-ARLLGAEVIPVPLDSENDF------------HLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp EEEEEESSSTHHHHH-HHHTTSEEEEEEEEETTTT------------EETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred cceecCCcccccccc-ccccCceeeeccccccccc------------cccccccccccccccccccccceeeeccccccc
Confidence 899988888765433 3333443322111100110 118999999999631 1 35666666666667
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCc-c-ccccCCC---cchhhhhhhcc-CCccceeeeehHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-A-QEYFGVT---PDLTTLGKIIG-GGLPVGAYGGRRDIM 226 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~-~~~~~~~---~di~s~sK~~~-~G~~iG~v~~~~~~~ 226 (368)
|..++.++ +++|+++|++||+++|+||+|.++ .....+ . ....... .-+.|+||.++ +|+|+||++++++++
T Consensus 162 G~~~~~~~-l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~ 240 (363)
T PF00155_consen 162 GSVLSLEE-LRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELI 240 (363)
T ss_dssp TBB--HHH-HHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHH
T ss_pred cccccccc-ccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhh
Confidence 76665444 999999999999999999999887 322211 1 1122222 23458999999 899999999999888
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
+.+.. ... .+..+.+.+.++.+.+..... ..+.++.++..+..++.+.+.+.+.+........+.+.|..+.
T Consensus 241 ~~l~~---~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-- 313 (363)
T PF00155_consen 241 ERLRR---FQR--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLD-- 313 (363)
T ss_dssp HHHHH---HHH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEES--
T ss_pred hhhhh---ccc--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcc--
Confidence 88873 222 223366666666666553321 1133444444444444455555445555444445666666652
Q ss_pred CCcccchhcccccHHHHHHHHHHHHc-CeeecCCCCC----cccccc-CCCHHHHHHHHHHH
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFE----AGFTSL-AHSSDDIQHTITAA 361 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~----~~~~~~-~~~~~~i~~~~~~l 361 (368)
..+..++++.|+++ ||.+.++..+ .+|+++ ..+++++++++++|
T Consensus 314 ------------~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 314 ------------PNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp ------------HHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred ------------cchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 22568899999998 9999997433 456666 78999999999886
No 189
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=8.6e-25 Score=198.21 Aligned_cols=313 Identities=13% Similarity=0.030 Sum_probs=194.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
|+++ .++.+++++.+.+.....| +.....+|++.++++++ +++++++|+|+++++..+++++ .+++.|++..+
T Consensus 32 n~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l---~~g~~vlv~~P 105 (360)
T PRK07392 32 NPLG-PPESVIAAIQSALSALRHY--PDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL---AQLRAVYLITP 105 (360)
T ss_pred CCCC-CCHHHHHHHHHHHHHhhcC--CCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh---CCCCeEEEECC
Confidence 3444 6678999988877653333 33345799999999997 7889999999999999888764 24568999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|......+.. .|..+.........+.. ....+++++++.. ++++++++...+|++|.+++ .
T Consensus 106 ~y~~~~~~~~~-~g~~~~~v~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~l~nP~NPTG~~~~----~ 167 (360)
T PRK07392 106 AFGDYRRALRA-FGATVKELPLPLDQPSP---------GLTLRLQTLPPQL----TPNDGLLLNNPHNPTGKLWS----R 167 (360)
T ss_pred CcHHHHHHHHH-cCCeEEEEecccccCCc---------ccccCHHHHHHhc----cCCCEEEEeCCCCCCCCCcC----H
Confidence 99876544443 34433222111111110 0001455554432 24455554444566777777 6
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCcc-c---cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGA-Q---EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~---~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
++|.++++++++ +|+||+|.+| ..+.... . +.......+.||||.++ +|+|+||+++++++++.+....
T Consensus 168 ~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~---- 242 (360)
T PRK07392 168 EAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR---- 242 (360)
T ss_pred HHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhC----
Confidence 778888889985 6669999988 5432111 1 11122234568999999 9999999999998888876322
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
..++.+.+++.++.++++ +..+.++.++..+..++.+.+.+...+.....++.++++|+.+. .
T Consensus 243 -~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~-------------~ 305 (360)
T PRK07392 243 -DPWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQ-------------G 305 (360)
T ss_pred -CCCCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcC-------------C
Confidence 346778899888877775 33344444444444444444444444222233345667676542 1
Q ss_pred cHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 318 TTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 318 ~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+..+++..++ ++||.+.++.. .++|+++.. .++.+++.+.|++++.
T Consensus 306 --~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 306 --SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT-EAENQRLLEALAAILA 358 (360)
T ss_pred --CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhh
Confidence 2467887764 57999998742 234555444 4455677777776653
No 190
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=8.6e-25 Score=185.21 Aligned_cols=329 Identities=13% Similarity=0.066 Sum_probs=210.3
Q ss_pred ceeccCCCcH----------HHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHH
Q 017633 3 QLIILFPSYL----------QVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMG 64 (368)
Q Consensus 3 ~~~~~g~~~~----------~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~ 64 (368)
.+++++||+| +..+|+..++..+-.. |.|+......++++++++ + ..++|++|+|.++|++.
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~ 141 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIEL 141 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHH
Confidence 5678888777 6788888888775433 346666777777888874 2 37899999999999999
Q ss_pred HHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE
Q 017633 65 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 143 (368)
Q Consensus 65 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~ 143 (368)
++..+. .++.+|+++.++|.-+...+. -.+..+.+..+ |...+=. |++.+|.++.+ +|++
T Consensus 142 ~i~~LA--~p~aNILlPrPGfp~Y~~~a~-~~~lEVR~ydlLPe~~weI-------------DL~~veal~DE---NT~A 202 (447)
T KOG0259|consen 142 AISSLA--NPGANILLPRPGFPLYDTRAI-YSGLEVRYYDLLPEKDWEI-------------DLDGVEALADE---NTVA 202 (447)
T ss_pred HHHHhc--CCCCceecCCCCCchHHHhhh-hcCceeEeecccCccccee-------------chHHHHHhhcc---CeeE
Confidence 996552 578899999998875433222 22333322222 2222211 89999999984 4554
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccC-CCcc--hhhhhhhcc-CCccce
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG-VTPD--LTTLGKIIG-GGLPVG 217 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~-~~~d--i~s~sK~~~-~G~~iG 217 (368)
+++...+|+.|.+..... |++|+++|+++++++|.||+|.++ +.+.. ..+..+. ..|- +.++||.+- +|||+|
T Consensus 203 ivviNP~NPcGnVys~~H-L~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlG 281 (447)
T KOG0259|consen 203 IVVINPNNPCGNVYSEDH-LKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLG 281 (447)
T ss_pred EEEeCCCCCCcccccHHH-HHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceee
Confidence 444444444555555444 999999999999999999999887 55544 3333333 3443 357899998 999999
Q ss_pred eeeehHH--------HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCH----HHHHHHHHHHHHHHHHHHHHhc
Q 017633 218 AYGGRRD--------IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT----YEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 218 ~v~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
|++..+. ..+.+. . ...-+..++++-|+|.=.-++.- .+++ ...++.+.+...++|+++ .
T Consensus 282 Wi~~hD~~gvf~~~~~~q~~~---~-~~~~~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~I---P 353 (447)
T KOG0259|consen 282 WIALHDPRGVFRDTKVVQGIK---N-FLDIIPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDI---P 353 (447)
T ss_pred eEEEecccccccchHHHHHHH---H-HHhccCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcC---C
Confidence 9977541 112222 1 11234455666666644433311 1333 445666666666666664 1
Q ss_pred CCceEEeeccc-eEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCC----CCccccccCCCHHHHHHHHH
Q 017633 286 GHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTIT 359 (368)
Q Consensus 286 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~ 359 (368)
++...+.+.|. +.++.+.-+... +-.+..+|+..|. |+.+++-||. .+++|+.+.+..+.++++++
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s~~~--------~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~ 425 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLSLFP--------DIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFS 425 (447)
T ss_pred CcccCcCCCcceEEEeccchhhhc--------cccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHH
Confidence 22213333333 344444332221 2233477887775 5689998873 34567889999999999999
Q ss_pred HHHHHHhh
Q 017633 360 AAEKVLRQ 367 (368)
Q Consensus 360 ~l~~~l~~ 367 (368)
+|++++.+
T Consensus 426 Rik~Fc~R 433 (447)
T KOG0259|consen 426 RIKEFCDR 433 (447)
T ss_pred HHHHHHHh
Confidence 99998754
No 191
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.5e-25 Score=200.69 Aligned_cols=278 Identities=15% Similarity=0.034 Sum_probs=179.6
Q ss_pred CCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 30 APCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
||... .+|++.++++++ . +++|++++|+++++.....++ .++ +|++..++|..+...+.. .|..
T Consensus 51 Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~~---~~g-~v~v~~P~y~~y~~~~~~-~g~~-------- 116 (339)
T PRK06959 51 LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPALL---PRG-RVGIAPLAYSEYAPAFAR-HGHR-------- 116 (339)
T ss_pred CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHhc---CCC-eEEEcCCCcHHHHHHHHH-CCCE--------
Confidence 45444 899999999998 3 589999999999988654432 344 488888888775433332 2222
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
++.++.++ +.+++ ....+++++|+ |++|.+.+.+ .++++++.|++++.++|+||+|.+|
T Consensus 117 -----------~~~v~~~~-~~~~~------~~~~v~l~nPn-NPTG~~~s~~-~l~~l~~~~~~~~~~vI~DEay~~~~ 176 (339)
T PRK06959 117 -----------VVPLDEAA-DTLPA------ALTHLIVVNPN-NPTAERLPAA-RLLRWHAQLAARGGTLIVDEAFADTL 176 (339)
T ss_pred -----------EEeecccc-hhccc------cCCEEEEeCCC-CCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCCccCC
Confidence 22222212 22111 12356777775 4556655544 4999999999999999999999887
Q ss_pred hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 187 RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
................+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++.++++ +.++.+
T Consensus 177 ~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~-----~~~~vs~~~q~a~~~~L~---~~~~~~ 248 (339)
T PRK06959 177 PAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDAL-----GAWTVSGPARHAVRAAFA---DAAWQA 248 (339)
T ss_pred CcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhC---cHHHHH
Confidence 3211111111111233569999999 9999999999999998887422 345678888888877775 333444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-Cccc
Q 017633 266 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGF 344 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~ 344 (368)
+.++..+..++.+.+.+.+.++.. ...+.++|+.+. +..++.+.|.++||.++..+. .++|
T Consensus 249 ~~~~~~~~~r~~l~~~L~~~g~~~--~~~~~f~~~~~~----------------~~~~l~~~l~~~GI~vr~~~~~~~lR 310 (339)
T PRK06959 249 AMRERLAADGARLAALLRAHGFAV--HATPLFSWTDDP----------------RAAALHAALARRGIWTRYFAPPPSVR 310 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCc--cCcceEEEEeCC----------------CHHHHHHHHHhCCeEEEECCCCCeEE
Confidence 444444444444444444444322 123455566531 246789999999999987643 3566
Q ss_pred cccCCCHHHHHHHHHHHHHHHhh
Q 017633 345 TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 345 ~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++..+.+++++++++|+++++.
T Consensus 311 isi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 311 FGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred EECCCCHHHHHHHHHHHHHHHHH
Confidence 77656788999999999987653
No 192
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=9e-25 Score=195.97 Aligned_cols=297 Identities=14% Similarity=0.074 Sum_probs=189.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+.+++.+++.......|+.....+++++++++++ +++++++|+|+++++..++... +++.|++..++|...
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~----~gd~V~v~~P~y~~~ 107 (337)
T PRK03967 32 LPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF----EGKHIVITPPTFGMY 107 (337)
T ss_pred CCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh----CCCeEEEeCCChHHH
Confidence 55789999988875432334456678899999999997 7899999999999998776643 478899999988743
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
.. .....|..+....... .... |++++++.+. +++++++...+|++|.+++ .+++.+
T Consensus 108 ~~-~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~~~----~~~~v~~~~P~NPtG~~~~----~~~l~~ 164 (337)
T PRK03967 108 SF-YAKLNGIPVIDVPLKE-DFTI-------------DGERIAEKAK----NASAVFICSPNNPTGNLQP----EEEILK 164 (337)
T ss_pred HH-HHHHcCCeEEEeecCC-CCCc-------------CHHHHHHhcc----CCCEEEEeCCCCCCCCCCC----HHHHHH
Confidence 32 2333344332221111 1111 7888877653 3444444444555677777 567777
Q ss_pred HHHHhCCEEEEehhhhchhcccCc-cccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHH
Q 017633 169 ITKENGALLIFDEVMTGFRLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 246 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~~~g~~~-~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~ 246 (368)
+++ +++++|+||+|.+|...... ..+.......+.||||.++ +|+|+||+++++++++.+.... ..++.+.+
T Consensus 165 i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~-----~~~~~~~~ 238 (337)
T PRK03967 165 VLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIK-----PPFSLNIL 238 (337)
T ss_pred HHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhc-----CCCCCCHH
Confidence 774 79999999999887211111 1111122234569999999 9999999999999988887432 23466788
Q ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 247 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 247 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
++.++..+++ +.++..+..+.....++.+.+.+.+. ..+..+.++|+.+ .+.+
T Consensus 239 ~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~--------------------~~~~ 291 (337)
T PRK03967 239 TMKIVRLALD---HYDLIEERIDYIIKERERVRRELGEY----AYPSDANFLLLKL--------------------DAYD 291 (337)
T ss_pred HHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhH--------------------HHHH
Confidence 8888877775 22232222222223333444333332 2234566666542 2678
Q ss_pred HHHHcCeeecCCC---CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 327 GMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 327 ~l~~~Gi~~~~~~---~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.|+++||.++++. ..++|+++. +.++.+++++.|+++.+.
T Consensus 292 ~l~~~gi~v~~~~~~~~~~~Ri~~~-~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 292 YLLENGIVVRKLSGRLEGHIRVTVG-KREENDEFIKALKEIKEG 334 (337)
T ss_pred HHHHCCEEEEeCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 8999999997653 223455533 567888999999887654
No 193
>PLN02231 alanine transaminase
Probab=99.94 E-value=1.1e-24 Score=204.47 Aligned_cols=334 Identities=13% Similarity=0.098 Sum_probs=197.3
Q ss_pred cHHHHHHHHHHHHc--C--CCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 11 YLQVLAALGETMKK--G--TSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 11 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
+.+++++..+.+.. . ...|.++....+|++.+++++ + ++++|++|+|+++|+..++.++.. .++|.|+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~~gd~Vl 220 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEKDGIL 220 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-CCCCEEE
Confidence 44677777676654 2 222445566777888777765 2 468999999999999999987632 3578999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---CCeEEEEEcccCCCCCcc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~~~~~~~~~~~~~~~g~~ 156 (368)
+..++|..+...+. ..|..+...++....++. -|+++|++.+++.. .+++++++...+|++|.+
T Consensus 221 i~~P~Y~~y~~~~~-~~g~~~v~~~l~~~~~~~------------~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~v 287 (534)
T PLN02231 221 CPIPQYPLYSASIA-LHGGTLVPYYLDEATGWG------------LEISELKKQLEDARSKGITVRALVVINPGNPTGQV 287 (534)
T ss_pred EeCCCChhHHHHHH-HcCCEEEEEecCcccCCC------------CCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcC
Confidence 99999987654443 333333222221111111 08999999987421 146654444334556665
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hc-ccCc-ccccc----CC------Ccchhhhhhhc-c-CCccceeeee
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-AQEYF----GV------TPDLTTLGKII-G-GGLPVGAYGG 221 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~-g~~~-~~~~~----~~------~~di~s~sK~~-~-~G~~iG~v~~ 221 (368)
++ .+.+++|+++|++||++||+||+|.++ +. +..+ .+... +. ...+.||||.+ + +|+|+||+++
T Consensus 288 ls-~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 288 LA-EENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred CC-HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 55 555999999999999999999999887 53 3221 22111 11 12345899987 5 7999999965
Q ss_pred ---hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHH--ccC----------CHHHHHHHHHHHHHHHHHHHHHhcC
Q 017633 222 ---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KEP----------GTYEYLNKITGELTQGIIDAGKKAG 286 (368)
Q Consensus 222 ---~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~--~~~----------~~~~~~~~~~~~l~~~l~~~~~~~~ 286 (368)
++++++.+.... ..+.+.+.+++.++..+++.- .++ .+++.++++++.+.+.|++. .+
T Consensus 367 ~~~~~~l~~~l~k~~----~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~---~g 439 (534)
T PLN02231 367 TGFTSDVREQIYKVA----SVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL---EG 439 (534)
T ss_pred ecCCHHHHHHHHHHH----hhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC
Confidence 677887775321 123344666666665555310 001 12334455555554444432 13
Q ss_pred CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCCC-------ccccccCCCHHHHHHHH
Q 017633 287 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFE-------AGFTSLAHSSDDIQHTI 358 (368)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~-------~~~~~~~~~~~~i~~~~ 358 (368)
.....+..+.++|..+.-+. ......+.........++..|+ +.||.+.||..+ ++|+++..+++++++++
T Consensus 440 i~~~~p~Ggfylw~~l~lp~-~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal 518 (534)
T PLN02231 440 VTCNKAEGAMYLFPRIHLPQ-KAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIV 518 (534)
T ss_pred ceecCCCeeeEEeccccCcH-HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHH
Confidence 33233334445553332100 0000000000011234667676 569999997422 25677778999999999
Q ss_pred HHHHHHHhh
Q 017633 359 TAAEKVLRQ 367 (368)
Q Consensus 359 ~~l~~~l~~ 367 (368)
++|++++++
T Consensus 519 ~RL~~~~~~ 527 (534)
T PLN02231 519 SRLTEFHKS 527 (534)
T ss_pred HHHHHHHHH
Confidence 999988754
No 194
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2e-25 Score=199.85 Aligned_cols=296 Identities=12% Similarity=0.077 Sum_probs=185.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
.+|.+++++.+++.......|+.....+|++.++++++ ++++|++|+|+++++..++... +.|++.+++|
T Consensus 33 ~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~------d~v~v~~P~y 106 (335)
T PRK14808 33 FPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF------DRSVFFPPTY 106 (335)
T ss_pred CCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh------CcEEECCCCH
Confidence 67789999988765422222344568899999999985 4789999999999999998754 4688889888
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
......+... |.++... +..... .++.. .+. .++++++...+|++|.+++ .++
T Consensus 107 ~~~~~~~~~~-g~~~~~v--~~~~~~--------------~~~~~--~~~----~~~~i~i~nP~NPTG~~~s----~~~ 159 (335)
T PRK14808 107 SCYRIFAKAV-GAKFLEV--PLTKDL--------------RIPEV--NVG----EGDVVFIPNPNNPTGHVFE----REE 159 (335)
T ss_pred HHHHHHHHHc-CCeEEEe--cCCCcC--------------CCChh--Hcc----CCCEEEEeCCCCCCCCCcC----HHH
Confidence 8765444443 3332221 111111 11111 122 2355555444455676676 445
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
+.+++ ++++++|+||+|.+|..... ..........-+.||||.++ +|+|+||+++++++++.+.... ..++.
T Consensus 160 l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~-----~~~~~ 233 (335)
T PRK14808 160 IERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR-----LPFNV 233 (335)
T ss_pred HHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhc-----CCCCC
Confidence 55555 58999999999988721111 11122223344568999999 8999999999999988886422 23566
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
+.+++.++.++++.. ++.++..+.....++.+.+.+...+.. ...+.++++|+.+. ..+..+
T Consensus 234 ~~~~q~a~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~g~~-~~~~~g~f~~~~l~--------------~~~~~~ 295 (335)
T PRK14808 234 SYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALREMGYR-ITDSRGNFVFIFME--------------KEEKER 295 (335)
T ss_pred CHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHHHHHHHHCCCE-ECCCCCeEEEEeCC--------------CccHHH
Confidence 788888877777521 222222222222234444444444432 33456778888762 112367
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHH
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
+.+.|.++||.++... ..+|++ ..+.++++++++.|++.
T Consensus 296 ~~~~l~~~Gi~V~~~~-~~~Ris-i~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 296 LLEHLRAKNIAVRSFR-EGVRIT-IGKREENDMILKELEVF 334 (335)
T ss_pred HHHHHHHCCeEEEECC-CCeEEe-cCCHHHHHHHHHHHHhh
Confidence 8999999999999653 345555 44678899999988753
No 195
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=1.3e-25 Score=200.91 Aligned_cols=275 Identities=19% Similarity=0.141 Sum_probs=184.4
Q ss_pred CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 31 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++....+++++++++++ +++++++++|+++++..+..++ .++ +|++.+++|+..... +...|
T Consensus 45 ~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l---~~g-~vl~~~p~y~~~~~~-~~~~g------------ 107 (330)
T TIGR01140 45 PDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL---APG-RVLVLAPTYSEYARA-WRAAG------------ 107 (330)
T ss_pred CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh---CCC-eEEEeCCCcHHHHHH-HHHcC------------
Confidence 43335999999999998 6789999998888888865543 344 688888888765322 22222
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~ 188 (368)
.+++.++ |++++++.++ +...+++++| +|++|.++ +.+.+++|+++|++||+++|+||+|.++ ..
T Consensus 108 -------~~~~~~~--d~~~l~~~~~---~~~~v~i~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 173 (330)
T TIGR01140 108 -------HEVVELP--DLDRLPAALE---ELDVLVLCNP-NNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPD 173 (330)
T ss_pred -------CEEEEeC--CHHHHHhhcc---cCCEEEEeCC-CCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCc
Confidence 2233344 7888988875 2334555555 45566655 4555999999999999999999999877 32
Q ss_pred ccCccc-cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 189 AYGGAQ-EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 189 g~~~~~-~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
...... +..+...-+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++...++ +.++.++
T Consensus 174 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-----~~~~~s~~~q~~~~~~l~---~~~~~~~ 245 (330)
T TIGR01140 174 ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREAL-----GPWTVNGPARAAGRAALA---DTAWQAA 245 (330)
T ss_pred cchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcC-----CCCCchHHHHHHHHHHHh---chHHHHH
Confidence 111111 11122222458999999 8999999999999888887422 345667777777666654 4556556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-----
Q 017633 267 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE----- 341 (368)
Q Consensus 267 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~----- 341 (368)
.+++.+..++.+.+.+.+.+.....++.+.+.|+.+. ...++++.|+++||.+.++..+
T Consensus 246 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~----------------~~~~l~~~l~~~gi~v~pg~~f~~~~~ 309 (330)
T TIGR01140 246 TRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP----------------DAAALHEALARRGILIRDFDNFPGLDP 309 (330)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC----------------CHHHHHHHHHHCCEEEEECCCCCCCCC
Confidence 6666666666666666666533233455667777642 1368999999999999997432
Q ss_pred -ccccccCCCHHHHHHHHHHH
Q 017633 342 -AGFTSLAHSSDDIQHTITAA 361 (368)
Q Consensus 342 -~~~~~~~~~~~~i~~~~~~l 361 (368)
++|+.+....++ ++++.+|
T Consensus 310 ~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 310 RYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred CEEEEEecCHHHH-HHHHHhh
Confidence 356666665555 7777765
No 196
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.94 E-value=4e-25 Score=202.87 Aligned_cols=313 Identities=15% Similarity=0.075 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHcCCC-CCCCChhHHHHHHHHHhhCC-------CCCeE--EEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 12 LQVLAALGETMKKGTS-FGAPCLLENVLAEMVISAVP-------SIEMV--RFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-------~~~~v--~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+.+.+++.+.+..... .+.+.....+|++++++++. +++++ ++|+|+++|+..++.+.....++|.|++.
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~ 126 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVS 126 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEEC
Confidence 5677777776543222 23455667888888888752 35666 99999999999998655333578899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCC--CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+++|.++...+. ..|..+...++ +...++ |++++++.+++.+++++++++.+.+|++|.++ +
T Consensus 127 ~P~y~~~~~~~~-~~g~~~v~v~~~~~~~~~~--------------d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~-s 190 (396)
T PRK09257 127 DPTWPNHRAIFE-AAGLEVKTYPYYDAATKGL--------------DFDAMLADLSQAPAGDVVLLHGCCHNPTGADL-T 190 (396)
T ss_pred CCCcccHHHHHH-HcCCcEEEEeccccccCcc--------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC-C
Confidence 999988754444 34443332221 111122 89999998875433344444444444456555 5
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hc-cc-Cccc---ccc-CCCcchhhhhhhcc-CCccceeeee---hHH----
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RL-AY-GGAQ---EYF-GVTPDLTTLGKIIG-GGLPVGAYGG---RRD---- 224 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~-g~-~~~~---~~~-~~~~di~s~sK~~~-~G~~iG~v~~---~~~---- 224 (368)
.+.+++|+++|++||+++|+||+|.++ .. +. .... ... .....+.||||.++ +|+|+||+++ +++
T Consensus 191 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~ 270 (396)
T PRK09257 191 PEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADR 270 (396)
T ss_pred HHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHH
Confidence 555999999999999999999999887 32 11 1111 111 12344679999999 6999999863 333
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc------c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK------E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~------~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
+...+.. .......+++.+++.++...++.-. + +.+++.++++++.+.+.|++...........+..|.
T Consensus 271 ~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~ 347 (396)
T PRK09257 271 VLSQLKA---TIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGM 347 (396)
T ss_pred HHHHHHH---HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceE
Confidence 3333321 1122333456777776665553110 0 112333444444444444443110012222344556
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHH-HHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHH
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVL 365 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l 365 (368)
++|+.+. .+++..+ .++||.+.+.+ ++.+. .+++++++++++|++++
T Consensus 348 ~~w~~l~------------------~~~~~~l~~~~~V~~~p~~----ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 348 FSYSGLT------------------PEQVDRLREEFGVYAVGSG----RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred EEecCCC------------------HHHHHHHHHcCCEEEcCCC----eEEEeeCCHHHHHHHHHHHHhhC
Confidence 6666541 2344445 56799998863 66664 79999999999998763
No 197
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.4e-25 Score=200.76 Aligned_cols=289 Identities=15% Similarity=0.113 Sum_probs=183.6
Q ss_pred CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 29 GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
.||.....+|++++++.++ ++++|++++|+++++..+++.+.. ++++.|++..++|..+.. .....|.++...+...
T Consensus 53 ~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~-~g~~~vli~~P~y~~y~~-~~~~~G~~~~~v~~~~ 130 (351)
T PRK01688 53 RYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYCPPTYGMYSV-SAETIGVEIRTVPTLD 130 (351)
T ss_pred cCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC-CCCCEEEEcCCCHHHHHH-HHHHcCCEEEEeecCC
Confidence 3566667899999999998 889999999999999999976622 234789998888876432 2333344332222211
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
.... |++++++++. +++++++...+|++|.+.+.++ ++++++.|++ +.++|+||+|.+|
T Consensus 131 ~~~~--------------d~~~l~~~~~----~~~lv~l~nPnNPTG~~~~~~~-l~~l~~~~~~-~~~vivDEay~~f~ 190 (351)
T PRK01688 131 NWQL--------------DLPAIADNLD----GVKVVYVCSPNNPTGNLINPQD-LRTLLELTRG-KAIVVADEAYIEFC 190 (351)
T ss_pred CCCC--------------CHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHH-HHHHHHhCCC-CcEEEEECchhhcC
Confidence 1111 7888888763 4555555444555666665444 8888888876 6889999999887
Q ss_pred hcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 187 RLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 187 ~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
..... ..........-+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++.++++.. ..++.
T Consensus 191 ~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~-----~~~~v~~~~~~~a~~~L~~~-~~~~~ 264 (351)
T PRK01688 191 PQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVI-----APYPLSTPVADIAAQALSPQ-GIAAM 264 (351)
T ss_pred CCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHhcc-hHHHH
Confidence 22111 01112222233569999999 8999999999999988887432 34566777777776666411 01222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC----
Q 017633 265 EYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---- 339 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---- 339 (368)
++..+.....++.+.+.+...+ .....+..++++++.+. +..++++.|+++||.++.++
T Consensus 265 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----------------~~~~l~~~L~~~gi~vr~~~~~~~ 328 (351)
T PRK01688 265 RERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----------------ASSAVFKSLWDQGIILRDQNKQPG 328 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----------------CHHHHHHHHHHCCeEEEECCCcCC
Confidence 2222222223344444444443 22234555677776542 14789999999999998653
Q ss_pred -CCccccccCCCHHHHHHHHHHHH
Q 017633 340 -FEAGFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 340 -~~~~~~~~~~~~~~i~~~~~~l~ 362 (368)
..++|+++. +++++++++++|+
T Consensus 329 ~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 329 LSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred CCCeEEEeCC-CHHHHHHHHHhhC
Confidence 234556544 6799999998873
No 198
>PRK08637 hypothetical protein; Provisional
Probab=99.94 E-value=2.2e-24 Score=197.37 Aligned_cols=322 Identities=13% Similarity=0.060 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhCC------C---CCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 13 QVLAALGETMKKG----TSFGAPCLLENVLAEMVISAVP------S---IEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 13 ~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~------~---~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
-+++++.+.+.+. ...+.+.....+|++.+++++. . .+++++|+|+++++..++.++. .++|.|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~--~~gd~Vl 97 (388)
T PRK08637 20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV--DQGDTVL 97 (388)
T ss_pred chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc--CCCCEEE
Confidence 4555555544431 1223344556778888776541 1 2578999999999999887663 4678999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHc-CCCCeEEEEEcccCCCCCccc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~-~~~~~~~~~~~~~~~~~g~~~ 157 (368)
+.+++|..+...+....|.++...++. ...++ |++++++.++. .++.++++++...+|++|.++
T Consensus 98 v~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~--------------d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~ 163 (388)
T PRK08637 98 LPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGF--------------DTDALKEALQAAYNKGKVIVILNFPNNPTGYTP 163 (388)
T ss_pred EcCCCCccHHHHHHHhcCCEEEEecccCCCCcC--------------CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC
Confidence 999988876543333445444332221 12222 79999988872 112334444433344456555
Q ss_pred CCHHHHHHHHHHHHH-----hCCEEEEehhhhch-hcccCc-c-ccc-cCCCcc---h--hhhhhhcc-CCccceeeeeh
Q 017633 158 PKPDFLNAIRRITKE-----NGALLIFDEVMTGF-RLAYGG-A-QEY-FGVTPD---L--TTLGKIIG-GGLPVGAYGGR 222 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~-----~~~~li~De~~~~~-~~g~~~-~-~~~-~~~~~d---i--~s~sK~~~-~G~~iG~v~~~ 222 (368)
+ .+.+++|+++|++ |++++|+||+|.++ +.+... . ... .+.... + .++||.++ +|+|+||+++.
T Consensus 164 s-~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 164 T-EKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred C-HHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 4 4559999999886 99999999999888 544321 1 111 121112 2 38999987 89999999753
Q ss_pred ------HHHHHHhcCCC-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH---HHHHHHhcC----Cc
Q 017633 223 ------RDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG---IIDAGKKAG----HA 288 (368)
Q Consensus 223 ------~~~~~~~~~~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~---l~~~~~~~~----~~ 288 (368)
+++++.+.... .......++.|.+++.++.+.++ ++.+.+++++..+.++++ +.+.+...+ ..
T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~ 319 (388)
T PRK08637 243 TKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQ 319 (388)
T ss_pred cccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Confidence 56666654210 01111234668888888777764 344544554444444433 233333331 22
Q ss_pred eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHh
Q 017633 289 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~ 366 (368)
...+..|.++|+.+. ..+..++++.|+ ++||.+.+.+...+|+++. .+++++++++++|.+++.
T Consensus 320 ~~~~~~g~~~~~~l~--------------~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 320 AYPFNSGYFMCLKLK--------------GVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred cccccceEEEEecCC--------------hHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 223344567776651 224578999986 5699887665556777664 589999999999999987
Q ss_pred hC
Q 017633 367 QI 368 (368)
Q Consensus 367 ~~ 368 (368)
++
T Consensus 386 ~~ 387 (388)
T PRK08637 386 DL 387 (388)
T ss_pred hc
Confidence 53
No 199
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=196.55 Aligned_cols=292 Identities=12% Similarity=0.086 Sum_probs=184.9
Q ss_pred CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCC-ceEEEEcCCCCCCchhhhhhcCCCccccCC-CC
Q 017633 31 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGL-PD 107 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 107 (368)
++....+|++.++++++ +.++|++++|+++++..++.++. .++ +.|++.+++|.. ........|..+...+. ..
T Consensus 57 ~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~--~~g~~~vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~ 133 (364)
T PRK04781 57 PDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC--VPGRDAVLVTPPVFGM-YAVCARLQNAPLVEVPLVDG 133 (364)
T ss_pred CCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc--CCCCCeEEEcCCChHH-HHHHHHHcCCEEEEEecCCC
Confidence 33346899999999997 78899999999999999987662 234 678877776543 23333334443332221 11
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
..++. .|++++++.+.. ++++++++...+|++|.+.+.++ +++++++|+ +++++|+||+|.+|
T Consensus 134 ~~~~~------------~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~-~~~l~~~~~-~~~~iI~Deay~~f~ 197 (364)
T PRK04781 134 ADGFH------------ADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQ-IERALQALQ-GKALVVVDEAYGEFS 197 (364)
T ss_pred ccCCC------------cCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHH-HHHHHHhCC-CCcEEEEeCcchhhc
Confidence 11211 167777655532 35666666555566777776333 777777765 47899999999988
Q ss_pred hcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC--
Q 017633 187 RLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-- 262 (368)
Q Consensus 187 ~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~-- 262 (368)
..... ...+..+....+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++.++++ +..
T Consensus 198 ~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~-----~~~~~~~~~~~~a~~~l~---~~~~~ 269 (364)
T PRK04781 198 DVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ-----APYPVPTPCAALAEQALS---APALA 269 (364)
T ss_pred CCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHh---cccHH
Confidence 32211 11122223344679999999 9999999999999999887432 345677888877776664 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-
Q 017633 263 TYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF- 340 (368)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~- 340 (368)
+..+..+..+..++.+.+.+.+. +.....+..+.++|+.+. +..++.+.|.++||.++++..
T Consensus 270 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----------------~~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 270 VTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----------------DAEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----------------CHHHHHHHHHHCCeEEeeCCCC
Confidence 22222222233334444444444 222244566788887652 136788999999999998742
Q ss_pred ----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 341 ----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 341 ----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.++|+++. +.+++++++++|+++..
T Consensus 334 ~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 334 PRLSDALRITLG-TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCCeEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 23455543 67889999999988654
No 200
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.2e-24 Score=201.41 Aligned_cols=334 Identities=14% Similarity=0.070 Sum_probs=189.3
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC------C---C--CCeEEEeCChHHHHHHHHHHHH---HhcCCc
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV------P---S--IEMVRFVNSGTEACMGVLRLAR---AFTGRE 76 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~---~--~~~v~~~~~gt~a~~~al~~~~---~~~~~~ 76 (368)
+|+.+.++.+.+.. .. |.++....++++++++.+ . . .++|++|+|+++|+..++.++. ...++|
T Consensus 114 ~~~~v~e~~~~~~~-~~-Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD 191 (527)
T PRK09275 114 ADEFVYELVDGIIG-DN-YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGD 191 (527)
T ss_pred CCHHHHHHHHHHhc-CC-CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCC
Confidence 34433335565543 33 344555667777766622 1 1 2489999999999999886421 235789
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCC--CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLP--DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
.|++..+.|..+... ..+.+.+.....++ ...++. .|.++++++++ +++++++++..+|++|
T Consensus 192 ~Vlv~~P~y~~Y~~~-~~l~g~~~~~v~v~~~~~~~f~------------~d~~~l~~~~~---~~tkai~l~nP~NPTG 255 (527)
T PRK09275 192 KIALMTPIFTPYLEI-PELPRYDLEVVHINADEENEWQ------------YPDSELEKLRD---PSIKALFLVNPSNPPS 255 (527)
T ss_pred EEEEeCCChHHHHHH-HHHcCCCeEEEEeecCcccCCC------------CCHHHHHhhcC---CCCCEEEEeCCcCCcC
Confidence 999999999876433 23333222211121 111111 17889988776 4666666554455566
Q ss_pred cccCCHHHHHHHHHHHHH--hCCEEEEehhhhchhcccCcccccc-CCCcchhhhhhhcc-CCccceeeeehHH-----H
Q 017633 155 FIAPKPDFLNAIRRITKE--NGALLIFDEVMTGFRLAYGGAQEYF-GVTPDLTTLGKIIG-GGLPVGAYGGRRD-----I 225 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~~~g~~~~~~~~-~~~~di~s~sK~~~-~G~~iG~v~~~~~-----~ 225 (368)
.+.+ ++.+++|+++|++ +|+++|+||+|..|..........+ .....+.||||.++ +|||+||++++++ +
T Consensus 256 ~v~s-~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~ 334 (527)
T PRK09275 256 VAMS-DESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKL 334 (527)
T ss_pred CCCC-HHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHH
Confidence 6555 5559999999965 4999999999987721111111111 22334569999998 8999999998765 3
Q ss_pred HHHhc-----------------------------CCCCccccccCCCCHHHHHH-HHH-HHHHHcc-CCHHHHHHHHHHH
Q 017633 226 MEMVA-----------------------------PAGPMYQAGTLSGNPLAMTA-GIH-TLKRLKE-PGTYEYLNKITGE 273 (368)
Q Consensus 226 ~~~~~-----------------------------~~~~~~~~~t~~~~~~~~~a-~~~-~l~~~~~-~~~~~~~~~~~~~ 273 (368)
++.+. ..+......+.+.+.+.|.+ ++. ....+.. +.+.+..++..+.
T Consensus 335 i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~ 414 (527)
T PRK09275 335 IAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRR 414 (527)
T ss_pred HHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 33220 00122234556677666665 221 1122222 2233333322222
Q ss_pred HHHHHHHHHHhcCCce--EEeeccceEEEEeecCCC----cccchhcccccHHHHHHHHHHHHc-CeeecCCCC-----C
Q 017633 274 LTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPV----YNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF-----E 341 (368)
Q Consensus 274 l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~-----~ 341 (368)
.++.+.+ .++... ..+..+.++++++..... ..+..- .....+..+++.+|+++ ||.+.||.. .
T Consensus 415 Rr~~l~~---~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~-l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~ 490 (527)
T PRK09275 415 RYKALYE---GLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADY-LKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEW 490 (527)
T ss_pred HHHHHHH---HcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhh-hhccCCHHHHHHHHHhcCCEEEeCchhhCCCCC
Confidence 2222322 223222 224455666776643110 000000 00112357788888755 999999742 3
Q ss_pred ccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 342 AGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 342 ~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
++|++++ .+++++.++.++|++++++
T Consensus 491 ~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 491 SVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4678877 5889999999999999865
No 201
>PLN02397 aspartate transaminase
Probab=99.93 E-value=1.4e-24 Score=200.04 Aligned_cols=300 Identities=16% Similarity=0.092 Sum_probs=175.1
Q ss_pred CCCChhHHHHHHHHHhhCC--C-----CCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCC
Q 017633 29 GAPCLLENVLAEMVISAVP--S-----IEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG 99 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~--~-----~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 99 (368)
|.+.....+|++++++++. + .+.+.. +.+|+.+..+.+.+.....++|.|++.+++|..+...+.. .|..
T Consensus 87 Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~-~g~~ 165 (423)
T PLN02397 87 YLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRD-AGVP 165 (423)
T ss_pred CCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH-cCCe
Confidence 4566778889999988763 1 123311 3344444333332222234778999999999877544443 3333
Q ss_pred ccccCC-CCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE
Q 017633 100 VATLGL-PDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 177 (368)
Q Consensus 100 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~l 177 (368)
....++ +.. .+. |++.+++.+....++++++++...+|++|.+++ .+++++|+++|++||+++
T Consensus 166 ~~~v~l~~~~~~~~--------------d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s-~e~l~~i~~~a~~~~~~v 230 (423)
T PLN02397 166 VRTYRYYDPKTRGL--------------DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPT-PEQWEQISDLIKSKNHLP 230 (423)
T ss_pred EEEeecccCcCCcc--------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhCCcEE
Confidence 322211 111 111 788888888654345556655555555666555 555999999999999999
Q ss_pred EEehhhhch-hccc---Ccccccc---C-CCcchhhhhhhcc-CCccceeee--e-hHHHHHHhcC-CCCccccccCCCC
Q 017633 178 IFDEVMTGF-RLAY---GGAQEYF---G-VTPDLTTLGKIIG-GGLPVGAYG--G-RRDIMEMVAP-AGPMYQAGTLSGN 244 (368)
Q Consensus 178 i~De~~~~~-~~g~---~~~~~~~---~-~~~di~s~sK~~~-~G~~iG~v~--~-~~~~~~~~~~-~~~~~~~~t~~~~ 244 (368)
|+||+|.+| ..+. ......+ + ....+.||||.++ +|||+||++ + ++++++.+.. ..........+.+
T Consensus 231 I~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (423)
T PLN02397 231 FFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPP 310 (423)
T ss_pred EEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCc
Confidence 999999988 4321 1111111 1 1233568999999 899999984 3 4554432221 0011112233456
Q ss_pred HHHHHHHHHHHHHHc-c-------CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 245 PLAMTAGIHTLKRLK-E-------PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~-~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.+++.++..+++.-. . +++.+.++++++.+.+.|++.....++....+..+.++|+.+.
T Consensus 311 ~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------------- 377 (423)
T PLN02397 311 IHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------------- 377 (423)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC-------------
Confidence 677777665554210 0 1233455555555555555531111122223445556666541
Q ss_pred ccHHHHHHHHHHHH-cCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHh
Q 017633 317 ETTKFARFYRGMLE-EGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 317 ~~~~~~~~~~~l~~-~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~ 366 (368)
.++++.|++ +||.+.+++ |++++ .+++.+++++++|+++++
T Consensus 378 -----~~~~~~Ll~~~~V~v~~~~----Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 378 -----KEQVDRMTKEYHIYMTRDG----RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -----HHHHHHHHHhCCEEECCCC----eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 458888865 599998654 66665 899999999999999874
No 202
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=2.2e-23 Score=189.21 Aligned_cols=295 Identities=18% Similarity=0.223 Sum_probs=189.3
Q ss_pred hhHHHHHHHHHhhCC-CC--CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCch-hhhhhcCCCccccCCCCC
Q 017633 33 LLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD-PFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 108 (368)
+...++++.+++.++ +. ..+++++||+++++.++.... .+++++++..+++++... ......|.++.....+..
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--PRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--CCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC
Confidence 678899999999987 33 368889999999999997663 356677777777666532 222333443332222111
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
..+ |++++++.++++ ++++.++...+++.+|...+ +++|.++|++||+++|+|++|+ + .
T Consensus 109 ~~~--------------d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~-g 167 (355)
T TIGR03301 109 EPP--------------DLNRIEEALAAD-PDITHVATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-F-G 167 (355)
T ss_pred CCC--------------CHHHHHHHHHhC-CCceEEEEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-c-C
Confidence 111 799999999864 24445554445555787777 9999999999999999998875 2 1
Q ss_pred ccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC-cc-------------ccccCCCCHHHHHHHHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-MY-------------QAGTLSGNPLAMTAGIHT 254 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~-~~-------------~~~t~~~~~~~~~a~~~~ 254 (368)
+..+.+..++.+..+.+++|+++|+.++|++++++++++.+..... .. ....++.+...+.++.++
T Consensus 168 ~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~a 247 (355)
T TIGR03301 168 AIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQA 247 (355)
T ss_pred CcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHH
Confidence 1223344445544457899999766678999999988877652111 00 012345677788888888
Q ss_pred HHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 255 LKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 255 l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
++.+.+++ ..++++++++++++.|++ .+...... ..+.++++.+... ...+..++.+.
T Consensus 248 l~~~~~~g~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 312 (355)
T TIGR03301 248 LEELEAEGGVPARIARYRRNRELLVDGLRA----LGFQPLLPERWQSPIIVSFLYPDD-----------PDFDFDDFYQE 312 (355)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHH----cCCeeecCCCCCCCcEEEEECCCC-----------CcchHHHHHHH
Confidence 88775443 234455555555555544 33321111 1223445544210 01234689999
Q ss_pred HHHcCeeecCCCC---Cccccc--cCCCHHHHHHHHHHHHHHH
Q 017633 328 MLEEGVYFAPSQF---EAGFTS--LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 328 l~~~Gi~~~~~~~---~~~~~~--~~~~~~~i~~~~~~l~~~l 365 (368)
|.++||.+.+++. ..+|++ ..++++|++++++.|++++
T Consensus 313 l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 313 LKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 9999999998753 345553 4569999999999998764
No 203
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.93 E-value=6.9e-24 Score=196.14 Aligned_cols=343 Identities=13% Similarity=0.053 Sum_probs=185.8
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHH-----hhCC----CCC--eEEEeCChHHHHHHHHHHHH---Hhc
Q 017633 8 FPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVI-----SAVP----SIE--MVRFVNSGTEACMGVLRLAR---AFT 73 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~-----~~~~----~~~--~v~~~~~gt~a~~~al~~~~---~~~ 73 (368)
+..+++++.++.+.+.. .+|..+ .....++++++ +.+. ..+ +|++|+|+++|+..++..+. ...
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~Y~~p-~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~ 182 (521)
T TIGR03801 105 GFDPDAFLYEMCDGIIG-DNYPVP-DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLK 182 (521)
T ss_pred CCCCCHHHHHHHHHhhc-CCCCCC-CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence 33456777777776533 234323 22233333333 2221 223 89999999999999886421 135
Q ss_pred CCceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
++|.|++..++|..+........ +..++......... .+ ...+. .|.++++++++ +++++++++..+|+
T Consensus 183 pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~----~g--~~~~~-~d~~~l~~~~~---~~~kai~l~nP~NP 252 (521)
T TIGR03801 183 KGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTE----DG--THTWQ-YPDKELEKLRD---PSIKALFVVNPSNP 252 (521)
T ss_pred CCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccc----cc--cccCC-CCHHHHHHhcC---CCCcEEEEeCCCCC
Confidence 78999999999987543322221 22222111111000 00 00000 17888888765 35666665444455
Q ss_pred CCcccCCHHHHHHHHHHHHHh--CCEEEEehhhhchhcccCcccccc-CCCcchhhhhhhcc-CCccceeeeehHH----
Q 017633 153 SGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRLAYGGAQEYF-GVTPDLTTLGKIIG-GGLPVGAYGGRRD---- 224 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~--~~~li~De~~~~~~~g~~~~~~~~-~~~~di~s~sK~~~-~G~~iG~v~~~~~---- 224 (368)
+|.+.+.++ +++|+++|++| ++++|+||+|..|........... ....-+.||||.++ +|||+||++++++
T Consensus 253 TG~vls~e~-l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d 331 (521)
T TIGR03801 253 PSVAMSDES-IEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFD 331 (521)
T ss_pred CCCCCCHHH-HHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCchHHHH
Confidence 666555444 99999999987 999999999987721111111111 12233569999998 8999999988754
Q ss_pred -HHH--------HhcCC---------------------CCccccccCCCCHHHHH--HHHHHHHHHcc-CCHHHHHHHHH
Q 017633 225 -IME--------MVAPA---------------------GPMYQAGTLSGNPLAMT--AGIHTLKRLKE-PGTYEYLNKIT 271 (368)
Q Consensus 225 -~~~--------~~~~~---------------------~~~~~~~t~~~~~~~~~--a~~~~l~~~~~-~~~~~~~~~~~ 271 (368)
+++ .+..+ +......+.+.+.+.|. ++.++...+.. +.+.+..+++.
T Consensus 332 ~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~ 411 (521)
T TIGR03801 332 KLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDIC 411 (521)
T ss_pred HHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 221 11100 01122344455555554 32223333322 23333333333
Q ss_pred HHHHHHHHHHHHhcCCce--EEeeccceEEEEeecCCC----cccchhcccccHHHHHHHHHHHH-cCeeecCCCC----
Q 017633 272 GELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPV----YNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF---- 340 (368)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~---- 340 (368)
+..++.+.+. ++... ..+..+.++++++..... ..|..- .....+..+++.+|++ .||.+.||..
T Consensus 412 ~~R~~~l~~~---Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~-l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~ 487 (521)
T TIGR03801 412 RRREKLLFRG---LGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSY-LKKNYSPVDVLFRLAEETGIVLLPGGGFGGP 487 (521)
T ss_pred HHHHHHHHHh---cCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHH-HhccCCHHHHHHHHHHhCCEEEeCchhcCCC
Confidence 3333333332 23321 223445677777642110 000000 0001124678877875 4999999842
Q ss_pred -CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 341 -EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 341 -~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
..+|++++ .+++++.++.++|++++++
T Consensus 488 ~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 488 EWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 24677777 5899999999999998865
No 204
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=3.6e-23 Score=187.31 Aligned_cols=315 Identities=23% Similarity=0.218 Sum_probs=203.6
Q ss_pred ceeccCCC-cHHHHHHHHHHHHcCCC-------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFPS-YLQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~~-~~~v~~a~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.-+||+. ||+|++++.+++++... .....+...++++.++++++.. ..+++++|++++..++..+. .+
T Consensus 8 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~iv~~sg~~a~~~~~~~~~--~~ 84 (349)
T cd06454 8 SNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-AALVFSSGYAANDGVLSTLA--GK 84 (349)
T ss_pred cCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-CEEEeccHHHHHHHHHHHhc--CC
Confidence 45678995 99999999999986321 1134677899999999999743 45666789999998876553 45
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC--CCCeEEEEEcccCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIAAIILEPVVGN 152 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~--~~~~~~~~~~~~~~~ 152 (368)
++.|++..+.| ..........|..+ ..++..|.+++++.+++. +++++++++++.+++
T Consensus 85 gd~Vl~~~~~~-~~~~~~~~~~g~~~-------------------~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~ 144 (349)
T cd06454 85 GDLIISDSLNH-ASIIDGIRLSGAKK-------------------RIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSM 144 (349)
T ss_pred CCEEEEehhhh-HHHHHHHHHcCCce-------------------EEecCCCHHHHHHHHHHhhccCCCeEEEEeccccC
Confidence 67787766544 33333333222221 222223788899998853 246788888888888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-chh--cccCc---cccccCCCcchhhhhhhccCCccceeeeehHHHH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR--LAYGG---AQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~--~g~~~---~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
+|...+ +++|+++|++||+++|+||+|. +.. .+... .....+.+..+.|+||.+++ +.|+++.+++++
T Consensus 145 tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~gG~i~~~~~~~ 218 (349)
T cd06454 145 DGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA--VGGYIAGSKELI 218 (349)
T ss_pred CCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc--cCCEEECCHHHH
Confidence 888777 9999999999999999999995 321 11110 11112222224589999984 458888888887
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
+.+....... ..+.+.++..++++.++++.+.+ +...+++.++.+.+++.|.+. +........+.+.++..
T Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~~~~~~--- 290 (349)
T cd06454 219 DYLRSYARGF-IFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL----GFPVGGSPSHIIPPLIG--- 290 (349)
T ss_pred HHHHHhchhh-hccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcEEEEeC---
Confidence 7765322111 12235677888888888887654 334556666666666666553 33222121222223221
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Ccccc--ccCCCHHHHHHHHHHHHHH
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~~--~~~~~~~~i~~~~~~l~~~ 364 (368)
++..+..++++.|.++||.+.+++. ..+|+ +...+++++++++++|+++
T Consensus 291 ----------~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 291 ----------DDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ----------CChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1223457899999999999986421 23454 4557999999999999864
No 205
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=185.96 Aligned_cols=283 Identities=17% Similarity=0.066 Sum_probs=180.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 89 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 89 (368)
++|.+.+++.+++..... +|. ...++++++++++ +++++|+|+++++..++.++ .+++.|++..++|....
T Consensus 21 ~p~~~~~a~~~~~~~~~~--yp~--~~~l~~~ia~~~~--~~I~vt~G~~~al~~~~~~~---~~gd~vlv~~P~y~~~~ 91 (311)
T PRK08354 21 PPEWLDEMFERAKEISGR--YTY--YEWLEEEFSKLFG--EPIVITAGITEALYLIGILA---LRDRKVIIPRHTYGEYE 91 (311)
T ss_pred CCHHHHHHHHHHHHHhhc--CCC--hHHHHHHHHHHHC--CCEEECCCHHHHHHHHHHhh---CCCCeEEEeCCCcHHHH
Confidence 468899999887655332 332 4678999999886 47999999999998877543 35789999999988765
Q ss_pred hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 90 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
..+.. .|..+ ..++. |++.+++.++ +...+++++|+ |++|.+.+ .+.+++|+++
T Consensus 92 ~~~~~-~g~~~-------------------~~~~~-d~~~l~~~~~---~~~~vi~~~P~-NPTG~~~~-~~~l~~l~~~ 145 (311)
T PRK08354 92 RVARF-FAARI-------------------IKGPN-DPEKLEELVE---RNSVVFFCNPN-NPDGKFYN-FKELKPLLDA 145 (311)
T ss_pred HHHHH-cCCEE-------------------eecCC-CHHHHHHhhc---CCCEEEEecCC-CCCCCccC-HHHHHHHHHH
Confidence 44333 23222 11111 7888888876 23456666774 45565555 4559999999
Q ss_pred HHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHH
Q 017633 170 TKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 247 (368)
Q Consensus 170 ~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 247 (368)
|++||+++|+||+|.+| ..+.. .. ......+.||||.++ +|+|+||+++ +.+.+.... ..+..+..+
T Consensus 146 a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~-----~~~~~~~~~ 214 (311)
T PRK08354 146 VEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVR-----MPWSIGSTG 214 (311)
T ss_pred hhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcC-----CCccCCHHH
Confidence 99999999999999988 43321 11 222334569999999 9999999988 334443211 233445555
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 248 MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 248 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
++++.+.++ +. .+++.++.+.+++..+.+..... ..+.++++++.+. +..++++.
T Consensus 215 ~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~----------------~~~~~~~~ 269 (311)
T PRK08354 215 YAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKALY----VKSDANFFIKDVG----------------DAEKFVEF 269 (311)
T ss_pred HHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhcC----CCCCCcEEEEECC----------------CHHHHHHH
Confidence 555444433 22 23444555555554444322221 2344555555431 13678899
Q ss_pred HHHcCeeecCCCCC----ccccccCCCHHHHHHHHHHHHHH
Q 017633 328 MLEEGVYFAPSQFE----AGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 328 l~~~Gi~~~~~~~~----~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
|.++||.+.++..+ ++|+++. +.++.+++++.|+++
T Consensus 270 l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 309 (311)
T PRK08354 270 LKRNGILVRDCTSFGLPGYIRFSVR-DREENEKLIRALREW 309 (311)
T ss_pred HHHCCeEEEecccCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 99999999998543 2344433 456778888888765
No 206
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.93 E-value=1e-22 Score=173.50 Aligned_cols=319 Identities=17% Similarity=0.157 Sum_probs=226.4
Q ss_pred eeccCC-CcHHHHHHHHHHHHcC-C------CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILFP-SYLQVLAALGETMKKG-T------SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g~-~~~~v~~a~~~~~~~~-~------~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
+-++|- .+|+|++|+.+.+++. . +-...+....+|.+.|+++++.....+|+ |..-|++..+.++.+.-++
T Consensus 179 NDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFs-SCfVANDstLftLak~lpg 257 (570)
T KOG1360|consen 179 NDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFS-SCFVANDSTLFTLAKKLPG 257 (570)
T ss_pred CccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeee-eeeeccchHHHHHHHHCCC
Confidence 345565 8999999999999882 1 12335678899999999999865566665 5777777777444333344
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~~g 154 (368)
-+|..+...|++....+..++. +-..+.+||++.|++++.+. ++.++.+-+|++++|.|
T Consensus 258 -cei~SD~gNHASMI~GIrns~v-------------------~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~G 317 (570)
T KOG1360|consen 258 -CEIFSDEGNHASMIQGIRNSRV-------------------PKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDG 317 (570)
T ss_pred -cEEeccccchHHHHHHhhhcCC-------------------cceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCC
Confidence 3455566777765544444333 23445677999999999974 45688999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCC--cchh--hhhhhccCCccceeeeehHHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVT--PDLT--TLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~--~di~--s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
.+.| ++||++++++||.+.++||+| .|+ .....+.-+.-|+. .||+ |++|+||. -.||+..+.++++.
T Consensus 318 avcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc--VGGYIAat~~LvDm 391 (570)
T KOG1360|consen 318 AVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC--VGGYIAATRKLVDM 391 (570)
T ss_pred CcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc--ccceehhhhhHHHH
Confidence 9999 999999999999999999999 555 22222344555653 4664 79999983 23578889999999
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccC-C--HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-G--TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~-~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
++.....+. .|.+.+|..++.++++.+.+..+ + +++..+++.+++++.|.+ .|.| .++....++.+.+.
T Consensus 392 iRSyAaGFI-FTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~----~GiP-Vi~~pSHIiPv~vg-- 463 (570)
T KOG1360|consen 392 IRSYAAGFI-FTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME----LGIP-VIPNPSHIIPVRVG-- 463 (570)
T ss_pred HHHhcCceE-EecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH----cCCc-ccCCCcceeeeecc--
Confidence 887665555 44478889999999999988643 2 444455555555555555 4554 34445666666663
Q ss_pred CCcccchhcccccHHHHHHHHHHHH-cCeeecCCCCCcc-------c--cccCCCHHHHHHHHHHHHHHHhhC
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQFEAG-------F--TSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~~-------~--~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.....+.++.|+. +||++..-.+|.+ + +...+|.+.++.+++.+..++.++
T Consensus 464 -----------da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 464 -----------DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred -----------CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 44556788888875 5999977654432 3 456679999999999999988764
No 207
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.93 E-value=9.7e-23 Score=185.22 Aligned_cols=308 Identities=17% Similarity=0.139 Sum_probs=199.1
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcC--------CCC-C-----CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHH
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKG--------TSF-G-----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVL 66 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~--------~~~-~-----~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al 66 (368)
.++++||+ .+|++.+++.+++.+. .+. + ...+...++++.++++++.. ..++.++|+.++...+
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~~a~~~~~ 88 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGYMANLGLC 88 (370)
T ss_pred ECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChHHHHHHHH
Confidence 46789998 8889999998887663 111 1 13568999999999999753 4466667888886544
Q ss_pred HHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEE
Q 017633 67 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAA 143 (368)
Q Consensus 67 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~ 143 (368)
... .+++.+|+.+..+|++....+..... . .+.++++|+++++++++.. ++++.+
T Consensus 89 ~~~---~~~~d~ii~d~~~H~sv~~~~~~~~~-~------------------~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 146 (370)
T PRK05937 89 AHL---SSVTDYVLWDEQVHISVVYSLSVISG-W------------------HQSFRHNDLDHLESLLESCRQRSFGRIF 146 (370)
T ss_pred HHh---CCCCCEEEEEhhhhHHHHHHHHHcCC-c------------------eEEecCCCHHHHHHHHHhhhccCCCcEE
Confidence 332 34557888889999887665554211 0 1223455899999999742 134667
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccC---CCcchhhhhhhccC-Cccc
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG---VTPDLTTLGKIIGG-GLPV 216 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~---~~~di~s~sK~~~~-G~~i 216 (368)
++++++++++|.+.| +++|.++|+++|+++++||+|+ |. ..+.. ....++ ..+++.||||++++ |
T Consensus 147 v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~~~~~~~~~tlsK~~g~~G--- 218 (370)
T PRK05937 147 IFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG-FCHSLGYENFYAVLVTYSKALGSMG--- 218 (370)
T ss_pred EEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCc-hHHhhCCCCCcEEEEechhhhhcCc---
Confidence 788999999999999 9999999999999999999995 42 23322 112233 23567899999984 3
Q ss_pred eeeeehHHHHHHhcC-CCCccccccCCCCHHHHHHHHHHHHHHccCC--HHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 017633 217 GAYGGRRDIMEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG--TYEYLNKITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 217 G~v~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
+.++..++..+.+.. ..+.. .+.+.++.+++++.++++.+.+.. ..+++.++.+++++.+.. ..
T Consensus 219 ~~vl~~~~~~~~~~~~~~~~~--~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~----~~------- 285 (370)
T PRK05937 219 AALLSSSEVKQDLMLNSPPLR--YSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS----AA------- 285 (370)
T ss_pred eEEEcCHHHHHHHHHhCCCCe--ecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC----CC-------
Confidence 234444554444331 11222 233567788888888888886533 233344444444333321 11
Q ss_pred ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC---CCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+....+.+ ......++.+.|.++||.++... .+.+| ++..++++|++++++.|++++++
T Consensus 286 ~~~~~~i~~--------------~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 286 PGCVQPIFL--------------PGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred CCCEEEEEe--------------CChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 111112222 11234678889999999887432 22344 45678999999999999998865
No 208
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=2.2e-23 Score=188.83 Aligned_cols=314 Identities=18% Similarity=0.150 Sum_probs=192.2
Q ss_pred CcHHHHHHHHHHHHc-CCCCCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKK-GTSFGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|.+++++.+.-.. ....+.+.....++++.++++++ +.+++++++|+++++..++..+. ..+++|++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--~~g~~vl~~ 89 (350)
T cd00609 12 PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--NPGDEVLVP 89 (350)
T ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--CCCCEEEEc
Confidence 444555555441111 12223344455566666666553 26789999999999999987662 356788888
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.+.|+.... .....+..+...+........ .+.+.++.... ++++++++++.++++|.+.+ .+
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~-~~ 152 (350)
T cd00609 90 DPTYPGYEA-AARLAGAEVVPVPLDEEGGFL------------LDLELLEAAKT---PKTKLLYLNNPNNPTGAVLS-EE 152 (350)
T ss_pred CCCchhHHH-HHHHCCCEEEEEecccccCCc------------cCHHHHHhhcC---ccceEEEEECCCCCCCcccC-HH
Confidence 877766533 333333222211111111100 01144444433 57888888887777777655 55
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCc----cccccCCCcchhhhhhhcc-CCccceeeeehH-HHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGG----AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~----~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~-~~~~~~~~~~~ 234 (368)
.+++|+++|+++|+++|+|++|+++ ..+... ..+..+....+.|++|.++ +|.++|++++++ ++.+.+..
T Consensus 153 ~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~--- 229 (350)
T cd00609 153 ELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK--- 229 (350)
T ss_pred HHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH---
Confidence 5999999999999999999999876 333321 1222333344568999999 889999999988 78887763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLK--EPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
.....+++.+..++.++..+++... -+...+++.++++++++.|++ .+... .....+.++++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~g~~~~~~~~-------- 297 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKE----LGPLVVVKPSGGFFLWLDLP-------- 297 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCccEEEEEecC--------
Confidence 2233456778888888877777542 122344455555555555544 33222 23445566666653
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCC------CCccccccCCCHHHHHHHHHHHH
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~ 362 (368)
.......+.+.|.++||.+.++. ...+|+.....++|+++++++|+
T Consensus 298 -----~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 298 -----EGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred -----CCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 11234556677777799999873 33456654445999999999886
No 209
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=3.6e-23 Score=186.91 Aligned_cols=301 Identities=12% Similarity=0.079 Sum_probs=186.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.++.+++++.+.+.....| .+.....++++.++++++ +++++++|+|+++++..+++ + .+ +++++..++|...
T Consensus 36 ~~~~~~~~~~~~~~~~~~Y-~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l---~~-~~viv~~P~y~~~ 109 (349)
T PRK07908 36 PPEWLRERLAARLGDLAAY-PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-L---RP-RRAAVVHPSFTEP 109 (349)
T ss_pred CCHHHHHHHHHHhhHhhcC-CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-c---CC-CeEEEeCCCChHH
Confidence 5778999998887653333 233567899999999998 78999999999999998887 3 23 5677778888765
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
.. .+...|.++........... |++++ . ++++++++...+|++|.+++ .++|.+
T Consensus 110 ~~-~~~~~G~~i~~v~~~~~~~~--------------d~~~l----~---~~~~~i~l~np~NPTG~~~~----~~~l~~ 163 (349)
T PRK07908 110 EA-ALRAAGIPVHRVVLDPPFRL--------------DPAAV----P---DDADLVVIGNPTNPTSVLHP----AEQLLA 163 (349)
T ss_pred HH-HHHHcCCEEEeeccCcccCc--------------ChhHh----c---cCCCEEEEcCCCCCCCCCcC----HHHHHH
Confidence 43 33334443322211110011 45533 2 24556666444566777777 667888
Q ss_pred HHHHhCCEEEEehhhhchhcccCccccccC--CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 169 ITKENGALLIFDEVMTGFRLAYGGAQEYFG--VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~~~g~~~~~~~~~--~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|+ ++.++|+||+|.++..+......... ....+.||||.++ +|+|+||+++++++++.+.... ..+..++
T Consensus 164 l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~-----~~~~~~~ 237 (349)
T PRK07908 164 LRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGR-----AHWPVGT 237 (349)
T ss_pred HHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcC-----CCCCccH
Confidence 886 47889999999877222222211111 1223458999999 9999999999999988876422 1234556
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 246 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 246 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
+.+.++.+.++.. ...+.++.++..+..++.+.+.+.+.+.....+..++++|+.+. + ..++.
T Consensus 238 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~-------------~---~~~~~ 300 (349)
T PRK07908 238 LQLEAIAACCAPR-AVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVP-------------D---AELLR 300 (349)
T ss_pred HHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECC-------------c---HHHHH
Confidence 6655544443300 11222333333333344444444333433233355777787652 1 36788
Q ss_pred HHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 326 RGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 326 ~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+.|.++||.+.++.. .++|+++ .+++++++++++|++++.
T Consensus 301 ~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 301 KRLRERGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHhCCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHHHHh
Confidence 889999999998632 2345555 477899999999998874
No 210
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.92 E-value=1.6e-22 Score=186.01 Aligned_cols=320 Identities=15% Similarity=0.129 Sum_probs=205.0
Q ss_pred cCCCcHHHHHHHHHHHHcCCC--CCCC-------ChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHH--hc
Q 017633 7 LFPSYLQVLAALGETMKKGTS--FGAP-------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARA--FT 73 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~--~~~~-------~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~--~~ 73 (368)
.|..++.+++++.+.+..... .... .+..+++++.++++++ . .+++++++|+|+++..++..... ..
T Consensus 25 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~ 104 (398)
T TIGR03392 25 TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQ 104 (398)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCC
Confidence 455678899999888754211 1111 1345678899999987 3 68999999999999999865521 34
Q ss_pred CCceEEEEcCCCCCCchhhh---hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 74 GRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
++++|++.++.|++...... ...|..+...+... .+.. |+++++++++ ++++++++...+
T Consensus 105 ~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~-------------~~~~l~~~i~---~~t~lv~i~~~~ 167 (398)
T TIGR03392 105 PGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA-DLLP-------------DIRQLPELLT---PRTRILALGQMS 167 (398)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC-CCCc-------------CHHHHHHHhc---cCceEEEEECcc
Confidence 67889998888876433222 22333332221111 1111 7899999987 467888887777
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHH
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~ 228 (368)
+++|.+.+ +++|.++|++||+++++|++|+... ....... ..+|+.++| |.+++ .++|++++++++++.
T Consensus 168 n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~--~~~d~~~~s~~K~~gp-~G~G~l~~~~~~~~~ 238 (398)
T TIGR03392 168 NVTGGCPD----LARAITLAHQYGAVVVVDGAQGVVH--GPPDVQA--LDIDFYAFSGHKLYGP-TGIGVLYGKTELLEA 238 (398)
T ss_pred ccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCC--CCCChhh--cCCCEEEEecccccCC-CceEEEEEcHHHHhh
Confidence 78898888 9999999999999999999995221 1112222 345777666 97763 358999999888777
Q ss_pred hcCCC---Cc---------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-Cce
Q 017633 229 VAPAG---PM---------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAI 289 (368)
Q Consensus 229 ~~~~~---~~---------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~ 289 (368)
+.... .. ...-.-+.+..+..++.++++.+.+.++ +.+.++...+++.+.+.+...+ ...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~-~~i~~~~~~l~~~l~~~l~~l~g~~~ 317 (398)
T TIGR03392 239 MPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDI-AAAEAWSVSLADLAEERLAQLPGFRS 317 (398)
T ss_pred CCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 64211 00 0001114566677788888887755443 2444445555555555444332 211
Q ss_pred EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------------Ccccc--ccCCCHHHHH
Q 017633 290 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFT--SLAHSSDDIQ 355 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------------~~~~~--~~~~~~~~i~ 355 (368)
......+++++.+. .....++.+.|.++||.++.+.. ..+|+ ...++++|++
T Consensus 318 ~~~~~~~i~~~~~~--------------~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~ 383 (398)
T TIGR03392 318 FRCPGSSLLAFDFA--------------GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD 383 (398)
T ss_pred eCCCCCcEEEEEeC--------------CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHH
Confidence 11122345555431 12246788899999999987642 23444 5678999999
Q ss_pred HHHHHHHHHHhh
Q 017633 356 HTITAAEKVLRQ 367 (368)
Q Consensus 356 ~~~~~l~~~l~~ 367 (368)
++++.|++++++
T Consensus 384 ~l~~~l~~~~~~ 395 (398)
T TIGR03392 384 ALVDAVGAALEL 395 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 211
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-23 Score=189.29 Aligned_cols=286 Identities=14% Similarity=0.085 Sum_probs=177.3
Q ss_pred CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 30 APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
|+.....+|++.++++++ ++++|++|+|+++++..++..... ++++.|++..++|..+... ....|.++...+...
T Consensus 57 Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~-~g~d~vlv~~P~y~~y~~~-~~~~g~~v~~v~~~~- 133 (354)
T PRK04635 57 YPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE-PGQDSIACFGPTYGMYAIS-AETFNVGVKALPLTA- 133 (354)
T ss_pred CCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHH-HHHcCCEEEEEecCC-
Confidence 344457899999999998 889999999999999999976632 2337899999888764332 233344332222111
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 187 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~ 187 (368)
.+.. |++.++. + ++++++++...+|++|.+.+.++ +++|++.|+ +++||+||+|.+| .
T Consensus 134 ~~~~-------------~~~~l~~-~----~~~~li~i~nP~NPTG~~~~~~~-l~~l~~~~~--~~~vivDeay~~~~~ 192 (354)
T PRK04635 134 DYQL-------------PLDYIEQ-L----DGAKLVFICNPNNPTGTVIDRAD-IEQLIEMTP--DAIVVVDEAYIEFCP 192 (354)
T ss_pred CCCC-------------CHHHHHh-c----cCCCEEEEeCCCCCCCccCCHHH-HHHHHHhCC--CcEEEEeCchHhhcc
Confidence 1111 6777762 2 25666666666666777777333 555555554 5999999999887 2
Q ss_pred cccCccc-cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC--H
Q 017633 188 LAYGGAQ-EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG--T 263 (368)
Q Consensus 188 ~g~~~~~-~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~--~ 263 (368)
....... .......-+.||||.++ +|+|+||+++++++++.+.... ..++.+.+.+.++.++++ +.+ .
T Consensus 193 ~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~-----~~~~~~~~~~~~a~~~l~---~~~~~~ 264 (354)
T PRK04635 193 EYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVI-----APYPVPLPVSEIATQALS---EAGLAR 264 (354)
T ss_pred CcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhc-----CCCCCCHHHHHHHHHHHh---cccHHH
Confidence 2111111 11111223569999999 8999999999999988876321 234567777777666664 221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC---
Q 017633 264 YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--- 340 (368)
Q Consensus 264 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--- 340 (368)
.++..+..+..++.+.+.+.+.+.....++.+.++|+.+. +..++.+.|.++||.++.++.
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~----------------~~~~~~~~l~~~gv~v~~~~~~~~ 328 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD----------------DVDAVFKALWDAGIVARAYKDPRL 328 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC----------------CHHHHHHHHHHCCEEEEECCCCCC
Confidence 2222222222234444444444422233445667776541 136788889999999986532
Q ss_pred -CccccccCCCHHHHHHHHHHHHHH
Q 017633 341 -EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 341 -~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
..+|+++ .+.+|+++++++|++-
T Consensus 329 ~~~lRis~-~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 329 ANCIRFSF-SNRAETDKLIGLIRNQ 352 (354)
T ss_pred CCeEEEEe-CCHHHHHHHHHHHHHh
Confidence 3456664 4789999999999764
No 212
>PLN02721 threonine aldolase
Probab=99.92 E-value=2.2e-22 Score=182.53 Aligned_cols=321 Identities=17% Similarity=0.135 Sum_probs=188.7
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 9 PSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
..+|.+++++.+.......++ +++...+|++.++++++. +.++++++|++++..++..... .++|.|++.+++|...
T Consensus 17 ~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~-~~~~~~~~Gs~a~~~~l~~~~~-~~gd~Vl~~~~~~~~~ 93 (353)
T PLN02721 17 KPTDAMRAAMANAEVDDDVLG-YDPTALRLEEEMAKIFGK-EAALFVPSGTMGNLISVLVHCD-VRGSEVILGDNSHIHL 93 (353)
T ss_pred CCCHHHHHHHHhccCCCcccC-CCHHHHHHHHHHHHHhCC-ceeEEecCccHHHHHHHHHHcc-CCCCeEEEcCccceeh
Confidence 367888888876411222333 355578999999999974 3467777899998877765522 2678899988876433
Q ss_pred chh--hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC----CCCeEEEEEcccCCCCCcccCCHHH
Q 017633 89 ADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 89 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
... .....|..+.. ++..... ..|++++++.+++. .+++++++++++++++|....+.++
T Consensus 94 ~~~~~~~~~~g~~~~~--v~~~~~~------------~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~ 159 (353)
T PLN02721 94 YENGGISTLGGVHPRT--VKNNEDG------------TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEY 159 (353)
T ss_pred hcccchhhhcCceeEe--cCCCcCC------------CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHH
Confidence 221 22222332221 1111100 01799999999742 1367888888877765555555666
Q ss_pred HHHHHHHHHHhCCEEEEehhhhchhcc-cCccccccCCCcc--hhhhhhhccCCcccee-eeehHHHHHHhcCCCCcccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPD--LTTLGKIIGGGLPVGA-YGGRRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~~~g-~~~~~~~~~~~~d--i~s~sK~~~~G~~iG~-v~~~~~~~~~~~~~~~~~~~ 238 (368)
+++|.++|++||+++|+||+|...... ............| +.++||++++ ++|+ ++.++++++.+......
T Consensus 160 l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~~~~~~~~~~~~~~~~~--- 234 (353)
T PLN02721 160 TDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVIVGSKSFIRKAKRLRKT--- 234 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEEecCHHHHHhHHHHHHh---
Confidence 999999999999999999998521100 0011111111122 4578999974 4666 56788877765421111
Q ss_pred ccCCCCHH--HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhcc
Q 017633 239 GTLSGNPL--AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 239 ~t~~~~~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
...+.+.. .++++..+++... + ..++..++++.+++.|++. .+... .....++++++.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~---------- 299 (353)
T PLN02721 235 LGGGMRQVGVLAAAALVALQENV-P-KLEDDHKKAKLLAEGLNQI---KGLRVNVAAVETNIVYFDITDG---------- 299 (353)
T ss_pred cCCCeehhHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhC---CCcEEecCCccceEEEEEccCC----------
Confidence 11111222 2223333333211 1 2233344555555555543 12211 1123345666665311
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|.++||.+.+++...+|+ ++.++++|+++++++|++++..
T Consensus 300 -~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 300 -SRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred -ccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 01235789999999999999987666665 4567999999999999998764
No 213
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=2.4e-22 Score=182.72 Aligned_cols=323 Identities=16% Similarity=0.164 Sum_probs=201.6
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCC--CCChhHHHHHHHHHhhCC-CC--CeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~-~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.+|-.+.+++.+++.....+. ...+...++++.++++++ .. +.+++++|||++++.++..+. .+++++++
T Consensus 6 l~~pgp~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--~~~~~vlv 83 (363)
T TIGR02326 6 LLTPGPLTTSRTVKEAMLFDWCTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--PKDGKLLV 83 (363)
T ss_pred EecCCCCCCCHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--CCCCeEEE
Confidence 456666666666666654432221 123456677888999887 33 479999999999999996552 35567777
Q ss_pred EcCCCCCCch-hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
...++++... ......|.++.....+..... |+++++++++.+ ++++.+.+..+.+++|...+
T Consensus 84 ~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~--------------d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~- 147 (363)
T TIGR02326 84 VINGAYGARIVQIAEYLGIPHHVVDTGEVEPP--------------DVVEVEAILAAD-PAITHIALVHCETTTGILNP- 147 (363)
T ss_pred EeCChhhHHHHHHHHHcCCceEEEeCCCCCCC--------------CHHHHHHHHhhC-CCccEEEEEeecCCccccCc-
Confidence 6666666532 222333433332222211111 799999999864 23455555555667888888
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC-cc--
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-MY-- 236 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~-~~-- 236 (368)
+++|.++|++||+++|+|++|+ + .+.......++.+.-+.+++|+++|+.++|+++++++.++.+..... ..
T Consensus 148 ---i~~I~~l~~~~g~~livD~~~~-~-g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~ 222 (363)
T TIGR02326 148 ---IEAVAKLAHRHGKVTIVDAMSS-F-GGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLD 222 (363)
T ss_pred ---HHHHHHHHHHcCCEEEEEcccc-c-cCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeec
Confidence 9999999999999999998885 2 11223344454433345788999876678999998887776542111 00
Q ss_pred ------------ccccCCCCHHHHHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccce
Q 017633 237 ------------QAGTLSGNPLAMTAGIHTLKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGM 297 (368)
Q Consensus 237 ------------~~~t~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~ 297 (368)
....|+.+...+.+..++++.+.+++ ..+++.++++++++.|++. ++..... ..+..
T Consensus 223 ~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 298 (363)
T TIGR02326 223 LYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL----GFEPLLDDEIQSPII 298 (363)
T ss_pred HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----CCeeccCcccCCceE
Confidence 01234567778888888887765432 3345555555555555443 3221111 11223
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC---Cccccc--cCCCHHHHHHHHHHHHHHHh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTS--LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---~~~~~~--~~~~~~~i~~~~~~l~~~l~ 366 (368)
.++.+... ...+..++.+.|.++||.++++.. ..+|++ ...+.+|+++++++|++++.
T Consensus 299 ~~~~~~~~-----------~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 299 TSFYSPED-----------PDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EEEECCCC-----------CCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 34443110 012356789999999999998853 235553 45699999999999998864
No 214
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=4.8e-22 Score=183.11 Aligned_cols=320 Identities=16% Similarity=0.153 Sum_probs=203.1
Q ss_pred cCCCcHHHHHHHHHHHHcCCCC---CC------CChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHH--Hhc
Q 017633 7 LFPSYLQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLAR--AFT 73 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~---~~------~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~--~~~ 73 (368)
.|..++.+.+++.+++...... +. ..+..+++++.++++++ +.++|++++|+|+++..++.... ...
T Consensus 28 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~ 107 (401)
T PRK10874 28 TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQ 107 (401)
T ss_pred ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCC
Confidence 3456678999998888652111 10 12456788899999997 47899999999999999986652 134
Q ss_pred CCceEEEEcCCCCCCchhhh---hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 74 GRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
++++|++.++.|++...... ...|..+...+... .+. .|++++++.++ ++++++++..++
T Consensus 108 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~-------------~d~~~l~~~i~---~~t~lv~i~~~~ 170 (401)
T PRK10874 108 PGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DRL-------------PDVDLLPELIT---PRTRILALGQMS 170 (401)
T ss_pred CcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CCc-------------CCHHHHHHhcC---cCcEEEEEeCCc
Confidence 67899999888776433222 22333332221111 111 17999999996 467888887777
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHH
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
+++|...+ +++|.++|+++|+++|+|++|+-.. .......+ .+|+. +++|.+++ .++|++++++++++.
T Consensus 171 n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~~g~--~~~~~~~~--~~d~~~~s~~K~~gp-~G~G~l~~~~~~~~~ 241 (401)
T PRK10874 171 NVTGGCPD----LARAITLAHQAGMVVMVDGAQGAVH--FPADVQAL--DIDFYAFSGHKLYGP-TGIGVLYGKSELLEA 241 (401)
T ss_pred ccccCcCC----HHHHHHHHHHcCCEEEEECCccccc--ccCCchhc--CCCEEEEecccccCC-CccEEEEEchHHHhc
Confidence 88898888 9999999999999999999995210 11222233 35654 55697762 257999999988876
Q ss_pred hcCCC---Cc---------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 017633 229 VAPAG---PM---------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAI 289 (368)
Q Consensus 229 ~~~~~---~~---------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~ 289 (368)
+.... .. ...-..+.|..++.++.++++.+.+.++ +++.++...+++.+.+.+.+. +...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~-~~~~~~~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 242 MSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI-NQAESWSRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred CCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 64211 00 0001114566677788888887755443 223444444444444433333 2221
Q ss_pred EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------------Cccc--cccCCCHHHHH
Q 017633 290 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGF--TSLAHSSDDIQ 355 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------------~~~~--~~~~~~~~~i~ 355 (368)
......+++.+.+. .....++.+.|.++||.++++.. ..+| +...++++|++
T Consensus 321 ~~~~~~~i~~~~~~--------------~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid 386 (401)
T PRK10874 321 FRCQDSSLLAFDFA--------------GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD 386 (401)
T ss_pred eCCCCCcEEEEEEC--------------CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHH
Confidence 11233445555542 11246788899999999987642 2344 35667999999
Q ss_pred HHHHHHHHHHhh
Q 017633 356 HTITAAEKVLRQ 367 (368)
Q Consensus 356 ~~~~~l~~~l~~ 367 (368)
++++.|+++++.
T Consensus 387 ~ll~al~~~~~~ 398 (401)
T PRK10874 387 ALVNAVDRALEL 398 (401)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 215
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=2.7e-22 Score=181.96 Aligned_cols=312 Identities=17% Similarity=0.169 Sum_probs=193.3
Q ss_pred cHHHHHHHHHHHHcCCCCCCC--ChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 11 YLQVLAALGETMKKGTSFGAP--CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
++.+.+++.+.+. .+.++ .+..+++++.+++.++ + .+.+++++||++++..++... ..+++.|++...+++
T Consensus 11 ~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~--~~~g~~vl~~~~~~~ 85 (356)
T cd06451 11 PPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL--LEPGDKVLVGVNGVF 85 (356)
T ss_pred CHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh--CCCCCEEEEecCCch
Confidence 3455555543321 22222 3447789999999997 3 456889999999999998655 246788888876666
Q ss_pred CC-chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 87 GH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
+. ........|.++.......... .|++++++.+++ ++++++++.++++++|.+.+ +++
T Consensus 86 ~~~~~~~~~~~g~~~~~v~~~~~~~--------------~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~ 145 (356)
T cd06451 86 GDRWADMAERYGADVDVVEKPWGEA--------------VSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEG 145 (356)
T ss_pred hHHHHHHHHHhCCCeEEeecCCCCC--------------CCHHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHH
Confidence 53 2233333344333221111111 179999999974 25677777666677888888 999
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC---CCCcc------
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP---AGPMY------ 236 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~---~~~~~------ 236 (368)
|.++|+++|+++++|++|+ + .+.......++.+.-+.+.+|+++++.++|+++.++++++.+.. ....+
T Consensus 146 i~~~a~~~~~~li~D~~~~-~-g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T cd06451 146 IGALAKKHDALLIVDAVSS-L-GGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLL 223 (356)
T ss_pred HHHHHHhcCCEEEEeeehh-c-cCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHH
Confidence 9999999999999999985 1 11112222333333334668999976789999998888777652 00010
Q ss_pred -------ccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEE--ee-ccceEEEEee
Q 017633 237 -------QAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICG--GY-ISGMFGFFFT 303 (368)
Q Consensus 237 -------~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~-~~~~~~~~~~ 303 (368)
.....+.+...++++.++++.+...+ ..++..++.+++++.|.+. +..... .. .+.+.++.+
T Consensus 224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~- 298 (356)
T cd06451 224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL----GLKLLAKPELRSPTVTAVLV- 298 (356)
T ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----CCeeccCcccCCCceEEEEC-
Confidence 01222345666677778887765432 3455555566666665553 322111 11 112223332
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCCC----cccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFE----AGFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~----~~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+...+..++++.|.++ ||.+.++..+ .+|+ ...++++|+++++++|+++++
T Consensus 299 ------------~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 299 ------------PEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ------------CCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 1222357899999998 9999876322 3454 456799999999999998763
No 216
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=4.9e-22 Score=181.04 Aligned_cols=328 Identities=16% Similarity=0.155 Sum_probs=198.7
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCC--CChhHHHHHHHHHhhCCC---CCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGA--PCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~---~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.|+.+|-.+.+++.+++.....+.. ..+...++++.++++++. .+.+++++||+++++.++..+. .+++.+++
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--~~~~~vlv 85 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDWGSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--PRDGKVLV 85 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--CCCCeEEE
Confidence 3555555555555555544222221 235678899999999873 2568899999999999997662 35677888
Q ss_pred EcCCCCCCch-hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
...++++... ......|..+........... |++++++.++++ ++++++.+..+++++|...+
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~--------------d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~- 149 (368)
T PRK13479 86 PDNGAYGARIAQIAEYLGIAHVVLDTGEDEPP--------------DAAEVEAALAAD-PRITHVALVHCETTTGILNP- 149 (368)
T ss_pred EeCCchHHHHHHHHHHcCCcEEEEECCCCCCC--------------CHHHHHHHHHhC-CCCcEEEEEcccCccccccC-
Confidence 7776666432 222333443332222111111 799999998754 24555555555666788888
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc---
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY--- 236 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~--- 236 (368)
+++|.++|+++|+++|+|++|. + .........++.+.-+.+++|++.|+.++||+++++++++.+.......
T Consensus 150 ---~~~i~~l~~~~~~~livDa~~~-~-g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 150 ---LDEIAAVAKRHGKRLIVDAMSS-F-GAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLD 224 (368)
T ss_pred ---HHHHHHHHHHcCCEEEEEcccc-c-CCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeec
Confidence 9999999999999999997663 3 1112233334433234578899876556899999998887766422110
Q ss_pred -----------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEEEEe
Q 017633 237 -----------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFF 302 (368)
Q Consensus 237 -----------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~ 302 (368)
....++.+..++.++.++++.+.+++..++..++....++.+.+.+.+.++..... .......+.+
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEEC
Confidence 11124667777777778887664433223333344444444444443344321111 1111222222
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC---ccccc--cCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE---AGFTS--LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~---~~~~~--~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. +...+..++.+.|.++||.++++... .+|++ ...+++|++++++.|++++.+
T Consensus 305 ~~-----------~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 305 PA-----------DPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred CC-----------CCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 11 01123578999999999999886432 34553 455999999999999999865
No 217
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.91 E-value=1e-21 Score=181.39 Aligned_cols=336 Identities=13% Similarity=0.035 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh
Q 017633 13 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 92 (368)
Q Consensus 13 ~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~ 92 (368)
.+.+++.+++..+...|.+.....+|+++++++++. +.+++|+||++|+..++... ..++| |++.++.|..+ ...
T Consensus 58 a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~-~~vv~t~ggt~A~~~~~~al--l~pGD-Vii~~p~~~~~-~~~ 132 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY-PYTIPTHQGRAAEQILFPVL--IKKGD-VVPSNYHFDTT-RAH 132 (460)
T ss_pred hhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC-CcEEECCCHHHHHHHHHHHh--CCCCC-EEccCCcccch-HHH
Confidence 588888888866555556777889999999999963 57899999999999998765 35677 77766655544 444
Q ss_pred hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 93 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
....|...+.......... ...+-.... -|+++|++.++.+. +++++++++..+|++|....+.+.+++|+++|+
T Consensus 133 i~~~G~~~v~v~~~~~~~~---~~~~~f~g~-id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~ 208 (460)
T PRK13238 133 IELNGATAVDLVIDEALDT---GSRHPFKGN-FDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAK 208 (460)
T ss_pred HHHcCCEEEEEeccccccc---cccccccCC-cCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHH
Confidence 4444443332222110000 000000000 18999999998532 468888877766666544555555999999999
Q ss_pred HhCCEEEEehhhhc--h-hccc---Cc-cccccCCCcchhhhhhhcc-CCccc-----e-eeeeh-HHHHHHhcCCCCcc
Q 017633 172 ENGALLIFDEVMTG--F-RLAY---GG-AQEYFGVTPDLTTLGKIIG-GGLPV-----G-AYGGR-RDIMEMVAPAGPMY 236 (368)
Q Consensus 172 ~~~~~li~De~~~~--~-~~g~---~~-~~~~~~~~~di~s~sK~~~-~G~~i-----G-~v~~~-~~~~~~~~~~~~~~ 236 (368)
+||++||+|++|.. . +... .. .....++...+.+++|.+. +|+++ | +++.+ +++++.++......
T Consensus 209 ~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~ 288 (460)
T PRK13238 209 KYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILY 288 (460)
T ss_pred HcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhccccc
Confidence 99999999998842 1 1100 00 0000011112335566665 45544 4 44555 57888876433222
Q ss_pred c-cccCCCCHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 237 Q-AGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 237 ~-~~t~~~~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
+ ..|+++.... +.++..+++...++++.+...++++++.+.|.+ .+++...+..++++.+++..-....
T Consensus 289 ~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~----~G~~~~~p~Gg~~v~~d~~~~~~~~----- 359 (460)
T PRK13238 289 EGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEE----AGVPIQTPAGGHAVFVDAGKFLPHI----- 359 (460)
T ss_pred CCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHH----CCCCeEccCCceEEEEEchhcCCCC-----
Confidence 2 2366665555 555555565443455566666666777766665 4565555566667666664311000
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCCCC-----------------cccccc---CCCHHHHHHHHHHHHHHHh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQFE-----------------AGFTSL---AHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~~~-----------------~~~~~~---~~~~~~i~~~~~~l~~~l~ 366 (368)
......+.+++.+|. +.||.+.+++.. .+|+.+ .-+.++++++.++|+++.+
T Consensus 360 ~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 360 PAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred CCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 001112367888777 569999886411 123332 3388999999999998763
No 218
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.91 E-value=4.3e-22 Score=163.23 Aligned_cols=313 Identities=21% Similarity=0.243 Sum_probs=209.5
Q ss_pred ceeccCC-CcHHHHHHHHHHHHcC-C-----CC-CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFP-SYLQVLAALGETMKKG-T-----SF-GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~-~~~~v~~a~~~~~~~~-~-----~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.+|++|. .||++.++-.++++.. . .+ -.+...+..|...+++..+. ++.++.+++.+|+..++... .++
T Consensus 74 aNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r-ED~ilypscfdANag~feai--l~p 150 (417)
T KOG1359|consen 74 ANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR-EDTILYPSCFDANAGAFEAI--LTP 150 (417)
T ss_pred ccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC-CceEEeccccccchHHHHHh--cCh
Confidence 4688888 8999999999999872 1 11 12346778888888888754 45556667999998888655 234
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGNS 153 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~~ 153 (368)
.+-|+. +.-.|++..-.+.+.. +..+.|+-+++..+.+. +-+.++++.+...+|.
T Consensus 151 edAvfS-DeLNhASIIdGirLck-----------------------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMD 206 (417)
T KOG1359|consen 151 EDAVFS-DELNHASIIDGIRLCK-----------------------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMD 206 (417)
T ss_pred hhhhhc-cccccchhhhhhHHHh-----------------------hhccchhHHHHHHHHHhhhheEEEEEecceeccC
Confidence 433333 4444554332222211 11122666666555432 2368899999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCC--Ccchh--hhhhhccCCccceeeeehHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
|.+.| |++|.++++|||.+|++||.| ++| .....+..+.+++ .+|++ |++|++|| --.||..++..++.
T Consensus 207 GdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg-a~GGyttgp~~li~ 281 (417)
T KOG1359|consen 207 GDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG-ASGGYTTGPKPLIS 281 (417)
T ss_pred CCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC-CCCCCccCChhHHH
Confidence 99999 999999999999999999999 666 3223345566775 35554 79999973 34678899999999
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.++++.+.+..++ +.+|.....+.++++.+. +.....+...+.+++++.++..+... .....++..+.+.
T Consensus 282 llrqr~RpylFSn-slppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGftI-----sg~~hPI~pv~lG--- 352 (417)
T KOG1359|consen 282 LLRQRSRPYLFSN-SLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGFTI-----SGASHPICPVMLG--- 352 (417)
T ss_pred HHHhcCCceeecC-CCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCcee-----cCCCCCccceecc---
Confidence 9998765555444 333333333444555443 34456677777788877776643221 1111233344332
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc---------ccccCCCHHHHHHHHHHHHHHHh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG---------FTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~---------~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+...+..+++.|+++||++.....|.+ .++..+++||++++++++.++.+
T Consensus 353 ----------da~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 353 ----------DARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred ----------cHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 444567899999999999987765543 35788899999999999988764
No 219
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=2.2e-22 Score=180.85 Aligned_cols=316 Identities=16% Similarity=0.090 Sum_probs=188.6
Q ss_pred CceeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 2 PQLIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 2 ~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+.++-+ .+|.+++++.+...... .+++.....+|++.++++++- +.+++++||++++..++... ..+++.|++.
T Consensus 5 ~~~~~~~-p~~~~~~a~~~~~~~~~-~Y~~~~~~~~L~~~la~~~g~-~~~~v~~~g~~a~~~~l~~~--~~~gd~vi~~ 79 (333)
T PRK10534 5 RSDTVTR-PSRAMLEAMMAAPVGDD-VYGDDPTVNALQDYAAELSGK-EAALFLPTGTQANLVALLSH--CERGEEYIVG 79 (333)
T ss_pred ccccCCC-CCHHHHHHHHhccCCCc-ccCCCHHHHHHHHHHHHHhCC-CeEEEeCchHHHHHHHHHHh--cCCCCeeEEe
Confidence 4566666 88999999977554433 333778899999999999874 34467778999988887654 3456778876
Q ss_pred cCCCCCCchhh-hhhcC-CCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---CCeEEEEEcccCCCCCcc
Q 017633 82 EGCYHGHADPF-LVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 82 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~~~~~~~~~~~~~~~g~~ 156 (368)
.++|....... ....+ ......... .++. .|+++++++++.+. .++++++++.+ + +|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~d~~~l~~~i~~~~~~~~~~~lv~l~np-~-~G~v 143 (333)
T PRK10534 80 QAAHNYLYEAGGAAVLGSIQPQPIDAA-ADGT-------------LPLDKVAAKIKPDDIHFARTRLLSLENT-H-NGKV 143 (333)
T ss_pred chhhhhHhcCCchHHhcCceEEeecCC-CCCC-------------CCHHHHHHhhcccCcCcccceEEEEecC-C-CCee
Confidence 55443211110 11111 111110000 0111 17999998886310 14666666532 2 4766
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhchhc---ccCccccccCCCc-chhhhhhhccCCccce-eeeehHHHHHHhcC
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGFRL---AYGGAQEYFGVTP-DLTTLGKIIGGGLPVG-AYGGRRDIMEMVAP 231 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~---g~~~~~~~~~~~~-di~s~sK~~~~G~~iG-~v~~~~~~~~~~~~ 231 (368)
.+.++ +++|.++|++|+++|++||+|..... +... .......+ -+++|||+++. ++| |+++++++++.+..
T Consensus 144 ~~~~~-l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~-~~~~~~~~~~~~s~SK~~~~--~~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 144 LPREY-LKQAWEFTRERNLALHVDGARIFNAVVAYGCEL-KEITQYCDSFTICLSKGLGT--PVGSLLVGNRDYIKRARR 219 (333)
T ss_pred cCHHH-HHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH-HHHHhcCCEEEEEeEcCCCC--cccceEEcCHHHHHHHHH
Confidence 66544 99999999999999999999862211 1110 00011111 24589998863 478 57788988887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
.... .+..++.+.++++++.++++.. ....++..++++++.+.|++ .+.. ...+.++++++.+.
T Consensus 220 ~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~----~g~~-~~~~~~nfv~~~~~-------- 283 (333)
T PRK10534 220 WRKM-TGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLRE----AGAD-VMRQDTNMLFVRVG-------- 283 (333)
T ss_pred HHHH-hCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHh----CCCc-cCCCCceEEEEECC--------
Confidence 2111 1111223345566666665421 12233344445556666655 3432 22335667776652
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..+..++.+.|.++||.++++. .+++ .+.++++++++++++|++++.
T Consensus 284 ------~~~~~~~~~~l~~~gi~v~~~~--~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 284 ------EEQAAALGEYMRERNVLINASP--IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------chhHHHHHHHHHHcCeeecCCc--eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 1235678899999999999874 2333 335799999999999998775
No 220
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=7.6e-22 Score=179.35 Aligned_cols=304 Identities=12% Similarity=0.095 Sum_probs=182.2
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 112 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (368)
+...++.+.++++++- +.+.+++||++++..++..+. .+++.|++....++... ..+...|.++............
T Consensus 51 ~~~~~~~e~lA~~~g~-~~~~i~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~~~~~~~~ 126 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGM-DEARVTHGAREGKFAVMHALC--KEGDWVVLDGLAHYTSY-VAAERAGLNVKEVPHTGHPEYK 126 (370)
T ss_pred hHHHHHHHHHHHHhCC-CceEEECChHHHHHHHHHHhh--CCCCEEEECCcccHHHH-HHHHHcCCEEEEEecCCcccCC
Confidence 3567888889998863 356678999999999887663 46677887665554433 3333344333221110000000
Q ss_pred CCCCCcccccCCCCHHHHHHHHHcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 113 KGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 113 ~~~~~~~~~~~~~d~~~le~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
.|++++++.++.. .+++++++++.+++++|...+ +++|.++|++||+++|+||+|+....
T Consensus 127 ------------~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea~~~g~~ 190 (370)
T TIGR02539 127 ------------VDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCAYTVGRM 190 (370)
T ss_pred ------------cCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECccccCCc
Confidence 1899999998641 125667777777777888888 99999999999999999999963210
Q ss_pred ccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcccccc-----CCCCHHHHHHHHHHHHHHccC-C
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT-----LSGNPLAMTAGIHTLKRLKEP-G 262 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t-----~~~~~~~~~a~~~~l~~~~~~-~ 262 (368)
+ .....++...-+.|+||++++|.|+||+++++++++.+......+..++ .+....++.++.++++...+. .
T Consensus 191 ~--~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~ 268 (370)
T TIGR02539 191 P--VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVK 268 (370)
T ss_pred C--CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHH
Confidence 1 1111223222346899999976789999999999988875432211111 011122455555555532110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCce--EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCee-ecCCC
Q 017633 263 TYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPSQ 339 (368)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-~~~~~ 339 (368)
...+..++.+++++.|+++ ++.. ..+..++++.+.+.. .... ...+......+.+.|+++||. ++++.
T Consensus 269 ~~~~~~~~~~~l~~~L~~~----g~~~~~~~~s~t~~v~~~~~~--~~~~---~~~~~~~~~~~~~~L~e~GI~~ir~~~ 339 (370)
T TIGR02539 269 RWDEEVKKTRWFVAELEDI----GFIQLGQKPKEHDLVKFETPG--FHEI---AQKHKRRGYFLYEELKKRGIHGIRSGQ 339 (370)
T ss_pred HHHHHHHHHHHHHHHHHhC----CcEEEccCCCcCceEEEECCc--hhHH---hhhhccccHHHHHHHHhCCCccccCCc
Confidence 1122233344566666553 4321 113345565555311 0000 000111235789999999997 77755
Q ss_pred CCccccc-cCCCHHHHHHHHHHHHHHHhh
Q 017633 340 FEAGFTS-LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 340 ~~~~~~~-~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+|++ ...+++|+++++++|++++++
T Consensus 340 ~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 340 TKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 4456665 456999999999999998865
No 221
>PLN02368 alanine transaminase
Probab=99.91 E-value=4.4e-23 Score=188.06 Aligned_cols=206 Identities=14% Similarity=0.063 Sum_probs=137.6
Q ss_pred CChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCcccc
Q 017633 31 PCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 103 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 103 (368)
+.....+|++.+++++ + .+++|++|+|+++++..++..+.. .++|.|++..++|..+...+... |..+...
T Consensus 105 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~pGd~Vli~~P~Y~~y~~~~~~~-g~~~v~v 182 (407)
T PLN02368 105 DSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR-GEKDGVLVPVPQYPLYSATISLL-GGTLVPY 182 (407)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC-CCCCEEEEeCCCCccHHHHHHHc-CCEEEEE
Confidence 3344556666666654 3 468999999999999998876521 36789999999998875444433 3333222
Q ss_pred CCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---CCeE-EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 104 GLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIA-AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~~~~-~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++....++. -|++++++.++... .+++ +++++| +|++|.+++ .+.+++|+++|++||+++|+
T Consensus 183 ~~~~~~~~~------------~d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v~s-~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 183 YLEESENWG------------LDVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQCLS-EANLREILKFCYQERLVLLG 248 (407)
T ss_pred ecccccCCC------------CCHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCccCC-HHHHHHHHHHHHHcCCEEEE
Confidence 221111111 17999999987411 1466 455555 555666565 55599999999999999999
Q ss_pred ehhhhch-hccc--Cccccc----c-------CCCcchhhhhhhc-c-CCccceeee---ehHHHHHHhcCCCCcccccc
Q 017633 180 DEVMTGF-RLAY--GGAQEY----F-------GVTPDLTTLGKII-G-GGLPVGAYG---GRRDIMEMVAPAGPMYQAGT 240 (368)
Q Consensus 180 De~~~~~-~~g~--~~~~~~----~-------~~~~di~s~sK~~-~-~G~~iG~v~---~~~~~~~~~~~~~~~~~~~t 240 (368)
||+|.++ +.+. ..+... + +....+.||||.| + +|||+||++ +++++++.+... ...+
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~----~~~~ 324 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV----ASIA 324 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH----hccc
Confidence 9999888 5442 112111 1 1223356899999 5 899999998 478888877632 1235
Q ss_pred CCCCHHHHHHHHHHHH
Q 017633 241 LSGNPLAMTAGIHTLK 256 (368)
Q Consensus 241 ~~~~~~~~~a~~~~l~ 256 (368)
++.+.+++.++.++++
T Consensus 325 ~~~~~~~Q~aa~~~l~ 340 (407)
T PLN02368 325 LSPNVSGQIFMGLMVN 340 (407)
T ss_pred CCCCcHHHHHHHHHhC
Confidence 5778899999888875
No 222
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=4.7e-22 Score=179.23 Aligned_cols=318 Identities=18% Similarity=0.120 Sum_probs=193.0
Q ss_pred CceeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 2 PQLIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 2 ~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+-+++| .+|.+++++.++..... .+++.+...++++.++++++ .+++++++||++++..++..+ ..+++.|++.
T Consensus 3 ~~~~~~~-~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~~~~l--~~~gd~v~~~ 77 (338)
T cd06502 3 RSDTVTG-PTPEMLEAMAAANVGDD-VYGEDPTTAKLEARAAELFG-KEAALFVPSGTAANQLALAAH--TQPGGSVICH 77 (338)
T ss_pred ccccCCC-CCHHHHHHHHhcccCCc-ccCCCHHHHHHHHHHHHHhC-CCeEEEecCchHHHHHHHHHh--cCCCCeEEEe
Confidence 3567888 88899999988654322 33466788999999999998 668888889999999888765 3467788876
Q ss_pred cCCCCCCchh--hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC----CCeEEEEEcccCCCCCc
Q 017633 82 EGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVVGNSGF 155 (368)
Q Consensus 82 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~----~~~~~~~~~~~~~~~g~ 155 (368)
+++|...... .....|.++...... ... .|++++++++++.. ++++++++++.+++ |.
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~-------------~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~ 141 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE--NGK-------------LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GT 141 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC--CCc-------------CCHHHHHHHhhccCCCcCCcceEEEEEeecCC-cc
Confidence 6655432221 122233332221111 111 18999999997521 25666666655554 54
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch---hcccCccccccCCCcc--hhhhhhhccCCcccee-eeehHHHHHHh
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPD--LTTLGKIIGGGLPVGA-YGGRRDIMEMV 229 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~---~~g~~~~~~~~~~~~d--i~s~sK~~~~G~~iG~-v~~~~~~~~~~ 229 (368)
+. +.+.+++|+++|++||+++|+||+|..+ ..+. ....+...+| +.++||+++. +.|+ ++.++++++.+
T Consensus 142 ~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~~~~~~~~~ 216 (338)
T cd06502 142 VY-PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVGNRDFIARA 216 (338)
T ss_pred cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEECCHHHHHHH
Confidence 45 4444999999999999999999998432 1121 1222222334 3478999973 2244 45688888777
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
.... ...+++++.+++.++++.++++.-......+++.++++++++.|++. +.. .....++++.+.+..
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~v~~~~----- 285 (338)
T cd06502 217 RRRR-KQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GGL-ESEVQTNIVLLDPVE----- 285 (338)
T ss_pred HHHH-HHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CCC-cccccCCeEEEecCC-----
Confidence 6311 11223445566677776666642101223455556666666666553 321 122334454444311
Q ss_pred cchhcccccHHHHHHHHHHH---HcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHH
Q 017633 310 FEDAKKSETTKFARFYRGML---EEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~---~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~ 363 (368)
......++.+.+. ++|+.+.+.+...+| +++.++++|++++++++++
T Consensus 286 -------~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 286 -------ANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred -------ccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 1122344444443 689999876545555 4677799999999999875
No 223
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.5e-21 Score=178.33 Aligned_cols=329 Identities=12% Similarity=0.018 Sum_probs=201.3
Q ss_pred eccCCCcHHHHHHHHHHHHcCCC-----C--C-CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 5 IILFPSYLQVLAALGETMKKGTS-----F--G-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~-----~--~-~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
--.|..++.+++++.++.....+ + + ...+...++++.++++++- +++++++|+++++..++..+ ..+++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~-~~~~~~~g~t~a~~~al~~l--~~~gd 103 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM-DEARVTHGAREGKFAVMHSL--CKKGD 103 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh--cCCCC
Confidence 34677888999999998754211 1 1 1234688999999999964 46788999999999999766 34677
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcC----CCCeEEEEEcccCC
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVG 151 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~----~~~~~~~~~~~~~~ 151 (368)
.|++...+++... ..+...|..+...... ...+. .|++++++.++++ .+++++++++.+++
T Consensus 104 ~Vlv~~~~h~s~~-~~~~~~G~~~~~v~~~~~~~~~-------------~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~ 169 (387)
T PRK09331 104 YVVLDGLAHYTSY-VAAERAGLNVREVPKTGYPEYK-------------ITPEAYAEKIEEVKEETGKPPALALLTHVDG 169 (387)
T ss_pred EEEECCCchHHHH-HHHHHcCCEEEEEeCccCcCCC-------------cCHHHHHHHHHHhhhccCCCCEEEEEECCCC
Confidence 8888665544433 2334444433221110 01111 1799999999753 13678888887777
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhc
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~ 230 (368)
++|...+ +++|+++|++||+++|+|++|+ .|. .+....++.+..+.+++|+++++.++|++++++++++.+.
T Consensus 170 ~tG~~~~----l~~I~~la~~~g~~livD~a~~---~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~ 242 (387)
T PRK09331 170 NYGNLAD----AKKVAKVAHEYGIPFLLNGAYT---VGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVF 242 (387)
T ss_pred CCccccc----HHHHHHHHHHcCCEEEEECCcc---cCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcc
Confidence 7888888 9999999999999999999996 222 2233345554456688899997779999999998888765
Q ss_pred CCCCcc-------ccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE--eeccceEEE
Q 017633 231 PAGPMY-------QAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICG--GYISGMFGF 300 (368)
Q Consensus 231 ~~~~~~-------~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~ 300 (368)
.....+ .+.+ .++...+++.++++.+.+ ....++..++.+++++.|+++. ++.... ....+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~~~~~~~~~~~i~~~ 317 (387)
T PRK09331 243 RTSRKFGVKEVELLGCT--LRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE---GFKQLGEKPRNHDLMKF 317 (387)
T ss_pred cccCCCcccceeeecee--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEeccCcCcCCeEEE
Confidence 432111 1111 222334444445544322 1123344555556666665530 221110 122334333
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeec-CCCCCcccc-ccCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA-PSQFEAGFT-SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~~~~~~~~-~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.. .+.. . .......+.++.+.|.++||... ++....+++ +...+++|+++++++|++++.+
T Consensus 318 ~~~--~~~~--~-~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 318 ETP--SFDE--I-AKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred eCC--chhH--H-hhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 321 0000 0 00011223679999999999843 333333343 4457999999999999998764
No 224
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=1.3e-21 Score=178.53 Aligned_cols=316 Identities=18% Similarity=0.128 Sum_probs=194.5
Q ss_pred CCCcHHHHHHHHHHHHcCCCC----CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh--cCCceEEE
Q 017633 8 FPSYLQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TGRERIIK 80 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--~~~~~vi~ 80 (368)
.+.+|.+++++.+++...... ....+...+++++++++++ +...+++++||++++..+++.++.. .++++|++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 457889999998888753111 1122344789999999987 4557888999999999998776543 24567877
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.+.+++. ........|.++...+... .+. .|++++++.++. +++.+++...++++|.+.+
T Consensus 110 ~~~~h~s-~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~-- 169 (371)
T PRK13520 110 PESAHFS-FDKAADMLGVELRRAPLDD-DYR-------------VDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP-- 169 (371)
T ss_pred cCcchHH-HHHHHHHcCceEEEecCCC-CCc-------------CCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC--
Confidence 7665443 2222233333322211110 111 179999999973 4555554455566788888
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-h-ccc-C--ccccccCCCcchhhh--hhhccCCccceeeee-hHHHHHHhcCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-R-LAY-G--GAQEYFGVTPDLTTL--GKIIGGGLPVGAYGG-RRDIMEMVAPA 232 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~-~g~-~--~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~-~~~~~~~~~~~ 232 (368)
+++|.++|++||+++++|++|+++ . ... . +..... ..|.+++ .|...+|.|+|+++. ++++++.+...
T Consensus 170 --l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~ 245 (371)
T PRK13520 170 --IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVD 245 (371)
T ss_pred --HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHhhccc
Confidence 999999999999999999999755 1 111 1 111112 2354443 475446789998765 56676665421
Q ss_pred CCccccc-----cCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 233 GPMYQAG-----TLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 233 ~~~~~~~-----t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
.++..+. ..+.+...++++.++++.+.+++ ..++..++++++++.|++ .++........+++.+.+.
T Consensus 246 ~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~v~~~~~- 320 (371)
T PRK13520 246 TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKE----RGFEPVIEPVLNIVAFDDP- 320 (371)
T ss_pred CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCceEEEEecC-
Confidence 1111100 01223445677777887665443 445555555665555554 3332122333445444431
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-cccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...++.+.|.++||.+..+..+ .+|+ +..++++|++++++.|++++++
T Consensus 321 ---------------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 321 ---------------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred ---------------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 2478899999999999886533 3454 4567999999999999988753
No 225
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.7e-21 Score=174.84 Aligned_cols=316 Identities=21% Similarity=0.204 Sum_probs=218.6
Q ss_pred CcHHHHHHHHHHHHcC---CCCCC------CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHH-hcCCce
Q 017633 10 SYLQVLAALGETMKKG---TSFGA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARA-FTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---~~~~~------~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~-~~~~~~ 77 (368)
.+..|.+++.+++... .+.+. .++..++.++.+++.++ + .+.|+||.|.|+++......... ..++|+
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gde 113 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDE 113 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCE
Confidence 5778999999887652 12121 13467889999999998 5 58999999999999999864421 346699
Q ss_pred EEEEcCCCCCCchhhhhhcCC---CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 78 IIKFEGCYHGHADPFLVKAGS---GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
||+.+-.+|.+.......... .+...+.. .++.. +.++++..++ ++|+++.+..+.+.+|
T Consensus 114 Iv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~-------------~~~~~~~~i~---~~Tklvais~vSn~tG 176 (405)
T COG0520 114 IVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLL-------------DLDALEKLIT---PKTKLVALSHVSNVTG 176 (405)
T ss_pred EEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCc-------------CHHHHHHhcC---CCceEEEEECcccccc
Confidence 999999999988877777533 33333222 23322 7899999887 6899999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
.+.| +++|+++||++|+++++|-+|+ .+. ....+.+ ..|++.|| |++.|..++|.+.+++++.+.+..
T Consensus 177 ~~~p----v~~I~~la~~~ga~v~VDaaq~---~~h~~idv~~l--~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P 247 (405)
T COG0520 177 TVNP----VKEIAELAHEHGALVLVDAAQA---AGHLPIDVQEL--GCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEP 247 (405)
T ss_pred ccch----HHHHHHHHHHcCCEEEEECccc---cCccCCCchhc--CCCEEEEcccccccCCCceEEEEEchHHHhhcCC
Confidence 9999 9999999999999999999995 221 2233333 45888777 877766789999999999888742
Q ss_pred C---CCcc----------------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 017633 232 A---GPMY----------------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG 292 (368)
Q Consensus 232 ~---~~~~----------------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 292 (368)
. +... ..-.-+++.....+..++++.+++-+ .+.+.+.-+.+.+.+.+.+...+......
T Consensus 248 ~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L~~~~~~~L~~~~~v~i~g 326 (405)
T COG0520 248 FLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHERELTEYLLEGLSELPGVEIYG 326 (405)
T ss_pred cccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 1 1100 01111345566666667888776533 23444444444444444443343221111
Q ss_pred ----eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc------------cc--cccCCCHHHH
Q 017633 293 ----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA------------GF--TSLAHSSDDI 354 (368)
Q Consensus 293 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~------------~~--~~~~~~~~~i 354 (368)
....++.|.+.. ....+++..|.++||.++.+..+. +| +.+++|++|+
T Consensus 327 ~~~~~r~~~vsF~v~~--------------~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edi 392 (405)
T COG0520 327 PPDADRGGIVSFNVKG--------------IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDV 392 (405)
T ss_pred CCcccCceEEEEEeCC--------------CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHH
Confidence 245666776632 335899999999999999885442 34 4688899999
Q ss_pred HHHHHHHHHHHh
Q 017633 355 QHTITAAEKVLR 366 (368)
Q Consensus 355 ~~~~~~l~~~l~ 366 (368)
+++++.|+++..
T Consensus 393 d~l~~aL~~~~~ 404 (405)
T COG0520 393 DRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHhh
Confidence 999999998763
No 226
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=2.6e-21 Score=178.19 Aligned_cols=314 Identities=14% Similarity=0.120 Sum_probs=195.2
Q ss_pred CCcHHHHHHHHHHHHcCCC---CCCC-----ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH-hcCCceE
Q 017633 9 PSYLQVLAALGETMKKGTS---FGAP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-FTGRERI 78 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~---~~~~-----~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~-~~~~~~v 78 (368)
..++.+++++.+.+..... ..++ .+..+++++.++++++ ..+.+++++|+++++..++..... ..++++|
T Consensus 28 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~v 107 (397)
T TIGR01976 28 QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEV 107 (397)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 3577899999988765211 1111 2346799999999997 556799999999998877754422 3467788
Q ss_pred EEEcCCCCCCchhh---hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 79 IKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 79 i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
++.++.|++..... ....|..+.........+.. |++++++.++ +++++++++.+++++|.
T Consensus 108 l~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~l~~~i~---~~~~lv~i~~~~n~tG~ 171 (397)
T TIGR01976 108 IVTRLDHEANISPWLQAAERAGAKVKWARVDEATGEL-------------HPDDLASLLS---PRTRLVAVTAASNTLGS 171 (397)
T ss_pred EEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCc-------------CHHHHHHhcC---CCceEEEEeCCCCCCCc
Confidence 88777666543322 22234433322221111111 7899999887 46788888888888898
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+.+ +++|.++|++||+++++|++|. .+. ......++.+.-+.+++|.++ +|+|++++++++++.+.....
T Consensus 172 ~~~----~~~i~~~~~~~~~~~ivD~a~~---~~~~~~~~~~~~~d~~~~s~~K~~g--~~~G~l~~~~~~~~~l~~~~~ 242 (397)
T TIGR01976 172 IVD----LAAITELVHAAGALVVVDAVHY---APHGLIDVQATGADFLTCSAYKFFG--PHMGILWGRPELLMNLPPYKL 242 (397)
T ss_pred cCC----HHHHHHHHHHcCCEEEEehhhh---ccccCCCHHHcCCCEEEEechhhcC--CceEEEEEcHHHHhhCCCccc
Confidence 888 9999999999999999999995 221 122223333222347789884 479999999988877664221
Q ss_pred cccc-------ccCCCCHHHHHHHHHHHHHHccCC-------------HHHHHHHHHHHHHHHHHHHHHhcCCceEEe--
Q 017633 235 MYQA-------GTLSGNPLAMTAGIHTLKRLKEPG-------------TYEYLNKITGELTQGIIDAGKKAGHAICGG-- 292 (368)
Q Consensus 235 ~~~~-------~t~~~~~~~~~a~~~~l~~~~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-- 292 (368)
.... ...+.+....++..++++.+.+.+ ..+.+.++...+++.+.+.+.+.+......
T Consensus 243 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 322 (397)
T TIGR01976 243 TFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVA 322 (397)
T ss_pred cCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 1110 111345556666667777664322 134445555555555555444443111111
Q ss_pred ---eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC---------------Cccc--cccCCCHH
Q 017633 293 ---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---------------EAGF--TSLAHSSD 352 (368)
Q Consensus 293 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---------------~~~~--~~~~~~~~ 352 (368)
..++++.+.+. .....++.+.|.++||.++.+.. ..+| ++..++++
T Consensus 323 ~~~~~~~~~~~~~~--------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 388 (397)
T TIGR01976 323 RLAARVPTVSFTVH--------------GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAE 388 (397)
T ss_pred CccCCCceEEEEeC--------------CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHH
Confidence 13445454431 12246789999999999986521 2344 45678999
Q ss_pred HHHHHHHHH
Q 017633 353 DIQHTITAA 361 (368)
Q Consensus 353 ~i~~~~~~l 361 (368)
|++++++.|
T Consensus 389 di~~l~~~l 397 (397)
T TIGR01976 389 EVDRLLEAL 397 (397)
T ss_pred HHHHHHHhC
Confidence 999998864
No 227
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=6.1e-22 Score=182.45 Aligned_cols=316 Identities=14% Similarity=0.107 Sum_probs=189.4
Q ss_pred eccCCCcHHHHHHHHHHHHcC-CCCCC--------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc-
Q 017633 5 IILFPSYLQVLAALGETMKKG-TSFGA--------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT- 73 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~-~~~~~--------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~- 73 (368)
...||.+|++++++..+. .. ..|.. ..+...++++++++.++ +.+.+.++++|+++.+.++..+...+
T Consensus 28 g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~ 106 (398)
T cd00613 28 GTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYH 106 (398)
T ss_pred cccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhccc
Confidence 456888888888766554 22 12221 12456778888888876 45577778878777777765554322
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCC----CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGS----GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
+++.|++ +..+|+.+.......+. .+....+.. .+ ..|++++++.+. +++++++++++
T Consensus 107 ~gd~Vl~-~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~i~---~~t~~viv~~~ 168 (398)
T cd00613 107 KRNKVLV-PDSAHPTNPAVARTRGEPLGIEVVEVPSDE-GG-------------TVDLEALKEEVS---EEVAALMVQYP 168 (398)
T ss_pred CCCEEEE-cCccCcchHHHHHHhcccCCcEEEEeccCC-CC-------------CcCHHHHHHhcC---CCeEEEEEECC
Confidence 2566665 55677776666655542 221111110 00 017899998886 46888888876
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhcc----CCccceeeeehH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIG----GGLPVGAYGGRR 223 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~----~G~~iG~v~~~~ 223 (368)
+ ++|.+. +++++|+++|++||+++|+|++|.... .......++ +|+ .+++|++. ||+++|++++++
T Consensus 169 ~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~--~~~~~~~~~--~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~ 240 (398)
T cd00613 169 N-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLT--GLKPPGEYG--ADIVVGNLQKTGVPHGGGGPGAGFFAVKK 240 (398)
T ss_pred C-CCceec---chHHHHHHHHHhcCCEEEEEecccccc--CCCChHHcC--CCEEEeeccccCCCCCCCCCceeEEEEhh
Confidence 5 566663 336999999999999999999885320 111112233 454 56788873 368999999998
Q ss_pred HHHHHhcCCC-----------C---------------ccccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHH
Q 017633 224 DIMEMVAPAG-----------P---------------MYQAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGEL 274 (368)
Q Consensus 224 ~~~~~~~~~~-----------~---------------~~~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l 274 (368)
++++.+.... . ....++++.+++.+.++..+++.+.+++ +.++.+++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l 320 (398)
T cd00613 241 ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYL 320 (398)
T ss_pred hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 8877652110 0 0112344555666666666666654433 346667777777
Q ss_pred HHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC---CCCcc--ccccCC
Q 017633 275 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAG--FTSLAH 349 (368)
Q Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~~--~~~~~~ 349 (368)
+++|+++.... .+ .......+++.+.. ....+..++++.|+++||.+... +...+ .++.++
T Consensus 321 ~~~L~~~~~~~-~~--~~~~~~~v~~~~~~-----------~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~ 386 (398)
T cd00613 321 AKRLKEVGGVL-PF--NGPFFHEFVLRLPP-----------LYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETE 386 (398)
T ss_pred HHHHHhcCCcc-cC--CCCeeEEEEEEcCC-----------cchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCC
Confidence 77776642111 00 00111222333311 00234678999999999988653 22333 467899
Q ss_pred CHHHHHHHHHHH
Q 017633 350 SSDDIQHTITAA 361 (368)
Q Consensus 350 ~~~~i~~~~~~l 361 (368)
+++|++++++.|
T Consensus 387 t~edid~~~~~L 398 (398)
T cd00613 387 TKEELDALLEAL 398 (398)
T ss_pred CHHHHHHHHHhC
Confidence 999999998864
No 228
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.90 E-value=1.5e-21 Score=179.03 Aligned_cols=322 Identities=14% Similarity=0.135 Sum_probs=204.3
Q ss_pred ccCCCcHHHHHHHHHHHHcCC-CCCC--CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 6 ILFPSYLQVLAALGETMKKGT-SFGA--PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~-~~~~--~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.++.++..+.+++.+++.... .+.. ..+...++++.+++.++ + .+.++++++|+++++.++... ..++|+|++
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~--~~~Gd~Vlv 89 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT--LSPGDKVVS 89 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc--CCCCCEEEE
Confidence 455566555555555554421 2211 23567788888888887 3 357899999999999988655 357889999
Q ss_pred EcCCCCCCchhh-hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccC
Q 017633 81 FEGCYHGHADPF-LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 158 (368)
.+.++++..... +...|..+.....+..... |++++++++++++ ++++++++.++.+.+|.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~--------------~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 90 FRIGQFSLLWIDQMQRLNFDVDVVESPWGQGA--------------DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred eCCCchhHHHHHHHHHcCCceEEEECCCCCCC--------------CHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 987776654322 2222333322221111111 7999999998531 36788888877777899888
Q ss_pred CHHHHHHHHHH--HHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC-
Q 017633 159 KPDFLNAIRRI--TKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP- 234 (368)
Q Consensus 159 ~~~~l~~i~~l--~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~- 234 (368)
+++|.++ |+++|+++|+|++|+ .|. ....+.++.+.-+.+.+|+++++.++|++++++++++.+.....
T Consensus 156 ----~~~i~~l~~~~~~g~~~vvD~v~s---~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~ 228 (401)
T PLN02409 156 ----LAGVRKLLDCAQHPALLLVDGVSS---IGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSP 228 (401)
T ss_pred ----HHHHHHHHhhhccCcEEEEEcccc---cCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCC
Confidence 8899999 999999999999996 222 23334455533344668999876789999999988877653211
Q ss_pred -ccc----------cc---cCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEe---e-
Q 017633 235 -MYQ----------AG---TLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGG---Y- 293 (368)
Q Consensus 235 -~~~----------~~---t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~- 293 (368)
.+. .+ .++++...+.++.++++.+.+.+ ..++.+++.+++++.|++ .++..... .
T Consensus 229 ~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~----~g~~~~~~~~~~~ 304 (401)
T PLN02409 229 RVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEA----WGLKLCTKKPEWR 304 (401)
T ss_pred CeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCChhhc
Confidence 100 11 33667777888888998875433 344555555555555544 33221111 1
Q ss_pred ccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCCC----cccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFE----AGFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~----~~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...+.++.+ |+..+..++.+.|+ ++||.+..+... .+|+ ...++++|+..++++|++++.
T Consensus 305 s~~v~~~~~-------------p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~ 371 (401)
T PLN02409 305 SDTVTAVVV-------------PEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLK 371 (401)
T ss_pred ccceEEEeC-------------CCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHH
Confidence 122334433 22333467877776 559999987432 2443 456799999999999999886
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 372 ~ 372 (401)
T PLN02409 372 D 372 (401)
T ss_pred H
Confidence 5
No 229
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=5.9e-21 Score=174.36 Aligned_cols=315 Identities=16% Similarity=0.145 Sum_probs=198.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC---CC------CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHh-
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF- 72 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~---~~------~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~- 72 (368)
+..|..++.+++++.+.+...... +. ..+...++++.++++++ . .+++++++|+++++..++..+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 345667788999998887553211 11 12445678899999987 4 679999999999999999766321
Q ss_pred cCCceEEEEcCCCCCCchhhhh---hcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 73 TGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
.+++.|++.+..|.+....... ..|..+....... .+.. |++++++.+. ++++++++..+
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~l~---~~~~~v~~~~~ 148 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQL-------------DLEALEKLLT---ERTKLVAVTHV 148 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCc-------------CHHHHHHHhc---CCceEEEEeCc
Confidence 1567888877666654322111 2233332222211 1111 7999999987 36778877777
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhh--hhccCCccceeeeehHHHH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~ 226 (368)
++++|.+.+ +++|.++|++||++|++|++|+. +.. +... ...+|++++| |++++ .++|+++++++++
T Consensus 149 ~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~---~~~~~~~~--~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~ 218 (373)
T cd06453 149 SNVLGTINP----VKEIGEIAHEAGVPVLVDGAQSA---GHMPVDVQ--DLGCDFLAFSGHKMLGP-TGIGVLYGKEELL 218 (373)
T ss_pred ccccCCcCC----HHHHHHHHHHcCCEEEEEhhhhc---Cceeeecc--ccCCCEEEeccccccCC-CCcEEEEEchHHh
Confidence 777888888 99999999999999999999962 111 1122 2345777666 99986 7799999998888
Q ss_pred HHhcCCCC-cc-----------------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 017633 227 EMVAPAGP-MY-----------------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHA 288 (368)
Q Consensus 227 ~~~~~~~~-~~-----------------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 288 (368)
+.+..... .. .....+.+..+..+..++++.+.+.++ +.+.++...+++.+.+.+.+.+..
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~-~~~~~~~~~~~~~l~~~l~~~~~~ 297 (373)
T cd06453 219 EEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGM-EAIAAHEHELTAYALERLSEIPGV 297 (373)
T ss_pred hcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHhcCCCe
Confidence 77663210 00 001124455666677777887765544 344444444555554444434311
Q ss_pred eEE---eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------------Ccccc--ccCCCH
Q 017633 289 ICG---GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFT--SLAHSS 351 (368)
Q Consensus 289 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------------~~~~~--~~~~~~ 351 (368)
... ...++++++.+. ..+..++.+.|.++||.+.++.. ..+|+ ...+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~ 363 (373)
T cd06453 298 RVYGDAEDRAGVVSFNLE--------------GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTE 363 (373)
T ss_pred EEeCCccccCCeEEEEEC--------------CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCH
Confidence 111 122445555541 12346889999999999976542 23444 455799
Q ss_pred HHHHHHHHHH
Q 017633 352 DDIQHTITAA 361 (368)
Q Consensus 352 ~~i~~~~~~l 361 (368)
+|++++++.|
T Consensus 364 ~di~~~~~~l 373 (373)
T cd06453 364 EEIDALVEAL 373 (373)
T ss_pred HHHHHHHhhC
Confidence 9999998864
No 230
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=1.1e-20 Score=174.37 Aligned_cols=321 Identities=17% Similarity=0.158 Sum_probs=198.6
Q ss_pred cCCCcHHHHHHHHHHHHcCCC--C-CC------CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHH--Hhc
Q 017633 7 LFPSYLQVLAALGETMKKGTS--F-GA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR--AFT 73 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~--~-~~------~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~--~~~ 73 (368)
.|..++.+.+++.+.+..... . +. ..+..+++++.++++++ + .+++++++|+++++..++..+. ...
T Consensus 27 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~ 106 (403)
T TIGR01979 27 TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLK 106 (403)
T ss_pred ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCC
Confidence 444667899999887764211 1 11 11345688899999998 4 5799999999999998886542 134
Q ss_pred CCceEEEEcCCCCCCchhhh---hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 74 GRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
+++.|++.+..++....... ...|..+...+.. ..+.. |++++++.++ ++++++++..++
T Consensus 107 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~-~~~~~-------------~~~~l~~~i~---~~~~lv~~~~~~ 169 (403)
T TIGR01979 107 AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD-DDGTL-------------DLDDLEKLLT---EKTKLVAITHVS 169 (403)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-CCCCC-------------CHHHHHHHhc---cCCeEEEEEccc
Confidence 57788887776665433222 2223332222111 11111 7899999887 467888887777
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHh
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~ 229 (368)
+++|...+ +++|.++|++||+++|+|++|+. |. ......++.+.-+.+++|.++ +.++|++++++++++.+
T Consensus 170 ~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~---g~~~~~~~~~~~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~ 241 (403)
T TIGR01979 170 NVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAV---PHMPVDVQALDCDFYVFSGHKMYG-PTGIGVLYGKEELLEQM 241 (403)
T ss_pred ccccccCC----HHHHHHHHHHcCCEEEEEchhhc---CccccCccccCCCEEEEecccccC-CCCceEEEEchHHHhcC
Confidence 78898888 99999999999999999999952 21 122233333222356789775 33589998988877765
Q ss_pred cCCCC---c---------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 017633 230 APAGP---M---------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 291 (368)
Q Consensus 230 ~~~~~---~---------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 291 (368)
..... . .....-+.+..+++++.++++.+.+.++ +.+.++...+++.+.+.+...+.....
T Consensus 242 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~-~~~~~~~~~l~~~l~~~l~~~~g~~~~ 320 (403)
T TIGR01979 242 PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGL-ENIEAHEHELTAYALERLGEIPGLRIY 320 (403)
T ss_pred CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 42100 0 0001114566677777788877754332 333444444444444443333211111
Q ss_pred e-----eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC------------CCcccc--ccCCCHH
Q 017633 292 G-----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFT--SLAHSSD 352 (368)
Q Consensus 292 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------~~~~~~--~~~~~~~ 352 (368)
. ..++++.+.+.. .+..++.+.|.++||.++.+. ...+|+ ...++++
T Consensus 321 ~~~~~~~~~~~v~~~~~~--------------~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~ 386 (403)
T TIGR01979 321 GPRDAEDRGGIISFNVEG--------------VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEE 386 (403)
T ss_pred CCCCccccCceEEEEeCC--------------cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHH
Confidence 1 124555555421 123578889999999998653 123444 5567999
Q ss_pred HHHHHHHHHHHHHhh
Q 017633 353 DIQHTITAAEKVLRQ 367 (368)
Q Consensus 353 ~i~~~~~~l~~~l~~ 367 (368)
|++++++.|+++++.
T Consensus 387 di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 387 DIDALVEALKKVRKF 401 (403)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998765
No 231
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=1.2e-20 Score=173.86 Aligned_cols=320 Identities=14% Similarity=0.137 Sum_probs=199.4
Q ss_pred CCCcHHHHHHHHHHHHcCCC---CCCC------ChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHH--HhcC
Q 017633 8 FPSYLQVLAALGETMKKGTS---FGAP------CLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLAR--AFTG 74 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~---~~~~------~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~--~~~~ 74 (368)
+..++.+++++.+.+..... .+.. .+..+++++.++++++ +.+++++++|+|+++..++.... ...+
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~ 112 (406)
T PRK09295 33 AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRA 112 (406)
T ss_pred ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCC
Confidence 34667899999888864211 1111 2446688899999987 46899999999999998886431 2346
Q ss_pred CceEEEEcCCCCCCchhhhhh---cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+++|++.+..|+......... .|..+...+... .+.. |+++++++++ ++++++++..+++
T Consensus 113 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~-------------d~~~l~~~i~---~~t~lv~l~~~~n 175 (406)
T PRK09295 113 GDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP-DGTL-------------QLETLPALFD---ERTRLLAITHVSN 175 (406)
T ss_pred cCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCCC-------------CHHHHHHhcC---CCcEEEEEecchh
Confidence 788998887777654332222 233222211111 1111 7899999886 4678888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
++|.+.+ +++|.++|+++|+++++|++|+... .......++.+.-+.+++|.++ +.++|++++++++.+.+..
T Consensus 176 ~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~ 248 (406)
T PRK09295 176 VLGTENP----LAEMIALAHQHGAKVLVDGAQAVMH--HPVDVQALDCDFYVFSGHKLYG-PTGIGILYVKEALLQEMPP 248 (406)
T ss_pred cccccCC----HHHHHHHHHHcCCEEEEEcccccCc--cccCchhcCCCEEEeehhhccC-CCCcEEEEEchHhHhhCCC
Confidence 8899998 9999999999999999999995211 1222333333222345679665 3358999999888766542
Q ss_pred C---CCc----------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEE
Q 017633 232 A---GPM----------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICG 291 (368)
Q Consensus 232 ~---~~~----------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~ 291 (368)
. +.. ...-+-+.+..+..++.++++.+.+.++ +.+.++.+.+.+.+.+.+.+.+ .....
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~-~~i~~~~~~l~~~l~~~l~~~~~~~~~~ 327 (406)
T PRK09295 249 WEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGL-NNIAEYEQNLMHYALSQLESVPDLTLYG 327 (406)
T ss_pred cccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 1 000 0011225677788888899988865343 3334444444444444333332 21111
Q ss_pred e-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC------------ccc--cccCCCHHHHHH
Q 017633 292 G-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE------------AGF--TSLAHSSDDIQH 356 (368)
Q Consensus 292 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~------------~~~--~~~~~~~~~i~~ 356 (368)
+ ...+++.+.+. .....++.+.|.++||.++.+..+ .+| +..+++++|+++
T Consensus 328 ~~~~~~iv~~~~~--------------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~ 393 (406)
T PRK09295 328 PQNRLGVIAFNLG--------------KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDR 393 (406)
T ss_pred CCCCceEEEEEEC--------------CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHH
Confidence 1 12334444431 112356788888999999875321 234 467789999999
Q ss_pred HHHHHHHHHh
Q 017633 357 TITAAEKVLR 366 (368)
Q Consensus 357 ~~~~l~~~l~ 366 (368)
+++.|+++..
T Consensus 394 l~~~l~~i~~ 403 (406)
T PRK09295 394 LVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 232
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=4.8e-21 Score=175.32 Aligned_cols=321 Identities=16% Similarity=0.078 Sum_probs=192.4
Q ss_pred ccCCCcHHHHHHHHHHHHcCC-CCCC-------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh--cC
Q 017633 6 ILFPSYLQVLAALGETMKKGT-SFGA-------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TG 74 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~-~~~~-------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--~~ 74 (368)
..+..++++++++.+++.... .... ..+..+++++.++++++ +.+++++++|+++++..++..+... .+
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~ 87 (381)
T PRK02948 8 ATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQN 87 (381)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCC
Confidence 345577899999988886521 1111 12456788899999997 6789999999999999988665321 24
Q ss_pred CceEEEEcCCCCCCchhh--hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 75 RERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
++.|++.+..++...... +...|.++...+... .+. .|++++++.++ +++++++++..+++
T Consensus 88 g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~-------------~d~~~l~~~l~---~~~~lv~~~~~~n~ 150 (381)
T PRK02948 88 KKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK-SGL-------------IRLVDLERAIT---PDTVLASIQHANSE 150 (381)
T ss_pred CCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC-CCC-------------CCHHHHHHhcC---CCCEEEEEECCcCC
Confidence 556665443333322222 222233222211111 111 17999998886 35778888888888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHH-HHHhc
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI-MEMVA 230 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~-~~~~~ 230 (368)
+|.+.+ +++|.++|+++|+++++|++|+ + |. ......++.+.-+.+++|.+++ ..+|++++++++ +..+.
T Consensus 151 tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~--g~~~~~~~~~~~d~~~~s~~K~~gp-~G~G~l~~~~~~~~~~~~ 222 (381)
T PRK02948 151 IGTIQP----IAEIGALLKKYNVLFHSDCVQT-F--GKLPIDVFEMGIDSLSVSAHKIYGP-KGVGAVYINPQVRWKPVF 222 (381)
T ss_pred cEeehh----HHHHHHHHHHcCCEEEEEChhh-c--cccccCcccCCCCEEEecHHhcCCC-CcEEEEEEcCCCCCCCcc
Confidence 999988 9999999999999999998874 2 21 2223344443334578998762 237888777654 11111
Q ss_pred CCC-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee-c----cceEEEEeec
Q 017633 231 PAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-I----SGMFGFFFTE 304 (368)
Q Consensus 231 ~~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~~~ 304 (368)
... .......++.|.++++++.++++.+.+ ..+...++...+++.+.+.+.+.+......+ . ..++.+.+
T Consensus 223 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~-- 298 (381)
T PRK02948 223 PGTTHEKGFRPGTVNVPGIAAFLTAAENILK--NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTI-- 298 (381)
T ss_pred cCCCCCCCcCCCCccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEe--
Confidence 000 000112346788888888888876532 2333334444444444443333333212111 1 11222222
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------Ccccc--ccCCCHHHHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFT--SLAHSSDDIQHTIT 359 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~~--~~~~~~~~i~~~~~ 359 (368)
......++...|.++||.++.+.. ..+|+ ...++++|++++++
T Consensus 299 ------------~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~ 366 (381)
T PRK02948 299 ------------KGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIH 366 (381)
T ss_pred ------------CCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHH
Confidence 111246677788889999986532 23443 45679999999999
Q ss_pred HHHHHHhh
Q 017633 360 AAEKVLRQ 367 (368)
Q Consensus 360 ~l~~~l~~ 367 (368)
.|++++++
T Consensus 367 ~l~~~~~~ 374 (381)
T PRK02948 367 ALETIGNQ 374 (381)
T ss_pred HHHHHHHH
Confidence 99988754
No 233
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.89 E-value=5.1e-21 Score=166.79 Aligned_cols=317 Identities=18% Similarity=0.178 Sum_probs=201.7
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCC----------ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHH-Hhc--C
Q 017633 9 PSYLQVLAALGETMKKGTSFGAP----------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR-AFT--G 74 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~----------~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~-~~~--~ 74 (368)
.-+|+++++|..++... ||-| ....++.++.+++..+ +++.++||+||||+++++|+-+. .+. +
T Consensus 12 p~~~~v~~~m~~~~~~~--fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~ 89 (386)
T COG1104 12 PVDPEVLEAMLPYLTEV--FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQ 89 (386)
T ss_pred CCCHHHHHHHHHHHHhh--cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhccc
Confidence 36789999999988773 2222 2456778888999998 67999999999999999996532 221 2
Q ss_pred CceEEEEcCCCCCCchhhhhhc-CCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKA-GSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
+.+-|+....-|....-.+... ..++.+.+++. ..+.. |+++|+++++ +++.+|.+...||.
T Consensus 90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v-------------~~e~L~~al~---~~T~LVSim~aNnE 153 (386)
T COG1104 90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLV-------------DLEQLEEALR---PDTILVSIMHANNE 153 (386)
T ss_pred CCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeE-------------cHHHHHHhcC---CCceEEEEEecccC
Confidence 3444555556666555444433 22222222211 23333 8999999999 57999999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHH-HHHhc
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDI-MEMVA 230 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~-~~~~~ 230 (368)
.|.+.| +++|.++|+++++++++|.+|+ .|+. ..+......|+.|||-..-+| =++|+++.++.+ .+.+.
T Consensus 154 ~G~IQp----I~ei~~i~k~~~i~fHvDAvQa---~Gki-pi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i 225 (386)
T COG1104 154 TGTIQP----IAEIGEICKERGILFHVDAVQA---VGKI-PIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLI 225 (386)
T ss_pred eeeccc----HHHHHHHHHHcCCeEEEehhhh---cCce-eccccccCcceEEeehhhccCCCceEEEEECCCCccCcee
Confidence 999999 9999999999999999999996 4543 222333346999999444333 478988876644 23232
Q ss_pred CC-C--CccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEeeccceEEEEeec
Q 017633 231 PA-G--PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTE 304 (368)
Q Consensus 231 ~~-~--~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~ 304 (368)
.. + +....+| .|..+.++...+++...+ +....++...++++.+.|.+.....-+. .......+.+.+.+
T Consensus 226 ~GGgQE~g~RsGT--env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f-- 301 (386)
T COG1104 226 HGGGQERGLRSGT--ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF-- 301 (386)
T ss_pred ccCcCCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe--
Confidence 21 1 1233343 466666666666665432 2334455555555555555431111000 01112223333333
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-----------------------cc--cccCCCHHHHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-----------------------GF--TSLAHSSDDIQHTIT 359 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-----------------------~~--~~~~~~~~~i~~~~~ 359 (368)
....++.+.-.|..+||.++.|+.+. +| +...++++|++++++
T Consensus 302 ------------~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~ 369 (386)
T COG1104 302 ------------PGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAE 369 (386)
T ss_pred ------------CCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHH
Confidence 23345777888888899999874321 13 345679999999999
Q ss_pred HHHHHHhh
Q 017633 360 AAEKVLRQ 367 (368)
Q Consensus 360 ~l~~~l~~ 367 (368)
.+++++++
T Consensus 370 ~l~~~i~~ 377 (386)
T COG1104 370 ALKEIIKR 377 (386)
T ss_pred HHHHHHHH
Confidence 99999865
No 234
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.89 E-value=1.5e-20 Score=170.70 Aligned_cols=327 Identities=12% Similarity=0.056 Sum_probs=192.2
Q ss_pred cCCCcHHHHHHHHHHHHcCCC----CC----CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 7 LFPSYLQVLAALGETMKKGTS----FG----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~----~~----~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
=|+-.|.+++++.++...... .+ ..++...++++.++++++- +++++++|+++++..++... ..+++.|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~i~~~~g~t~al~~~l~~~--~~~gd~V 86 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM-DEARVTPGAREGKFAVMHSL--CEKGDWV 86 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC-ceEEEeCCHHHHHHHHHHHh--cCCCCEE
Confidence 356677888888887743211 11 1134678999999999865 78999999999999998765 3467788
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCC-CCCCCCCCcccccCCCCHHHHHHHHHcCC----CCeEEEEEcccCCCC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVVGNS 153 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~~~~~~----~~~~~~~~~~~~~~~ 153 (368)
++...+++... ..+...|..+......... ... |+++++++++... ++++++++...++++
T Consensus 87 l~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~t 152 (361)
T cd06452 87 VVDGLAHYTSY-VAAERAGLNVREVPNTGHPEYHI-------------TPEGYAEVIEEVKDEFGKPPALALLTHVDGNY 152 (361)
T ss_pred EEcCCcchHHH-HHHHhcCCEEEEEecCCCCCccc-------------CHHHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence 88766655543 2333334433322221111 011 7999999887421 256777776666667
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~ 232 (368)
|...+ +++|.++|+++|+++|+|++|. .|. .+....++.+..+.|++|+++++.|+|++++++++++.+...
T Consensus 153 G~~~~----~~~i~~~~~~~~~~vivD~a~~---~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~ 225 (361)
T cd06452 153 GNLHD----AKKIAKVCHEYGVPLLLNGAYT---VGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRT 225 (361)
T ss_pred eeecc----HHHHHHHHHHcCCeEEEECCcc---cCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcc
Confidence 87777 9999999999999999999996 221 123334454445668999998767999999999888887643
Q ss_pred CCcccc---c--cCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceE--EeeccceEEEEeec
Q 017633 233 GPMYQA---G--TLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFFTE 304 (368)
Q Consensus 233 ~~~~~~---~--t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~ 304 (368)
...+.. . ..+.++..+.++.++++.+.+ -....+..++.+++++.|+++ .++... .....+++.+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l---~g~~v~~~~~~~~n~~~~~~~- 301 (361)
T cd06452 226 SQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI---EGIKQLGEKPKNHDLMFFETP- 301 (361)
T ss_pred ccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEECCCCCCCceEEEEcC-
Confidence 321100 0 001122234444455543321 011122223334555555442 022111 1123334444331
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-cccc-ccCCCHHHHHHHHHHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFT-SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-~~~~-~~~~~~~~i~~~~~~l~~~l 365 (368)
. +.+........+.++.+.|+++||.+...+.. .+|+ ....++++++.++++|+++.
T Consensus 302 ~----~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 S----FDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred C----cchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 0 00000000112346999999999996443322 2343 23469999999999999764
No 235
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.89 E-value=2.1e-21 Score=166.22 Aligned_cols=304 Identities=14% Similarity=0.106 Sum_probs=187.0
Q ss_pred hhHHHHHHHHHhhCC-----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 33 LLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
...+++++.+...-+ +++++++++|+|.|++..+.++. .+++..+++.|.|.|...-..--+|..+....+..
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa--dpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~S 202 (471)
T KOG0256|consen 125 SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA--DPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSS 202 (471)
T ss_pred HHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc--CCCceeeecCCCCCcccccceeccCceEEEEEeec
Confidence 344444444444332 47899999999999999886663 47888899888888763332222333333333333
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
..++.. +.+++|+++.+ ...+++.+++..+.|+-|.+.++++ +..+.+++.++++.||+||+|+
T Consensus 203 s~~f~i------------tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~-L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 203 SNGFQI------------TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEE-LISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred CCCccc------------cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHH-HHHHHHHHhhcceEEEeehhhc
Confidence 333221 68888888875 2245665555444444566565555 9999999999999999999997
Q ss_pred ch-hcc-cCcccccc----CCCcc----hhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHH
Q 017633 185 GF-RLA-YGGAQEYF----GVTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 252 (368)
Q Consensus 185 ~~-~~g-~~~~~~~~----~~~~d----i~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 252 (368)
+- +.. ++.++... ...+| +.++||-|| +|+|+|.+.. ++.+........ +-...++..|..+.
T Consensus 270 ~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms-----sf~~vSs~tQ~~la 344 (471)
T KOG0256|consen 270 GSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS-----SFGLVSSQTQYLLA 344 (471)
T ss_pred ccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh-----hccCCcHHHHHHHH
Confidence 64 222 22121111 11344 458999999 9999999966 677777766321 22244566666654
Q ss_pred HHHHHHccCCH-HHHHHHHHHHHHHHH---HHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHH
Q 017633 253 HTLKRLKEPGT-YEYLNKITGELTQGI---IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 328 (368)
Q Consensus 253 ~~l~~~~~~~~-~~~~~~~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (368)
..+. ++.+ ...++++.++++.+- .+-+...+.+..-.+.|.+.|++++.-..+. .-..-.++.+.+
T Consensus 345 ~LLS---D~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~-------tfe~El~Lw~~i 414 (471)
T KOG0256|consen 345 SLLS---DEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSL-------TFEGELELWERI 414 (471)
T ss_pred HHhc---hHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcC-------ChHHHHHHHHHH
Confidence 4443 3332 122333333333332 2233445777778888999999998643211 111124677888
Q ss_pred HHc-CeeecCCCCC------ccccccCC-CHHHHHHHHHHHHHHHh
Q 017633 329 LEE-GVYFAPSQFE------AGFTSLAH-SSDDIQHTITAAEKVLR 366 (368)
Q Consensus 329 ~~~-Gi~~~~~~~~------~~~~~~~~-~~~~i~~~~~~l~~~l~ 366 (368)
+++ ++.++||... ++|+.++. .++.++-++++|+..+.
T Consensus 415 ~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 415 LDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 877 9999998543 34555555 55556669999998764
No 236
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.8e-21 Score=159.97 Aligned_cols=319 Identities=15% Similarity=0.101 Sum_probs=207.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc-CCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE-GCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~-~~~~~~ 88 (368)
...+++++|.++......|+ .++...+|.++.++.++ .+..+|++|||.++.++++..+.. ++..||+-+ ...|-+
T Consensus 34 PTdeMr~am~eA~vgDdVyG-eD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~-rg~eii~gd~~HI~~~ 110 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGDDVYG-EDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQ-RGSEIIVGDRAHIHRY 110 (384)
T ss_pred ChHHHHHHHhhcccCccccc-CCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcC-CCceEEeccchheeeh
Confidence 34578888888765545555 45667899999999985 466777778999999999877654 444666633 222222
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc-----CCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN-----NKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
..+.+...+...+..-.+..++.. |++++|+++.. |.+.++.+.+|...++.|....|.||+
T Consensus 111 E~gg~s~l~gv~~~tv~~e~dgtm-------------~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~ 177 (384)
T KOG1368|consen 111 EQGGISQLAGVHVRTVKNENDGTM-------------DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEEL 177 (384)
T ss_pred hccChhhhccceeEeeeeCCCCee-------------eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHH
Confidence 222222211111110012223322 79999999984 346789999999999888788889999
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcch--hhhhhhccCCccceee-eehHHHHHHhcCCCCccccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v-~~~~~~~~~~~~~~~~~~~~ 239 (368)
+++.+||++||+.|++|-+-..= ..........+....|- +++||++++ |+|.+ ++++++++..++.+ ..+++
T Consensus 178 ~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSViVG~k~FI~kA~~~R-KalGG 254 (384)
T KOG1368|consen 178 DRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSVIVGSKDFIDKARHFR-KALGG 254 (384)
T ss_pred HHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccEEEccHHHHHHHHHHH-HHhcC
Confidence 99999999999999999555210 01111122222222233 468999986 78877 66888877655322 12345
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCcccchhccccc
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
.+..+-+.+++++.+++ +....++.-++++..+.+.++... .....++ ...+++.+.+... .
T Consensus 255 GmRQsGvLaaaaLval~--~~~~~L~~dHk~A~~lAe~~~~~~---~i~v~v~a~etNiv~~~l~q~------------~ 317 (384)
T KOG1368|consen 255 GMRQSGVLAAAALVALD--ENVPLLRADHKRAKELAEYINTPE---EIRVEVPAVETNIVNMVLCQA------------R 317 (384)
T ss_pred chhHHHHHHHHHHHHhh--cchHHHHHHHHHHHHHHHHhcccc---ceeeecchhhcceeeeecccc------------c
Confidence 55556677777776665 223356777778888877777421 1233333 4455666665432 2
Q ss_pred HHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHH
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~ 364 (368)
.+.+++++.+.++||.+.++.....| +....++++++.+...+.+.
T Consensus 318 ~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 318 LTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred CCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 34589999999999999988655555 46778999999999999443
No 237
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.89 E-value=1.3e-20 Score=172.24 Aligned_cols=319 Identities=17% Similarity=0.082 Sum_probs=192.9
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCC-CC-------ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH-hcCCc
Q 017633 7 LFPSYLQVLAALGETMKKGTSFG-AP-------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-FTGRE 76 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~~-~~-------~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~-~~~~~ 76 (368)
.+..++++++++.+++.....+. .. .+...++++.++++++ +.+++++++|||+++..+++.+.. .++++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~ 87 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKR 87 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence 34567899999998876421111 11 2346678899999998 678999999999999999976532 23455
Q ss_pred eEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 77 RIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
.|++.+..|+......... .|..+...+... .+.. |++++++.++ ++++++++...++++|
T Consensus 88 ~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g~~-------------~~~~l~~~i~---~~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 88 HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE-EGRL-------------DLEELRAAIT---DDTALVSVMWANNETG 150 (379)
T ss_pred eEEEcccccHHHHHHHHHHHHcCCEEEEEccCC-CCcC-------------CHHHHHHhcC---CCcEEEEEEcccCCee
Confidence 6666565555432222222 233332221111 1111 7999999987 4677887777777889
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHH-HHhcC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIM-EMVAP 231 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~-~~~~~ 231 (368)
.+.+ +++|.++|++||+++++|++|+ .|.. ..+.....+|++++| | +.|+.++|+++++++.. .....
T Consensus 151 ~~~~----~~~I~~l~~~~g~~vivD~~~~---~g~~-~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~~p~~~ 221 (379)
T TIGR03402 151 TIFP----IEEIGEIAKERGALFHTDAVQA---VGKI-PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRFRPLLR 221 (379)
T ss_pred eccc----HHHHHHHHHHcCCEEEEECccc---cccc-ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCCCCccc
Confidence 9888 8999999999999999999996 2221 122223456777766 9 55445688887765431 10000
Q ss_pred CCC-ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEEee---c-cceEEEEeecC
Q 017633 232 AGP-MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGY---I-SGMFGFFFTEG 305 (368)
Q Consensus 232 ~~~-~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~---~-~~~~~~~~~~~ 305 (368)
.+. .......+.+..+..+..++++.+.+ +.+...++.+.+++.+.+.+.+ .+....... . ...+.+.+.
T Consensus 222 g~~~~~~~~~gt~~~~~~~~l~~al~~~~~--~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 297 (379)
T TIGR03402 222 GGHQERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-- 297 (379)
T ss_pred CCccCCCcCCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec--
Confidence 000 00011224566777777778877643 3444455555555555554432 321111110 1 122222221
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------Cccc--cccCCCHHHHHHHHHH
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGF--TSLAHSSDDIQHTITA 360 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~--~~~~~~~~~i~~~~~~ 360 (368)
.....++...|.++||.++.+.. ..+| +...++++|++++++.
T Consensus 298 ------------~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~ 365 (379)
T TIGR03402 298 ------------YIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEV 365 (379)
T ss_pred ------------CCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHH
Confidence 11236788888889999987531 1244 4677899999999999
Q ss_pred HHHHHhh
Q 017633 361 AEKVLRQ 367 (368)
Q Consensus 361 l~~~l~~ 367 (368)
|++++++
T Consensus 366 l~~~~~~ 372 (379)
T TIGR03402 366 LPPIIAR 372 (379)
T ss_pred HHHHHHH
Confidence 9998754
No 238
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.88 E-value=5.2e-20 Score=170.61 Aligned_cols=318 Identities=17% Similarity=0.153 Sum_probs=198.5
Q ss_pred CCCcHHHHHHHHHHHHcCCCC--C---C----CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHH--HhcC
Q 017633 8 FPSYLQVLAALGETMKKGTSF--G---A----PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR--AFTG 74 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~--~---~----~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~--~~~~ 74 (368)
|..++.+++++.+.+...... . + ..+..+++++.++++++ . .++|++++|+|+++..+++... ...+
T Consensus 42 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~ 121 (424)
T PLN02855 42 SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKP 121 (424)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCC
Confidence 446678999998877652111 1 1 11235688899999997 3 4799999999999999886421 2346
Q ss_pred CceEEEEcCCCCCCchhhhh---hcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
++.|++.+..|++....... ..|..+..........+ |++++++.++ ++++++++..+++
T Consensus 122 gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~--------------~~~~l~~~i~---~~t~lv~i~~~~n 184 (424)
T PLN02855 122 GDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVL--------------DVEQLKELLS---EKTKLVATHHVSN 184 (424)
T ss_pred cCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCc--------------CHHHHHHHhc---cCceEEEEeCccc
Confidence 77888887767654333222 22333322211111111 7899999997 4688888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcch--hhhhhhccCCccceeeeehHHHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
++|.+.+ +++|.++|+++|+++++|++|. .|. ......++ +|+ .+++|.++ +.++|++++++++++.
T Consensus 185 ~tG~~~~----~~~I~~l~~~~g~~vivD~a~~---~g~~~~~~~~~~--~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~ 254 (424)
T PLN02855 185 VLGSILP----VEDIVHWAHAVGAKVLVDACQS---VPHMPVDVQTLG--ADFLVASSHKMCG-PTGIGFLWGKSDLLES 254 (424)
T ss_pred cccccCC----HHHHHHHHHHcCCEEEEEhhhh---cCCcCCCchhcC--CCEEEeecccccC-CCccEEEEEchhhhhc
Confidence 8999998 9999999999999999999995 221 12223333 455 47789554 3469999999888776
Q ss_pred hcCC--CCc---------------c-ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-Cce
Q 017633 229 VAPA--GPM---------------Y-QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAI 289 (368)
Q Consensus 229 ~~~~--~~~---------------~-~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~ 289 (368)
+... +.. . .....+.+..+.+++.++++.+.+.++ +.+.++...+++.+.+.+.+.+ ...
T Consensus 255 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~-~~i~~~~~~l~~~l~~~L~~~~g~~i 333 (424)
T PLN02855 255 MPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGM-DRIHEYEVELGTYLYEKLSSVPGVRI 333 (424)
T ss_pred CCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 6421 000 0 001113455666777788887754332 3444444444444444433332 111
Q ss_pred EE------eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC------------Cccc--cccC
Q 017633 290 CG------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF------------EAGF--TSLA 348 (368)
Q Consensus 290 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~------------~~~~--~~~~ 348 (368)
.. ...++++.+.+. .....++.+.|.++ ||.++.+.. ..+| +..+
T Consensus 334 ~~~~~~~~~~r~~~v~~~~~--------------~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~y 399 (424)
T PLN02855 334 YGPKPSEGVGRAALCAFNVE--------------GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFY 399 (424)
T ss_pred eCCCcccccCcccEEEEEEC--------------CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccC
Confidence 10 112345555542 12246788999887 999986531 2234 4677
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 017633 349 HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 349 ~~~~~i~~~~~~l~~~l~~ 367 (368)
++++|++++++.|++++..
T Consensus 400 nt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 400 NTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 8999999999999998754
No 239
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=9.1e-20 Score=160.28 Aligned_cols=319 Identities=18% Similarity=0.162 Sum_probs=213.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCC--CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGA--PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
-+|+|+++|.+..-. +.. ..+...++.+.+...++ . .+.++++.|||.+++.++..+ ..++|+|++...+.
T Consensus 16 v~~~V~~am~~~~~~---h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl--~~pgdkVLv~~nG~ 90 (383)
T COG0075 16 VPPRVLLAMARPMVG---HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL--VEPGDKVLVVVNGK 90 (383)
T ss_pred CCHHHHHHhcCCCCC---CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc--cCCCCeEEEEeCCh
Confidence 355677666554322 221 23567788888888887 3 478888899999999999655 35788999998888
Q ss_pred CCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 86 HGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
+|...+-+... |..+.....+....+ |+++++++++.+ +..+++.+.++-..+|...| ++
T Consensus 91 FG~R~~~ia~~~g~~v~~~~~~wg~~v--------------~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp----l~ 151 (383)
T COG0075 91 FGERFAEIAERYGAEVVVLEVEWGEAV--------------DPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP----LK 151 (383)
T ss_pred HHHHHHHHHHHhCCceEEEeCCCCCCC--------------CHHHHHHHHhcC-CCccEEEEEeccCcccccCc----HH
Confidence 88776555443 343333222222222 899999999965 45666667677777898898 99
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc--c------
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM--Y------ 236 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~--~------ 236 (368)
+|+++|++||.++|+|.+-+ ..|..+..+.|+++.-+..-.|++++..++|.+..+++.++.+...... +
T Consensus 152 ~I~~~~k~~g~l~iVDaVsS--~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~ 229 (383)
T COG0075 152 EIAKAAKEHGALLIVDAVSS--LGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKW 229 (383)
T ss_pred HHHHHHHHcCCEEEEEeccc--CCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHH
Confidence 99999999999999997765 2345677888998665566779999766789999999988888754321 1
Q ss_pred -------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE---eeccceEEEEeecCC
Q 017633 237 -------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG---GYISGMFGFFFTEGP 306 (368)
Q Consensus 237 -------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 306 (368)
....++++.....+..++++.+.+++ .+...++++.+.+.+++.....++.... ........+..
T Consensus 230 ~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EG-le~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~---- 304 (383)
T COG0075 230 LKYMEKKGSTPYTPPVNLIYALREALDLILEEG-LEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKV---- 304 (383)
T ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEEC----
Confidence 13455667778888889999888766 3444444444445554444444433222 11112223322
Q ss_pred CcccchhcccccHHHHHHHHHHHHc-CeeecCCCCC----cccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFE----AGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~----~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
|.+.+..+....++++ |+.+.++..+ .+|+ .-..+.+++..++.+|+.++.++
T Consensus 305 ---------P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 305 ---------PEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ---------CCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 3333333344456555 9999887433 2444 34679999999999999998653
No 240
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=4.4e-20 Score=157.53 Aligned_cols=320 Identities=21% Similarity=0.202 Sum_probs=198.2
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 9 PSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
...|+++++|.++-.....-|..++.-.++.+++++.++. ..++|++|||+|+.++|.... .++..||+-. .-|-.
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~-~a~~Fv~sGT~aN~lal~~~~--~~~~~vi~~~-~aHi~ 86 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK-EAALFVPSGTQANQLALAAHC--QPGESVICHE-TAHIY 86 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC-ceEEEecCccHHHHHHHHHhc--CCCCeEEEec-cccce
Confidence 3789999999886533333344678899999999999977 899999999999999997764 3555666643 34443
Q ss_pred ch--hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 89 AD--PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 89 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
.. .+....+........+...+.+ ++++++..++. +...+..++.+...+.+|.+++ .+++
T Consensus 87 ~~E~Ga~~~~~~~~~~~~~~g~~Gkl-------------t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~-l~el 152 (342)
T COG2008 87 TDECGAPEFFGGGQKLPIVPGADGKL-------------TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYP-LDEL 152 (342)
T ss_pred ecccCcHHHHcCCceeccCCCCCCCc-------------CHHHHHHhhcCCCcccCCCceEEEeeccCCCceecC-HHHH
Confidence 32 3333333322222233344444 89999998884 2234555555555556776555 4559
Q ss_pred HHHHHHHHHhCCEEEEehhhhc--h-hcccCccccccCCCcchhhhhhhccCCccceee-eehHHHHHHhcCCCCccccc
Q 017633 164 NAIRRITKENGALLIFDEVMTG--F-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~--~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v-~~~~~~~~~~~~~~~~~~~~ 239 (368)
++|.++|++||+.|++|-+-.. + ..+ .....|....|.++|+=+.++|+++|.+ ++++++++.++..+ ...++
T Consensus 153 ~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~r-K~~Gg 229 (342)
T COG2008 153 EAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWR-KRAGG 229 (342)
T ss_pred HHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHH-HHhcc
Confidence 9999999999999999955521 1 112 2333444445666655444456788887 66888877665321 12334
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH-hcCCceEEeeccceEEEEeecCCCcccchhccccc
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK-KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
.++-..+..+..+..++ +++..........+.++|.+.+. ..+.....+...+++.+.+... .
T Consensus 230 l~~k~r~laA~~~~~l~----~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~------------~ 293 (342)
T COG2008 230 LMRKARFLAAQGLYALE----DDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES------------A 293 (342)
T ss_pred cHhhhhHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH------------H
Confidence 44444455555555554 44333333333334444444443 3355444556677777766321 1
Q ss_pred HHHHHHHHHHHHcCeeecCCC-CCccccccCCCHHHHHHHHHHHHHHH
Q 017633 319 TKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~-~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+......++...|+.+.+.+ .-.+..+..+++++++++++.+++++
T Consensus 294 i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 233455566666778877765 22233478899999999999998865
No 241
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=1.5e-19 Score=166.64 Aligned_cols=312 Identities=15% Similarity=0.128 Sum_probs=177.6
Q ss_pred CcHHHHHHHHHHHHcC-------CCCCCCChhHHH----HHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKKG-------TSFGAPCLLENV----LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~----l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
-+|+|++++.+.+... ..++...+.... .++.++++++ +...++++ ||++|+..++... ..++|.
T Consensus 31 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-sgt~a~~~~l~~l--~~~Gd~ 107 (402)
T cd00378 31 TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-SGSQANLAVYFAL--LEPGDT 107 (402)
T ss_pred CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-CcHHHHHHHHHHh--cCCCCE
Confidence 4788999988765321 111112333333 3445667777 33444444 6899999988766 356789
Q ss_pred EEEEcCCCCCCchhh----hhhcCCCccccCCCCC--CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 78 IIKFEGCYHGHADPF----LVKAGSGVATLGLPDS--PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 78 vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
|++.++.|.++.... +...|..+....++.. .+.. |++++++.+.+. +++++++.+..
T Consensus 108 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i-------------d~~~l~~~i~~~--~~~~v~~~~~~- 171 (402)
T cd00378 108 IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLI-------------DYDALEKMALEF--KPKLIVAGASA- 171 (402)
T ss_pred EEEecCccCccccccccccccccceeEEEecCCcCcccCCc-------------CHHHHHHHHHhC--CCCEEEecCcc-
Confidence 999988886653321 1222221111111111 1111 899999998642 45666554332
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccC-ccccccCCCcchhhhhhhccCCccceeeeehH-HHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRR-DIME 227 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~-~~~~ 227 (368)
.|...+ +++|+++|++||+++|+|++| .++ ..|.. .... +.+.-+.++||++ +|+|+||+++++ ++++
T Consensus 172 -~~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l-~G~~gg~i~~~~~~~~~ 243 (402)
T cd00378 172 -YPRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL-RGPRGGLILTRKGELAK 243 (402)
T ss_pred -cCCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC-CCCCceEEEeccHHHHH
Confidence 234445 999999999999999999997 555 33321 1111 2222245889999 678999998876 7877
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceE-EeeccceEEEEee
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFT 303 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 303 (368)
.+.........+ +.......++..++..... +++.+++.++++++++.|.+ .++... .+..++++|+.+.
T Consensus 244 ~l~~~~~~~~~~--~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~v~v~~~ 317 (402)
T cd00378 244 KINSAVFPGLQG--GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE----RGFKVVSGGTDNHLVLVDLR 317 (402)
T ss_pred HHHHHhCccccC--CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh----CCCeEeecCCCCeEEEEeCC
Confidence 775321111111 1122333333334433322 23445566666666666655 343222 1234667777763
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC----------Cccccc------cCCCHHHHHHHHHHHHHHHh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFTS------LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----------~~~~~~------~~~~~~~i~~~~~~l~~~l~ 366 (368)
.. ......+.+.|.++||.+.+... ..+|+. ..++++|++++++.|++++.
T Consensus 318 ~~------------~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 318 PK------------GITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred cc------------CCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 21 11235667778888999975321 123332 13478999999999999874
No 242
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=1.9e-19 Score=164.47 Aligned_cols=312 Identities=16% Similarity=0.146 Sum_probs=187.7
Q ss_pred CcHHHHHHHHHHHHcCC---C-CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh----cCCceEEE
Q 017633 10 SYLQVLAALGETMKKGT---S-FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF----TGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~---~-~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~----~~~~~vi~ 80 (368)
..|.+++++.+++.... . +....+...++++.++++++ +.+.+++++||++++..++..+... .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 44566777777654421 1 11223556899999999998 5667888999999998888655431 23467887
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.+++++.. .......|.++....... .+. .|++++++.++.+ ..+++++.+ ++++|.+.+
T Consensus 112 ~~~~h~~~-~~~~~~~G~~~~~v~~~~-~~~-------------~d~~~l~~~l~~~--~~~vv~~~~-~~~tG~~~~-- 171 (373)
T TIGR03812 112 PESAHFSF-EKAAEMLGLELRYAPLDE-DYT-------------VDVKDVEDLIDDN--TIGIVGIAG-TTELGQIDD-- 171 (373)
T ss_pred CCcchHHH-HHHHHHcCCeEEEEeeCC-CCC-------------cCHHHHHHHHhhC--cEEEEEECC-CCCCCccCC--
Confidence 77655542 233333343332211111 110 1799999998742 334555554 456788777
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hc-c----cCccccccCCCcchhhh--hhhccCCccceeee-ehHHHHHHhcC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RL-A----YGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYG-GRRDIMEMVAP 231 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~-g----~~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~-~~~~~~~~~~~ 231 (368)
+++|.++|+++|+++|+|++|.++ .. . .....+..-...|.+++ .|...++.|+|+++ .++++++.+..
T Consensus 172 --~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~ 249 (373)
T TIGR03812 172 --IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSV 249 (373)
T ss_pred --HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcc
Confidence 999999999999999999999654 11 0 00011110012344443 38433667888664 57777776642
Q ss_pred CCCccccc-----cCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 232 AGPMYQAG-----TLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 232 ~~~~~~~~-----t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
..++.... ..+.+.....++.++++.+.+++ ..++..+++++++++|+++ +......+..+++.+.+
T Consensus 250 ~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~- 324 (373)
T TIGR03812 250 DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIVAFEV- 324 (373)
T ss_pred cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEEEEEe-
Confidence 22211111 11344566777778888765433 4566666666666666653 33222223334444432
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-CCcccc--ccCCCHHHHHHHHHHHHH
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFT--SLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~~~~--~~~~~~~~i~~~~~~l~~ 363 (368)
++ ..++.+.|.++||.++... ...+|+ +..++++|++++++.|++
T Consensus 325 ------------~~---~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 325 ------------DD---PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ------------CC---HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 11 3578999999999998763 334554 556899999999999976
No 243
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=2.4e-19 Score=161.92 Aligned_cols=314 Identities=13% Similarity=0.072 Sum_probs=186.2
Q ss_pred CceeccCC--CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc---
Q 017633 2 PQLIILFP--SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE--- 76 (368)
Q Consensus 2 ~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~--- 76 (368)
+...++|. .++++++++.++.++ +....+...+++++++++++ .+++++++|+|+|+..+++.+. .++|
T Consensus 15 g~~t~~g~s~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~a~~~g-~~~~~~~~g~t~al~~al~al~--~~Gd~~~ 88 (363)
T TIGR01437 15 GKMTILGVSTVSDEVADAQKRGAQN---YFEIKELVNKTGEYIANLLG-VEDAVIVSSASAGIAQSVAAVI--TRGNRYL 88 (363)
T ss_pred cEeecCCCCCCCHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHhhC-CCeEEEEcCHHHHHHHHHHHHh--cCCCcch
Confidence 34456676 588999999998765 33456778888999998885 3478999999999999997763 3444
Q ss_pred ------------eEEEEcCCCCCCc---hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCe
Q 017633 77 ------------RIIKFEGCYHGHA---DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 141 (368)
Q Consensus 77 ------------~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~ 141 (368)
.||+..+.|..+. ...+...|........ .+. .|+++++++++ +++
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~---~~~-------------~d~~~le~ai~---~~t 149 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY---ANE-------------CSAEQLEAAIT---EKT 149 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC---CCC-------------CCHHHHHHhcC---hhc
Confidence 7777665444321 2333333432221111 111 18999999998 456
Q ss_pred EEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCcccee
Q 017633 142 AAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGA 218 (368)
Q Consensus 142 ~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~ 218 (368)
++++ +++.++.+|...+ +++|+++|++||+++|+|++|..-. .....++ .|++ |.+|+++ |++.|+
T Consensus 150 ~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~~~~----~~~~~~g--~D~~~~S~~K~l~-gp~~G~ 218 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAEEDL----QKYYRLG--ADLVIYSGAKAIE-GPTSGL 218 (363)
T ss_pred eEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCCCch----HHHHHcC--CCEEEEeCCcccC-CCceEE
Confidence 6555 3443445676777 9999999999999999999996100 0111233 3554 5669885 567999
Q ss_pred eeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE--eec
Q 017633 219 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG--GYI 294 (368)
Q Consensus 219 v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~ 294 (368)
++.++++++.+...... ....+.......++..++++.+.+ .+..+...+++++++++|.++. ++.... ...
T Consensus 219 l~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~---g~~~~~~~~~~ 294 (363)
T TIGR01437 219 VLGKKKYIEWVKLQSKG-IGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLK---GVSASIVQDEA 294 (363)
T ss_pred EEEcHHHHHHHHhccCC-CcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCC---CeEEEEecCCC
Confidence 88888777765321100 001111122334444556655543 3344555556667777776641 211111 110
Q ss_pred cc---eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcC--eeecCC--CCCcccc-ccCCCHHHHHHHHHHHHHHH
Q 017633 295 SG---MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPS--QFEAGFT-SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 295 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--i~~~~~--~~~~~~~-~~~~~~~~i~~~~~~l~~~l 365 (368)
+. ...+.+... ....+..++.+.|.++| |..++. ....+++ ....+++|++.++++|++++
T Consensus 295 ~~~~~~~~v~~~~~----------~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 295 GRDIARAEIRFDES----------ELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred CCcCceEEEEEecc----------CCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 11 111222110 01234588999998877 777642 1222333 23467999999999998764
No 244
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=8.6e-20 Score=165.24 Aligned_cols=309 Identities=13% Similarity=0.056 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
++-.+++.+.+..+...+ ..+...++.+++++.++ .+++++++||++|+..++..+ ...++|.||+.+.+|.+....
T Consensus 11 ~~e~~a~~~~~~~~~~~~-~g~~~~~~e~~la~~~g-~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~~~~ 87 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSG-DGPFSRRCETWLENRTG-TKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTANA 87 (376)
T ss_pred HHHHHHHHHHHHcCCccC-CcHHHHHHHHHHHHHhC-CCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHHHHH
Confidence 456778888776643332 34567888888888874 468999999999999988654 235788999988888776444
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
... .|..++........... |+++++++++ +++++++ |++ .+|...+ +++|.++|+
T Consensus 88 ~~~-~G~~~v~vd~d~~~~~~-------------d~~~le~~i~---~~tk~Ii--p~~-~~G~~~d----~~~I~~la~ 143 (376)
T TIGR02379 88 FVL-RGAKIVFVDIRPDTMNI-------------DETLIESAIT---HRTKAIV--PVH-YAGVACD----MDTIMALAN 143 (376)
T ss_pred HHH-cCCEEEEEecCCCcCCC-------------CHHHHHHhcC---cCceEEE--EeC-CCCCccC----HHHHHHHHH
Confidence 433 34433322222111111 7899999887 3677765 333 3566666 999999999
Q ss_pred HhCCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccCCccceeeeeh-HHHHHHhcC---CCCc--------
Q 017633 172 ENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM-------- 235 (368)
Q Consensus 172 ~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~G~~iG~v~~~-~~~~~~~~~---~~~~-------- 235 (368)
+||+++|+|++|+.. ..+.....+..-|+.+|| |.+++|.+.|+++.+ +++.+.++. .+..
T Consensus 144 ~~~i~vIeDaa~~~g---~~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 220 (376)
T TIGR02379 144 KHQLFVIEDAAQGVM---STYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGE 220 (376)
T ss_pred HCCCEEEEECccccC---CccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccC
Confidence 999999999999632 111112234334677777 999877788998664 666665542 1100
Q ss_pred -------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH----hcC-CceEEeeccceEEEEee
Q 017633 236 -------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAICGGYISGMFGFFFT 303 (368)
Q Consensus 236 -------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~-~~~~~~~~~~~~~~~~~ 303 (368)
..+..+..+.+.++.+++.++.+ ++..++.+++.+++.+.|.+... ..+ .+........++++.+.
T Consensus 221 ~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (376)
T TIGR02379 221 VDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLK 298 (376)
T ss_pred CCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEEC
Confidence 02344456667777777777766 44566677777777777765421 111 01011111122233331
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc--------------------------ccc--ccCCCHHHHH
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--------------------------GFT--SLAHSSDDIQ 355 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--------------------------~~~--~~~~~~~~i~ 355 (368)
...+..++.+.|.++||..+....+. +++ ...++++|++
T Consensus 299 -------------~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~ 365 (376)
T TIGR02379 299 -------------DEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA 365 (376)
T ss_pred -------------CcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence 11235789999999999877432110 122 2457999999
Q ss_pred HHHHHHHHHH
Q 017633 356 HTITAAEKVL 365 (368)
Q Consensus 356 ~~~~~l~~~l 365 (368)
+.++.|++++
T Consensus 366 ~i~~~i~~~~ 375 (376)
T TIGR02379 366 RVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 245
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.86 E-value=2.2e-19 Score=163.56 Aligned_cols=331 Identities=13% Similarity=0.025 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh
Q 017633 13 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 92 (368)
Q Consensus 13 ~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~ 92 (368)
.+.++..+++..+...|..+....+|++.++++++. +.+++++||++|+..++.+. ..++|.| +.++.|..+. ..
T Consensus 33 ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g~-~~vv~t~~Gt~Al~la~~al--~~pGD~V-~~~~~f~~~~-~~ 107 (431)
T cd00617 33 AMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFGF-KHIIPTHQGRGAENILFSIL--LKPGRTV-PSNMHFDTTR-GH 107 (431)
T ss_pred HHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHCC-CeEEEcCCHHHHHHHHHHHh--CCCCCEE-ccCCcccchH-HH
Confidence 566666676665544455677789999999999953 57999999999999998766 3456655 4454554443 34
Q ss_pred hhhcCC-CccccCCCCCCCCCCCCCCcccccCC---CCHHHHHHHHHcC-CCCeEEEEEcccCCC-CCcccCCHHHHHHH
Q 017633 93 LVKAGS-GVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENN-KGEIAAIILEPVVGN-SGFIAPKPDFLNAI 166 (368)
Q Consensus 93 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~~~~~-~~~~~~~~~~~~~~~-~g~~~~~~~~l~~i 166 (368)
....|. ++..+..+..+ . ....|+ -|+++|++++++. .+++++++++..+|. +|... +.+.+++|
T Consensus 108 i~~~Ga~pv~v~i~~~~~-~-------~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~-s~~~l~~i 178 (431)
T cd00617 108 IEANGAVPVDLVIDEAHD-A-------QELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPV-SMANLREV 178 (431)
T ss_pred HHhCCCEeEEEecccccc-c-------ccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccC-CHHHHHHH
Confidence 444443 33221111110 0 000011 1899999999853 234676666544444 46544 45559999
Q ss_pred HHHHHHhCCEEEEehhhhch---hc----ccCccccccCCCcchhhhhhhcc-CCcc------ceeeeehH-HHHHHhcC
Q 017633 167 RRITKENGALLIFDEVMTGF---RL----AYGGAQEYFGVTPDLTTLGKIIG-GGLP------VGAYGGRR-DIMEMVAP 231 (368)
Q Consensus 167 ~~l~~~~~~~li~De~~~~~---~~----g~~~~~~~~~~~~di~s~sK~~~-~G~~------iG~v~~~~-~~~~~~~~ 231 (368)
.++|++||++||+|+++... .. +......-..+..++.++||.+. +|++ .||+++++ ++++.++.
T Consensus 179 ~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~ 258 (431)
T cd00617 179 RELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQ 258 (431)
T ss_pred HHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHH
Confidence 99999999999999997421 10 00000000111224567888887 6676 55788875 68887764
Q ss_pred CCCccc-cccCCC-CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 232 AGPMYQ-AGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 232 ~~~~~~-~~t~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
...... ..++++ +....+++..+++...+.++.++..++++++.+.|.+ .|++...+..++.+++++..-..
T Consensus 259 ~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~----~G~~v~~P~Ggh~v~~d~~~~~~-- 332 (431)
T cd00617 259 RVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDE----AGVPIVEPAGGHAVFIDAREFLP-- 332 (431)
T ss_pred hccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH----CCCCccCCCcceEEEEEhHHhcC--
Confidence 221111 112222 3333333333554321223344444444556666655 45655556667777777653110
Q ss_pred cchhcccccHHHHHHHHHHHH-cCeeecCCCC------C-----------ccc---cccCCCHHHHHHHHHHHHHHHh
Q 017633 310 FEDAKKSETTKFARFYRGMLE-EGVYFAPSQF------E-----------AGF---TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~------~-----------~~~---~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...++.-.+.+++.+|.+ .||.+...|. + .+| ++..-|.++++++.+.|..+.+
T Consensus 333 ---~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~ 407 (431)
T cd00617 333 ---HIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYE 407 (431)
T ss_pred ---CCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHh
Confidence 000111236788866664 5788643211 0 122 2345688999999999998874
No 246
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=3.9e-19 Score=162.57 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=190.6
Q ss_pred CcHHHHHHHHHHHHcCC---CC-CCC-----ChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 10 SYLQVLAALGETMKKGT---SF-GAP-----CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~---~~-~~~-----~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.++.+++++.+.+.... .+ .++ .+...++++.++++++ . .+++++++|+++++..++... ..+++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~--~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL--LKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc--cCCCCEE
Confidence 56789999988887632 12 122 2556789999999987 3 458999999999999988653 3467888
Q ss_pred EEEcCCCCCCchhhh---hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 79 IKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 79 i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
++....|+....... ...|..+....... .+. .|++++++.++ ++++++++..+++++|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~~~---~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EGL-------------ISPERIKRAIK---TNTKLIVVSHASNVTGT 152 (376)
T ss_pred EECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCC-------------cCHHHHHHhcC---CCCeEEEEECCCCCccc
Confidence 887766554332211 11133322211111 111 17999999886 36777877777778898
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchh--hhhhhccCCccceeeeehHHH-HHHhcC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDI-MEMVAP 231 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~-~~~~~~ 231 (368)
+.+ +++|.++|+++|+++|+|++|+ .|. ......++ +|++ +..|+++++-.+|.++++++. ++.+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~---~g~~~~~~~~~~--~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQT---AGVIPIDMTELA--IDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhc---cCccCCCchhcC--CCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 888 9999999999999999999995 221 12223333 4654 556999854567777665442 222221
Q ss_pred CCCcc-------------ccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEE----
Q 017633 232 AGPMY-------------QAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICG---- 291 (368)
Q Consensus 232 ~~~~~-------------~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---- 291 (368)
.+... .....+.+.....+..++++.+.+.+ ..++..++.+++++.+.+. .+.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~---~~~~~~~~~~~ 300 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREI---NKVKIYGPADP 300 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCc
Confidence 10000 00112456667777777888876544 3445555555555555442 1111111
Q ss_pred eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC--------------CCccc--cccCCCHHHH
Q 017633 292 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ--------------FEAGF--TSLAHSSDDI 354 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~--------------~~~~~--~~~~~~~~~i 354 (368)
....+++++.+. ..+..++.+.|.++ ||.++.+. ...+| +...++++|+
T Consensus 301 ~~~~~~v~~~~~--------------~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv 366 (376)
T TIGR01977 301 ANRVGVVSFTVE--------------GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEI 366 (376)
T ss_pred cccCCeEEEEEC--------------CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHH
Confidence 112445555542 12346789999987 99987652 12344 3577899999
Q ss_pred HHHHHHHHH
Q 017633 355 QHTITAAEK 363 (368)
Q Consensus 355 ~~~~~~l~~ 363 (368)
++++++|++
T Consensus 367 ~~~~~~l~~ 375 (376)
T TIGR01977 367 EKLLEALSE 375 (376)
T ss_pred HHHHHHHhh
Confidence 999999975
No 247
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=4.7e-19 Score=163.24 Aligned_cols=323 Identities=16% Similarity=0.065 Sum_probs=186.9
Q ss_pred eccCCCcHHHHHHHHHHHHcCC-----CCCC----CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 5 IILFPSYLQVLAALGETMKKGT-----SFGA----PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~-----~~~~----~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.+|..++.+.+++.+++.... .+.. ......++ +.+ +.++ .++++++++|+|+++..++..+....+
T Consensus 34 ~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~ 111 (406)
T TIGR01814 34 NSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTP 111 (406)
T ss_pred CCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcC
Confidence 3466677888898887765411 1111 11222333 334 6666 678999999999999998865422111
Q ss_pred Cc-eEEEEcCCCCCCchhhh---hhcCCCcc--ccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEc
Q 017633 75 RE-RIIKFEGCYHGHADPFL---VKAGSGVA--TLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 147 (368)
Q Consensus 75 ~~-~vi~~~~~~~~~~~~~~---~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~ 147 (368)
++ .|++....|........ ...|..+. ....+ ...+.. |++++++.++...+++++++++
T Consensus 112 ~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~-------------~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 112 KRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETL-------------RLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred CccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCcc-------------CHHHHHHHHHhcCCCeEEEEEe
Confidence 23 44544444444322222 11122220 00111 111111 6888888886544679999999
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHH
Q 017633 148 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 148 ~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~ 226 (368)
++++++|.+.+ +++|+++|++||+++++|++|+ .|. .+....++++..+.+..|++.+|.+ |.+++.++..
T Consensus 179 ~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~---~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~ 250 (406)
T TIGR01814 179 GVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA---VGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHA 250 (406)
T ss_pred ccccccceecC----HHHHHHHHHHcCCEEEEEcccc---cCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhh
Confidence 99999999999 9999999999999999999996 332 2334445554444556699976555 5444433322
Q ss_pred HHhcCC--CCccc--------c----------ccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHH
Q 017633 227 EMVAPA--GPMYQ--------A----------GTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGK 283 (368)
Q Consensus 227 ~~~~~~--~~~~~--------~----------~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~ 283 (368)
..+... +.... . -..++|..+++++.++++.+.+.+ ..++.....+++++.+++...
T Consensus 251 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~ 330 (406)
T TIGR01814 251 HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCG 330 (406)
T ss_pred hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 222210 00000 0 012356678888888999886543 334444455555554444210
Q ss_pred -hcCCceEE----eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc---ccCCCHHHHH
Q 017633 284 -KAGHAICG----GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT---SLAHSSDDIQ 355 (368)
Q Consensus 284 -~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~---~~~~~~~~i~ 355 (368)
..++.... ...++++.+.+. ....++.+.|.++||.+.......+|+ +++++++|++
T Consensus 331 ~~~~~~i~~~~~~~~r~~~v~~~~~---------------~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did 395 (406)
T TIGR01814 331 GPPVLTIITPRDHAQRGCQLSLTHP---------------VPGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVY 395 (406)
T ss_pred CCCceEEeCCCChhhcCCeEEEEec---------------CCHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHH
Confidence 00111110 112334444431 124678999999999987654445554 3578999999
Q ss_pred HHHHHHHHHH
Q 017633 356 HTITAAEKVL 365 (368)
Q Consensus 356 ~~~~~l~~~l 365 (368)
+++++|++++
T Consensus 396 ~l~~~l~~~~ 405 (406)
T TIGR01814 396 DAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 248
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.86 E-value=2.9e-19 Score=163.60 Aligned_cols=316 Identities=15% Similarity=0.081 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHHHHHcCCC-----CCCCChhHHHHHHHHHhhC---C--CCCeEEEeCChHHHHHHHHHHHHH----hcC
Q 017633 9 PSYLQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAV---P--SIEMVRFVNSGTEACMGVLRLARA----FTG 74 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~---~--~~~~v~~~~~gt~a~~~al~~~~~----~~~ 74 (368)
..++.|++++.+.+..... +.++......+++.++++. + +++++++++|+++++..+++.... -++
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~ 89 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGG 89 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCC
Confidence 3567899999888865211 1122334455666655544 2 368999999999999998875421 123
Q ss_pred CceEEEEcCCCCCCchhhh--hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 75 RERIIKFEGCYHGHADPFL--VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
++.|++....++....... ...|..+...+.... +.. |+++++++++ ++++++++...+++
T Consensus 90 ~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~-------------d~~~l~~~i~---~~t~lv~~~~~~n~ 152 (382)
T TIGR03403 90 KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTI-------------TAEQVREAIT---EKTALVSVMWANNE 152 (382)
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCC-------------CHHHHHHhcc---cCCeEEEEEcccCC
Confidence 4567776544443322221 122332222211111 111 7899999887 35677877777778
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhh--hhccCCccceeeeehHHHH--H
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIM--E 227 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~--~ 227 (368)
+|.+.+ +++|.++|++||+++++|++|. .|. ......+ .+|++++| |.++ +.++|++++++... .
T Consensus 153 tG~~~~----~~~I~~la~~~g~~~ivD~a~~---~g~~~~~~~~~--~~D~~~~s~~K~~g-p~G~g~l~vr~~~~~~p 222 (382)
T TIGR03403 153 TGMIFP----IKEIGEICKERGVLFHTDAVQA---IGKIPVDVQKA--GVDFLSFSAHKFHG-PKGVGGLYIRKGVELTP 222 (382)
T ss_pred CccccC----HHHHHHHHHHcCCEEEEechhh---cCCCccCcccc--CCCEEEEcchhhCC-CCceEEEEECCCCCCCC
Confidence 898888 9999999999999999999985 221 1222223 35666554 9755 23467776655421 1
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec----cceEEEEee
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI----SGMFGFFFT 303 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~ 303 (368)
.+............+.|..++.++.++++...+ ..+...++.+.+++++.+.+.+.+......+. .+++.+.+.
T Consensus 223 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T TIGR03403 223 LFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK 300 (382)
T ss_pred cccCCCCCCCcccCCcChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC
Confidence 111000011112345677788788888876643 23444455555555555544433322222111 224344431
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------Cccc--cccCCCHHHHHHHH
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGF--TSLAHSSDDIQHTI 358 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~--~~~~~~~~~i~~~~ 358 (368)
.....++...|.++||.++.|.. ..+| +...++++|+++++
T Consensus 301 --------------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~ 366 (382)
T TIGR03403 301 --------------GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTI 366 (382)
T ss_pred --------------CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHH
Confidence 12246777778899999996421 1234 35778999999999
Q ss_pred HHHHHHHhh
Q 017633 359 TAAEKVLRQ 367 (368)
Q Consensus 359 ~~l~~~l~~ 367 (368)
+.|++++++
T Consensus 367 ~~l~~~~~~ 375 (382)
T TIGR03403 367 EVFKKAVQR 375 (382)
T ss_pred HHHHHHHHH
Confidence 999988754
No 249
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.85 E-value=8.8e-19 Score=151.52 Aligned_cols=307 Identities=14% Similarity=0.092 Sum_probs=193.9
Q ss_pred CChhHHHHHHHHHhhCC-------CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccc
Q 017633 31 PCLLENVLAEMVISAVP-------SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 102 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-------~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 102 (368)
++....+|...+.++.+ -.+ +++.|+|.|+++...++++. +.++.|++-.-+|.....+.-.. |
T Consensus 98 ~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~--N~gd~vlie~~ty~~AL~s~~a~-g----- 169 (472)
T KOG0634|consen 98 QSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI--NRGDHVLIEEYTYPSALQSMEAL-G----- 169 (472)
T ss_pred cccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh--cCCCceEEecccchHHHHhcccc-C-----
Confidence 44555667777766543 123 89999999999999998874 56788999877776543222211 1
Q ss_pred cCCCCCCCCCCCCCCcccccCCC----CHHHHHHHHHcC------CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 017633 103 LGLPDSPGVPKGATYETLTAPFN----DVSALENLFENN------KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE 172 (368)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~ 172 (368)
..++.++++ +++.|++.+... .+++.++.+-|..+|+++...+.+..++|.+||+|
T Consensus 170 --------------v~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArK 235 (472)
T KOG0634|consen 170 --------------VKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARK 235 (472)
T ss_pred --------------ceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHH
Confidence 122223222 799999998752 24578999999988855555566669999999999
Q ss_pred hCCEEEEehhhhch-hc---cc--------------------CccccccCCCcchhhhhhhccCCccceeeeehHHHHHH
Q 017633 173 NGALLIFDEVMTGF-RL---AY--------------------GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 173 ~~~~li~De~~~~~-~~---g~--------------------~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
||+++|+||.|--+ .. +. +...+..|.+..+-||||-+++|+|+||+.++..+++.
T Consensus 236 yDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~r 315 (472)
T KOG0634|consen 236 YDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKR 315 (472)
T ss_pred cCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHH
Confidence 99999999999433 22 10 01111122233356899999999999999998876665
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH-------HHHHHHHhcCCceEEeeccceEEEE
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ-------GIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~-------~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
+.. .....|.+++.+++...-+.++....+++.+.+.+.+..+-. .+.+-+...-.....+..|.|+|+.
T Consensus 316 il~---~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~ 392 (472)
T KOG0634|consen 316 ILD---LAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVE 392 (472)
T ss_pred Hhh---hcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEE
Confidence 542 223355566777777777777766556544444444433333 3333222221334555667788988
Q ss_pred eecCCCcccchhcccccHHH-HHHHHHHHHcCeeecCCCCCc-----------cccc-cCCCHHHHHHHHHHHHHHHhh
Q 017633 302 FTEGPVYNFEDAKKSETTKF-ARFYRGMLEEGVYFAPSQFEA-----------GFTS-LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gi~~~~~~~~~-----------~~~~-~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.-. .+. .+ ..-.+. +.+...+.++||.+.+|.... +|++ ...+.++++++++++..++.+
T Consensus 393 i~~~---~~~-~~-~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 393 IPYI---NFD-TK-KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred eccc---ccc-cc-cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 8400 000 00 111223 446667778999999884332 2333 334778999999999988864
No 250
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=9.1e-20 Score=166.77 Aligned_cols=222 Identities=15% Similarity=0.150 Sum_probs=146.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
.+++...+|++.++++++. +.+++++||++|+..++..+ ..++|.|++..+.|.++.. .+...
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~-~~~l~~~sG~~Ai~~al~al--~~~GD~Vl~~~~~Y~~~~~-~~~~~------------- 135 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGT-EAAYCTASGMSAISSVLLQL--CSSGGHVVASNTLYGGTHA-LLAHF------------- 135 (418)
T ss_pred CCChhHHHHHHHHHHHhCC-CeEEEEccHHHHHHHHHHHH--hCCCCEEEEcCCcHHHHHH-HHHHh-------------
Confidence 3577899999999999864 45678899999999999765 2467889888776654322 11110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
..+..+.++..++..|+++++++++. +++++++++..+|++|.+.+ +++|+++|++||++||+||+|..+..
T Consensus 136 -~~~~~G~~~~~~d~~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~- 207 (418)
T PLN02242 136 -LPRKCNITTTFVDITDLEAVKKAVVP--GKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVL- 207 (418)
T ss_pred -hhhccCceEEEcCCCCHHHHHHhcCc--CCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCC-
Confidence 00112233444445589999999873 24888889888888888887 99999999999999999999964411
Q ss_pred cCccccccCCCcchhhhhhhccC-Ccc-ceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~-iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~ 266 (368)
....++.+.-+.|+||.+++ |++ .||+++++++++.+....... ...++.++..+.+++.+.. +.+ +...++
T Consensus 208 ---~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~-~~~~g~~~~~~~A~l~~~~-l~tl~~r~~~ 282 (418)
T PLN02242 208 ---SPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA-LMLLGPTMNPKVAFELSER-LPHLSLRMKE 282 (418)
T ss_pred ---CHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh-hhccCCCCCHHHHHHHHcC-CCcHHHHHHH
Confidence 11123443345689999984 666 588898888887776321110 0112223333444333322 211 224567
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIIDA 281 (368)
Q Consensus 267 ~~~~~~~l~~~l~~~ 281 (368)
..++++++.+.|++.
T Consensus 283 ~~~~a~~la~~L~~~ 297 (418)
T PLN02242 283 HCRRAMEYAKRMKEL 297 (418)
T ss_pred HHHHHHHHHHHHHhC
Confidence 888888888888875
No 251
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=4.1e-19 Score=156.47 Aligned_cols=308 Identities=19% Similarity=0.161 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh
Q 017633 13 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 92 (368)
Q Consensus 13 ~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~ 92 (368)
+-.+++.+.+..+..- +-+...++.++++++.+ ...++.++|||.|+.++++++. ..++|.||+.+-+|.++..+.
T Consensus 16 ~e~~~v~~vl~sg~i~--~G~~v~~FE~~~ae~~G-~k~ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvATan~i 91 (374)
T COG0399 16 EELAAVQEVLKSGWLT--GGPFVRRFEQAFAEYLG-VKYAVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVATANAV 91 (374)
T ss_pred HHHHHHHHHHHcCCee--cChHHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHHHHHH
Confidence 4556666666653222 24556788888888884 4567778899999999998653 568899999998888876676
Q ss_pred hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 017633 93 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE 172 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~ 172 (368)
+..+..++..+-.+..-++ |++.+|++|+ +++++|+.....+ ...+ +++|.++|++
T Consensus 92 ~~~Ga~PVFvDid~~T~ni--------------d~~~ie~aIt---~~tKAIipVhl~G---~~~d----m~~i~~la~~ 147 (374)
T COG0399 92 LLVGAKPVFVDIDPDTLNI--------------DPDLIEAAIT---PRTKAIIPVHLAG---QPCD----MDAIMALAKR 147 (374)
T ss_pred HHcCCeEEEEecCCcccCC--------------CHHHHHHHcc---cCCeEEEEehhcc---CCCC----HHHHHHHHHH
Confidence 6666666655444444443 8999999999 4689988877764 4455 9999999999
Q ss_pred hCCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccCCccceeeee-hHHHHHHhc---CCCCc---------
Q 017633 173 NGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGG-RRDIMEMVA---PAGPM--------- 235 (368)
Q Consensus 173 ~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~G~~iG~v~~-~~~~~~~~~---~~~~~--------- 235 (368)
||++||+|.+|+ .|..+.-...|-.-|+.+|| |.+++| -.|+++. ++++++.++ ..+..
T Consensus 148 ~~l~vIEDaAqa---~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~ 223 (374)
T COG0399 148 HGLPVIEDAAQA---HGATYKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLH 223 (374)
T ss_pred cCCeEEEEcchh---ccCeecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCcccccee
Confidence 999999999995 33333333444445666666 999977 5677766 466666554 22221
Q ss_pred -cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec---cceEEEEeecCCCcccc
Q 017633 236 -YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI---SGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 236 -~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 311 (368)
..+..+..+.+.++.++..|+.+ +++.++.+++.+.+.+.|+++.. ...+....+. ..++.+.+..
T Consensus 224 ~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i~~~~------- 293 (374)
T COG0399 224 EELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTILVDE------- 293 (374)
T ss_pred eecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEEEecC-------
Confidence 12455566778888888888766 55667777777777777766421 1111111111 1222222211
Q ss_pred hhcccccHHHHHHHHHHHHcCe----eecCCCCC------------c-----------ccc--ccCCCHHHHHHHHHHHH
Q 017633 312 DAKKSETTKFARFYRGMLEEGV----YFAPSQFE------------A-----------GFT--SLAHSSDDIQHTITAAE 362 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi----~~~~~~~~------------~-----------~~~--~~~~~~~~i~~~~~~l~ 362 (368)
.......+.+.|.++|| +..|.... . +++ ...++++|+++.++.|+
T Consensus 294 -----~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 294 -----EGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK 368 (374)
T ss_pred -----CCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 12335778899999954 44442110 0 122 25679999999999999
Q ss_pred HHHhh
Q 017633 363 KVLRQ 367 (368)
Q Consensus 363 ~~l~~ 367 (368)
+++.+
T Consensus 369 ~~~~~ 373 (374)
T COG0399 369 EVLGS 373 (374)
T ss_pred HHhcc
Confidence 98864
No 252
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=4.7e-19 Score=161.23 Aligned_cols=309 Identities=11% Similarity=0.038 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
++-.+++.+.+..+..++ ..+...+++++++++++ .+++++++||++|+..++..+ ...+++.|++...+|......
T Consensus 11 ~~~~~~~~~~l~~~~~~g-~~~~~~~~e~~la~~~g-~~~~v~~~sgt~al~~~l~~~-~~~~Gd~Viv~~~t~~~~~~~ 87 (375)
T PRK11706 11 GTELDYIQQAMSSGKLCG-DGGFTRRCQQWLEQRFG-SAKVLLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTANA 87 (375)
T ss_pred HHHHHHHHHHHHcCCccC-CCHHHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHHh-CCCCCCEEEECCCCcHHHHHH
Confidence 344666777776643333 24566888888888874 468999999999999887654 235678999988888765443
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
. ...|..+............ |+++++++++ ++++++++.+ .+|...+ +++|.++|+
T Consensus 88 ~-~~~G~~~v~~d~d~~~~~~-------------d~~~le~~i~---~~tk~i~~~~---~~G~~~~----~~~i~~la~ 143 (375)
T PRK11706 88 F-VLRGAKIVFVDIRPDTMNI-------------DETLIEAAIT---PKTRAIVPVH---YAGVACE----MDTIMALAK 143 (375)
T ss_pred H-HHcCCEEEEEecCCCcCCc-------------CHHHHHHhcC---CCCeEEEEeC---CCCCccC----HHHHHHHHH
Confidence 3 3334433222221111111 7999999987 3567666532 3566666 999999999
Q ss_pred HhCCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccCCccceeeeehHHHHHHhcC---CCC----c-----
Q 017633 172 ENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRRDIMEMVAP---AGP----M----- 235 (368)
Q Consensus 172 ~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~G~~iG~v~~~~~~~~~~~~---~~~----~----- 235 (368)
+||+++|+|++|+.. ..+.....+..-|+.+|| |.+++|.+.++++.++++.+.++. .+. .
T Consensus 144 ~~~i~vIeD~a~a~g---~~~~~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 220 (375)
T PRK11706 144 KHNLFVVEDAAQGVM---STYKGRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQV 220 (375)
T ss_pred HcCCEEEEECccccc---cccCCeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCC
Confidence 999999999999633 111111123223666666 999877777777777777754431 110 0
Q ss_pred ------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH--hcCCceEE---eeccceEEEEeec
Q 017633 236 ------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK--KAGHAICG---GYISGMFGFFFTE 304 (368)
Q Consensus 236 ------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~---~~~~~~~~~~~~~ 304 (368)
..+.++..+.+.++.+++.++.+ +...++.+++.+++++.|.++.. ....+... .....++++.+.
T Consensus 221 ~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 297 (375)
T PRK11706 221 DKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR- 297 (375)
T ss_pred CcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC-
Confidence 01233334556666666666654 33445556666666666654310 00011000 111223344332
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc--------------------------cccc--cCCCHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--------------------------GFTS--LAHSSDDIQH 356 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--------------------------~~~~--~~~~~~~i~~ 356 (368)
+..+..++.+.|.++||.++....+. +.++ ...+++|+++
T Consensus 298 ------------~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~ 365 (375)
T PRK11706 298 ------------DLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRT 365 (375)
T ss_pred ------------CcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHH
Confidence 12245789999999999875321110 1222 3468999999
Q ss_pred HHHHHHHHH
Q 017633 357 TITAAEKVL 365 (368)
Q Consensus 357 ~~~~l~~~l 365 (368)
.++.|++++
T Consensus 366 i~~~i~~~~ 374 (375)
T PRK11706 366 VIDTILEFF 374 (375)
T ss_pred HHHHHHHHh
Confidence 999999865
No 253
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=2.7e-18 Score=158.88 Aligned_cols=312 Identities=15% Similarity=0.124 Sum_probs=176.7
Q ss_pred CcHHHHHHHHHHHHcCC--C-----CCCCChhHHHH----HHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKKGT--S-----FGAPCLLENVL----AEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~--~-----~~~~~~~~~~l----~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+|+|++++.+.+.... . +....+....+ ++.+++.++ ....+++ +||++|+..++..+ ..++|.
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~al~~~l~~l--~~~gd~ 113 (416)
T PRK00011 37 VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQANAAVYFAL--LKPGDT 113 (416)
T ss_pred CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeec-CCchHHHHHHHHHh--cCCCCE
Confidence 57889999877653211 1 11111223333 447788887 4444555 46899999888766 356789
Q ss_pred EEEEcCCCCCCchhh--hhhcCC--CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 78 IIKFEGCYHGHADPF--LVKAGS--GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 78 vi~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
|++.++.|.+..... ....+. .+.........+ ..|+++++++++.+ +++++++.. ++.
T Consensus 114 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~d~~~l~~~i~~~--~~k~v~~~~--~~~ 176 (416)
T PRK00011 114 ILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETG-------------LIDYDEVEKLALEH--KPKLIIAGA--SAY 176 (416)
T ss_pred EEEeccccCCccccccccccccceeeEeecCcCcccC-------------CcCHHHHHHHHHhc--CCCEEEECC--CcC
Confidence 999888776532111 111111 111111100001 11899999999742 466666642 223
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccC-ccccccCCCcchhhhhhhccCCccceeeeeh-HHHHHHh
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR-RDIMEMV 229 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~-~~~~~~~ 229 (368)
|...+ +++|.++|++||+++|+|++| .|+ ..|.. .... +.+.-+.|+||++ +|++.||++++ +++++.+
T Consensus 177 ~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l-~g~~gg~i~~~~~~~~~~l 249 (416)
T PRK00011 177 SRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL-RGPRGGLILTNDEELAKKI 249 (416)
T ss_pred CCccC----HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC-CCCCceEEEeCCHHHHHHH
Confidence 44455 999999999999999999998 443 22211 1111 2222245789998 56899999885 6787777
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHH-HHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecC
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTL-KRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEG 305 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l-~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 305 (368)
.........+ +.....++++..++ +.+.+ +++.+++.++++++++.|++. ++.... ....+++++.+..
T Consensus 250 ~~~~~~~~~~--~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~i~~~~- 322 (416)
T PRK00011 250 NSAVFPGIQG--GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER----GFRVVSGGTDNHLVLVDLRS- 322 (416)
T ss_pred HHHhCccccC--CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC----CCeeeecCCCCeEEEEeCcc-
Confidence 5322111111 12222333333333 32321 335566677777777777653 332111 1223566666531
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC----------ccccc------cCCCHHHHHHHHHHHHHHHh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE----------AGFTS------LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~----------~~~~~------~~~~~~~i~~~~~~l~~~l~ 366 (368)
...+..++.+.|.++||.+..+..+ .+|+. ..++++|++++++.|++++.
T Consensus 323 -----------~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 323 -----------KGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred -----------cCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 1112467888899999999843211 12331 25679999999999998864
No 254
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=6.5e-20 Score=167.03 Aligned_cols=289 Identities=15% Similarity=0.100 Sum_probs=182.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++++.. ..++++||+.|+..++... ..+++.|++..+.|.+. ...+......
T Consensus 58 ~~~pt~~~Le~~lA~l~G~~-~al~~~sG~~Ai~~~l~al--~~~Gd~Vv~~~~~y~~~-~~~~~~~~~~---------- 123 (386)
T PRK06767 58 LGNPTVKLFEERMAVLEGGE-EALAFGSGMAAISATLIGF--LKAGDHIICSNGLYGCT-YGFLEVLEEK---------- 123 (386)
T ss_pred CCCcchHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCcHHHH-HHHHHHHHhh----------
Confidence 45677899999999999754 4556668999988887555 24678888877665443 2222221110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
.+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|.++|+++|+++|+|++|+....+
T Consensus 124 -----~gi~~~~~~~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~ 191 (386)
T PRK06767 124 -----FMITHSFCDMETEADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSPYLQ 191 (386)
T ss_pred -----cCeEEEEeCCCCHHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 011222233347899999887 46888888888888888888 999999999999999999999522111
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccc-eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~i-G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. . ..+.+.-+.|+||.++| |.++ |+++++++.++.+........++ ..+++.+++++..++.+ ....++.
T Consensus 192 ~p--l-~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~--~~~~~~a~l~~~~L~tl--~~r~~~~ 264 (386)
T PRK06767 192 RP--L-ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGG--IMAPFDAWLLLRGLKTL--AVRMDRH 264 (386)
T ss_pred Cc--h-hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCC--CCCHHHHHHHHcCCCcH--HHHHHHH
Confidence 11 1 12332234578899985 6775 78888887665543110011112 33566666655555433 2345667
Q ss_pred HHHHHHHHHHHHHHHHhcCCce------------EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeee
Q 017633 268 NKITGELTQGIIDAGKKAGHAI------------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 335 (368)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 335 (368)
.++++++.+.|++. +... ...+.++++.|++.. ...+..+|.+.|...++.+
T Consensus 265 ~~~a~~la~~L~~~----p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~------------~~~~~~~f~~~l~~~~~~~ 328 (386)
T PRK06767 265 CDNAEKIVSFLKNH----DAVEGVWYPEGELASRQMKRGGGVISFSIKG------------GKEETQAFINDLHFITIAV 328 (386)
T ss_pred HHHHHHHHHHHHcC----CCccEEECCCcHHHHHhCCCCCceEEEEEcC------------CHHHHHHHHHhCCccEEec
Confidence 77777777777653 2111 112456677887631 2234678888887777777
Q ss_pred cCCCCCcc-------------------------ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 336 APSQFEAG-------------------------FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 336 ~~~~~~~~-------------------------~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+-|+.... .+++.+.-||.+.+++-|++++++
T Consensus 329 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 329 SLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 66542210 123455667888999999988865
No 255
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.84 E-value=1.4e-18 Score=159.86 Aligned_cols=249 Identities=15% Similarity=0.096 Sum_probs=152.7
Q ss_pred CCcHHHHHHHHHHHHcCCCC---CC------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh--cCCc
Q 017633 9 PSYLQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TGRE 76 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~---~~------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--~~~~ 76 (368)
.-++.+++++.+++...... .. ..+..+++++.++++++ +.+++++++|+|++++.++..+... .+++
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 93 (402)
T TIGR02006 14 PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGN 93 (402)
T ss_pred CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCC
Confidence 35788999998887542111 11 11346677888999998 6789999999999999998655321 3566
Q ss_pred eEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 77 RIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
.|++....|+......... .|..+...+... .+.. |++++++.++ ++++++++...++++|
T Consensus 94 ~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~-------------d~~~l~~~l~---~~~~lv~v~~~~n~tG 156 (402)
T TIGR02006 94 HIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS-NGLI-------------DLEELKAAIR---DDTILVSIMHVNNEIG 156 (402)
T ss_pred EEEECCCccHHHHHHHHHHHhcCCEEEEEccCC-CCcC-------------CHHHHHHhcC---CCCEEEEEECCCcCce
Confidence 7777665544332222221 233222221111 1111 7899999886 3578888888888889
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcC-
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAP- 231 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~- 231 (368)
.+.+ +++|.++|++||+++++|++|+ .|.. .++..+..+|++++| |.++ +..+|+++++++....+..
T Consensus 157 ~~~~----~~~I~~l~~~~g~~livD~a~a---~g~~-~~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~ 227 (402)
T TIGR02006 157 VIQD----IAAIGEICRERKVFFHVDAAQS---VGKI-PINVNELKVDLMSISGHKIYG-PKGIGALYVRRKPRVRLEAL 227 (402)
T ss_pred eccc----HHHHHHHHHHcCCEEEEEcchh---cCCc-ccCccccCCCEEEEehhhhcC-CCceEEEEEccCCCCCCCce
Confidence 8888 9999999999999999999996 2221 122223456877766 9664 4458988877653332221
Q ss_pred --CCC-ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc
Q 017633 232 --AGP-MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 232 --~~~-~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
.+. .......+.+.....+..++++.+.+ ..+...++.+.+++.+.+.+...
T Consensus 228 ~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 228 IHGGGHERGMRSGTLPTHQIVGMGEAFRIAKE--EMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred ecCCCccCCccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcC
Confidence 100 00111224456666666688887643 23444555555666665544433
No 256
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=5.2e-20 Score=167.00 Aligned_cols=216 Identities=19% Similarity=0.169 Sum_probs=152.2
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+.++...+|+++++++++. +..++++||++|+..++..+ ..+++.|++....|++.........
T Consensus 37 ~~~p~~~~le~~la~l~g~-~~a~~~~sG~~Ai~~~l~~l--~~~gd~Vl~~~~~y~~~~~~~~~~~------------- 100 (369)
T cd00614 37 IGNPTVDALEKKLAALEGG-EAALAFSSGMAAISTVLLAL--LKAGDHVVASDDLYGGTYRLFERLL------------- 100 (369)
T ss_pred CCChhHHHHHHHHHHHHCC-CCEEEEcCHHHHHHHHHHHH--cCCCCEEEECCCCcchHHHHHHHHH-------------
Confidence 4577899999999999864 45677788999999999766 3467888888887776532211110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++.+|++++++.++ ++++++++++++|++|.+.+ +++|+++|++||+++|+|++|...
T Consensus 101 ---~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~--- 167 (369)
T cd00614 101 ---PKLGIEVTFVDPDDPEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATP--- 167 (369)
T ss_pred ---hhcCeEEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcch---
Confidence 11223445556668999999887 46889999988888898888 999999999999999999999532
Q ss_pred cCccccccCCCcch--hhhhhhccC-C-ccceeeeehH-HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 190 YGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 190 ~~~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
.. ...+...+|+ .|++|.++| | .+.|++++++ ++++.++.. ........++..+++++..++.+ +...
T Consensus 168 ~~--~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~---~~~~g~~~~p~~a~~~l~~l~tl--~~r~ 240 (369)
T cd00614 168 YL--QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL---RLALGTILSPFDAWLLLRGLKTL--PLRM 240 (369)
T ss_pred hc--CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH---HHhhCCCCCHHHHHHHHcCCCCH--HHHH
Confidence 11 1112233454 488999984 4 7899998876 777777632 12233356777777766665533 2346
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017633 265 EYLNKITGELTQGIIDA 281 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~ 281 (368)
++..++++++.+.|++.
T Consensus 241 ~~~~~na~~la~~L~~~ 257 (369)
T cd00614 241 ERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 67777888888877764
No 257
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.1e-19 Score=165.95 Aligned_cols=294 Identities=14% Similarity=0.098 Sum_probs=185.1
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++++.. .+++++||+.|+..++... ..+++.|++.++.|..+ .......
T Consensus 61 ~~~p~~~~Le~~iA~~~g~~-~~l~~~sG~~Ai~~al~~l--l~~Gd~Vl~~~~~y~~~-~~~~~~~------------- 123 (400)
T PRK06234 61 LGNPTSTEVENKLALLEGGE-AAVVAASGMGAISSSLWSA--LKAGDHVVASDTLYGCT-FALLNHG------------- 123 (400)
T ss_pred CCCccHHHHHHHHHHHhCCC-cEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCccchH-HHHHHHH-------------
Confidence 45677899999999999753 5788889999998888654 35678888887665543 2222110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCEEEEehhhhchh
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFR 187 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~--~~~li~De~~~~~~ 187 (368)
....+.++..++..|+++++++++ +++++++++.++|++|.+.+ +++|.++|++| |+++|+||+|....
T Consensus 124 --~~~~G~~v~~vd~~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~~ 194 (400)
T PRK06234 124 --LTRYGVEVTFVDTSNLEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTPY 194 (400)
T ss_pred --HhhCCeEEEEECCCCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCchh
Confidence 011223344455558999999997 46888888888888888888 99999999997 99999999996331
Q ss_pred cccCccccccCCCcchhhhhhhccC-Cccc-eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 188 LAYGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~sK~~~~-G~~i-G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.+.. . .++.+.-+.|+||.+++ |+++ ||+++++++++.++..+. ....+...++..++.++..++.+ +...+
T Consensus 195 ~~~~--l-~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~-~~~~g~~l~p~~a~l~~~~l~tl--~~r~~ 268 (400)
T PRK06234 195 IQRP--L-QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGI-KDMTGSVIGPFEAFLIIRGMKTL--QIRME 268 (400)
T ss_pred cCCc--h-hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHH-HHhcCCCCCHHHHHHHHhccCcH--HHHHH
Confidence 1111 1 12333334578899985 7665 888998888877753211 11123466778777777766544 33556
Q ss_pred HHHHHHHHHHHHHHHHHH--h--cC-Cc---------eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 266 YLNKITGELTQGIIDAGK--K--AG-HA---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~--~--~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+..++.+++.+.|.+... + ++ +. ....+.|.++.+.+.. ......+|.+.|.--
T Consensus 269 ~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~------------~~~~~~~f~~~l~~~ 336 (400)
T PRK06234 269 KHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG------------GVEEGKVVMNNVKLA 336 (400)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC------------cHHHHHHHHHhCCcc
Confidence 677777777777765210 0 00 00 0112456677777631 112245666666544
Q ss_pred CeeecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 332 GVYFAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 332 Gi~~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++..+-|+... ..+++...-|+.+.+++.|+++++.
T Consensus 337 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 337 TLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDL 397 (400)
T ss_pred eEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 44444332111 0123445557888888888888764
No 258
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=5.3e-18 Score=155.83 Aligned_cols=312 Identities=14% Similarity=0.079 Sum_probs=181.0
Q ss_pred cHHHHHHHHHHH-HcC-C-----CCCCCChhHHHHHH----HHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 11 YLQVLAALGETM-KKG-T-----SFGAPCLLENVLAE----MVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 11 ~~~v~~a~~~~~-~~~-~-----~~~~~~~~~~~l~~----~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
+|.+++++...+ ... . .+...++...+|.+ .++++++..+..++++||+.|+..++... ..++|.|+
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al--~~~GD~Vl 118 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLAL--LKPGDTIL 118 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHh--cCCCCEEE
Confidence 899999998885 442 1 11112466788887 99999975555466789999999999766 35788888
Q ss_pred EEcCCCCCCchhhhhhc--CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEc-ccCCCCCcc
Q 017633 80 KFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE-PVVGNSGFI 156 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~-~~~~~~g~~ 156 (368)
+...++.+......... +.......+. .+.. ....|++++++.++.. ++++++++ +.+ |..
T Consensus 119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~-~~~~d~~~le~~l~~~--~~klVi~~~~~~---g~~ 182 (416)
T PRK13034 119 GMSLSHGGHLTHGAKVSLSGKWYNAVQYG----------VDRL-TGLIDYDEVEELAKEH--KPKLIIAGFSAY---PRE 182 (416)
T ss_pred EcCccceeeeecCCcceeccceeeeEEcc----------cccc-cCCcCHHHHHHHHhhc--CCeEEEECCCcc---ccc
Confidence 87766554221111110 0000000000 0000 0113899999998643 46777774 443 444
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcch--hhhhhhccCCccceeeeehH-HHHHHhcC
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRR-DIMEMVAP 231 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~-~~~~~~~~ 231 (368)
.+ +++|.++|++||++||+|++| .|. ..|.. ....+ ..|+ .+++|+++|+. .|++++++ .+.+.++.
T Consensus 183 ~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~~~~~~~~ 254 (416)
T PRK13034 183 LD----FARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEEIAKKINS 254 (416)
T ss_pred cC----HHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC-CceEEEEeCcccCCCCC-CeEEEECcHHHHHHHHh
Confidence 55 999999999999999999999 333 22221 11111 2454 46789996543 46666654 44444442
Q ss_pred CCCccccccCCCCHHHHHHHH-HHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCC
Q 017633 232 AGPMYQAGTLSGNPLAMTAGI-HTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPV 307 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~-~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 307 (368)
. .+.+.+.+..+...+++. +.++.+.. .++.+++.++.++++++|.+. ++..... ...+++.+.+..
T Consensus 255 ~--~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~----G~~~~~~~~~t~i~~v~~~~--- 325 (416)
T PRK13034 255 A--VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER----GYDLVSGGTDNHLLLVDLRP--- 325 (416)
T ss_pred h--cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc----CCEeccCCCCCcEEEEEcCC---
Confidence 1 111111112233333333 44444422 234678888888888888764 3221111 234555665532
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCC------CCC----cccc--c----cCCCHHHHHHHHHHHHHHHh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPS------QFE----AGFT--S----LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~----~~~~--~----~~~~~~~i~~~~~~l~~~l~ 366 (368)
.......+.+.|.++||.+... ..+ .+|+ + ..++++|++++++.|++++.
T Consensus 326 ---------~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 326 ---------KGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred ---------CCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 1223456778888899999752 112 2332 2 36679999999999998875
No 259
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=2e-19 Score=162.75 Aligned_cols=233 Identities=18% Similarity=0.114 Sum_probs=151.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+... .++++||++|+..++.++ .++++|++.++.|++........
T Consensus 49 ~~~pt~~~le~~la~l~g~~~-~~~~~sG~~ai~~~~~ll---~~Gd~Vl~~~~~y~~t~~~~~~~-------------- 110 (366)
T PRK08247 49 TGNPTRGVLEQAIADLEGGDQ-GFACSSGMAAIQLVMSLF---RSGDELIVSSDLYGGTYRLFEEH-------------- 110 (366)
T ss_pred CCCchHHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHh---CCCCEEEEecCCcCcHHHHHHHH--------------
Confidence 566788999999999997533 477788999998766432 46789999998888753222111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-chhc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~ 188 (368)
....+.++..++..|+++++++++ +++++++++.++|+.+...+ +++|+++|++||+++|+||+|. ++..
T Consensus 111 --~~~~G~~v~~vd~~d~~~l~~~i~---~~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 111 --WKKWNVRFVYVNTASLKAIEQAIT---PNTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred --hhccCceEEEECCCCHHHHHHhcc---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccccc
Confidence 011223344455558999999987 36778777666666555555 9999999999999999999994 2211
Q ss_pred ccCccccccCCCcchhhhhhhccC--Cccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.. . ..+.+.-+.|+||.++| +.+.|+++++ +++.+.+.. .....+...++..+..+...++.+ ....+
T Consensus 182 -~p--~-~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~l~tl--~~r~~ 252 (366)
T PRK08247 182 -RP--L-EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY---YQNAAGAVLSPFDSWLLIRGMKTL--ALRMR 252 (366)
T ss_pred -Cc--h-hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH---HHHhcCCCCChHHHHHHHhccCcH--HHHHH
Confidence 11 1 12333445689999985 4789998885 666666542 122233455677777766666544 22344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCce--EEeeccceEEEEe
Q 017633 266 YLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFF 302 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~ 302 (368)
+.+++++.+.+.|++ ++... ..++.|.++.|.+
T Consensus 253 ~~~~~a~~l~~~L~~----~p~v~~v~~P~~gg~~sf~~ 287 (366)
T PRK08247 253 QHEENAKAIAAFLNE----QPGVTDVLYPGRGGMLSFRL 287 (366)
T ss_pred HHHHHHHHHHHHHHh----CCCeeEEecCCcCcEEEEEE
Confidence 556666666666655 33222 2444677778776
No 260
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=5.2e-18 Score=139.87 Aligned_cols=333 Identities=14% Similarity=0.168 Sum_probs=195.4
Q ss_pred eeccCCCcHHHHHHHHHHHHc--------------CCCCCCC---ChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHH
Q 017633 4 LIILFPSYLQVLAALGETMKK--------------GTSFGAP---CLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 63 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~--------------~~~~~~~---~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~ 63 (368)
.+.+|.++|..+-+|.++.++ .-+|+.| ..+...|...+.+.++ ....+.+|+|..++.-
T Consensus 32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fF 111 (417)
T COG3977 32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFF 111 (417)
T ss_pred ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHH
Confidence 577788777544444333332 1134333 2455666666667776 3678999986666666
Q ss_pred HHHHHHHHhc--CC-ceEEE-EcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC
Q 017633 64 GVLRLARAFT--GR-ERIIK-FEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNK 138 (368)
Q Consensus 64 ~al~~~~~~~--~~-~~vi~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~ 138 (368)
-+..++.... +. ++|+. ..+.|-|+..+.+.-..- .++ |..+... .+.=.+++ |.+.|+ +.
T Consensus 112 YlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~f----Vs~kP~iel~~--~g~FKY~v---DF~~l~--i~--- 177 (417)
T COG3977 112 YLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLF----VSAKPNIELLP--AGQFKYHV---DFEHLH--IG--- 177 (417)
T ss_pred HHHHHhcCccCCCcceeEeeccChhhccccccccCccce----eeccCCccccc--ccceeecc---CHHHcc--cc---
Confidence 6556553331 22 23333 366676654332221100 001 1111111 01111112 666553 22
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-chhcccCccccccCCCcc---hhhhhhhccCCc
Q 017633 139 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPD---LTTLGKIIGGGL 214 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~g~~~~~~~~~~~~d---i~s~sK~~~~G~ 214 (368)
+.+.++++.-..+++|.+..++| +.++.++++.||++|++|.+|. .| .+-.|.-...-..++ +.|+||.=-+|.
T Consensus 178 e~~g~ic~SRPtNPTGNVlTdeE-~~kldalA~~~giPliIDnAYg~PF-P~iifsd~~~~w~~NiilC~SLSK~GLPG~ 255 (417)
T COG3977 178 ESTGAICVSRPTNPTGNVLTDEE-LAKLDALARQHGIPLIIDNAYGVPF-PGIIFSDATPLWNENIILCMSLSKLGLPGS 255 (417)
T ss_pred cccceEEecCCCCCCCCcccHHH-HHHHHHHhhhcCCcEEEecccCCCC-CceecccccccCCCCEEEEeehhhcCCCCc
Confidence 46788888777777888777666 9999999999999999999993 23 332222111222233 347888744899
Q ss_pred cceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 017633 215 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK-----RLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 289 (368)
Q Consensus 215 ~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 289 (368)
|+|-++++++++..+...... -+..+...+.+.+...++ .+.++-.+..++++.+.....|+..+...+...
T Consensus 256 R~GIiIane~viqaitnmn~i---isLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~i 332 (417)
T COG3977 256 RCGIIIANEKVIQAITNMNGI---ISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLI 332 (417)
T ss_pred ceeEEEccHHHHHHHHhccce---eeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceee
Confidence 999999999999998753321 112222333333332222 111122344566666666667776655555443
Q ss_pred EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-------------cccccCCCHHHHHH
Q 017633 290 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------------GFTSLAHSSDDIQH 356 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-------------~~~~~~~~~~~i~~ 356 (368)
.-+....+.|+.+..-++ ..+++++.|+++||.+.||..+. +|+++..++++++.
T Consensus 333 HkpEGAIFlWLWf~dLPI------------tt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~ 400 (417)
T COG3977 333 HKPEGAIFLWLWFKDLPI------------TTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEK 400 (417)
T ss_pred ecCCcceeehhhhccCCC------------CHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHH
Confidence 434444466666554333 34899999999999999985332 35678889999999
Q ss_pred HHHHHHHHHhh
Q 017633 357 TITAAEKVLRQ 367 (368)
Q Consensus 357 ~~~~l~~~l~~ 367 (368)
.+.+|.+.+++
T Consensus 401 Gva~lae~ve~ 411 (417)
T COG3977 401 GVAILAEEVER 411 (417)
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 261
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.83 E-value=3.3e-18 Score=155.98 Aligned_cols=309 Identities=18% Similarity=0.183 Sum_probs=203.0
Q ss_pred cCCCcHHHHHHHHHHHHcCCCC---C---C---CChhHHHHHHHHHhhCC-CC-CeEEEeCChHHHHHHHHHHHHH-hcC
Q 017633 7 LFPSYLQVLAALGETMKKGTSF---G---A---PCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARA-FTG 74 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~---~---~---~~~~~~~l~~~l~~~~~-~~-~~v~~~~~gt~a~~~al~~~~~-~~~ 74 (368)
.|..++.|++++.+.+.+.... + . ..+...++++.++++++ +. +.+++++|+|++++.++..+.. ..+
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc
Confidence 4557889999999987763111 1 1 12456688888999988 55 7999999999999999976632 467
Q ss_pred CceEEEEcCCCCCCchhhhhh---cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+++|++.+..|++........ .|.++.....+..... |++++++.++ ++++++++..+.+
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~--------------~~~~~~~~l~---~~~~lv~~~~~~~ 150 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSL--------------DLEDLEEALN---PDTRLVSISHVEN 150 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSC--------------SHHHHHHHHH---TTESEEEEESBET
T ss_pred ccccccccccccccccccccccccchhhhccccccccchh--------------hhhhhhhhhc---cccceEEeecccc
Confidence 889999999888876433333 2333332222211111 7999999997 5899999999998
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhh--hhccCCccceeeeehHHHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~ 228 (368)
.+|...| +++|.++|+++|+++++|-+|+ .|. ...++. ..+|++++| | ++|+.++|+++++++..+.
T Consensus 151 ~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~---~g~~~id~~~--~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~ 220 (371)
T PF00266_consen 151 STGVRNP----IEEIAKLAHEYGALLVVDAAQS---AGCVPIDLDE--LGADFLVFSSHK-LGGPPGLGFLYVRPEAIER 220 (371)
T ss_dssp TTTBBSS----HHHHHHHHHHTTSEEEEE-TTT---TTTSS--TTT--TTESEEEEESTS-TTSSSTEEEEEEEHHHHHH
T ss_pred cccEEee----eceehhhhhccCCceeEechhc---cccccccccc--cccceeeecccc-cCCCCchhhheehhhhhhc
Confidence 8999999 9999999999999999999995 222 223333 345766555 9 8877789999999988888
Q ss_pred hcCCCC-cc-------c----------cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 229 VAPAGP-MY-------Q----------AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 229 ~~~~~~-~~-------~----------~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
+..... .. . ...-+.+.....++..+++.+.+.+ .++++++...+.+.+.+.+.+.+....
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g-~~~i~~~~~~l~~~~~~~l~~~~~~~~ 299 (371)
T PF00266_consen 221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIG-IERIRERIRELAEYLREALEELPGIEV 299 (371)
T ss_dssp HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred cccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccc-cccchhhhhhHHHHHHhhhhcCCceeE
Confidence 742111 00 0 0011456777777778888774322 344445555555555554444443221
Q ss_pred -----EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------------Cccc--cccCCCH
Q 017633 291 -----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGF--TSLAHSS 351 (368)
Q Consensus 291 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------------~~~~--~~~~~~~ 351 (368)
....+.++.+.+. ..+..++.+.|.++||.++.+.. ..+| +..++++
T Consensus 300 ~~~~~~~~~~~i~~~~~~--------------~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~ 365 (371)
T PF00266_consen 300 LGPDDEPRRPSIVSFNLP--------------GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTE 365 (371)
T ss_dssp SSSSCGGBGTTEEEEEET--------------TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSH
T ss_pred eeecccccccceEEEeec--------------CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCH
Confidence 2334556666652 22357899999999999998532 2334 4678899
Q ss_pred HHHHHH
Q 017633 352 DDIQHT 357 (368)
Q Consensus 352 ~~i~~~ 357 (368)
+|++++
T Consensus 366 ~dv~~l 371 (371)
T PF00266_consen 366 EDVDRL 371 (371)
T ss_dssp HHHHHH
T ss_pred HHHhhC
Confidence 999875
No 262
>PRK06460 hypothetical protein; Provisional
Probab=99.82 E-value=3.3e-19 Score=161.53 Aligned_cols=218 Identities=13% Similarity=0.121 Sum_probs=139.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
..++...+|++.++++.+....+++ +||++|+..++... ..++|.|++..+.|.+.........
T Consensus 42 ~~~p~~~~L~~~lA~l~g~~~~v~~-~sG~~ai~~~l~al--~~~Gd~Vl~~~~~~~~ty~~~~~~~------------- 105 (376)
T PRK06460 42 EANPTVLELTKKIVELENAEMGVAF-SSGMGAISTTALAL--LKPGNSVLVHRDMFGRSYRFFTDYL------------- 105 (376)
T ss_pred CCCccHHHHHHHHHHHhCCCcEEEe-CCHHHHHHHHHHHH--hCCCCEEEEecCCcCcHHHHHHHHH-------------
Confidence 3456788999999999975455555 57899999888655 3467888887766654322111110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++.++.+.+++.++ +++++++++.++|++|.+.+ +++|+++|++||+++|+||+|....
T Consensus 106 ---~~~G~~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~~-- 173 (376)
T PRK06460 106 ---KNWGVNVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTPI-- 173 (376)
T ss_pred ---HhhCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCccc--
Confidence 01112233333334444555443 46788888888888899888 8999999999999999999996321
Q ss_pred cCccccccCCCcchhhhhhhccC--CccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
......++.+.-+.|+||.++| +.++||+++++++++.+.... ...+.+.++..+..++..++.+ +...+++
T Consensus 174 -~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~---~~~g~~~~~~~a~~~l~~~~~l--~~r~~~~ 247 (376)
T PRK06460 174 -NQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMR---RTLGTSLDPHAAYLTLRGIKTL--KIRMDVI 247 (376)
T ss_pred -cCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHH---HhcCCCCCHHHHHHHHhchhhH--HHHHHHH
Confidence 1010112332234589999974 367999999998888776321 1222334555555555555544 3456677
Q ss_pred HHHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIIDA 281 (368)
Q Consensus 268 ~~~~~~l~~~l~~~ 281 (368)
.++++++.+.|++.
T Consensus 248 ~~n~~~l~~~L~~~ 261 (376)
T PRK06460 248 NRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHcC
Confidence 77888887777753
No 263
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.82 E-value=3.4e-19 Score=162.56 Aligned_cols=217 Identities=13% Similarity=0.102 Sum_probs=145.4
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++++... ..+++||+.|+..++... ..++|+|++..+.|.+..........
T Consensus 62 ~~~p~~~~Le~~lA~l~G~~~-~~~~~sG~~Ai~~~l~~~--l~~Gd~Vl~~~~~y~~~~~~~~~~~~------------ 126 (398)
T PRK07504 62 YSNPTVDMFEKRMCALEGAED-ARATASGMAAVTAAILCQ--VKAGDHVVAARALFGSCRYVVETLLP------------ 126 (398)
T ss_pred CCCchHHHHHHHHHHHhCCCe-eeEecCHHHHHHHHHHHH--hCCCCEEEEcCCchhHHHHHHHHHHh------------
Confidence 456778999999999986433 445778999998777544 35678999988877764332211100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
..+.++..++..|+++++++++ +++++++++.+++++|.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 127 ----~~G~~v~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~--- 192 (398)
T PRK07504 127 ----RYGIESTLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATP--- 192 (398)
T ss_pred ----hcCeEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCcccc---
Confidence 1111223333348999999887 47888988888888898888 999999999999999999999632
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccce-eeeehHHHHH-HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPVG-AYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~iG-~v~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.......++.+.-+.|++|.+++ |+++| +++.+++.+. .+.. .........++..++.++..++.+ ....++
T Consensus 193 ~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~---~~~~~g~~~s~~~A~~~l~~L~tl--~~R~~~ 267 (398)
T PRK07504 193 LFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD---YFRHTGPSLSPFNAWTLLKGLETL--PVRVRQ 267 (398)
T ss_pred ccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccchH--HHHHHH
Confidence 11111123333334578899984 78886 4566666543 2321 111223356788888888877766 345666
Q ss_pred HHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIID 280 (368)
Q Consensus 267 ~~~~~~~l~~~l~~ 280 (368)
..++.+.+.+.|.+
T Consensus 268 ~~~na~~la~~L~~ 281 (398)
T PRK07504 268 QTESAAAIADFLAG 281 (398)
T ss_pred HHHHHHHHHHHHHc
Confidence 77778887777765
No 264
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.82 E-value=5.7e-19 Score=161.11 Aligned_cols=217 Identities=15% Similarity=0.079 Sum_probs=146.7
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+. +++++++||+.|+..++..+ ..++|.|++....|.+........
T Consensus 67 ~~~p~~~~le~~lA~l~g~-~~al~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~~~~t~~~~~~~-------------- 129 (403)
T PRK07810 67 YGNPTVSMFEERLRLIEGA-EACFATASGMSAVFTALGAL--LGAGDRLVAARSLFGSCFVVCNEI-------------- 129 (403)
T ss_pred CCCchHHHHHHHHHHHhCC-CcEEEECChHHHHHHHHHHH--hCCCCEEEEccCCcchHHHHHHHH--------------
Confidence 4566788999999999874 46777789999999988655 356788888765554432211111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++..|+++++++++ +++++++++.++|++|.+.+ +++|+++|+++|++||+|++|+..
T Consensus 130 --~~~~G~~v~~vd~~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~--- 197 (403)
T PRK07810 130 --LPRWGVETVFVDGEDLSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP--- 197 (403)
T ss_pred --HHHcCcEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc---
Confidence 011222344445558999999987 46889999888888888888 999999999999999999999522
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccc-eeeeehHHHHH-HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~i-G~v~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.......++.+.-+.|++|.++| |.++ |+++++++.+. .++. .........++..++.++..++.+ +...++
T Consensus 198 ~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~---~~~~~g~~~s~~~a~l~l~~L~tl--~~R~~~ 272 (403)
T PRK07810 198 LLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---LMRHTGPALSAFNAWVLLKGLETL--ALRVRH 272 (403)
T ss_pred ccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 11001123433334578899985 7776 67777766543 2331 111222356888888887777765 445667
Q ss_pred HHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIID 280 (368)
Q Consensus 267 ~~~~~~~l~~~l~~ 280 (368)
..++...+.+.|++
T Consensus 273 ~~~~a~~~a~~L~~ 286 (403)
T PRK07810 273 SNASALRIAEFLEG 286 (403)
T ss_pred HHHHHHHHHHHHhc
Confidence 77777777777765
No 265
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.82 E-value=4.8e-19 Score=161.28 Aligned_cols=217 Identities=17% Similarity=0.156 Sum_probs=142.6
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+...++++.++++++. +.+++++||++|+..++..+ ..++|.||+.+..|.+........
T Consensus 59 ~~p~~~~le~~la~l~g~-~~~v~~ssG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~t~~~~~~~--------------- 120 (390)
T PRK08133 59 TNPTVTMFQERLAALEGA-EACVATASGMAAILAVVMAL--LQAGDHVVSSRSLFGSTVSLFEKI--------------- 120 (390)
T ss_pred CChHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCcchhHHHHHHHH---------------
Confidence 456788999999999864 46788899999999998655 356788888776665543211110
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
....+.++..++.+|+++++++++ +++++++++.++|++|.+.+ +++|+++|++||+++|+|++|.......
T Consensus 121 -~~~~G~~v~~vd~~d~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~~~~~ 192 (390)
T PRK08133 121 -FARFGIETTFVDLTDLDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTPALQQ 192 (390)
T ss_pred -HHHcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 011223345555558999999887 47888988888788888887 9999999999999999999985221111
Q ss_pred CccccccCCCcchhhhhhhccC-Cccce-eeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG-GLPVG-AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 268 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~-G~~iG-~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 268 (368)
. ..++.+.-+.|+||.+++ |.++| +++.+++.++.+.. .........++..+..++..++.+ ....++..
T Consensus 193 p---l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~---~~~~~g~~~~~~~a~~~l~gl~tl--~~R~~~~~ 264 (390)
T PRK08133 193 P---LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG---FLRTAGPTLSPFNAWVFLKGLETL--SLRMEAHS 264 (390)
T ss_pred c---hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH---HHHHhCCCCCHHHHHHHHcccchH--HHHHHHHH
Confidence 1 122332234578899985 67774 56677766655441 112223345666666655555433 23345566
Q ss_pred HHHHHHHHHHHHH
Q 017633 269 KITGELTQGIIDA 281 (368)
Q Consensus 269 ~~~~~l~~~l~~~ 281 (368)
+++..+.+.|++.
T Consensus 265 ~~a~~la~~L~~~ 277 (390)
T PRK08133 265 ANALALAEWLEAH 277 (390)
T ss_pred HHHHHHHHHHHhC
Confidence 6777777776653
No 266
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.82 E-value=3.9e-18 Score=154.13 Aligned_cols=276 Identities=16% Similarity=0.088 Sum_probs=161.9
Q ss_pred ChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHh-----------cCCceEEEEcCCCCCCchhhhhhcC
Q 017633 32 CLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKAG 97 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~-----------~~~~~vi~~~~~~~~~~~~~~~~~~ 97 (368)
.+.+++++++++++++ + .+.+++|+|||+|+..++..++.. .+++.+++.+...|..........+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 3566677777777776 2 357999999999999999776532 1224466666666666555544444
Q ss_pred CCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC
Q 017633 98 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 174 (368)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~ 174 (368)
.++...+......+ |++++++++++ ...+++++++...++++|.+.+ +++|+++|++||
T Consensus 117 ~~~~~v~~~~~~~~--------------d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~ 178 (345)
T cd06450 117 VKVRLVPVDEDGRM--------------DPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYD 178 (345)
T ss_pred cCeEEeeeCCCCCc--------------CHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhC
Confidence 44333222111111 89999999974 1124566665555566787766 999999999999
Q ss_pred CEEEEehhhhch-hcccCccccccCC-Ccch--hhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHH
Q 017633 175 ALLIFDEVMTGF-RLAYGGAQEYFGV-TPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 250 (368)
Q Consensus 175 ~~li~De~~~~~-~~g~~~~~~~~~~-~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 250 (368)
+++++|++|..+ ...........+. ..|. .+++|.++++.++|+++.+ ..+
T Consensus 179 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------------------~~~ 233 (345)
T cd06450 179 LWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-------------------------ALK 233 (345)
T ss_pred CeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------------------HHH
Confidence 999999999654 2111100000111 2353 3688988887899988666 222
Q ss_pred HHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 251 GIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 251 ~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
..++++.+..+ +..++..++++++++.|.+ .+ .........+++.+.+.... .......++.+
T Consensus 234 ~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~iv~f~~~~~~---------~~~~~~~~i~~ 300 (345)
T cd06450 234 LWATLRRFGRDGYGEHIDRIVDLAKYLAELIRA----DPGFELLGEPNLSLVCFRLKPSV---------KLDELNYDLSD 300 (345)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCceeEEEEEECCcc---------hhhHHHHHHHH
Confidence 23334433332 2344444555555555444 32 21111123445555442100 00234578999
Q ss_pred HHHHcCeeecCCC----CCcccc--ccC-CCHHHHHHHHHHHHH
Q 017633 327 GMLEEGVYFAPSQ----FEAGFT--SLA-HSSDDIQHTITAAEK 363 (368)
Q Consensus 327 ~l~~~Gi~~~~~~----~~~~~~--~~~-~~~~~i~~~~~~l~~ 363 (368)
.|.++|+.+.+.. ...+|+ ... ++++|++++++.|++
T Consensus 301 ~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 9999965544321 223444 333 499999999999976
No 267
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=7.5e-19 Score=160.04 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=149.4
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+..+...++++.++++.+. +..++++||++|+..++... ..++|.|++..+.|++........
T Consensus 61 ~~~p~~~~le~~lA~l~g~-~~~i~~ssG~~Ai~~~l~al--l~~GD~Vi~~~~~y~~~~~~~~~~-------------- 123 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEGA-EAATAFSTGMAAISNTLYTF--LKPGDRVVSIKDTYGGTNKIFTEF-------------- 123 (398)
T ss_pred CCChHHHHHHHHHHHHhCC-CeEEEeCChHHHHHHHHHHh--cCCCCEEEEcCCchHHHHHHHHHH--------------
Confidence 4667789999999999875 45677778999999988655 346789999988887642211110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|.++|++||+++|+|++|......
T Consensus 124 --~~~~Gi~v~~vd~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~~~ 194 (398)
T PRK08249 124 --LPRMGVDVTLCETGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPINQ 194 (398)
T ss_pred --HhhCCeEEEEcCCCCHHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccccC
Confidence 001122233334448999999997 46888888877778888888 999999999999999999999643111
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccc-eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~i-G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. . .++.+..+.|+||.++| |-++ |++++++++++.++.. ........++..++.++..++.+ +...++.
T Consensus 195 ~~--l-~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~---~~~~g~~~s~~~a~l~l~~l~tL--~~R~~~~ 266 (398)
T PRK08249 195 NP--L-ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY---REINGATMDPMSAYLILRGMKTL--KLRVRQQ 266 (398)
T ss_pred Cc--h-hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhCcchH--HHHHHHH
Confidence 11 1 12333334688899985 5555 6667788887776532 22234467788888877777766 3345677
Q ss_pred HHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIID 280 (368)
Q Consensus 268 ~~~~~~l~~~l~~ 280 (368)
.++++.+.+.|++
T Consensus 267 ~~na~~la~~L~~ 279 (398)
T PRK08249 267 QESAMALAKYLQT 279 (398)
T ss_pred HHHHHHHHHHHHc
Confidence 7777777777775
No 268
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.82 E-value=1e-18 Score=158.51 Aligned_cols=217 Identities=14% Similarity=0.140 Sum_probs=150.1
Q ss_pred CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 29 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.++++...+|++.++++.+. +++++++||++|+..++... ..++|.|++..+.|.+............
T Consensus 47 R~~~p~~~~le~~lA~l~g~-~~v~~~~gg~~Ai~~~l~al--l~~GD~Vl~~~p~y~~~~~~~~~~~~~~--------- 114 (382)
T TIGR02080 47 RSGNPTRDLLQQALAELEGG-AGAVVTNTGMSAIHLVTTAL--LGPDDLLVAPHDCYGGTYRLLNALAKKG--------- 114 (382)
T ss_pred CCCCchHHHHHHHHHHHhCC-CcEEEEcCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhhc---------
Confidence 35677789999999998864 67999999999999999766 3577899998888876543322221111
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 187 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~ 187 (368)
+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|+++|+++|+++|+||+|... .
T Consensus 115 -------~~~v~~~d~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~ 180 (382)
T TIGR02080 115 -------CFRVLFVDQGDEQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPAL 180 (382)
T ss_pred -------CeEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 00111122237899999887 36788888877777888888 999999999999999999999633 1
Q ss_pred cccCccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 188 LAYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
. .. . .++.+.-+.|+||.++| +++.|++++ ++++.+.+.. .....+...+++.+..++..++.+. ...
T Consensus 181 ~-~p--l-~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~---~~~~~g~~~sp~~a~l~lr~l~tl~--~R~ 251 (382)
T TIGR02080 181 Q-NP--L-ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW---WANNLGVTGGAFDSYLTLRGLRTLV--ARM 251 (382)
T ss_pred C-Cc--h-hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH---HHHccCCCCCHHHHHHHHcccchHH--HHH
Confidence 1 11 1 12333334588999984 578999866 5667666652 2233344678888888777776552 235
Q ss_pred HHHHHHHHHHHHHHHH
Q 017633 265 EYLNKITGELTQGIID 280 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~ 280 (368)
++..+++..+.+.|++
T Consensus 252 ~~~~~na~~~a~~L~~ 267 (382)
T TIGR02080 252 RLQQRNAQAIVEYLQT 267 (382)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5666777777777765
No 269
>PLN02651 cysteine desulfurase
Probab=99.82 E-value=2.9e-18 Score=155.80 Aligned_cols=247 Identities=17% Similarity=0.104 Sum_probs=156.3
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCC----C-----CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH--hcC
Q 017633 7 LFPSYLQVLAALGETMKKGTSFG----A-----PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA--FTG 74 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~~----~-----~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~--~~~ 74 (368)
.+..++++++++.+++....... . ..+..+++++.++++++ +.+.+++++|+|+++..++..+.. ..+
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~ 87 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDK 87 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCC
Confidence 34567899999988775421110 0 12446788899999997 678999999999999998865532 245
Q ss_pred CceEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
+++|++....++......... .|..+....... .+.. |+++++++++ ++++++++...++.
T Consensus 88 g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~-------------d~~~l~~~i~---~~t~lv~v~~~~n~ 150 (364)
T PLN02651 88 KKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS-DGLV-------------DLDELAAAIR---PDTALVSVMAVNNE 150 (364)
T ss_pred CCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCcC-------------CHHHHHHhcC---CCcEEEEEECCCCC
Confidence 677777665554432222222 222222211111 1111 7899999997 46788888888888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhh--hhhccCCccceeeeehHHHHHHh
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~~~~~~~~~ 229 (368)
+|.+.+ +++|.++|++||+++++|.+|+ .|. .+..+.++ +|++++ -|. +|+.++|+++++++....+
T Consensus 151 tG~~~~----l~~I~~~~~~~g~~~~vD~a~~---~g~~~~~~~~~~--~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l 220 (364)
T PLN02651 151 IGVIQP----VEEIGELCREKKVLFHTDAAQA---VGKIPVDVDDLG--VDLMSISGHKI-YGPKGVGALYVRRRPRVRL 220 (364)
T ss_pred ceeccc----HHHHHHHHHHcCCEEEEEcchh---hCCcccCcccCC--CCEEEechhhh-CCCCceEEEEEcCCCCCCC
Confidence 999988 9999999999999999999996 222 23334444 476654 495 5556799998887665544
Q ss_pred cCCC----CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Q 017633 230 APAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 282 (368)
Q Consensus 230 ~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~ 282 (368)
...- .....-..+.|..+..++.++++.+.+ . .+.+.++.+.+.+.+.+.+
T Consensus 221 ~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~-~~~i~~~~~~l~~~l~~~l 275 (364)
T PLN02651 221 EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-E-MDYDEKHMKALRERLLNGL 275 (364)
T ss_pred CccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-h-HHHHHHHHHHHHHHHHHHH
Confidence 3210 000011225677778888888888754 2 2444555555555554443
No 270
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.81 E-value=9.3e-19 Score=159.34 Aligned_cols=220 Identities=13% Similarity=0.063 Sum_probs=146.2
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+.. ..++++||++|+..++... ..+++.|++..+.|.+........
T Consensus 56 ~~~p~~~~le~~lA~l~g~~-~av~~~sG~~Ai~~~l~al--~~~Gd~Vi~~~~~y~~t~~~~~~~-------------- 118 (391)
T TIGR01328 56 LGNPTVSNLEGRIAFLEGTE-AAVATSSGMGAIAATLLTI--LKAGDHLISDECLYGCTFALLEHA-------------- 118 (391)
T ss_pred CCCchHHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHH--hCCCCEEEEecCcchHHHHHHHHH--------------
Confidence 45677889999999999743 4677888999999888655 346788888776665432211111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++ +++++++++.++|++|.+.+ +++|.++|+++|+++|+|++|.....+
T Consensus 119 --~~~~G~~~~~vd~~d~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~~~~ 189 (391)
T TIGR01328 119 --LTKFGIQVDFINMAIPEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATPMLT 189 (391)
T ss_pred --HhcCCeEEEEECCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchhccC
Confidence 011233445555568999999887 46888888888888888888 999999999999999999999522111
Q ss_pred cCccccccCCCcchhhhhhhccC-Ccc-ceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~-iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. . ..+.+.-+.|+||.+++ |.+ .|+++.++++++.++..... .......++..++.++..++.+ ....++.
T Consensus 190 ~~--~-~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~-~~~g~~l~~~~a~l~l~~L~tl--~~r~~~~ 263 (391)
T TIGR01328 190 NP--V-ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIK-DMTGSVISPFDAWLILRGLKTL--NIRMKRH 263 (391)
T ss_pred Cc--h-hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHH-hCCCCCCCcHHHHHHHhCcCcH--HHHHHHH
Confidence 11 1 12222234578899984 655 56777888887776631111 1112345666676666655544 3345667
Q ss_pred HHHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIIDA 281 (368)
Q Consensus 268 ~~~~~~l~~~l~~~ 281 (368)
.++.+++.+.|++.
T Consensus 264 ~~na~~la~~L~~~ 277 (391)
T TIGR01328 264 SENAMKVAEYLKSH 277 (391)
T ss_pred HHHHHHHHHHHHhC
Confidence 77778887777663
No 271
>PRK14012 cysteine desulfurase; Provisional
Probab=99.81 E-value=8.2e-18 Score=154.96 Aligned_cols=191 Identities=18% Similarity=0.156 Sum_probs=127.0
Q ss_pred CCCcHHHHHHHHHHHH--cCC-CCC--C------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH--hc
Q 017633 8 FPSYLQVLAALGETMK--KGT-SFG--A------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA--FT 73 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~--~~~-~~~--~------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~--~~ 73 (368)
+..++.+++++.+++. ... ... . ..+...++++.++++++ +.+.+++++|||+++..++..+.. ..
T Consensus 13 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~ 92 (404)
T PRK14012 13 TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQK 92 (404)
T ss_pred CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcC
Confidence 4467789999988875 211 110 0 01345678889999998 668899999999999999865532 24
Q ss_pred CCceEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+++.|++.+..|+......... .|..+....... ++.. |+++++++++ ++++++++...++
T Consensus 93 ~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~~-------------d~~~l~~~i~---~~t~lv~~~~~~n 155 (404)
T PRK14012 93 KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS-NGII-------------DLEKLEAAMR---DDTILVSIMHVNN 155 (404)
T ss_pred CCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC-CCcC-------------CHHHHHHhcC---CCCEEEEEECcCC
Confidence 5677888776665443332222 233322221111 1111 7999999997 4678888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhh--hhccCCccceeeeehHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~ 225 (368)
++|.+.+ +++|.++|++||+++|+|++|+ .|.. .... ...+|++++| |.++++ ++|+++++++.
T Consensus 156 ~tG~~~~----~~~I~~la~~~g~~vivD~a~~---~g~~~~~~~--~~~~D~~~~s~~K~~gp~-g~G~l~~~~~~ 222 (404)
T PRK14012 156 EIGVIQD----IAAIGEICRERGIIFHVDAAQS---VGKVPIDLS--KLKVDLMSFSAHKIYGPK-GIGALYVRRKP 222 (404)
T ss_pred Cccchhh----HHHHHHHHHHcCCEEEEEcchh---cCCcccCcc--cCCCCEEEEehhhccCCC-ceEEEEEecCC
Confidence 8898888 9999999999999999999996 2221 1222 2346766554 977643 78988776653
No 272
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.81 E-value=1.1e-17 Score=151.49 Aligned_cols=287 Identities=16% Similarity=0.090 Sum_probs=168.1
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCC-C--CC------ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh--c
Q 017633 6 ILFPSYLQVLAALGETMKKGTSF-G--AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--T 73 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~-~--~~------~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--~ 73 (368)
..+..++.+++++.+++...... + .. .+..+++++.++++++ +.+++++++|++++++.++...... .
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~ 85 (353)
T TIGR03235 6 ATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQ 85 (353)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccc
Confidence 34567889999999887542111 1 11 1346788999999998 6789999999999999998665432 1
Q ss_pred CC-ceEEEEcCCCCCCch-hhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 74 GR-ERIIKFEGCYHGHAD-PFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 74 ~~-~~vi~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
++ +.|++.. ..|.+.. ..... .|.++...+.... +. .|++++++.++ ++++++++...
T Consensus 86 ~g~~~vi~~~-~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~-------------~d~~~l~~~l~---~~~~lv~~~~~ 147 (353)
T TIGR03235 86 KGKKHIITSA-IEHPAVLEPIRALERNGFTVTYLPVDES-GR-------------IDVDELADAIR---PDTLLVSIMHV 147 (353)
T ss_pred CCCCeeeEcc-cccHHHHHHHHHHHhcCCEEEEEccCCC-Cc-------------CCHHHHHHhCC---CCCEEEEEEcc
Confidence 23 4555544 3343322 22111 2322222111111 11 17899999886 36788888888
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhh--hhhhccCCccceeeeehHHHH
Q 017633 150 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s--~sK~~~~G~~iG~v~~~~~~~ 226 (368)
++++|.+.+ +++|.++|++||+++++|++|+ .|. .+..+.+ .+|+++ ..|.++ ..++|+++++++..
T Consensus 148 ~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~---~g~~~~~~~~~--~~D~~~~s~~K~~g-p~g~g~l~~~~~~~ 217 (353)
T TIGR03235 148 NNETGSIQP----IREIAEVLEAHEAFFHVDAAQV---VGKITVDLSAD--RIDLISCSGHKIYG-PKGIGALVIRKRGK 217 (353)
T ss_pred cCCceeccC----HHHHHHHHHHcCCEEEEEchhh---cCCcccccccc--CCCEEEeehhhcCC-CCceEEEEEccCcc
Confidence 888999988 9999999999999999999995 222 2223333 346654 449764 33589988887643
Q ss_pred HH--hcC---C-CCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE---eecc
Q 017633 227 EM--VAP---A-GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG---GYIS 295 (368)
Q Consensus 227 ~~--~~~---~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~ 295 (368)
.. +.. . .........+.+.....+..++++.+.. +...++++++.+++++.|++ .++.... ....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~----~g~~~~~~~~~~~~ 293 (353)
T TIGR03235 218 PKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT----LGVKLNGDPAETIP 293 (353)
T ss_pred cccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCeEEeCCcccccC
Confidence 22 111 0 0000011224566666777778776642 22344555555555555443 2321111 1112
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ 339 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~ 339 (368)
.++.+.+ +..+..++.+.|. +||.++++.
T Consensus 294 ~i~~~~~--------------~~~~~~~v~~~L~-~~i~v~~g~ 322 (353)
T TIGR03235 294 HILNFSI--------------DGVNSEALIVNLR-ADAAVSTGS 322 (353)
T ss_pred CEEEEEe--------------CCcCHHHHHHHHh-CCeEEEchh
Confidence 2333332 2223467888885 489998874
No 273
>PRK07049 methionine gamma-lyase; Validated
Probab=99.81 E-value=5e-18 Score=155.97 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=146.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh---hcCCCccccCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLP 106 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 106 (368)
++++....|++.++++.+. +++++++||++|+..++..+. .++|.|++..+.|.++...... ..|.+... ++
T Consensus 80 ~~~Pt~~~Le~~lA~leg~-~~~iv~~sG~~Ai~~~l~al~--~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~--~~ 154 (427)
T PRK07049 80 FNHPNSEIVEDRLAVYEGA-ESAALFSSGMSAIATTLLAFV--RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVG--FA 154 (427)
T ss_pred CCCcCHHHHHHHHHHHhCC-CcEEEEccHHHHHHHHHHHHh--CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEE--Ee
Confidence 5667788999999999864 468888899999988886552 4678999999888886443221 12221111 11
Q ss_pred CCCCCCCCCCCcccccCCCCHHHHHHHHHcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH------hCCEEE
Q 017633 107 DSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLI 178 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~------~~~~li 178 (368)
...|.+++++.+.+. .+++++++++..+|++|.+.+ ++++.+++++ +++++|
T Consensus 155 ----------------~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vv 214 (427)
T PRK07049 155 ----------------DGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIA 214 (427)
T ss_pred ----------------CCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEE
Confidence 112677888777531 136888888888788888877 5666666655 799999
Q ss_pred Eehhhhch-hcccCccccccCCCcchhhhhhhcc--CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHH
Q 017633 179 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG--GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 255 (368)
Q Consensus 179 ~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~--~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l 255 (368)
+||+|.+. ... . . ..+...-+.|+||.++ +|+|+||+++++++++.+.. .......+.++..+.++...+
T Consensus 215 vDety~~~~~~~-p--l-~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~---~~~~~g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 215 CDNTLLGPVFQK-P--L-EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRA---LRSAIGTQLDPHSCWMLGRSL 287 (427)
T ss_pred EECCccccccCC-c--c-ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHcCC
Confidence 99998643 211 1 1 1233333458999999 57999999999888887763 222223457888888877777
Q ss_pred HHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 256 KRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
+.+ ....++..++++.+.+.|++.
T Consensus 288 ~tl--~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 288 ETL--VLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred ChH--HHHHHHHHHHHHHHHHHHHhC
Confidence 644 233456677777777777653
No 274
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=5.6e-18 Score=153.73 Aligned_cols=218 Identities=15% Similarity=0.145 Sum_probs=149.7
Q ss_pred CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 29 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.++++...+|+++++++.+. +.+++++||++|+..++... ..++|.|++.++.|++.............
T Consensus 48 R~~~pt~~~L~~~lA~l~g~-~~~i~~~sg~~Ai~~~l~~l--~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g-------- 116 (386)
T PRK08045 48 RRGNPTRDVVQRALAELEGG-AGAVLTNTGMSAIHLVTTVF--LKPGDLLVAPHDCYGGSYRLFDSLAKRGC-------- 116 (386)
T ss_pred CCCCccHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhhCC--------
Confidence 35677889999999999874 46999999999999998755 35778999998888765433222211100
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 117 --------i~v~~vd~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~-- 179 (386)
T PRK08045 117 --------YRVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSP-- 179 (386)
T ss_pred --------eEEEEeCCCCHHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcc--
Confidence 0011111227899999886 46788888877778888888 999999999999999999999633
Q ss_pred ccCccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.......++.+.-+.|++|.++| +...|++++ ++++.+.+.. .....+...+++.+..+..+++.+ +-..+
T Consensus 180 -~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~---~~~~~g~~~~p~~~~l~~rgl~tl--~~R~~ 253 (386)
T PRK08045 180 -ALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW---WANNIGVTGGAFDSYLLLRGLRTL--VPRME 253 (386)
T ss_pred -ccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhccH--HHHHH
Confidence 11111122333234578999984 467898866 5667666652 222334467888888888887755 33456
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIID 280 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~ 280 (368)
+..+++..+.+.|++
T Consensus 254 ~~~~na~~la~~L~~ 268 (386)
T PRK08045 254 LAQRNAQAIVKYLQT 268 (386)
T ss_pred HHHHHHHHHHHHHHc
Confidence 677777777777765
No 275
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.81 E-value=9.9e-19 Score=158.94 Aligned_cols=215 Identities=16% Similarity=0.155 Sum_probs=143.3
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++++. +.+++++||++|+..++... ..++++|++..+.|.+. ...+...
T Consensus 51 ~~~p~~~~le~~la~l~g~-~~~~~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~~~~t-~~~~~~~------------- 113 (380)
T TIGR01325 51 YANPTVAAFEERIAALEGA-ERAVATATGMSAIQAALMTL--LQAGDHVVASRSLFGST-VGFISEI------------- 113 (380)
T ss_pred CCCchHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEecCCcchH-HHHHHHH-------------
Confidence 4567789999999998864 56788899999999999655 24577888866544332 2222110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++ ++++++++++++++.|.+.+ +++|.++|+++|+++|+|++|+....
T Consensus 114 --~~~~g~~v~~v~~~d~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~~- 183 (380)
T TIGR01325 114 --LPRFGIEVSFVDPTDLNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPVL- 183 (380)
T ss_pred --HHHhCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 001122344455558899988886 46788888888887888888 99999999999999999999963311
Q ss_pred cCccccccCCCcch--hhhhhhccC-Cccc-eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 190 YGGAQEYFGVTPDL--TTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 190 ~~~~~~~~~~~~di--~s~sK~~~~-G~~i-G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.......+|+ .|++|.++| |.++ |++++++++++.+... ........++..+..++..++.+. ...+
T Consensus 184 ----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~---~~~~g~~~~p~~a~~~l~~l~tl~--~r~~ 254 (380)
T TIGR01325 184 ----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVY---LRHTGPAMSPFNAWVLLKGLETLS--LRMQ 254 (380)
T ss_pred ----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHH---HHhhCCCCCHHHHHHHHhccCcHH--HHHH
Confidence 1112223455 478899995 5666 6677788777766521 111222445666666666655542 2456
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIID 280 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~ 280 (368)
+..++++.+.+.|++
T Consensus 255 ~~~~~a~~la~~L~~ 269 (380)
T TIGR01325 255 KQFDSALAIAEWLQA 269 (380)
T ss_pred HHHHHHHHHHHHHHc
Confidence 677777777777765
No 276
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=2e-18 Score=157.54 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=145.0
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+..+. ++++||++|+..++..+ ..++|+|++..+.|++..........
T Consensus 57 ~~~p~~~~Le~~lA~l~g~~~~-v~~~sG~~Ai~~~l~al--l~pGD~Vvv~~p~Y~~t~~~~~~~~~------------ 121 (405)
T PRK08776 57 SGNPTRDLLGEALAELEGGAGG-VITATGMGAINLVLNAL--LQPGDTLVVPHDAYGGSWRLFNALAK------------ 121 (405)
T ss_pred CCChHHHHHHHHHHHHhCCCce-EEEcCHHHHHHHHHHHH--hCCCCEEEEccCCchHHHHHHHHHHH------------
Confidence 4556678999999998876444 56667999998888655 35788999988888764322111100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
..+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|+++|++||+++|+||+|..- .
T Consensus 122 ----~~g~~v~~v~~~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~--~ 188 (405)
T PRK08776 122 ----KGHFALITADLTDPRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSP--A 188 (405)
T ss_pred ----hcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccc--c
Confidence 0112233344448899999886 36777777777677788776 999999999999999999999521 0
Q ss_pred cCccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
..... .++.+.-+.|.+|.++| +...|+++. ++++.+.+.. ......+..+++.+......++.+ +.+.++
T Consensus 189 ~~~pl-~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~---~~~~~g~~~s~~~a~l~~~gl~tl--~~r~~~ 262 (405)
T PRK08776 189 LQKPL-EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW---WANALGLTGSPFDAFLTLRGLRTL--DARLRV 262 (405)
T ss_pred cCCcc-cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhCcH--HHHHHH
Confidence 01111 13333334577899984 467888866 5667666642 112223356888888877777655 345667
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIIDA 281 (368)
Q Consensus 267 ~~~~~~~l~~~l~~~ 281 (368)
..+++..+.+.|++.
T Consensus 263 ~~~na~~la~~L~~~ 277 (405)
T PRK08776 263 HQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHcC
Confidence 777777777777653
No 277
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=2.2e-17 Score=150.26 Aligned_cols=310 Identities=16% Similarity=0.091 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
++-++++.+.+..... ++.+...+|++.++++++. +.+++++|||+|+..++..+ ...++|+||+.+.+|.+....
T Consensus 14 ~~e~~~~~~~l~~~~~--~~g~~~~~le~~la~~~g~-~~~v~~~sgt~al~lal~al-~~~~Gd~Viv~~~~~~~~~~~ 89 (379)
T PRK11658 14 DEELAAVKEVLRSGWI--TTGPKNQALEQAFCQLTGN-QHAIAVSSATAGMHITLMAL-GIGPGDEVITPSLTWVSTLNM 89 (379)
T ss_pred HHHHHHHHHHHHcCCc--cCCHhHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHHc-CCCCCCEEEECCCcHHHHHHH
Confidence 4557777777765433 2345678999999999864 36788889999999999755 124678999988888776433
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
+...|..+............ |+++++++++ +++++++ |++ .+|...+ +++|+++|+
T Consensus 90 -~~~~G~~~v~vd~~~~~~~~-------------d~~~l~~~i~---~~tkav~--~~~-~~G~~~d----~~~i~~~a~ 145 (379)
T PRK11658 90 -IVLLGATPVMVDVDRDTLMV-------------TPEAIEAAIT---PRTKAII--PVH-YAGAPAD----LDAIRAIGE 145 (379)
T ss_pred -HHHcCCEEEEEecCCCcCCc-------------CHHHHHHhcc---cCCeEEE--EeC-CCCCcCC----HHHHHHHHH
Confidence 33334433222221111111 7999999987 3677766 333 2566666 999999999
Q ss_pred HhCCEEEEehhhh-ch-hcccCccccccCCCcchhhhh--hhccCCccceeeee-hHHHHHHhcC---CCCc--------
Q 017633 172 ENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG-RRDIMEMVAP---AGPM-------- 235 (368)
Q Consensus 172 ~~~~~li~De~~~-~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~-~~~~~~~~~~---~~~~-------- 235 (368)
+||+++|+|++|+ |. ..|.. ...++ .++.||+ |.+++ .+.|+++. ++++.+.++. .+..
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~~Sf~~~K~l~~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGRH--IGARG--TAIFSFHAIKNITC-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred HcCCeEEEECCCccCCeECCee--cCCCC--CEEEeCCCCCcCcc-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhc
Confidence 9999999999996 33 22211 12233 3677777 65644 46777766 4666655432 1100
Q ss_pred ----------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEE-eeccceEEEEee
Q 017633 236 ----------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICG-GYISGMFGFFFT 303 (368)
Q Consensus 236 ----------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~-~~~~~~~~~~~~ 303 (368)
..+.++..+.+.++.++..++.+ +++.++.+++.+++++.|.++... ...+... ......+.+.+.
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEEC
Confidence 01223344556666666666544 334555566666666666543100 0000000 000112222221
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-------------------------ccc--ccCCCHHHHHH
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------------------------GFT--SLAHSSDDIQH 356 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-------------------------~~~--~~~~~~~~i~~ 356 (368)
.. ....+..++.+.|.++||.++....+. +.+ ...++++|+++
T Consensus 299 ~~----------~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~ 368 (379)
T PRK11658 299 EE----------RCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDR 368 (379)
T ss_pred Cc----------cccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHH
Confidence 10 011235789999999998876321110 122 24579999999
Q ss_pred HHHHHHHHHh
Q 017633 357 TITAAEKVLR 366 (368)
Q Consensus 357 ~~~~l~~~l~ 366 (368)
.++.|++++.
T Consensus 369 i~~~i~~~~~ 378 (379)
T PRK11658 369 VITALQQIAG 378 (379)
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 278
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.80 E-value=8.6e-18 Score=152.26 Aligned_cols=307 Identities=17% Similarity=0.122 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
.+-++++.+.+... .+........++.++++++++ ...++.++|||.|+.++++++ ...+++.||+..-++.....+
T Consensus 5 ~e~~~~v~~~l~s~-~~~~~g~~~~~fE~~~a~~~g-~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~~~a 81 (363)
T PF01041_consen 5 EEEIDAVLEVLRSG-WLSTYGPYVEEFEKEFAEYFG-VKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPATASA 81 (363)
T ss_dssp HHHHHHHHHHHHHT-CCSSSSHHHHHHHHHHHHHHT-SSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THHHHH
T ss_pred HHHHHHHHHHHHhC-CccCCCHHHHHHHHHHHHHhC-CCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHHHHH
Confidence 34566677777664 222225778899999999885 567888889999999999875 456789999988877776555
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
....+..++..+--+....+ |+++++++++ ++++++++.+..+ ...+ +++|.++|+
T Consensus 82 i~~~G~~pv~~Di~~~~~~i--------------d~~~~~~~i~---~~t~ai~~~h~~G---~~~d----~~~i~~~~~ 137 (363)
T PF01041_consen 82 ILWAGAEPVFVDIDPETLNI--------------DPEALEKAIT---PKTKAILVVHLFG---NPAD----MDAIRAIAR 137 (363)
T ss_dssp HHHTT-EEEEE-BETTTSSB---------------HHHHHHHHH---TTEEEEEEE-GGG---B-------HHHHHHHHH
T ss_pred HHHhccEEEEEeccCCcCCc--------------CHHHHHHHhc---cCccEEEEecCCC---Cccc----HHHHHHHHH
Confidence 55554444433322333333 8999999999 5788888877764 3445 999999999
Q ss_pred HhCCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccCCccceeeeeh-HHHHHHh---cCCCCc-------c
Q 017633 172 ENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMV---APAGPM-------Y 236 (368)
Q Consensus 172 ~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~G~~iG~v~~~-~~~~~~~---~~~~~~-------~ 236 (368)
+||++||+|.+|+- |..+.-...|..-|+.+|| |.+++|- .|+++.+ +++.+.+ +..+.. .
T Consensus 138 ~~~i~lIeD~a~a~---g~~~~g~~~G~~gd~~~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (363)
T PF01041_consen 138 KHGIPLIEDAAQAF---GARYKGRPVGSFGDIAIFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYR 213 (363)
T ss_dssp HTT-EEEEE-TTTT---T-EETTEETTSSSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTE
T ss_pred HcCCcEEEcccccc---CceeCCEeccCCCCceEecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccCcCcccccccc
Confidence 99999999999962 2211112233333554443 9997553 4777664 5555544 322211 0
Q ss_pred ----ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh--cCCceEEe-eccceEEEEeecCCCcc
Q 017633 237 ----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK--AGHAICGG-YISGMFGFFFTEGPVYN 309 (368)
Q Consensus 237 ----~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 309 (368)
.+..+..+.+.++.++..|+.+ +...++.+++.+.+.+.|.+.... .+.+.... .....+.+.+...
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~---- 287 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE---- 287 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC----
T ss_pred ccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc----
Confidence 2345677888888888888755 334555556666666665553210 01110100 1122223333210
Q ss_pred cchhcccccHHHHHHHHHHHHcCeeecCCCC-Ccc---------------------------cc--ccCCCHHHHHHHHH
Q 017633 310 FEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAG---------------------------FT--SLAHSSDDIQHTIT 359 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~---------------------------~~--~~~~~~~~i~~~~~ 359 (368)
......++.+.|.++||.+.+... +.. .+ ...++++|++++++
T Consensus 288 -------~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~ 360 (363)
T PF01041_consen 288 -------ALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAE 360 (363)
T ss_dssp -------GCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHH
T ss_pred -------ccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhh
Confidence 002357899999999999987652 210 11 25678999999998
Q ss_pred HHH
Q 017633 360 AAE 362 (368)
Q Consensus 360 ~l~ 362 (368)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 875
No 279
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=2.9e-18 Score=154.97 Aligned_cols=290 Identities=10% Similarity=0.049 Sum_probs=181.8
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh-hcCCCccccCCCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV-KAGSGVATLGLPDSPG 110 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 110 (368)
++....|++.++++.+. +.+++++||++|+..++... ..++|.|++.++.|++.....-. ....
T Consensus 49 nPt~~~lE~~lA~l~g~-~~~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~~~~~~~------------ 113 (377)
T TIGR01324 49 TLTHFALQDAMCELEGG-AGCYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCDIVLKRM------------ 113 (377)
T ss_pred CccHHHHHHHHHHHhCC-CcEEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHHHHHHhc------------
Confidence 45678999999998864 57788889999999999755 35788999988888764321100 0000
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
+.++..++..+.+++++.++ +++++++++.+.|++|...+ +++|+++|++||+++|+|++|+ .|.
T Consensus 114 -----gi~v~~~d~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a---~g~ 178 (377)
T TIGR01324 114 -----GVDITYYDPLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA---AGL 178 (377)
T ss_pred -----CcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc---ccc
Confidence 11222222224478888886 57889999988888888777 9999999999999999999995 222
Q ss_pred CccccccCCCcchhhhhhhccC--CccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 268 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 268 (368)
.+....++.+.-+.|.+|.++| +...|+++++++.++.+.. .........++..+...+..++.+ .-..++..
T Consensus 179 ~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~---~~~~~G~~l~p~~a~~~~rgl~tl--~~R~~~~~ 253 (377)
T TIGR01324 179 LFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE---HSYLMGQMVDADDAYTTLRGLRTL--GVRLKQHQ 253 (377)
T ss_pred ccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHH---HHHHhCCCCCHHHHHHHHhhhhhH--HHHHHHHH
Confidence 2111223333233467899984 3678888888877666552 112223355777777776676655 33456667
Q ss_pred HHHHHHHHHHHHHHH--h--cC-Cc---------eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCee
Q 017633 269 KITGELTQGIIDAGK--K--AG-HA---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 334 (368)
Q Consensus 269 ~~~~~l~~~l~~~~~--~--~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 334 (368)
+++..+.+.|++... + ++ +. ....+.+.++.+.+... ......+|.+.|.--++.
T Consensus 254 ~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~-----------~~~~~~~~~~~l~~~~~~ 322 (377)
T TIGR01324 254 ESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL-----------TQKQVHAFLDHLQLFGLG 322 (377)
T ss_pred HHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC-----------CHHHHHHHHHhCCcceEe
Confidence 777777777766311 0 01 00 01224567777777320 123345677777544444
Q ss_pred ecCCCCCc---------------------cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 335 FAPSQFEA---------------------GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 335 ~~~~~~~~---------------------~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++-|+... -.+++.+.-|+.+.+++-|+++++.
T Consensus 323 ~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 323 YSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLENVDDLKADLKAGFEA 376 (377)
T ss_pred ccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 43332111 0123445557888888888888865
No 280
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=4.9e-18 Score=137.30 Aligned_cols=287 Identities=17% Similarity=0.196 Sum_probs=174.4
Q ss_pred HHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCC
Q 017633 37 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 115 (368)
Q Consensus 37 ~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (368)
+++..+++--+ .++.+++..|..+.+...++.++. +++++|+..+++|.=+...+... +
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~-PGkeKIl~cPPtysMY~v~A~iN-d------------------ 132 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD-PGKEKILDCPPTYSMYVVDAAIN-D------------------ 132 (375)
T ss_pred hhhhhcccCCCCCccceEEecCcHHHHHHHHhheec-CCccceeecCCcceeEEEEeecC-C------------------
Confidence 33434433333 478999999888888888888765 57789999999886543322221 1
Q ss_pred CCcccccCCC-----CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc
Q 017633 116 TYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 189 (368)
Q Consensus 116 ~~~~~~~~~~-----d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g 189 (368)
..++.+|.+ |.+++.+.+... +.++.+++.+..+++|....+.+ +++|.+.-. +.++++||+|.+| ..+
T Consensus 133 -~eVvkvpl~pdF~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~ik~~d-i~KiLe~p~--nglVVvDEAYidFsg~~ 207 (375)
T KOG0633|consen 133 -AEVVKVPLNPDFSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSIIKEDD-ILKILEMPD--NGLVVVDEAYIDFSGVE 207 (375)
T ss_pred -ceEEEecCCCCccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccccHHH-HHHHHhCCC--CcEEEEeeeeEeecccc
Confidence 122222221 788888888743 57888877777777787777444 666666554 8999999999988 433
Q ss_pred c-CccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 Y-GGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~-~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
+ .-....+..-..+.||||.|| +|+|+|+...+..+++.+...+ ..+..+..+..+|+++++-- .....+.+
T Consensus 208 S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K-----aPYNiS~~~s~~AL~Als~~-n~kkme~~ 281 (375)
T KOG0633|consen 208 SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK-----APYNISVAGSVAALAALSDS-NGKKMEDV 281 (375)
T ss_pred ccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc-----CCccccchhHHHHHHhcCcc-cchHHHHH
Confidence 2 111222222233679999999 9999999999999999887544 44455666666666666511 11122233
Q ss_pred HHHHHHHHHHHHHHHHhcCCceE--EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCCCc--
Q 017633 268 NKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEA-- 342 (368)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~-- 342 (368)
+...-+-|.+|-+.+...++... .+...+|+.+++... +...++.+...+. +.||+++..+.-.
T Consensus 282 rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~-----------~n~~akkly~q~at~~gVvVRfrgse~~c 350 (375)
T KOG0633|consen 282 RDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGG-----------DNGMAKKLYKQDATKMGVVVRFRGSEEGC 350 (375)
T ss_pred HHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCC-----------CcHHHHHHHHHHHHhcceEEEEcCCcccc
Confidence 33333333444443333333221 122234555555432 3344555555554 6799999765322
Q ss_pred -cccc-cCCCHHHHHHHHHHHHHHH
Q 017633 343 -GFTS-LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 343 -~~~~-~~~~~~~i~~~~~~l~~~l 365 (368)
.+++ ...+.|+...+++.+++.+
T Consensus 351 ~G~lRitvGt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 351 KGYLRITVGTPEENTVLMKCLKQFL 375 (375)
T ss_pred ceeEEEEcCCcccchHHHHHHHhhC
Confidence 2232 2447788889999998763
No 281
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.80 E-value=4.1e-18 Score=155.78 Aligned_cols=219 Identities=15% Similarity=0.129 Sum_probs=148.4
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...+|++.++++.+... .++++||+.|+..++... ..++|+||+..+.|.+. .......
T Consensus 62 ~~~p~~~~le~~lA~l~g~~~-~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y~~t-~~~~~~~------------- 124 (403)
T PRK07503 62 ISNPTLALLEQRMASLEGGEA-AVALASGMGAITATLWTL--LRPGDEVIVDQTLYGCT-FAFLHHG------------- 124 (403)
T ss_pred CCCchHHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHH--cCCCCEEEEccCccchH-HHHHHHH-------------
Confidence 456678899999999987544 566668999999998655 35778898877665332 2222110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|.++|++||+++|+|++|+....+
T Consensus 125 --~~~~G~~v~~vd~~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~~~~ 195 (403)
T PRK07503 125 --LGEFGVTVRHVDLTDPAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTPYLQ 195 (403)
T ss_pred --HhhCCEEEEEeCCCCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 011223444555558999999987 46888888877777888888 999999999999999999999632111
Q ss_pred cCccccccCCCcchhhhhhhccC-C-ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. . .++.+.-+.|+||.+++ | .+.|+++.++++++.++... .........+++.++.++..++.+ +...++.
T Consensus 196 ~~--l-~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-~~~~~g~~~s~~~a~l~l~~L~tl--~~r~~~~ 269 (403)
T PRK07503 196 RP--L-ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-LKDMTGAVMSPFDAFLLMRGLKTL--ALRMDRH 269 (403)
T ss_pred Cc--h-hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-HHhCcCCCCCHHHHHHHHcCcchH--HHHHHHH
Confidence 11 1 12332334578999995 5 78899888888887775211 111223567888888777777655 3345566
Q ss_pred HHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIID 280 (368)
Q Consensus 268 ~~~~~~l~~~l~~ 280 (368)
.++.+.+.+.|.+
T Consensus 270 ~~na~~~a~~L~~ 282 (403)
T PRK07503 270 CASAQAVAEWLAR 282 (403)
T ss_pred HHHHHHHHHHHHh
Confidence 6777777777765
No 282
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=1.6e-18 Score=157.88 Aligned_cols=287 Identities=15% Similarity=0.119 Sum_probs=175.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+..+...+|++.++++.+..+. ++++||+.|+..++... ..++|+|++....|++.........
T Consensus 60 ~~~p~~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~y~~t~~~~~~~~------------- 123 (389)
T PRK05968 60 GDNPTVRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSF--VEPGDRIVAVRHVYPDAFRLFETIL------------- 123 (389)
T ss_pred CCChhHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHH-------------
Confidence 3456678999999999875444 45578999999888654 3578899998887776432111110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++..|++++++++. ++++++++.+.+..+...+ +++|+++|++||+++|+|++|......
T Consensus 124 ---~~~G~~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~~~~ 192 (389)
T PRK05968 124 ---KRMGVEVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASPVFQ 192 (389)
T ss_pred ---HHcCceEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcchhcc
Confidence 01122233344447899988873 5677877765554444444 999999999999999999999533111
Q ss_pred cCccccccCCCcchhhhhhhccC-C-ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. ..++.+.-+.|++|.++| | .+.|+++.++++++.++.......+ ...++..++.++..++.+ ....++.
T Consensus 193 ~p---~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g--~~~~~~~A~~~l~~L~tl--~~r~~~~ 265 (389)
T PRK05968 193 RP---ITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLG--AKLSPFEAWLLLRGLRTL--PLRMKAH 265 (389)
T ss_pred Cc---hhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCC--CCCChHHHHHHHcccCcH--HHHHHHH
Confidence 11 123443334578899995 3 6788888888877766531111112 245667777766666544 3344555
Q ss_pred HHHHHHHHHHHHHHHHhcCCceEE-------------eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCee
Q 017633 268 NKITGELTQGIIDAGKKAGHAICG-------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 334 (368)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 334 (368)
.++++.+.+.|++ .+....+ .+.++++.|.+. ......+|.+.|...++.
T Consensus 266 ~~~a~~la~~L~~----~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-------------~~~~~~~f~~~L~~~~~~ 328 (389)
T PRK05968 266 EASALEIARRLKA----HPVVERVCHPALANHPPAGLSGTSGLFSFIFR-------------EGIDVRAFADALKLFRLG 328 (389)
T ss_pred HHHHHHHHHHHHh----CCCccEEECCCCCCChHHhCCCCceEEEEEEC-------------CHHHHHHHHHhCCccEEe
Confidence 5556666666654 3321111 134557777763 123457888888766666
Q ss_pred ecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 335 FAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 335 ~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++-|+... ..+++...-|+.+.+++-|++++++
T Consensus 329 ~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 329 VSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred cCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 65543221 0123344556777888888888764
No 283
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.80 E-value=1.1e-17 Score=151.73 Aligned_cols=301 Identities=15% Similarity=0.073 Sum_probs=178.1
Q ss_pred HHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhh
Q 017633 16 AALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 95 (368)
Q Consensus 16 ~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 95 (368)
+++.+.+.... + ...+...++++.++++++. +++++++||++|++.++.... ..+++.|++...+|+....... .
T Consensus 3 ~~~~~~~~~~~-~-~~~~~~~~~~~~la~~~~~-~~~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~~~-~ 77 (352)
T cd00616 3 EAVEEVLDSGW-L-TLGPKVREFEKAFAEYLGV-KYAVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANAIL-L 77 (352)
T ss_pred HHHHHHHHcCC-c-cCCHHHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHH-H
Confidence 45666665532 2 3456788999999999974 568888899999999997652 2467889998888887644333 3
Q ss_pred cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 017633 96 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~ 175 (368)
.|..+....+...... .|++++++.++ ++++++++.+ ++|...+ +++|.++|++||+
T Consensus 78 ~g~~~~~~~~~~~~~~-------------~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~i 134 (352)
T cd00616 78 LGATPVFVDIDPDTYN-------------IDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKRHGL 134 (352)
T ss_pred cCCeEEEEecCCCcCC-------------cCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHHcCC
Confidence 3333222111110111 17899998885 4677777653 3566666 9999999999999
Q ss_pred EEEEehhhhchhcccCccccccCCCcch--hhhh--hhccCCccceeeeeh-HHHHHHhcC---CCCc---------ccc
Q 017633 176 LLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLG--KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM---------YQA 238 (368)
Q Consensus 176 ~li~De~~~~~~~g~~~~~~~~~~~~di--~s~s--K~~~~G~~iG~v~~~-~~~~~~~~~---~~~~---------~~~ 238 (368)
++|+|++|+- |..+.....+...|+ .|++ |.+++| +.|+++.+ +++.+.++. .+.. ..+
T Consensus 135 ~li~D~a~~~---g~~~~~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (352)
T cd00616 135 PVIEDAAQAL---GATYKGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILG 210 (352)
T ss_pred eEEEECCCCC---CCeECCEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceee
Confidence 9999999962 111111112222344 4444 988543 56777664 566554431 1110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEEEEeecCCCcccchhcc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
.++..+++.++.+...++.+ +.+.++.+++.+++++.|.+.. ......... ....++.+.+...
T Consensus 211 ~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------- 277 (352)
T cd00616 211 YNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPE---------- 277 (352)
T ss_pred eccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCc----------
Confidence 23345667666666555544 3455666777777777776531 111110100 1223444443210
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCC---------------------------cccc--ccCCCHHHHHHHHHHHH
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFE---------------------------AGFT--SLAHSSDDIQHTITAAE 362 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~---------------------------~~~~--~~~~~~~~i~~~~~~l~ 362 (368)
...+..++.+.|.++||.++....+ .+++ ....+++|+++++++|+
T Consensus 278 -~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 278 -AGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred -CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0234578999999999977643211 1233 35679999999998874
No 284
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=4.4e-17 Score=150.10 Aligned_cols=292 Identities=15% Similarity=0.101 Sum_probs=176.2
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHH-------HhcCCceEEEEcCCCCCCchhhhhhcCCCccccCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR-------AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 105 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~-------~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (368)
....++++.++++++. +.+++++||++|+..++..+. ...+++.||+.+.+|.+........ |........
T Consensus 63 ~~~~~fe~~lA~~~g~-~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~-G~~pv~vdv 140 (438)
T PRK15407 63 RFNDAFEKKLAEFLGV-RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN-GLVPVFVDV 140 (438)
T ss_pred hhHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc-CCEEEEEec
Confidence 3467899999998863 478899999999999997653 2356789999998887765444433 332211111
Q ss_pred CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 106 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
....... |++++++.++ ++++++++.+.. |...+ +++|.++|++||++||+|++|+-
T Consensus 141 d~~~~~i-------------d~~~le~~i~---~~tkaVi~~~~~---G~p~d----l~~I~~la~~~gi~vIeDaa~a~ 197 (438)
T PRK15407 141 ELPTYNI-------------DASLLEAAVS---PKTKAIMIAHTL---GNPFD----LAAVKAFCDKHNLWLIEDNCDAL 197 (438)
T ss_pred CCCcCCc-------------CHHHHHHHcC---cCCeEEEEeCCC---CChhh----HHHHHHHHHHCCCEEEEECccch
Confidence 1111111 7999999887 467888887654 33344 99999999999999999999952
Q ss_pred hhcccCccccccCCCcchhhhh----hhccCCccceeeeeh-HHHHHHhc---CCCCc----------------------
Q 017633 186 FRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVA---PAGPM---------------------- 235 (368)
Q Consensus 186 ~~~g~~~~~~~~~~~~di~s~s----K~~~~G~~iG~v~~~-~~~~~~~~---~~~~~---------------------- 235 (368)
|..+.-...|..-|+.+|| |.+++|- .|+++.+ +++.+.++ ..+..
T Consensus 198 ---G~~~~g~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T PRK15407 198 ---GSTYDGRMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGEL 273 (438)
T ss_pred ---hhhcCCeeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccc
Confidence 2111111222222554444 7777554 4788775 44544322 11100
Q ss_pred -----------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc---eEEEE
Q 017633 236 -----------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG---MFGFF 301 (368)
Q Consensus 236 -----------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~ 301 (368)
..+..+..+.+.++.++..++.+ ++..++.+++.+++.+.|.+.......+....+... .+.+.
T Consensus 274 ~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~ 351 (438)
T PRK15407 274 PFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPIT 351 (438)
T ss_pred cccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEE
Confidence 12345567888888888888866 445667777777777777543100101111111111 22222
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-C--------------c-------------ccc--ccCCCH
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-E--------------A-------------GFT--SLAHSS 351 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~--------------~-------------~~~--~~~~~~ 351 (368)
+... .+....++.+.|.++||..+.... + . +++ ...+++
T Consensus 352 ~~~~-----------~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~ 420 (438)
T PRK15407 352 VKED-----------AGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTE 420 (438)
T ss_pred ECCc-----------CCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCH
Confidence 2110 112357899999999997653211 0 0 112 245689
Q ss_pred HHHHHHHHHHHHHHh
Q 017633 352 DDIQHTITAAEKVLR 366 (368)
Q Consensus 352 ~~i~~~~~~l~~~l~ 366 (368)
+|+++.++.|++++.
T Consensus 421 ~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 421 EMLDYVIEKIEEFFG 435 (438)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 285
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=5.8e-18 Score=154.13 Aligned_cols=218 Identities=16% Similarity=0.124 Sum_probs=142.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...+|++.++++++....+. ++||++|+..++..+ ..++|+|++.++.|.+.........
T Consensus 58 ~~~p~~~~Le~~lA~~~g~~~~i~-~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~t~~~~~~~~------------- 121 (388)
T PRK07811 58 TGNPTRTALEEQLAALEGGAYGRA-FSSGMAATDCLLRAV--LRPGDHIVIPNDAYGGTFRLIDKVF------------- 121 (388)
T ss_pred CCCccHHHHHHHHHHHhCCCceEE-eCCHHHHHHHHHHHH--hCCCCEEEEcCCCchHHHHHHHHhC-------------
Confidence 355678899999999987544444 457999999999766 3577899998888875432221111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++..|++++++.++ +++++++++..+|++|...+ +++|+++|++||+++|+|++|+.....
T Consensus 122 ---~~~gi~~~~~d~~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~~~~ 191 (388)
T PRK07811 122 ---TRWGVEYTPVDLSDLDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASPYLQ 191 (388)
T ss_pred ---cCCCeEEEEeCCCCHHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 11122334444458999999987 46788888877777787777 999999999999999999999632111
Q ss_pred cCccccccCCCcchhhhhhhccC-C-ccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.. . .++.+..+.|++|.++| | .+.||++++ +++.+.+.. .........++..+..++..++.+ +...++
T Consensus 192 ~p--~-~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~L~tl--~~R~~~ 263 (388)
T PRK07811 192 QP--L-ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF---LQNGAGAVPGPFDAYLTLRGLKTL--AVRMDR 263 (388)
T ss_pred Cc--h-hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 11 1 12333334578899985 3 567988774 566565542 111222244566665555555533 334566
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIIDA 281 (368)
Q Consensus 267 ~~~~~~~l~~~l~~~ 281 (368)
..++.+.+.+.|++.
T Consensus 264 ~~~na~~la~~L~~~ 278 (388)
T PRK07811 264 HSENAEAVAEFLAGH 278 (388)
T ss_pred HHHHHHHHHHHHHhC
Confidence 667777777777653
No 286
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.79 E-value=1.3e-16 Score=149.01 Aligned_cols=281 Identities=18% Similarity=0.187 Sum_probs=160.4
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhh----cCCCccccCCCCCCC
Q 017633 36 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK----AGSGVATLGLPDSPG 110 (368)
Q Consensus 36 ~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 110 (368)
.++.++++++++ +.+++.+++||+++++.++... ...++++|++.++.| ......+.. .|.++....+... .
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~-~~~~g~~Vlv~~~~~-~~~~~~~~~~~~~~G~~~~~v~~~~~-~ 191 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAV-RITKRKKVLVSGAVH-PEYREVLKTYLKGQGIEVVEVPYEDG-V 191 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHH-HhcCCCEEEEeCccC-HHHHHHHHHHHHhCCcEEEEecCCCC-C
Confidence 344466788887 6678999999999888777544 224667888876544 433333322 2333332222111 1
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--ehhhhchhc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRL 188 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~--De~~~~~~~ 188 (368)
+ |+++++++++ ++++++++... +++|.+.+ +++|+++|+++|+++++ |.+..+.
T Consensus 192 ~--------------d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-- 247 (447)
T PRK00451 192 T--------------DLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-- 247 (447)
T ss_pred C--------------CHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc--
Confidence 1 8999999887 46777777664 55788877 99999999999999998 5443322
Q ss_pred ccCccccccCCCcchh-----hhhhhcc-CCccceeeeehHHHHHHhcCC-------------------------CCccc
Q 017633 189 AYGGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA-------------------------GPMYQ 237 (368)
Q Consensus 189 g~~~~~~~~~~~~di~-----s~sK~~~-~G~~iG~v~~~~~~~~~~~~~-------------------------~~~~~ 237 (368)
......++. |++ +|||.+. +|+++||+++++++++.+... +....
T Consensus 248 --~~~~~~~~~--D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (447)
T PRK00451 248 --LKPPGEYGA--DIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKA 323 (447)
T ss_pred --CCCcccCCC--CEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccc
Confidence 111123333 443 5677776 788999999998888775210 00001
Q ss_pred cccCCCCHHHH-HHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 238 AGTLSGNPLAM-TAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 238 ~~t~~~~~~~~-~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
..+++.+...+ .++..+++.+.++ +..+++.+++++++++|++ .+..... ....+..+.+..
T Consensus 324 ~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~~g~~~~-~~~~~~~~~v~~--------- 389 (447)
T PRK00451 324 TSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAE----IGGVELF-DGPFFNEFVVRL--------- 389 (447)
T ss_pred cccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhh----cCCEEec-CCCeEEEEEEec---------
Confidence 11112222112 2333344444332 2344555555555555554 3211111 112121111110
Q ss_pred cccccHHHHHHHHHHHHcCeeecC----CC---CCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 314 KKSETTKFARFYRGMLEEGVYFAP----SQ---FEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~Gi~~~~----~~---~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
+ ....+++++|.++||...- .. ...+++ ....++++++++++.|++++
T Consensus 390 ---~-~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 390 ---P-KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ---C-CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 1247899999999887432 11 112333 33689999999999999875
No 287
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=4e-18 Score=155.21 Aligned_cols=295 Identities=13% Similarity=0.023 Sum_probs=177.7
Q ss_pred CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 29 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.++++...+|++.++++.+ .+++++++||++|+..++..+ ..++|.||+.++.|.++....-...
T Consensus 61 r~~~pt~~~Le~~lA~l~g-~~~~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~~~------------ 125 (394)
T PRK07050 61 LHATPTSLALAQRLAEIEG-GRHALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEWLA------------ 125 (394)
T ss_pred CCCCHHHHHHHHHHHHHhC-CCeEEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHHHH------------
Confidence 3566778899999999886 468999999999999999766 3578899999988876542111100
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
...+.++..++..+.+++++.++ +++++++++..+|+.+...+ +++|+++|+++|+++|+|++|..
T Consensus 126 ----~~~Gi~v~~vd~~~~~~l~~~i~---~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~--- 191 (394)
T PRK07050 126 ----RDFGITVRFYDPLIGAGIADLIQ---PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSA--- 191 (394)
T ss_pred ----HhcCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCccc---
Confidence 01111223333335677888886 46788888877666665555 99999999999999999999952
Q ss_pred ccCccccccCCCcchhhhhhhccCC--ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~G--~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
+........|.+..+.+++|.++|| .+.|++++ ++++++.++. .......+.++..+..++..++.+ ....+
T Consensus 192 ~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~---~~~~~G~~~~~~~a~l~lr~l~tl--~~Rl~ 266 (394)
T PRK07050 192 GLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKL---ARMRLGIGVSADDCSLVLRGLPSL--QVRLA 266 (394)
T ss_pred ccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHcCCCcH--HHHHH
Confidence 2111111123322245789999854 56888766 6777776652 122223355666655544444322 12345
Q ss_pred HHHHHHHHHHHHHHHHHH--h--cC-Cc---------eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 266 YLNKITGELTQGIIDAGK--K--AG-HA---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~--~--~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+..+++..+.+.|.+... + ++ +. ....+.+.++.+.+.... ...+..++.+.|..-
T Consensus 267 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~----------~~~~~~~~~~~l~~~ 336 (394)
T PRK07050 267 AHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY----------SPAQVDAFVEALELF 336 (394)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC----------CHHHHHHHHHcCCCC
Confidence 566666666666665310 0 00 00 011234555666653210 124456777777665
Q ss_pred CeeecCCCCCc-------------------cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 332 GVYFAPSQFEA-------------------GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 332 Gi~~~~~~~~~-------------------~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.++-|+... ..+++.+.-|+.+.+++-|++++++
T Consensus 337 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 337 AIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred eeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 55544443111 0124455567788888888888764
No 288
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=5.1e-18 Score=153.50 Aligned_cols=216 Identities=15% Similarity=0.137 Sum_probs=147.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+ .+++++++||++|+..++..+ ..+++.|++..+.|.+...........
T Consensus 50 ~~npt~~~Le~~lA~leg-~e~ivvt~gg~~Ai~~~l~al--l~~Gd~Il~~~~~y~~~~~~~~~~~~~----------- 115 (388)
T PRK08861 50 SGNPNRGLLEQTLSELES-GKGAVVTNCGTSALNLWVSAL--LGPDDLIVAPHDCYGGTYRLFNTRANK----------- 115 (388)
T ss_pred CCCchHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHHH--cCCCCEEEEcCCchHHHHHHHHHHHhc-----------
Confidence 466778999999999986 489999999999999999765 357788998888876543222111100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
.+.++..++..|+++++++++ +++++++++.++|++|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 116 -----~gi~v~~vd~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~--- 180 (388)
T PRK08861 116 -----GDFKVQFVDQSDAAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTP--- 180 (388)
T ss_pred -----CCeEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccc---
Confidence 011222333348899998887 46888888877777888888 999999999999999999999521
Q ss_pred cCccccccCCCcch--hhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 190 YGGAQEYFGVTPDL--TTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 190 ~~~~~~~~~~~~di--~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
.. ........|+ .|.+|.++| +...|++++ ++++.+.++. .........++..+..++..++.+ .-..
T Consensus 181 ~~--~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~---~~~~~G~~~~p~~a~l~~rgl~Tl--~lR~ 253 (388)
T PRK08861 181 VL--QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW---WGNCIGATGTPFDSYMTLRGIRTL--GARM 253 (388)
T ss_pred cc--CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH---HHhccCCCCChHHHHHHHhcCCCH--HHHH
Confidence 11 1112233454 577899985 367888876 4556555542 112223356777777776666654 3345
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017633 265 EYLNKITGELTQGIIDA 281 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~ 281 (368)
++..+++..+.+.|++.
T Consensus 254 ~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 254 RVHEESAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 67777788888877764
No 289
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.79 E-value=9.2e-17 Score=133.23 Aligned_cols=326 Identities=11% Similarity=0.059 Sum_probs=208.6
Q ss_pred ccCCCcHHHHHHHHHHHHcC-CCCCCCC--hhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 6 ILFPSYLQVLAALGETMKKG-TSFGAPC--LLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~-~~~~~~~--~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.||.+|-.+-.++.+++... ..+..|. ....++.+-+...|. ...-.++..+|+.+.+.|+-.. ..++|++++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~--lePgd~vLv 97 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL--LEPGDNVLV 97 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh--cCCCCeEEE
Confidence 55665554445555544431 1222221 345566666666665 3567788889999999999544 247889999
Q ss_pred EcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..+.++...+-+... |..+.+...+.-..+ .++++.+.+.+| +++++++....+.+|...+-
T Consensus 98 ~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~--------------~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862|consen 98 VSTGTWGQRAADCARRYGAEVDVVEADIGQAV--------------PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred EEechHHHHHHHHHHhhCceeeEEecCcccCc--------------cHHHHHHHHHhc--CCceEEEEecCccccccchH
Confidence 9888877665544442 333433322222222 699999999986 78888888888888877662
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC--c--
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--M-- 235 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~--~-- 235 (368)
++...++|++|+.++++|-+-+ -.|+.|.++.|+++.-.....|++++..+++-+..+++..++++.++. .
T Consensus 162 ---~~~~g~lc~k~~~lllVD~VaS--lggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~ 236 (385)
T KOG2862|consen 162 ---LAISGELCHKHEALLLVDTVAS--LGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSF 236 (385)
T ss_pred ---HHHHHHHhhcCCeEEEEechhh--cCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEE
Confidence 5677899999999999997765 244578899999865445566999965556668888888888875443 0
Q ss_pred cc----------------cccCCCCHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 236 YQ----------------AGTLSGNPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 236 ~~----------------~~t~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
+. ....+++....++.+++++.+.++++ .++.++..+.++..+++.+.+.-..........
T Consensus 237 yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlpt 316 (385)
T KOG2862|consen 237 YFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPT 316 (385)
T ss_pred EEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCc
Confidence 00 12235566788888999988866553 344555555555555554322211101111111
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCCC----cccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFE----AGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~----~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+. .|...|+.+++.++.++ ++.+..+-.+ .+|+ ....+.+.++..++.|+.++++
T Consensus 317 vttv~-------------vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 317 VTTVK-------------VPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ceeee-------------cCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 11222 24667789999999998 5666554222 2343 3555889999999999998864
No 290
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=8.1e-18 Score=152.65 Aligned_cols=288 Identities=12% Similarity=0.095 Sum_probs=179.3
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 111 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (368)
.+...+|++.++++++. +++++++||+.|+..++.+ ..++|.|++.+..|.+.........
T Consensus 46 ~p~~~~le~~la~l~g~-~~~l~~~sG~~al~~~l~l---l~~Gd~Vl~~~~~y~~~~~~~~~~~--------------- 106 (378)
T TIGR01329 46 NPTRTALESLLAKLDKA-DRAFAFSSGMAALDVITRL---LNNGDEIIAGDDLYGGTDRLLTQVV--------------- 106 (378)
T ss_pred ChHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHH---hCCCCEEEEcCCCchHHHHHHHHHH---------------
Confidence 45678999999998865 5667777899998876653 3577889988877765422111110
Q ss_pred CCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC
Q 017633 112 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 191 (368)
Q Consensus 112 ~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~ 191 (368)
...+.++..++..|+++++++++ +++++++++...|++|.+.+ +++|+++|++||+++|+|++|.. +..
T Consensus 107 -~~~G~~v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~---~~~ 175 (378)
T TIGR01329 107 -PRSGVVVVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMS---PLL 175 (378)
T ss_pred -HHcCcEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCcc---ccc
Confidence 01122344444458999999987 47889999988888888888 99999999999999999999842 111
Q ss_pred ccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH
Q 017633 192 GAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 268 (368)
Q Consensus 192 ~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 268 (368)
...-.++.+.-+.|.+|.++| +...|++++ ++.+.+.+.. .........++..+..+...++.+ ....++..
T Consensus 176 ~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~---~~~~~G~~~~~~~a~l~~~~l~tl--~~R~e~~~ 250 (378)
T TIGR01329 176 CNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF---LQNSTGSGLAPFDCWLLLRGIKTL--AIRIEKQQ 250 (378)
T ss_pred CChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH---HHHhcCCcCCHHHHHHHHccCCCH--HHHHHHHH
Confidence 111123333334578899985 367898877 4555555542 112122345566555544444333 33456677
Q ss_pred HHHHHHHHHHHHHHH--h--cC-Cce---------EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCee
Q 017633 269 KITGELTQGIIDAGK--K--AG-HAI---------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 334 (368)
Q Consensus 269 ~~~~~l~~~l~~~~~--~--~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 334 (368)
+++..+.+.|++.-. + ++ +.. ...+.++++.|.+. ......+|.+.|..-++.
T Consensus 251 ~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-------------~~~~~~~~~~~L~~~~i~ 317 (378)
T TIGR01329 251 ENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-------------SVALSKRLVEATKLFSIT 317 (378)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-------------CHHHHHHHHHhCcCcccc
Confidence 777777777764211 0 00 000 11245567777762 223356888888655777
Q ss_pred ecCCCCCcc-------------------------ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 335 FAPSQFEAG-------------------------FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 335 ~~~~~~~~~-------------------------~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++-|+.... .+++...-|+.+.+++-|++++++
T Consensus 318 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 318 VSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVT 375 (378)
T ss_pred cCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 766642211 123445557888889999988865
No 291
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.78 E-value=3.1e-17 Score=147.73 Aligned_cols=231 Identities=13% Similarity=0.120 Sum_probs=153.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|+++++++.+ .+++++++||++|+..++.++ .++|+||+....|.+.. ..+..... ..
T Consensus 51 ~~~p~~~~le~~lA~leg-~~~~v~~~sG~aAi~~~l~~l---~~GD~VI~~~~~yg~~~-~~~~~~~~---------~~ 116 (364)
T PRK07269 51 TKNPTRAKLEETLAAIES-ADYALATSSGMSAIVLAFSVF---PVGSKVVAVRDLYGGSF-RWFNQQEK---------EG 116 (364)
T ss_pred CCCccHHHHHHHHHHHhC-CCeEEEeCCHHHHHHHHHHHh---CCCCEEEEecCCcCchH-HHHHHHHh---------cC
Confidence 456778899999999984 568999999999999988533 57789999887776543 22221100 00
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
+ ..+... .|+++++++++ +++++++++..+|++|.+.+ +++|+++|+++|+++|+|++|.. +
T Consensus 117 ~------~~~~~~--~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~---~ 178 (364)
T PRK07269 117 R------FHFTYA--NTEEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYS---P 178 (364)
T ss_pred c------EEEEec--CCHHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcc---c
Confidence 0 000111 17899999987 46888888888887888787 99999999999999999999841 1
Q ss_pred cCccccccCCCcch--hhhhhhccC-C-ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 190 YGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 190 ~~~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
. .....+...|+ .|++|.++| | .-.|++++ ++++.+.++. .........+++.++.++..++.+ +...
T Consensus 179 ~--~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~---~~~~~G~~~s~~~a~l~~~~L~tL--~~r~ 251 (364)
T PRK07269 179 I--YQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY---NLNTTGAVLSPFDSYLLMRGLKTL--SLRM 251 (364)
T ss_pred c--cCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHcCCCcH--HHHH
Confidence 1 11223444565 467799985 3 44677776 4666666652 111222456888888887777755 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--ceEEeeccceEEEEee
Q 017633 265 EYLNKITGELTQGIIDAGKKAGH--AICGGYISGMFGFFFT 303 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~ 303 (368)
++..++++.+.+.|++ ++. ....++.+.++.|.+.
T Consensus 252 ~~~~~na~~~a~~L~~----~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 252 ERSTANAQEVVAFLKK----SPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHHHHHHHHHHh----CCCccEEeCCCcCcEEEEEEC
Confidence 5666666666666654 332 2234667888888873
No 292
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=2.9e-15 Score=138.94 Aligned_cols=315 Identities=15% Similarity=0.091 Sum_probs=180.4
Q ss_pred CcHHHHHHHHHHHHc-C------CCCCCCChhHHHHHH----HHHhhCCC-CCeEEE---eCChHHHHHHHHHHHHHhcC
Q 017633 10 SYLQVLAALGETMKK-G------TSFGAPCLLENVLAE----MVISAVPS-IEMVRF---VNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~l~~----~l~~~~~~-~~~v~~---~~~gt~a~~~al~~~~~~~~ 74 (368)
.+|.+++++...+.+ . ..++..++...++.+ +..+.++. .+.+.+ .+||+.|+..++..+ ..+
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL--~~p 123 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTAL--LQP 123 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHh--CCC
Confidence 567788888877733 1 122223344444443 34455553 333333 378999999999766 357
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC------CHHHHHHHHHcCCCCeEEEEE-c
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIIL-E 147 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~~~~~~~~~~~~~~-~ 147 (368)
+|.|+..+-...|+........+...... .. ..+...+.++ |+++|++.+.+. +++.+++ +
T Consensus 124 gD~Il~~d~~~gGhl~H~~~~~g~~~s~~------~~----~~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~ 191 (475)
T PLN03226 124 HDRIMGLDLPHGGHLSHGYQTDGKKISAT------SI----YFESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA 191 (475)
T ss_pred CCEEEECCCCcCcchhhhhhhcccccccc------eE----EEEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec
Confidence 78888855433333222222212111000 00 0000011111 899999999754 4555555 4
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcch--hhhhhhccCCccceeeeehH
Q 017633 148 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRR 223 (368)
Q Consensus 148 ~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~ 223 (368)
++ .+...+ +++|+++|++||++|++|++| .|+ ..+.. . ...+ ..|+ .|++|++.|. +.|++++++
T Consensus 192 S~---~s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~-~-~p~~-~~Div~~t~hK~L~GP-~Gg~I~~~~ 260 (475)
T PLN03226 192 SA---YPRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQEA-A-SPFE-YCDVVTTTTHKSLRGP-RGGMIFFRK 260 (475)
T ss_pred Cc---CCCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCCC-C-CCCC-CCeEEEecCcccccCC-CceEEEEch
Confidence 43 445556 999999999999999999999 555 22111 1 1111 2455 4678999643 347777777
Q ss_pred HHH-----------HH--hcCCCCccccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 224 DIM-----------EM--VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 224 ~~~-----------~~--~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
++. +. ......+.. ...++++...++..++++.+.+.+ +.+++.++.+++++.|.+. ++
T Consensus 261 ~~~~~~~~g~~~~~d~~~~i~~a~~~~-~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~----G~ 335 (475)
T PLN03226 261 GPKPPKGQGEGAVYDYEDKINFAVFPG-LQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK----GY 335 (475)
T ss_pred hhcccccCCCccHHHHHHHhccccCCc-cCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 543 22 111111111 222456677777778898886544 4666777777777766653 33
Q ss_pred ceEEe-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC---------CCcccc------ccCCCH
Q 017633 288 AICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFT------SLAHSS 351 (368)
Q Consensus 288 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------~~~~~~------~~~~~~ 351 (368)
..... ...+++.+++.. ...+..++.+.|.+.||.+..+. .+.+++ +..+++
T Consensus 336 ~l~~~~t~~hi~lv~~~~------------~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~ 403 (475)
T PLN03226 336 KLVTGGTDNHLVLWDLRP------------LGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVE 403 (475)
T ss_pred EEEcCCCCCCEEEEEccC------------CCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCH
Confidence 32221 124566666532 22234678888888999887542 112332 467799
Q ss_pred HHHHHHHHHHHHHHh
Q 017633 352 DDIQHTITAAEKVLR 366 (368)
Q Consensus 352 ~~i~~~~~~l~~~l~ 366 (368)
+|++++.+.|.+++.
T Consensus 404 ~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 404 KDFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998875
No 293
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=9e-17 Score=145.30 Aligned_cols=215 Identities=15% Similarity=0.081 Sum_probs=139.7
Q ss_pred CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 29 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.++++...+|++.++++. + ++.++++||++|+..++... ..++|+|++.++.|++....+....
T Consensus 47 ry~~p~~~~Le~~lA~l~-~-~~~v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l------------ 110 (366)
T PRK07582 47 RASNPTWRALEAALGELE-G-AEALVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYL------------ 110 (366)
T ss_pred CCCCccHHHHHHHHHHHc-C-CCEEEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHH------------
Confidence 356778899999999998 4 45566678999999888654 3567899999888877543221110
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
...+.++..++.++.. + .+. +++++++++..+|++|.+.+ +++|+++|+++|+++++|++|... .
T Consensus 111 ----~~~G~~v~~v~~~~~~--~-~~~---~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~-~ 175 (366)
T PRK07582 111 ----APLGVTVREAPTAGMA--E-AAL---AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP-L 175 (366)
T ss_pred ----hcCeEEEEEECCCChH--H-Hhc---cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc-c
Confidence 0012233334333322 1 222 36777888777777777777 999999999999999999999421 1
Q ss_pred ccCccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
+.. ..+ ++.+.-+.|++|+++| |+++||+++ ++++++.+.. .........+++.+..+...++.+ +-..+
T Consensus 176 ~~~-p~~-~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~---~~~~~g~~~~~~~a~l~~r~l~tl--~~R~~ 248 (366)
T PRK07582 176 GQR-PLE-LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER---WRLLAGAIPGPFEAWLAHRSLGTL--GLRFA 248 (366)
T ss_pred ccC-chh-cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccccH--HHHHH
Confidence 111 111 2332234578899974 689999987 4677776652 122233356777777776666644 33446
Q ss_pred HHHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDA 281 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~ 281 (368)
+..+++..+.+.|++.
T Consensus 249 ~~~~na~~la~~L~~~ 264 (366)
T PRK07582 249 RQCANALAVAELLAGH 264 (366)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7778888888888764
No 294
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=5.9e-17 Score=147.14 Aligned_cols=215 Identities=14% Similarity=0.086 Sum_probs=143.2
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
..++...+|++.++++++. +++++++||++|+..++... ..++|.|++..+.|++...........+
T Consensus 50 ~~np~~~~lE~~lA~l~g~-~~~l~~~sG~~Ai~~~l~~l--l~~GD~Vlv~~~~y~~~~~~~~~~~~~g---------- 116 (385)
T PRK08574 50 EENPTLRPLEEALAKLEGG-VDALAFNSGMAAISTLFFSL--LKAGDRVVLPMEAYGTTLRLLKSLEKFG---------- 116 (385)
T ss_pred CCCccHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHHHHHhhccC----------
Confidence 3456788999999999975 45677789999999998655 3568899998888876533222111111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-chhc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~ 188 (368)
.++..+.. |+++++++++. .++++++++..+|++|.+.+ +++|+++|++||+++|+|++|+ ++.
T Consensus 117 -------~~v~~~~~-d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~- 181 (385)
T PRK08574 117 -------VKVVLAYP-STEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLL- 181 (385)
T ss_pred -------cEEEEECC-CHHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcccc-
Confidence 11111211 68889998873 26888888888888898888 9999999999999999999994 321
Q ss_pred ccCccccccCCCcchhhhhhhccC-Ccc-ceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~~-G~~-iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.....++.+..+.|++|.++| |-. .|++++ ++++.+.++.. ....+...++..++.++..++.+ +...+
T Consensus 182 ---~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~---~~~~g~~~~p~~a~l~l~~l~tL--~~R~~ 253 (385)
T PRK08574 182 ---YRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW---RRRLGTIMQPFEAYLVLRGLKTL--EVRFE 253 (385)
T ss_pred ---CChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH---HHhcCCCCCHHHHHHHHcccCcH--HHHHH
Confidence 111123443345688999985 433 465554 67776666521 12223356677777777776655 33456
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIID 280 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~ 280 (368)
+..+++.++.+.|++
T Consensus 254 ~~~~na~~la~~L~~ 268 (385)
T PRK08574 254 RQCRNAMAIAEFLSE 268 (385)
T ss_pred HHHHHHHHHHHHHHc
Confidence 666677777777764
No 295
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=1.4e-15 Score=138.55 Aligned_cols=290 Identities=17% Similarity=0.145 Sum_probs=170.3
Q ss_pred hHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh---------cC--------------------CceEEEEcC
Q 017633 34 LENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---------TG--------------------RERIIKFEG 83 (368)
Q Consensus 34 ~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~---------~~--------------------~~~vi~~~~ 83 (368)
.+.-..++..++|+ ....|. ..||+.|+..++..+... +| +|.|+..+.
T Consensus 96 ie~l~~~ra~~lf~a~~anvq-p~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l 174 (493)
T PRK13580 96 VEWEAAEHAKELFGAEHAYVQ-PHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSL 174 (493)
T ss_pred HHHHHHHHHHHHhCCCccccc-CCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecC
Confidence 33344444555665 344444 457999999998666432 11 688888866
Q ss_pred CCCCCchhhh--hhcCCCccccCC--CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 84 CYHGHADPFL--VKAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 84 ~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
...|+..... ...+.......+ ....+. -|++++++.++. .++.+++....+. +...+
T Consensus 175 ~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~-------------iD~d~l~~~~~~---~~plvii~g~S~~-~~~~d- 236 (493)
T PRK13580 175 DSGGHLTHGFRPNISGKMFHQRSYGVDPDTGL-------------LDYDEIAALARE---FKPLILVAGYSAY-PRRVN- 236 (493)
T ss_pred CCCCeeecCcccchhhheeeeEecccCcccCc-------------cCHHHHHHHHhh---cCCEEEEeCcccc-CCCcC-
Confidence 6655433221 001110100001 111111 189999999984 3444444444444 44667
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhh-hchhcccCccccccC--CCcch--hhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFG--VTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~-~~~~~g~~~~~~~~~--~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|+++|++||++|++|++| .|+..+.... ..++ ...|+ .|++|++.|. +.|++++++++.+.+....+
T Consensus 237 ---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~-~~~~~~~~~D~vtgT~hKaL~GP-~GG~I~~~~~l~~~L~~a~P 311 (493)
T PRK13580 237 ---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFT-GDEDPVPHADIVTTTTHKTLRGP-RGGLVLAKKEYADAVDKGCP 311 (493)
T ss_pred ---HHHHHHHHHHcCCEEEEECchhhceeccccch-hhcCCCCCCcEEEeCChhhccCC-CeEEEEecHHHHHHHhhCCC
Confidence 999999999999999999999 5552122211 1111 13454 5788999543 46888889999888854333
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecCCCccc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 310 (368)
+.+++ ..++ ..+++..++..+.+++ +.+++.++.+++++.|.+.+ +.... ....+++.+.+..
T Consensus 312 ~i~gg--~l~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G----~~vv~ggTdshIV~V~lg~------ 378 (493)
T PRK13580 312 LVLGG--PLPH-VMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG----ARLVTGGTDNHLVLIDVTS------ 378 (493)
T ss_pred cccCC--CccH-HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC----CCccCCCCCCCEEEEEeCC------
Confidence 33322 2333 4444334555554333 67888888888888887753 22111 1335677777742
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCCCCc----------ccc--cc----CCCHHHHHHHHHHHHHHHh
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQFEA----------GFT--SL----AHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~----------~~~--~~----~~~~~~i~~~~~~l~~~l~ 366 (368)
.......+.+.|.+.||.+.....|. +|+ +. .++++|++++++.|.+++.
T Consensus 379 ------~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 379 ------FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred ------HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 11223567789999999998643221 233 22 4578999999999998875
No 296
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=3.8e-17 Score=149.89 Aligned_cols=218 Identities=19% Similarity=0.173 Sum_probs=144.5
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
+++...+|++.++++.+.. ..++++||++|+..++..+. .+++.|++....|++........ -
T Consensus 56 ~~pt~~~Le~~lA~l~g~~-~~l~~ssG~~Ai~~al~al~--~~Gd~Vl~~~~~Y~~t~~~~~~~-l------------- 118 (425)
T PRK06084 56 MNPTNDVLEQRVAALEGGV-GALAVASGMAAITYAIQTIA--EAGDNIVSVAKLYGGTYNLLAHT-L------------- 118 (425)
T ss_pred CCchHHHHHHHHHHHhCCC-ceeEehhHHHHHHHHHHHHh--CCCCEEEEeCCCcchHHHHHHHh-c-------------
Confidence 4566789999999998743 55677789999999997653 46788999988888643322211 0
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
...+.++..++..|+++++++++ +++++++++++++++|.+.+ +++|.++|++||+++|+|++|+.. .
T Consensus 119 --~~~gi~v~~~d~~d~e~le~ai~---~~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~~---~ 186 (425)
T PRK06084 119 --PRIGIETRFAAHDDIAALEALID---ERTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVATP---V 186 (425)
T ss_pred --ccceeEEEEECCCCHHHHHHHhc---cCCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccc---c
Confidence 01122333444458999999997 46788888888888898888 999999999999999999999621 1
Q ss_pred CccccccCCCcc--hhhhhhhccC-Cccceeeeeh-HHH-HHHh-------cC-------------CC----------Cc
Q 017633 191 GGAQEYFGVTPD--LTTLGKIIGG-GLPVGAYGGR-RDI-MEMV-------AP-------------AG----------PM 235 (368)
Q Consensus 191 ~~~~~~~~~~~d--i~s~sK~~~~-G~~iG~v~~~-~~~-~~~~-------~~-------------~~----------~~ 235 (368)
. .......+| +.|++|.++| |.++|.+++. +.. .... .. .+ ..
T Consensus 187 ~--~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (425)
T PRK06084 187 L--CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVP 264 (425)
T ss_pred c--CChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHH
Confidence 1 112223345 4588999995 6788876553 321 0010 00 00 00
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
........++..++.++..++.+ +...++..+++..+.+.|++.
T Consensus 265 ~~~~g~~l~~~~a~l~lrgl~tl--~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 265 LRNMGAALSPFNAFLILQGLETL--ALRMERHTENALKVARYLQQH 308 (425)
T ss_pred HHhcCCCCCHHHHHHHHcCcCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 11223356777777766666655 445677778888888887764
No 297
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.76 E-value=9.3e-18 Score=154.29 Aligned_cols=163 Identities=18% Similarity=0.184 Sum_probs=117.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++++. +..++++||++|+..++..+. .+++.|++.++.|++.........
T Consensus 54 ~~~p~~~~le~~lA~l~g~-~~~v~~~sG~~Ai~~al~~l~--~~Gd~Vl~~~~~y~~t~~~~~~~~------------- 117 (418)
T TIGR01326 54 LMNPTTDVLEQRIAALEGG-VAALAVASGQAAITYAILNLA--QAGDNIVSSSYLYGGTYNLFKHTL------------- 117 (418)
T ss_pred CCChhHHHHHHHHHHHhCC-CeEEEEccHHHHHHHHHHHHh--CCCCEEEEECCCcHHHHHHHHHHH-------------
Confidence 4567788999999999864 567888899999999997653 467889998888876432211110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++||+++|+|++|.. +
T Consensus 118 ---~~~G~~v~~v~~~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~---~ 184 (418)
T TIGR01326 118 ---KRLGIEVRFVDPDDPEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFAT---P 184 (418)
T ss_pred ---HHcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCch---h
Confidence 01122333444448999999987 46788888888777888887 99999999999999999999952 1
Q ss_pred cCccccccCCCcch--hhhhhhccC-CccceeeeehH
Q 017633 190 YGGAQEYFGVTPDL--TTLGKIIGG-GLPVGAYGGRR 223 (368)
Q Consensus 190 ~~~~~~~~~~~~di--~s~sK~~~~-G~~iG~v~~~~ 223 (368)
. ........+|+ .|+||.+++ |+|+|++++++
T Consensus 185 ~--~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 185 Y--LCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred h--cCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 1 11122233454 489999995 89999987753
No 298
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.5e-17 Score=148.82 Aligned_cols=214 Identities=13% Similarity=0.112 Sum_probs=145.6
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 111 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (368)
++...+|++.++++.++ +.+++++||++|+..++... ..++|+||+.++.|.+.....-..
T Consensus 60 npt~~~Le~~iA~le~~-~~~~~~~sG~~Ai~~~l~al--l~~GD~Vvv~~~~Y~~t~~l~~~~---------------- 120 (394)
T PRK09028 60 TPTHFAFQAAIVELEGG-AGTALYPSGAAAISNALLSF--LKAGDHLLMVDSCYEPTRDLCDKI---------------- 120 (394)
T ss_pred CchHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHh----------------
Confidence 34567999999998754 46788899999999988655 357889999988886653221110
Q ss_pred CCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC
Q 017633 112 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 191 (368)
Q Consensus 112 ~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~ 191 (368)
....+.++..++..+.++++++++ +++++++++.++|++|.+.+ +++|+++|++||+++++|++|+. +.
T Consensus 121 l~~~Gi~v~~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~---p~- 189 (394)
T PRK09028 121 LKGFGIETTYYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS---PI- 189 (394)
T ss_pred hhhcceEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc---cc-
Confidence 001122333344446678888886 57899999988888887777 99999999999999999999952 21
Q ss_pred ccccccCCCcch--hhhhhhccC-C-ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 192 GAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 192 ~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
........+|+ .+.+|.++| | ...|+++.++++.+.+.. .........++..+..+...++.+ .-..++.
T Consensus 190 -~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~---~~~~~G~~~~p~~a~l~~rgl~TL--~lR~~~~ 263 (394)
T PRK09028 190 -NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLRE---HSYLMGQCTSPDDVYLAMRGLRTL--GVRLAQH 263 (394)
T ss_pred -cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHcccCcH--HHHHHHH
Confidence 12223344465 467899985 3 678877777766655542 111122356778887777777655 3345667
Q ss_pred HHHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIIDA 281 (368)
Q Consensus 268 ~~~~~~l~~~l~~~ 281 (368)
.+++..+.+.|++.
T Consensus 264 ~~na~~la~~L~~~ 277 (394)
T PRK09028 264 EKNALKVANWLATR 277 (394)
T ss_pred HHHHHHHHHHHhcC
Confidence 77777777777653
No 299
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=9.9e-17 Score=139.43 Aligned_cols=318 Identities=20% Similarity=0.216 Sum_probs=201.5
Q ss_pred CCceeccCCCc--HHHHHHHHHHHHcCC------CC-CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH
Q 017633 1 MPQLIILFPSY--LQVLAALGETMKKGT------SF-GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 71 (368)
Q Consensus 1 ~~~~~~~g~~~--~~v~~a~~~~~~~~~------~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~ 71 (368)
|++=|++|+.. -.-.++..+.+++.. .. -...+.+.++.+..++..+-.+.++|.. |-..+..-+-..
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~m-Gf~TNs~~~p~l-- 217 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSM-GFATNSMNIPSL-- 217 (519)
T ss_pred ecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEec-cccccccCccee--
Confidence 35667777632 223344444444421 11 2345788999999999998778888876 444444333222
Q ss_pred hcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---------C-CCCe
Q 017633 72 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---------N-KGEI 141 (368)
Q Consensus 72 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---------~-~~~~ 141 (368)
-++...|+.+.-.|++. ..-.+++++.+.-+.+||.++||+.+++ | +.+.
T Consensus 218 -~~~gsLIiSDelNHaSi-------------------~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kk 277 (519)
T KOG1357|consen 218 -LGKGSLIISDELNHASL-------------------ITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKK 277 (519)
T ss_pred -ecCCcceeeccccchhe-------------------eccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchh
Confidence 12333444455556553 2334456666777788899999999985 2 2345
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch-hcccCccccccCCCc---c--hhhhhhhccCCc
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTP---D--LTTLGKIIGGGL 214 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~-~~g~~~~~~~~~~~~---d--i~s~sK~~~~G~ 214 (368)
-.++++.++++.|.+.. +.++.++++||...|+.||+|+ |. ..+.....+.++.+| | +.+|.|++++
T Consensus 278 i~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga-- 351 (519)
T KOG1357|consen 278 ILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA-- 351 (519)
T ss_pred eeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc--
Confidence 68889999999999999 8999999999999999999994 33 222345567777764 3 3589999984
Q ss_pred cceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-------CCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 215 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-------PGTYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 215 ~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
..|++.+++++++.++.........+ +.+++.+...+.+++.+.- .+..+++.++..++|..+.+.+ +
T Consensus 352 ~GGyiagsk~lid~lrt~s~~~~yat-~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g----f 426 (519)
T KOG1357|consen 352 AGGYIAGSKELIDYLRTPSPSALYAT-SLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG----F 426 (519)
T ss_pred ccceecCcHHHHhhhccCCCceeecc-cCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc----E
Confidence 24678889999999885433333333 3444545555556666542 1245677777888877776642 2
Q ss_pred ceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc---------cccccCCCHHHHHHHH
Q 017633 288 AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---------GFTSLAHSSDDIQHTI 358 (368)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~---------~~~~~~~~~~~i~~~~ 358 (368)
...-....+.+.+.+-. +.....+.+.|+++++.+...+.|. ++.+..++.|+++.++
T Consensus 427 ivyG~~dSpVvplll~~-------------~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 427 IVYGNNDSPVVPLLLYG-------------PAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRAL 493 (519)
T ss_pred EEecCCCCCcceeeecC-------------cccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHH
Confidence 21111112222222211 1123567888999977766655443 3457888999999999
Q ss_pred HHHHHHH
Q 017633 359 TAAEKVL 365 (368)
Q Consensus 359 ~~l~~~l 365 (368)
+.+.++-
T Consensus 494 ~~i~~~g 500 (519)
T KOG1357|consen 494 EVIDRVG 500 (519)
T ss_pred HHHhhhc
Confidence 9988763
No 300
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.75 E-value=7.5e-16 Score=151.66 Aligned_cols=301 Identities=14% Similarity=0.140 Sum_probs=192.0
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChH----HHHHHHHHHHHHhcC--CceEEEEcCCCCCCchhhhhhcCCCccccCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGT----EACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLP 106 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt----~a~~~al~~~~~~~~--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (368)
+...++++.++++++- +.|.|+++++ +++..+++.....++ .+++++.+.+-|++........|.++......
T Consensus 568 ~~~~~~r~~la~i~g~-~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d 646 (993)
T PLN02414 568 EMFEDLGDLLCEITGF-DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTD 646 (993)
T ss_pred HHHHHHHHHHHHHhCC-CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccC
Confidence 3556888888888854 8999999988 788888865533212 23467777889998887777666655443332
Q ss_pred CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 107 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
.++.. |+++|+++++.+.++++++++...++.+|...+ +++|+++|+++|+++++|-++.
T Consensus 647 -~~G~v-------------Dle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~-- 706 (993)
T PLN02414 647 -AKGNI-------------NIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM-- 706 (993)
T ss_pred -CCCCc-------------CHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH--
Confidence 22222 899999999865457888888777777777777 9999999999999999999984
Q ss_pred hcccCccccccCCCcchhhh--hhhcc-----CCccceeeeehHHHHHHhcCCC--C----c---cc--cccCC----CC
Q 017633 187 RLAYGGAQEYFGVTPDLTTL--GKIIG-----GGLPVGAYGGRRDIMEMVAPAG--P----M---YQ--AGTLS----GN 244 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~s~--sK~~~-----~G~~iG~v~~~~~~~~~~~~~~--~----~---~~--~~t~~----~~ 244 (368)
.+-......-....|++.+ -|+|+ ||..+|++.+++++...+-... . . .. .+|.. ++
T Consensus 707 -~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~ 785 (993)
T PLN02414 707 -NAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGS 785 (993)
T ss_pred -HhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhh
Confidence 1111111212334577665 48776 3567999999998887765321 0 0 10 12212 22
Q ss_pred HHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc---eEEEEeecCCCcccchhccccc
Q 017633 245 PLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISG---MFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
.+.+..+..-++.+..+++ .++...++.+++++|.+. ++..... ..+. -+.+.+.. .+ ...+
T Consensus 786 al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~~~-~~~~~~hEfv~~~~~--l~------~~~g 853 (993)
T PLN02414 786 ALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLFRG-KNGTCAHEFIIDLRP--FK------NTAG 853 (993)
T ss_pred HHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCccccC-CCCCeeeeEEEeccc--cc------cccC
Confidence 2444455555566655666 666777888888888773 2221111 1111 11222210 00 0011
Q ss_pred HHHHHHHHHHHHcCeeecCCCCC-----ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFE-----AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~-----~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
....+++++|.+.||.......+ .+.+.-..+++|+++++++|+++..+
T Consensus 854 ~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 854 IEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred CCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 33478999999999887643222 12356777999999999999988754
No 301
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.75 E-value=6.7e-16 Score=141.14 Aligned_cols=311 Identities=16% Similarity=0.085 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
++-.+++.+.+.... + .......++++.++++++.. +.++++||++|+..++..+ ...++|.|++.+.+|.+....
T Consensus 10 ~~~~~~v~~~~~~~~-~-~~g~~~~~le~~la~~~g~~-~~v~~~sgt~al~~~l~al-~~~~Gd~Viv~~~~~~~~~~~ 85 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF-L-TQGPTVPAFEEALAEYVGAK-YAVAFNSATSALHIACLAL-GVGPGDRVWTTPITFVATANC 85 (380)
T ss_pred HHHHHHHHHHHhcCC-c-cCChhHHHHHHHHHHHHCCC-eEEEEcCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHHHH
Confidence 345777777776532 2 23455788999999998753 4455668999999999755 234678899988888765433
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 170 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~ 170 (368)
....|..+............ |++++++.+++.+ ++++++++.. .+|...+ +++|.++|
T Consensus 86 -~~~~G~~~~~~~~~~~~~~~-------------d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~ 144 (380)
T TIGR03588 86 -ALYCGAKVDFVDIDPDTGNI-------------DEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALA 144 (380)
T ss_pred -HHHcCCEEEEEecCCCcCCc-------------CHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHH
Confidence 33334333222221111111 8999999997421 2566666432 2466666 99999999
Q ss_pred HHhCCEEEEehhhhchhcccCccccccCC--Ccchh--hhh--hhccCCccceeeee-hHHHHHHhcC---CCCc-----
Q 017633 171 KENGALLIFDEVMTGFRLAYGGAQEYFGV--TPDLT--TLG--KIIGGGLPVGAYGG-RRDIMEMVAP---AGPM----- 235 (368)
Q Consensus 171 ~~~~~~li~De~~~~~~~g~~~~~~~~~~--~~di~--s~s--K~~~~G~~iG~v~~-~~~~~~~~~~---~~~~----- 235 (368)
++||++||+|++|+. |..+....++. .-|+. |++ |.++.| ..|+++. ++++.+.++. .+..
T Consensus 145 ~~~~~~lI~D~a~a~---g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (380)
T TIGR03588 145 KKHGLKIIEDASHAL---GAEYGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLL 220 (380)
T ss_pred HHcCCEEEEECCCcc---cCccCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999962 21111122333 23554 443 888754 4566655 4666554431 1100
Q ss_pred --------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee---ccceE
Q 017633 236 --------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY---ISGMF 298 (368)
Q Consensus 236 --------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~ 298 (368)
..+..+..+.+.++.++..++.+ +...++.+++.+++.+.|.++. .........+ .....
T Consensus 221 ~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~ 297 (380)
T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLP-YFTPLTIPLGSKSAWHLY 297 (380)
T ss_pred ccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCEeEEEEE
Confidence 01123445667767666666654 4456666777777777776531 1110000000 01111
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-------------------------ccc--ccCCCH
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------------------------GFT--SLAHSS 351 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-------------------------~~~--~~~~~~ 351 (368)
.+.+... ......++.+.|.++||.++....+. +++ ....++
T Consensus 298 ~i~~~~~-----------~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~ 366 (380)
T TIGR03588 298 PILLDQE-----------FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTL 366 (380)
T ss_pred EEEECCc-----------CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCH
Confidence 2222100 11235788999999999886432110 122 245699
Q ss_pred HHHHHHHHHHHHHH
Q 017633 352 DDIQHTITAAEKVL 365 (368)
Q Consensus 352 ~~i~~~~~~l~~~l 365 (368)
+|++++++.|++++
T Consensus 367 ~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 367 EQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999874
No 302
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.75 E-value=6.1e-16 Score=135.80 Aligned_cols=191 Identities=20% Similarity=0.216 Sum_probs=134.3
Q ss_pred ccCCCcHHHHHHHHHHHHcCC---CCC-CCC---hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh-cC-C
Q 017633 6 ILFPSYLQVLAALGETMKKGT---SFG-APC---LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-TG-R 75 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~---~~~-~~~---~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~-~~-~ 75 (368)
..|.-+|.|.+++.+++.... +.. +.. ...++.++.++++.+ ++++|+||+++||++.++++-.... .. .
T Consensus 51 at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~ 130 (428)
T KOG1549|consen 51 ATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKT 130 (428)
T ss_pred cCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccc
Confidence 456678999999999887631 111 222 225678888999998 6777999999999999999654332 21 2
Q ss_pred c-eEEEEcCCCCCCch-hhhhhcCCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 76 E-RIIKFEGCYHGHAD-PFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 76 ~-~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
+ .||... .-|.... ....+...++.+..+|. ..+.. |.+.+++.++ ++|+++.+..++++
T Consensus 131 ~k~iitl~-~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~-------------d~~~~~~~i~---~~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 131 KKHIITLQ-TEHPCVLDSCRALQEEGLEVTYLPVEDSGLV-------------DISKLREAIR---SKTRLVSIMHVNNE 193 (428)
T ss_pred cceEEEec-ccCcchhHHHHHHHhcCeEEEEeccCccccc-------------cHHHHHHhcC---CCceEEEEEecccC
Confidence 3 455555 4555443 33333333332222221 22222 7899999998 68999999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccC-CccceeeeehH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGG-GLPVGAYGGRR 223 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~-G~~iG~v~~~~ 223 (368)
.|.+.| +++|..+|+++++.+++|.+|+ .|.. ..+--++.+|++++| |.+|+ | +|++.+++
T Consensus 194 ~gv~~P----v~EI~~icr~~~v~v~~DaAQa---vG~i-~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 194 IGVLQP----VKEIVKICREEGVQVHVDAAQA---VGKI-PVDVQELNADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred cccccc----HHHHHHHhCcCCcEEEeehhhh---cCCc-cccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence 999999 9999999999999999999996 4442 334445566888877 98884 4 99988875
No 303
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.1e-16 Score=147.02 Aligned_cols=221 Identities=15% Similarity=0.117 Sum_probs=141.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
..++....|.+.++++.+. +..++++||+.|+..++..+ ..++|.|++..+.|++........
T Consensus 61 ~~~p~~~~Le~~lA~leg~-~~al~~~sG~~Ai~~al~~l--l~~GD~Vlv~~~~y~~t~~~~~~~-------------- 123 (431)
T PRK08248 61 IMNPTTDVFEKRIAALEGG-IGALAVSSGQAAITYSILNI--ASAGDEIVSSSSLYGGTYNLFAHT-------------- 123 (431)
T ss_pred CCCchHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCchhhHHHHHHHH--------------
Confidence 3456688999999999864 56778889999999998655 356788999888777653322111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.+++.++..|+++++++++ +++++++++..+|++|.+.+ +++|+++|+++|+++|+|++++. +
T Consensus 124 --~~~~Gv~v~~vd~~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~---~ 191 (431)
T PRK08248 124 --LPKLGITVKFVDPSDPENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS---P 191 (431)
T ss_pred --HHhCCEEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc---c
Confidence 011223344455558999999987 46788888877777888888 99999999999999999999851 1
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccceeeee-hHHH-H----------------------HHhc-------CCCCccc
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGG-RRDI-M----------------------EMVA-------PAGPMYQ 237 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~-~~~~-~----------------------~~~~-------~~~~~~~ 237 (368)
.......++.+.-+.|++|.++| |.++|++++ +.+. . +.+. .......
T Consensus 192 ~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (431)
T PRK08248 192 YLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLR 271 (431)
T ss_pred ccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHH
Confidence 11111123443334578899994 678888755 3321 0 0000 0000001
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
......++..+......++.+ +-..++..+++..+.+.|++.
T Consensus 272 ~~G~~l~p~~a~l~~rgl~tl--~~R~~~~~~nA~~la~~L~~~ 313 (431)
T PRK08248 272 DLGAALSPFNSFLLLQGLETL--HLRMERHSENALAVAKFLEEH 313 (431)
T ss_pred hcCCCCCHHHHHHHhcCcCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 112345666666666555544 334567777777777777653
No 304
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.74 E-value=2.5e-15 Score=140.54 Aligned_cols=321 Identities=17% Similarity=0.172 Sum_probs=178.9
Q ss_pred CCcHHHHHHHHHHH--HcCCCCCC--CC----hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH--hcC----
Q 017633 9 PSYLQVLAALGETM--KKGTSFGA--PC----LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--FTG---- 74 (368)
Q Consensus 9 ~~~~~v~~a~~~~~--~~~~~~~~--~~----~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~--~~~---- 74 (368)
+.+|.+++++.+.. .+.+.|.. .. +...++.++++++++-....++.++|+.+...++.+++. ..+
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~ 160 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTK 160 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCC
Confidence 46778888887752 22222211 11 456677777888776224455555676666554433222 122
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+++|++.++.| ..+...+...|..+....... .+.. |+++|++.++ ++++++++...+ ++|
T Consensus 161 ~~~Vlv~~~~h-p~~~~~~~~~G~~vv~v~~~~-~~~~-------------D~e~L~~~i~---~~t~~V~v~~Pn-~tG 221 (481)
T PRK04366 161 RTEVIVPDSAH-GTNPASAAMAGFKVVEIPSNE-DGLV-------------DLEALKAAVG---EDTAALMLTNPN-TLG 221 (481)
T ss_pred CCEEEEcCCcc-HhHHHHHHHcCCEEEEeecCC-CCCc-------------CHHHHHhhcc---cCCeEEEEeCCC-Ccc
Confidence 23777776655 444444555454443322211 1111 8999999886 356666664433 456
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhh--hhhhcc-----CCccceeeeehHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIG-----GGLPVGAYGGRRDIME 227 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s--~sK~~~-----~G~~iG~v~~~~~~~~ 227 (368)
.+ ..+ +++|+++|+++|+++++|+++.--..+.. ....+| .|+++ ..|+|+ ||..+|++.+++++.+
T Consensus 222 ~~--~~d-l~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~ 295 (481)
T PRK04366 222 LF--ERN-ILEIAEIVHEAGGLLYYDGANLNAILGKA-RPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAP 295 (481)
T ss_pred cc--chH-HHHHHHHHHHcCCEEEEEecChhhhcccC-CccccC--CCEEEEechhhcCCCCCCCCCCeeeeeehhhhHh
Confidence 44 212 99999999999999999999841111211 222334 46654 459987 3456788888888887
Q ss_pred HhcCC-----C-Ccc----------ccccCCCCHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCc
Q 017633 228 MVAPA-----G-PMY----------QAGTLSGNPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHA 288 (368)
Q Consensus 228 ~~~~~-----~-~~~----------~~~t~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~ 288 (368)
.+... + .+. ..-.++.+.+.+.++...+..+..+++ .++...+.++++++|+++ ....
T Consensus 296 ~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~~~ 372 (481)
T PRK04366 296 FLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YDLP 372 (481)
T ss_pred hCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---Cccc
Confidence 76421 0 000 011112233445555555555544544 345566788888888775 2211
Q ss_pred eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-----cc--ccccCCCHHHHHHHHHHH
Q 017633 289 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-----AG--FTSLAHSSDDIQHTITAA 361 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-----~~--~~~~~~~~~~i~~~~~~l 361 (368)
. .. ..+..+.+....+ . ..+....++.+.|.++||.+.....+ .+ ++....+++|++++++.|
T Consensus 373 ~--~~-~~~~~~~~~~~~~---~----~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l 442 (481)
T PRK04366 373 Y--DR-PCMHEFVLSGKKL---K----ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAM 442 (481)
T ss_pred C--CC-CeeEEEEEECccc---c----ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence 1 11 1111111111000 0 01223578999999999998733221 22 345677999999999999
Q ss_pred HHHHhh
Q 017633 362 EKVLRQ 367 (368)
Q Consensus 362 ~~~l~~ 367 (368)
+++.++
T Consensus 443 ~~i~~~ 448 (481)
T PRK04366 443 KQIAEE 448 (481)
T ss_pred HHHHHH
Confidence 988754
No 305
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.5e-16 Score=146.37 Aligned_cols=218 Identities=18% Similarity=0.183 Sum_probs=142.7
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
+.+...+|++.++++.+.. ..++++||+.|+..++..+ ..+++.||+....|++........
T Consensus 61 ~~p~~~~le~~lA~l~g~~-~al~~~SG~~Ai~~al~al--l~pGd~VIv~~~~y~~t~~~~~~~--------------- 122 (427)
T PRK05994 61 TNPTNAVLEERVAALEGGT-AALAVASGHAAQFLVFHTL--LQPGDEFIAARKLYGGSINQFGHA--------------- 122 (427)
T ss_pred CCccHHHHHHHHHHHhCCC-cEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCcchhHHHHHHHH---------------
Confidence 3456788999999998754 4777789999999998766 356789999998888753221110
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
....+..++.++..|+++++++++ ++++++++++.+|++|.+.+ +++|.++|++||+++|+|++|+. +.
T Consensus 123 -~~~~G~~v~~vd~~d~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~---~~ 191 (427)
T PRK05994 123 -FKSFGWQVRWADADDPASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS---PY 191 (427)
T ss_pred -HHhcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc---cc
Confidence 001122334444458999999987 47889999888888898888 99999999999999999999952 11
Q ss_pred CccccccCCCcchh--hhhhhccC-Cccceeeee-hHH-----------------------HHHHhc-------CCCCcc
Q 017633 191 GGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG-RRD-----------------------IMEMVA-------PAGPMY 236 (368)
Q Consensus 191 ~~~~~~~~~~~di~--s~sK~~~~-G~~iG~v~~-~~~-----------------------~~~~~~-------~~~~~~ 236 (368)
........+|++ |++|.++| |-.+|.+++ ... +.+.+. ......
T Consensus 192 --~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (427)
T PRK05994 192 --LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGL 269 (427)
T ss_pred --cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHH
Confidence 122233455654 67899984 334554433 111 111100 000001
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
.......++..++.++..++.+ +.+.++..+++..+.+.|++.
T Consensus 270 ~~~G~~~~~~~A~l~~~~l~tL--~~r~~~~~~~a~~la~~L~~~ 312 (427)
T PRK05994 270 RDLGPAISPFNAFLILTGIETL--PLRMQRHSDNALAVAEWLKGH 312 (427)
T ss_pred HhcCCCCCHHHHHHHHcCcccH--HHHHHHHHHHHHHHHHHHHhC
Confidence 1122246777777777777655 445677777888888887654
No 306
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=2.6e-15 Score=139.79 Aligned_cols=317 Identities=15% Similarity=0.082 Sum_probs=175.2
Q ss_pred CcHHHHHHHHHHHHcCC-------CCCCCChhHHH----HHHHHHhhCC-CCCeEEEe---CChHHHHHHHHHHHHHhcC
Q 017633 10 SYLQVLAALGETMKKGT-------SFGAPCLLENV----LAEMVISAVP-SIEMVRFV---NSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~-------~~~~~~~~~~~----l~~~l~~~~~-~~~~v~~~---~~gt~a~~~al~~~~~~~~ 74 (368)
-+|.+++++...+.+.. .+....+.... .++.+++.++ +.+.+.++ +||++++..++... ..+
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al--~~~ 123 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL--LQP 123 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh--cCC
Confidence 46778888877765521 11111222222 4557888887 55666566 78999999988666 345
Q ss_pred CceEEEEcCCCCCCchhhh-hhcCCCccccCCCCCCCCCCCCCCcccccC-----CCCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 75 RERIIKFEGCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAP-----FNDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
++.|++.+.. |+...... .....+... . ....++..++ .-|++++++.+++. +++.+++.
T Consensus 124 gd~Ii~~~~e-hg~~l~~~~~l~~~~~~~------~----~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~- 189 (452)
T PTZ00094 124 HDRIMGLDLP-SGGHLTHGFYTAKKKVSA------T----SIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG- 189 (452)
T ss_pred CCEEEecccc-cCCccccccccccccccc------c----eeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe-
Confidence 6778775443 44322211 110000000 0 0000000111 11899999999753 34445542
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-chhcccCccccccCCCcchhhh--hhhccCCccceeeeehHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~g~~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~~~~~ 225 (368)
.++.|...+ +++|.++|+++|+++++|++|+ |...+........ ..|++++ .|++.|.. .|++++++++
T Consensus 190 -~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~-Gg~l~~~~~~ 261 (452)
T PTZ00094 190 -ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR-SGLIFYRKKV 261 (452)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC--CCcEEEcCCccCCCCCC-ceEEEEeccc
Confidence 345677888 9999999999999999999994 3311111111111 3576654 59997544 4777776654
Q ss_pred HHHhcCC-C-CccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ccceEE
Q 017633 226 MEMVAPA-G-PMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFG 299 (368)
Q Consensus 226 ~~~~~~~-~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~ 299 (368)
.+.+... . ..+-...-++++...++..++++.+... .+.+++.++.+++++.|.+. +......+ ......
T Consensus 262 ~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~----g~~v~~~~~~~~~~~ 337 (452)
T PTZ00094 262 KPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR----GYDLVTGGTDNHLVL 337 (452)
T ss_pred chHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCCCceEe
Confidence 3332210 0 0100111145667777788888887543 35566777777777776552 32221111 112233
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC---------CCcccc--c----cCCCHHHHHHHHHHHHHH
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFT--S----LAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------~~~~~~--~----~~~~~~~i~~~~~~l~~~ 364 (368)
+.+.. ...+..++...|.++||.+...+ .+.+|+ + ..++++|++++++.|.++
T Consensus 338 v~~~~------------~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~ 405 (452)
T PTZ00094 338 VDLRP------------FGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA 405 (452)
T ss_pred ecCCc------------CCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 33321 12234677888877899995321 122343 2 233599999999999988
Q ss_pred Hh
Q 017633 365 LR 366 (368)
Q Consensus 365 l~ 366 (368)
+.
T Consensus 406 ~~ 407 (452)
T PTZ00094 406 VK 407 (452)
T ss_pred HH
Confidence 75
No 307
>PRK02769 histidine decarboxylase; Provisional
Probab=99.73 E-value=4.5e-15 Score=134.00 Aligned_cols=289 Identities=16% Similarity=0.096 Sum_probs=179.2
Q ss_pred ChhHHHHHHHHHhhCC-CCC--eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 32 CLLENVLAEMVISAVP-SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~~~--~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.+.+.+..++++++++ +.+ ..++|+|||+++..++..++...+++. |+.+..-|.+...+....+.+........
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~-ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~- 141 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGT-LYYSKDTHYSVSKIARLLRIKSRVITSLP- 141 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcE-EEeCCCceehHHHHHHHcCCCCceeccCC-
Confidence 3567788899999987 333 358899999999999887765544444 45555666666655555544332221111
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC---CEEEEehhhhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG---ALLIFDEVMTG 185 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~---~~li~De~~~~ 185 (368)
.+.. |+++|++.+++...++.++++...++++|.+.| +++|+++|++|| +++++|.+|.+
T Consensus 142 ~g~i-------------d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 142 NGEI-------------DYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred CCcC-------------cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 1111 899999999864345888888888888999999 999999999998 69999999976
Q ss_pred h-hc--ccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcCCCCccc--cccC--CCCHHHHHHHHHHHH
Q 017633 186 F-RL--AYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTL--SGNPLAMTAGIHTLK 256 (368)
Q Consensus 186 ~-~~--g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~~~~~~~--~~t~--~~~~~~~~a~~~~l~ 256 (368)
+ .. .....++... ..|.+++| |.+++..++|.++.+++..+.+.....+.. ..++ +.+..+..+..++++
T Consensus 205 ~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~ 283 (380)
T PRK02769 205 MILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIR 283 (380)
T ss_pred eeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHH
Confidence 4 10 0100111111 45777666 877767889999888776665542211111 1122 234456677778888
Q ss_pred HHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCe
Q 017633 257 RLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 333 (368)
Q Consensus 257 ~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 333 (368)
.+..++ ..++..++.+++.++|++ .+......+....+.|.. +. .++ . +|.
T Consensus 284 ~lg~~G~~~~~~~~~~la~~l~~~L~~----~g~~~~~~p~~~~v~f~~-------------~~----~~~----~-~~w 337 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQA----NGIPAWRNPNSITVVFPC-------------PS----ERI----W-KKW 337 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEEcCCCceEEEEcC-------------CC----HHH----H-hCe
Confidence 776544 345566666666666654 343323333333333321 11 112 1 555
Q ss_pred eecCCCC-CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 334 YFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 334 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.+... -++++...++++.++++++.|...+.
T Consensus 338 ~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 338 HLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 5554432 22344556788999999999987753
No 308
>PLN02509 cystathionine beta-lyase
Probab=99.73 E-value=1.5e-16 Score=146.38 Aligned_cols=210 Identities=13% Similarity=0.156 Sum_probs=139.7
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh---hhhcCCCccccCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDS 108 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 108 (368)
++...+++++++++.+ .+..++++||+.++..++.+ ..++|.||+..+.|+++.... +...|.
T Consensus 132 npt~~aLE~~lA~leg-~e~ai~~~SG~aAi~~il~l---l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~---------- 197 (464)
T PLN02509 132 NPTRDALESLLAKLDK-ADRAFCFTSGMAALSAVTHL---IKNGEEIVAGDDVYGGSDRLLSQVVPRSGV---------- 197 (464)
T ss_pred CHHHHHHHHHHHHHhC-CCEEEEeCcHHHHHHHHHHH---hCCCCEEEEcCCchhhHHHHHHHHHHHCCe----------
Confidence 4668889999999875 45667777899887655543 357889999888876643211 111122
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
++..++..|+++++++++ +++++++++.++|++|.+.+ +++|+++|++||+++|+|++|...
T Consensus 198 ---------~v~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~-- 259 (464)
T PLN02509 198 ---------VVKRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSP-- 259 (464)
T ss_pred ---------EEEEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccc--
Confidence 233334447899998886 46888988888888888776 999999999999999999999421
Q ss_pred ccCccccccCCCcch--hhhhhhccC-C-ccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCH
Q 017633 189 AYGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 263 (368)
Q Consensus 189 g~~~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~ 263 (368)
.. ....+...|+ .|++|.++| | .-.|+++++ +.+.+.+... ........++..++.++..++.+ +..
T Consensus 260 -~~--~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~---~~~~g~~l~p~~A~l~lr~L~tL--~~R 331 (464)
T PLN02509 260 -VL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL---QNSEGSGLAPFDCWLCLRGIKTM--ALR 331 (464)
T ss_pred -cc--CChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHH---HHhcCCCcCHHHHHHHHhhhhhH--HHH
Confidence 11 1112233454 578899985 3 446677654 4444433211 01111235777888888888766 445
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017633 264 YEYLNKITGELTQGIIDA 281 (368)
Q Consensus 264 ~~~~~~~~~~l~~~l~~~ 281 (368)
.++..++++++.+.|++.
T Consensus 332 ~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 332 IEKQQENARKIAMYLSSH 349 (464)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 677888888888888753
No 309
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=1.9e-16 Score=144.42 Aligned_cols=214 Identities=13% Similarity=0.081 Sum_probs=141.8
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh---hhhcCCCccccCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDS 108 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 108 (368)
.+...+|++.++++.+.. ..+.++||+.|+..++..+ ..++|.||+.+..|.+..... +...|.
T Consensus 60 nPtv~~lE~~la~leg~~-~av~~~SG~aAi~~al~al--l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi---------- 126 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV-GAVATASGQAAIMLAVLNI--CSSGDHLLCSSTVYGGTFNLFGVSLRKLGI---------- 126 (432)
T ss_pred CcHHHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHh--cCCCCEEEECCCchHHHHHHHHHHHHHCCC----------
Confidence 567889999999998654 4677889999999999755 357889999998887754331 121222
Q ss_pred CCCCCCCCCcccccCCC-CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchh
Q 017633 109 PGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 187 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~-d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~ 187 (368)
++..++.+ |+++++++++ +++++|+++...++.+.+.+ +++|+++|++||+++|+|+++.
T Consensus 127 ---------~v~~vd~~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~--- 187 (432)
T PRK06702 127 ---------DVTFFNPNLTADEIVALAN---DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA--- 187 (432)
T ss_pred ---------EEEEECCCCCHHHHHHhCC---cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC---
Confidence 22333332 8899999998 57889999987777788888 9999999999999999999984
Q ss_pred cccCccccccCCCcc--hhhhhhhccC-Cccce-eeeeh----------HHHHH-----------------H-h-cCCCC
Q 017633 188 LAYGGAQEYFGVTPD--LTTLGKIIGG-GLPVG-AYGGR----------RDIME-----------------M-V-APAGP 234 (368)
Q Consensus 188 ~g~~~~~~~~~~~~d--i~s~sK~~~~-G~~iG-~v~~~----------~~~~~-----------------~-~-~~~~~ 234 (368)
.....+.+....| +.|+||.++| +--+| .++.. ..+.+ . + +....
T Consensus 188 --tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
T PRK06702 188 --TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ 265 (432)
T ss_pred --chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHH
Confidence 2233443444445 4588998874 22222 22211 11110 0 0 00000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
.......+.++..+..++..++.+ +...++..+++..+.+.|++.
T Consensus 266 ~~~~~g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 266 LLRDYGNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHHHccCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 111233477888888888887755 345666777888887777764
No 310
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1.3e-16 Score=143.89 Aligned_cols=217 Identities=13% Similarity=0.055 Sum_probs=144.2
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++....|++.++.+.++.+.+ +++||++|+..++... ..++|.||+.++.|+++........
T Consensus 62 gnPt~~~Le~~la~le~~~~~v-~~sSG~aAi~~~l~al--l~~GD~Vlv~~~~Y~~~~~l~~~~l-------------- 124 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTI-LVPSGLAAVTVPFLGF--LSPGDHALIVDSVYYPTRHFCDTML-------------- 124 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEE-EECcHHHHHHHHHHHh--cCCCCEEEEccCCcHHHHHHHHHHH--------------
Confidence 4567788999999887655555 4556999999998655 3678999999988887543211110
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
...+.++..++..+.++++++++ +++++++++.+.|+.+.+.+ +++|+++|+++|+++++|++|+.. .
T Consensus 125 --~~~Gi~v~~vd~~~~e~l~~al~---~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p---~ 192 (395)
T PRK05967 125 --KRLGVEVEYYDPEIGAGIAKLMR---PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP---L 192 (395)
T ss_pred --HhcCeEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc---e
Confidence 11122233333335677888887 46899999977777666666 999999999999999999999622 1
Q ss_pred CccccccCCCcchhhhhhhccC--CccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 268 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 268 (368)
......+|.+.-+.|.+|.++| ....|+++.++++++.+.. .........++..+...+..++.+ .-..++..
T Consensus 193 ~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~---~~~~~G~~~~p~da~l~~rgl~Tl--~lR~~~~~ 267 (395)
T PRK05967 193 YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLE---AHGTLGLCAGPDDTYQILRGLRTM--GIRLEHHR 267 (395)
T ss_pred ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHH---HHHHcCCCCCHHHHHHHHcCcccH--HHHHHHHH
Confidence 1112224443334578899985 3778877778776665541 111122246777777766666655 33456677
Q ss_pred HHHHHHHHHHHHH
Q 017633 269 KITGELTQGIIDA 281 (368)
Q Consensus 269 ~~~~~l~~~l~~~ 281 (368)
+++..+.+.|++.
T Consensus 268 ~na~~lA~~L~~h 280 (395)
T PRK05967 268 KSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHhC
Confidence 7777777777763
No 311
>PLN03032 serine decarboxylase; Provisional
Probab=99.73 E-value=5.6e-15 Score=132.38 Aligned_cols=305 Identities=15% Similarity=0.053 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHcCCC-----CC---CCChhHHHHHHHHHhhCC-CCCeE--EEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 13 QVLAALGETMKKGTS-----FG---APCLLENVLAEMVISAVP-SIEMV--RFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 13 ~v~~a~~~~~~~~~~-----~~---~~~~~~~~l~~~l~~~~~-~~~~v--~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..++++.+.+.+... +. ...+.+.++.++++++++ +++.+ +||+|||+|+..++..++...++ .+++.
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~vi~ 116 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD-GILYA 116 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEEEe
Confidence 466777666654211 11 124678889999999997 44544 99999999999999887654333 46677
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+..-|.+...++...+.++...+.... +.. |+++|+++++++...+.++++...++++|.+.|
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~i-------------d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp--- 179 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLPS-GEI-------------DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD--- 179 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCCC-CcC-------------cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---
Confidence 778888777776665554433222111 111 899999999854335777778777778898888
Q ss_pred HHHHHHHHHHHhC-----CEEEEehhhhch-h--ccc--CccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHh
Q 017633 162 FLNAIRRITKENG-----ALLIFDEVMTGF-R--LAY--GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 162 ~l~~i~~l~~~~~-----~~li~De~~~~~-~--~g~--~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~ 229 (368)
+++|+++|++|| +++++|.++.++ . ... .+.+ ....|.+++| |..+...++|.++.+++..+.+
T Consensus 180 -i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~ 255 (374)
T PLN03032 180 -LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKAL 255 (374)
T ss_pred -HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhHhh
Confidence 999999999997 589999999654 1 110 1111 1235666666 7666578899998887766655
Q ss_pred cCCCCccc--cccCCCC--HHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 230 APAGPMYQ--AGTLSGN--PLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 230 ~~~~~~~~--~~t~~~~--~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
.....+.. ..|..++ ......+..+++.+..++ +.++..++++++.++|++. +......+....+.|..
T Consensus 256 ~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~~V~f~~ 331 (374)
T PLN03032 256 SQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSSTVVFER 331 (374)
T ss_pred ccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCceEEEEcC
Confidence 43222111 1223333 344566666777666544 4566667777777777663 43333333333333321
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-CccccccCCCHHHHHHHHHHHHHH
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
+. ... ..+|..+.+... -++++....+.+.++++++.|++.
T Consensus 332 -------------~~---~~~-----~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 332 -------------PM---DEA-----FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred -------------CC---cHh-----HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 11 011 224555544322 123334456789999999988753
No 312
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.73 E-value=4.1e-15 Score=136.07 Aligned_cols=326 Identities=13% Similarity=-0.006 Sum_probs=193.2
Q ss_pred CCCcHHHHHHHHHHHHcCC----CCCCCChhHHHHHHHHHhhCC-C-C-CeEEE--eCChHHHHHHHHHHHHHh--c---
Q 017633 8 FPSYLQVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVP-S-I-EMVRF--VNSGTEACMGVLRLARAF--T--- 73 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~-~-~-~~v~~--~~~gt~a~~~al~~~~~~--~--- 73 (368)
+...|++.+.+.+.+.... ..+...+..++..+++++.++ + . +++.+ |+|||+|+..++..++.. .
T Consensus 51 t~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999988886421 112233778888999999987 4 2 34544 799999999999665421 0
Q ss_pred --C---CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 74 --G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 74 --~---~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
+ ...+++....-|.+...+....+.++...+.....+.. |+++|+++++ +++.+|++..
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~v-------------d~~~L~~~i~---~~t~lV~~t~ 194 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVI-------------DPEQVVEAVD---ENTIGVVCIL 194 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceee-------------CHHHHHHHHh---hCCeEEEEEe
Confidence 1 12356667777776665555444433332222111111 8999999998 4678888888
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHh------CCEEEEehhhhch-h---cccC-ccccccCCCcchhhhh--hhccCCcc
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R---LAYG-GAQEYFGVTPDLTTLG--KIIGGGLP 215 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~-~---~g~~-~~~~~~~~~~di~s~s--K~~~~G~~ 215 (368)
.++++|.+.| +++|+++|+++ |+++++|.+|.++ . .+.. ..+. ....|.+++| |...+...
T Consensus 195 g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~P~g 268 (431)
T TIGR01788 195 GTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLVYPG 268 (431)
T ss_pred CCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCCCCC
Confidence 8888999999 99999999999 9999999999764 1 1221 1111 1234666666 87656678
Q ss_pred ceeeeehHH--HHHHhcCCCCccc----cccCCCCH--HHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHh
Q 017633 216 VGAYGGRRD--IMEMVAPAGPMYQ----AGTLSGNP--LAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKK 284 (368)
Q Consensus 216 iG~v~~~~~--~~~~~~~~~~~~~----~~t~~~~~--~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~ 284 (368)
+|+++.+++ +.+.+.....+.. ..+...+. .........+..+...+ ..++..++.+++.++|++
T Consensus 269 ~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~---- 344 (431)
T TIGR01788 269 VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK---- 344 (431)
T ss_pred cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 999877543 3333321100110 01122221 12233344444444433 344455555555555544
Q ss_pred cC-CceEEe-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Cccc--cccCCCHHH
Q 017633 285 AG-HAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGF--TSLAHSSDD 353 (368)
Q Consensus 285 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~--~~~~~~~~~ 353 (368)
.+ +....+ ...+++.|.+.... ....+..++.+.|.++|+.+..... ...+ +....+++.
T Consensus 345 ~~~~el~~~~~~~~iV~Fr~~~~~---------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~ 415 (431)
T TIGR01788 345 LGPFEIISDGSGIPLVAFKLKDDA---------DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDL 415 (431)
T ss_pred CCCEEEeeCCCCceEEEEEeCCCC---------CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHH
Confidence 33 222221 23445555553210 0122357889999999987533221 1122 234567899
Q ss_pred HHHHHHHHHHHHhhC
Q 017633 354 IQHTITAAEKVLRQI 368 (368)
Q Consensus 354 i~~~~~~l~~~l~~~ 368 (368)
++++++.|+.++.++
T Consensus 416 ~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 416 AELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988653
No 313
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=5.5e-16 Score=141.14 Aligned_cols=162 Identities=16% Similarity=0.200 Sum_probs=113.8
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++...+|+++++++.+.... ++++||+.|+..++... ..++|+|++.+..|+++.........
T Consensus 45 g~p~~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~al--l~~Gd~Vv~~~~~y~~t~~~~~~l~~------------- 108 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTL--LRAGDHLVSSQFLFGNTNSLFGTLRG------------- 108 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHH--cCCCCEEEECCCccccHHHHHHHHHh-------------
Confidence 456788999999999876554 55557999999988655 35778898887766554322111111
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
.+.++..++..|+++++++++ +++++++++.++|++|.+.+ +++|+++|++||+++|+|++|.. +.
T Consensus 109 ----~G~~v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~---~~ 174 (397)
T PRK05939 109 ----LGVEVTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTS---PW 174 (397)
T ss_pred ----cCCEEEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCccc---cc
Confidence 122334444448999999997 57889999888888888877 99999999999999999999951 11
Q ss_pred CccccccCCCcchhhhhhhccC-Cccceeeeeh
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGGR 222 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~~ 222 (368)
.+....++.+..+.|+||.++| |.++|+++..
T Consensus 175 ~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 175 LFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred ccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 1111123443345689999996 7889987663
No 314
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.72 E-value=5.9e-16 Score=131.88 Aligned_cols=163 Identities=19% Similarity=0.159 Sum_probs=127.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
..++....|.++++.+-++... +.+.||+.|...++... ...+|+|+..+.-|.|++..+...
T Consensus 59 i~NPT~~vlE~RiAaLEGG~aa-~a~aSG~AA~~~ai~~l--a~aGD~iVss~~LYGGT~~lf~~t-------------- 121 (426)
T COG2873 59 IMNPTTDVLEERIAALEGGVAA-LAVASGQAAITYAILNL--AGAGDNIVSSSKLYGGTYNLFSHT-------------- 121 (426)
T ss_pred ccCchHHHHHHHHHHhhcchhh-hhhccchHHHHHHHHHh--ccCCCeeEeeccccCchHHHHHHH--------------
Confidence 4567788999999998876544 44558999999999655 257899999888888865433221
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
.+..+.++..++.+|++.++++|+ ++++++++|...|+.+.+.+ +++|+++|++||++||+|...+
T Consensus 122 --l~~~Gi~v~fvd~~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~a----- 187 (426)
T COG2873 122 --LKRLGIEVRFVDPDDPENFEAAID---ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFA----- 187 (426)
T ss_pred --HHhcCcEEEEeCCCCHHHHHHHhC---cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCC-----
Confidence 223455677787779999999998 68999999999999999999 9999999999999999998885
Q ss_pred cCccccccCCCcchh--hhhhhccC-CccceeeeehH
Q 017633 190 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRR 223 (368)
Q Consensus 190 ~~~~~~~~~~~~di~--s~sK~~~~-G~~iG~v~~~~ 223 (368)
+.+.+..+....|++ |.+|.++| |--||.+++..
T Consensus 188 tpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 188 TPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred cceecchhhcCCCEEEEeecccccCCccccceEEEeC
Confidence 234556666677776 68899996 77788876654
No 315
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=3.3e-16 Score=142.03 Aligned_cols=216 Identities=17% Similarity=0.098 Sum_probs=138.4
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+.++...+|++.++++.+... .++++||+.++..++.++ .++++|++.++.|.+.........
T Consensus 47 ~~~p~~~~Le~~lA~l~g~~~-~~~~~sG~aai~~~~~~l---~~Gd~Viv~~~~y~~~~~~~~~~~------------- 109 (377)
T PRK07671 47 TGNPTRAALEELIAVLEGGHA-GFAFGSGMAAITAVMMLF---SSGDHVILTDDVYGGTYRVMTKVL------------- 109 (377)
T ss_pred CCChHHHHHHHHHHHHhCCCc-eEEeCCHHHHHHHHHHHh---CCCCEEEECCCccchHHHHHHHHH-------------
Confidence 456778999999999987544 456777998887665432 567899998888776543222111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++..|+++++++++ +++++++++..+|++|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 110 ---~~~G~~v~~v~~~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~~~~ 179 (377)
T PRK07671 110 ---NRFGIEHTFVDTSNLEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTPYWQ 179 (377)
T ss_pred ---hcCCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 01122334444448999999997 46788888777777788777 999999999999999999999532111
Q ss_pred cCccccccCCCcchhhhhhhccCC--ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~G--~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.. . .++.+.-+.|+||.++|. .-.|++++ ++++++.+.. .........++..+..++..++.+ +-..++
T Consensus 180 ~p--~-~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~---~~~~~g~~~~~~~a~l~~~~l~tl--~~R~~~ 251 (377)
T PRK07671 180 SP--I-SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF---VQNSTGGILGPQDSWLLLRGLKTL--GIRMEE 251 (377)
T ss_pred Ch--h-hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH---HHHhhcCCCCHHHHHHHHcCcChH--HHHHHH
Confidence 11 1 123323345788999842 34565655 5667666652 112222245666666665555544 224566
Q ss_pred HHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIID 280 (368)
Q Consensus 267 ~~~~~~~l~~~l~~ 280 (368)
..++.+.+.+.|++
T Consensus 252 ~~~na~~la~~L~~ 265 (377)
T PRK07671 252 HETNSRAIAEFLNN 265 (377)
T ss_pred HHHHHHHHHHHHHc
Confidence 66777777777665
No 316
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.71 E-value=7.7e-17 Score=141.83 Aligned_cols=230 Identities=14% Similarity=0.048 Sum_probs=138.5
Q ss_pred CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 29 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
-.|.....++++.++++++..+.+++++|+++++..++..+ ..+++.|++..+.+ .+....+...|...........
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al--~~~gd~Vlv~~~~h-~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAV--CGPGDKILIDRNCH-KSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred CCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHc--CCCCCEEEEeCCch-HHHHHHHHHCCCEEEEecCccC
Confidence 34677888999999999975455556888889999888665 35677888876554 4444445554443322111111
Q ss_pred CCCCCCCCCcccccC-CCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 109 PGVPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~-~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
.. ..+. .-|++++++++++++ +++++++... +.+|.+.+ +++|+++|++||+++|+||+|...
T Consensus 132 ~~---------~~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 132 PY---------YGIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred cc---------cCcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhh
Confidence 10 0000 117999999998643 4554444322 34688787 999999999999999999999542
Q ss_pred -hcccC-ccccccCCCcchhhhhhhccCCccceee-eehHHH--HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-
Q 017633 187 -RLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVGAY-GGRRDI--MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE- 260 (368)
Q Consensus 187 -~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG~v-~~~~~~--~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~- 260 (368)
..+.. .....++.+.-+.|++|++ +|++.|++ ..+++. .+.+.. ......+.+++.+.+++...+++.+..
T Consensus 197 ~~~~~~~~~~~~~~~div~~S~hK~l-~g~~~~~~l~~~~~~~~~~~~~~--~~~~~~ttsps~~~~asl~~a~~~~~~~ 273 (294)
T cd00615 197 RFHPILPSSAAMAGADIVVQSTHKTL-PALTQGSMIHVKGDLVNPDRVNE--ALNLHQSTSPSYLILASLDVARAMMALE 273 (294)
T ss_pred ccCcccCcchhhcCCcEEEEchhccc-chHhHHHHHHhCCCcCCHHHHHH--HHHHHCCCCcHHHHHHHHHHHHHHHHHH
Confidence 22211 1112233333345788987 45665544 444331 122221 112234456777777787788776643
Q ss_pred -CCHHHHHHHHHHHHHHHHH
Q 017633 261 -PGTYEYLNKITGELTQGII 279 (368)
Q Consensus 261 -~~~~~~~~~~~~~l~~~l~ 279 (368)
+++.++..++.+.+++++.
T Consensus 274 g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 274 GKELVEELIELALYARQEIN 293 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 3456667777777776654
No 317
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.71 E-value=4.2e-16 Score=141.34 Aligned_cols=216 Identities=15% Similarity=0.079 Sum_probs=131.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+..+...+|++.++++.+... .++++||+.|+..++.++ .++++|++.++.|++.........
T Consensus 47 ~~~p~~~~Le~~la~l~g~~~-al~~~SG~~Al~~~l~~l---~pGd~Vi~~~~~y~~t~~~~~~~~------------- 109 (380)
T PRK06176 47 SGNPTRFALEELIADLEGGVK-GFAFASGLAGIHAVFSLF---QSGDHVLLGDDVYGGTFRLFDKVL------------- 109 (380)
T ss_pred CCChhHHHHHHHHHHHhCCCC-EEEECCHHHHHHHHHHHc---CCCCEEEEcCCChhHHHHHHHHHH-------------
Confidence 345668899999999987544 456678999998666433 567899998887766532221110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.++..++..|+++++++++ +++++++++..++++|.+.+ +++|.++|++||+++|+|++|+....+
T Consensus 110 ---~~~gi~v~~vd~~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~~~~ 179 (380)
T PRK06176 110 ---VKNGLSCTIIDTSDLSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATPYYQ 179 (380)
T ss_pred ---HhcCeEEEEcCCCCHHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 01122333444448999999887 46888888877777888888 999999999999999999999632111
Q ss_pred cCccccccCCCcchhhhhhhccC-C-ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.. . .++.+..+.|++|.++| | .-.|+++. ++++.+.++. .........++..+......++.+ +-..++
T Consensus 180 ~p--~-~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~---~~~~~G~~~~~~~~~l~~~gl~tl--~~R~~~ 251 (380)
T PRK06176 180 NP--L-LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF---FQNAIGGVLGPQDSWLLQRGIKTL--GLRMEA 251 (380)
T ss_pred Cc--c-ccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH---HHHHhcCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 11 1 23333334567799985 4 34666666 4556555542 111111123444444443333322 122344
Q ss_pred HHHHHHHHHHHHHH
Q 017633 267 LNKITGELTQGIID 280 (368)
Q Consensus 267 ~~~~~~~l~~~l~~ 280 (368)
..++...+.+.|++
T Consensus 252 ~~~~a~~la~~L~~ 265 (380)
T PRK06176 252 HQKNALCVAEFLEK 265 (380)
T ss_pred HHHHHHHHHHHHHh
Confidence 55555555555554
No 318
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=4.1e-16 Score=140.55 Aligned_cols=215 Identities=10% Similarity=-0.008 Sum_probs=148.6
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++....|++.++++.++ +..++++||+.|+..++... ..++|+|++....|.+.....-..
T Consensus 60 ~nPt~~~le~~la~LEg~-~~a~~~~SGmaAi~~~~~~l--l~~GD~Vv~~~~~Yg~t~~l~~~~--------------- 121 (395)
T PRK08114 60 GTLTHFSLQEAMCELEGG-AGCALYPCGAAAVANAILAF--VEQGDHVLMTGTAYEPTQDFCSKI--------------- 121 (395)
T ss_pred CChhHHHHHHHHHHHhCC-CeEEEEhHHHHHHHHHHHHH--cCCCCEEEEeCCCcHHHHHHHHHH---------------
Confidence 456788999999997754 56667778999999988654 357889998877776654332111
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CEEEEehhhhchhc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG--ALLIFDEVMTGFRL 188 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~--~~li~De~~~~~~~ 188 (368)
....+.++..++..|.++++++++ ++++++++|...|+.+.+.+ +++|+++|+++| +++++|.+++ .
T Consensus 122 -l~~~Gi~v~~vd~~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a---~ 190 (395)
T PRK08114 122 -LSKLGVTTTWFDPLIGADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA---A 190 (395)
T ss_pred -HHhcCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc---c
Confidence 011122344454458899999997 47899999999999999999 999999999985 9999999995 3
Q ss_pred ccCccccccCCCcchh--hhhhhccCC--ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 189 AYGGAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 189 g~~~~~~~~~~~~di~--s~sK~~~~G--~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
+.. ++......|++ |.+|.++|. ...|.++.+++.++.+... ........++..+......++.+ .-..
T Consensus 191 p~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~---~~~~G~~~~p~~a~l~~rgl~TL--~lR~ 263 (395)
T PRK08114 191 GVL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN---SYLMGQMVDADTAYMTSRGLRTL--GVRL 263 (395)
T ss_pred ccc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH---HHhccCCCCHHHHHHHHcCCCcH--HHHH
Confidence 222 33333445654 677999963 6788777777665554421 11122255677777766666544 2345
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017633 265 EYLNKITGELTQGIIDA 281 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~ 281 (368)
++..+++..+.+.|++.
T Consensus 264 ~~~~~na~~va~~L~~h 280 (395)
T PRK08114 264 RQHEESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 77778888888888764
No 319
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=7.2e-16 Score=140.54 Aligned_cols=216 Identities=11% Similarity=0.056 Sum_probs=137.9
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+...+|++.++++.+..+. ++++||+.|+..++.+. .++|+|++.++.|++.........
T Consensus 52 ~~p~~~~le~~lA~l~g~~~~-v~~~sG~~ai~~~l~~l---~~Gd~Vlv~~~~y~~~~~~~~~~~-------------- 113 (390)
T PRK08064 52 GNPTREALEDIIAELEGGTKG-FAFASGMAAISTAFLLL---SKGDHVLISEDVYGGTYRMITEVL-------------- 113 (390)
T ss_pred CChhHHHHHHHHHHHhCCCCe-EEECCHHHHHHHHHHHh---CCCCEEEEccCccchHHHHHHHHH--------------
Confidence 346688999999999875444 55578999998888532 567899998888876543222110
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
...+.++..++..|++++++.++ +++++++++..+|++|.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 114 --~~~G~~v~~v~~~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~~ 184 (390)
T PRK08064 114 --SRFGIEHTFVDMTNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPLLQK 184 (390)
T ss_pred --HHcCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcccccC
Confidence 01122344444458899998887 46888888888888888888 9999999999999999999996331001
Q ss_pred CccccccCCCcchhhhhhhccC--Cccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
.. .++.+.-+.|++|.++| |...|++++ ++++++.++. .........++..+..+...++.+ ....++.
T Consensus 185 --~~-~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~---~~~~~g~~~~~~~a~l~~~gl~tl--~~R~~~~ 256 (390)
T PRK08064 185 --PL-DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF---LQNSFGAVLGVQDCWLVLRGLKTL--HVRLEHS 256 (390)
T ss_pred --ch-hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHcccCcH--HHHHHHH
Confidence 11 23433334578899974 345677655 4677777652 112222233444444433333322 2345566
Q ss_pred HHHHHHHHHHHHHH
Q 017633 268 NKITGELTQGIIDA 281 (368)
Q Consensus 268 ~~~~~~l~~~l~~~ 281 (368)
.+++..+.+.|++.
T Consensus 257 ~~~a~~la~~L~~~ 270 (390)
T PRK08064 257 SETANKIALYLQEH 270 (390)
T ss_pred HHHHHHHHHHHhcC
Confidence 66666776666653
No 320
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.70 E-value=3.8e-16 Score=140.46 Aligned_cols=285 Identities=17% Similarity=0.150 Sum_probs=174.0
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
..++....|++.++++.++ +.+++++||+.|+..++..+ .+.+++|++....|++.....-..
T Consensus 52 ~gnPt~~~le~~la~Le~g-~~a~~~~SGmaAi~~~l~~l--l~~Gd~iv~~~~~Y~~t~~~~~~~-------------- 114 (386)
T PF01053_consen 52 YGNPTVRALEQRLAALEGG-EDALLFSSGMAAISAALLAL--LKPGDHIVASDDLYGGTYRLLEEL-------------- 114 (386)
T ss_dssp TC-HHHHHHHHHHHHHHT--SEEEEESSHHHHHHHHHHHH--S-TTBEEEEESSSSHHHHHHHHHC--------------
T ss_pred cccccHHHHHHHHHHhhcc-cceeeccchHHHHHHHHHhh--cccCCceEecCCccCcchhhhhhh--------------
Confidence 4567788999999988755 67888889999999998655 356889999988888753322211
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CEEEEehhhhchhc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~-~~li~De~~~~~~~ 188 (368)
....+.++..++..|+++++++++ ++++++++|+..|+...+.+ +++|+++|+++| +++++|++...
T Consensus 115 --l~~~gv~v~~~d~~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~at--- 182 (386)
T PF01053_consen 115 --LPRFGVEVTFVDPTDLEALEAALR---PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFAT--- 182 (386)
T ss_dssp --HHHTTSEEEEESTTSHHHHHHHHC---TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTH---
T ss_pred --hcccCcEEEEeCchhHHHHHhhcc---ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccc---
Confidence 111233455566668999999998 58999999999998888888 999999999998 99999999852
Q ss_pred ccCccccccCCCcch--hhhhhhccC-C-ccceeeeeh--HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC
Q 017633 189 AYGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGR--RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 262 (368)
Q Consensus 189 g~~~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~~--~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~ 262 (368)
....+.+....|+ .|.+|.++| + .-.|.++++ +++.+.++. .........++..+......++.+ .-
T Consensus 183 --p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~---~~~~~G~~~~p~da~ll~rgl~Tl--~~ 255 (386)
T PF01053_consen 183 --PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLRE---FRRLLGATLSPFDAWLLLRGLRTL--PL 255 (386)
T ss_dssp --TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHH---HHHHHT-B--HHHHHHHHHHHTTH--HH
T ss_pred --eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcc---hhhhcCccchHHHHHHHhcCCCcH--HH
Confidence 1223333334454 578899985 3 557777754 466665542 111122244666666666666544 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceE------------------EeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 263 TYEYLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
..++..++++.+.+.|++. +.+.. ..+.++++.|++.. .......|
T Consensus 256 R~~~~~~nA~~lA~~L~~h----p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~------------~~~~~~~f 319 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEH----PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG------------GEEAARRF 319 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTS----TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCCeEEEcccccccceeeeeecccccCceeEEEecc------------chhhhHhH
Confidence 4566777777777777663 32211 12556688888852 11245666
Q ss_pred HHHHHHcCeeecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHh
Q 017633 325 YRGMLEEGVYFAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.|.=-++..+-|+... ..+++.+.-||.+.+++.|+++++
T Consensus 320 ~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 320 LDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred HhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 666631111111121110 012345556888899999998874
No 321
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.70 E-value=5e-15 Score=134.85 Aligned_cols=308 Identities=14% Similarity=0.013 Sum_probs=176.4
Q ss_pred CcHH-HHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC--CCCeEEEeC-ChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 10 SYLQ-VLAALGETMKKGTSFG-APCLLENVLAEMVISAVP--SIEMVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 10 ~~~~-v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~--~~~~v~~~~-~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
.+|+ |++++.+......+.+ ...+...+.++.++++++ +.++++++. |||.+++.++... ..+++..++.. +
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l--~~~~~~~vi~~-g 99 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL--LGARRVDHLAW-E 99 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc--CCCCcceEEEe-C
Confidence 3456 8888876543211211 224667888888999887 345788775 9999999999655 23223333334 4
Q ss_pred CCCCchhh-h-hhcCC-CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 85 YHGHADPF-L-VKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 85 ~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.|+..... + ...+. .+.....+ .... .|+++++ .++.+.+..+.+.+|...|
T Consensus 100 ~f~~~~~~~~~~~~g~~~v~~~~~~-~g~~-------------~d~~~i~--------~~~~V~~~h~~t~tG~~~p--- 154 (378)
T PRK03080 100 SFGSKWATDVVKQLKLEDPRVLEAD-YGSL-------------PDLSAVD--------FDRDVVFTWNGTTTGVRVP--- 154 (378)
T ss_pred HHHHHHHHHHHhhcCCCCceEeccC-CCCC-------------CCHhhcC--------CCCCEEEEecCCccceecc---
Confidence 55554332 1 11122 22211111 0000 0444422 1345677777777899999
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhh--hhhccCCccceeeeehHHHHHHhcCCC--C--
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAG--P-- 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~~~~~~~~~~~~~--~-- 234 (368)
+++|++ ++||+++++|-+++ .|. ...++. .|++.+ -|++++..++|++++++++++.+.... .
T Consensus 155 -i~~I~~--~~~g~~~vVDa~qs---~G~~pidv~~----iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~ 224 (378)
T PRK03080 155 -VARWIG--ADREGLTICDATSA---AFALPLDWSK----LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPI 224 (378)
T ss_pred -chhhcc--ccCCCeEEEecccc---cccCCCCHHH----CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCC
Confidence 999999 88999999999985 222 233332 366544 499987678999999998887665311 0
Q ss_pred ---------------ccccccC-CCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCC-ceE---Ee-
Q 017633 235 ---------------MYQAGTL-SGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGH-AIC---GG- 292 (368)
Q Consensus 235 ---------------~~~~~t~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~---~~- 292 (368)
.....|. +++..+..++.++++.+.+. ++ +.+.++.+.+.+.+.+.+.+.+. ... ..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~-e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 303 (378)
T PRK03080 225 PKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGL-DALIARTAANASVLYDWAEKTPWATPLVADPAT 303 (378)
T ss_pred chhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence 0112222 33445566667888888764 43 44444444444444444333331 111 01
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC----Cccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
....++.+.+.. ++.....++...|+++|+.+..++. ..+| +..+++++|++++++.|+++++
T Consensus 304 ~s~~i~~~~~~~-----------~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~ 372 (378)
T PRK03080 304 RSNTSVTLDFVD-----------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFE 372 (378)
T ss_pred cCccEEEEEcCC-----------chHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 112344444310 0001223466777788988876432 2344 4677899999999999999886
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 373 ~ 373 (378)
T PRK03080 373 R 373 (378)
T ss_pred H
Confidence 5
No 322
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.70 E-value=5.8e-15 Score=134.47 Aligned_cols=297 Identities=11% Similarity=0.027 Sum_probs=168.2
Q ss_pred hhHHHHHHHHHhhCCC--CCeEEEeCChH-HHHHHHHHHHHHhc-CCceEEEEcCCCCCCchhhhhhcCCCccccCC--C
Q 017633 33 LLENVLAEMVISAVPS--IEMVRFVNSGT-EACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL--P 106 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~--~~~v~~~~~gt-~a~~~al~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 106 (368)
.+..++.+.++++++- ....+++++|| .++.+++..++... +++.||+...+ |.+...++...|.+...... .
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCCeEEEeeeeec
Confidence 3456677777777762 35788898999 68877776654222 35677776654 77777777776665433221 1
Q ss_pred CCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 107 DSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
...... |+++++++++... ..+.+++..|....+|...+ +++|+++|++||+++|+|++|..
T Consensus 184 ~~~~~i-------------D~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~ 246 (444)
T TIGR03531 184 GDELTT-------------DVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGL 246 (444)
T ss_pred CcCCCc-------------CHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcC
Confidence 111111 8999999998532 34445554444333334444 99999999999999999999963
Q ss_pred h--hcccCccccccCC-Ccchh--hhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHH
Q 017633 186 F--RLAYGGAQEYFGV-TPDLT--TLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 258 (368)
Q Consensus 186 ~--~~g~~~~~~~~~~-~~di~--s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~ 258 (368)
. ..... ....... ..|++ +++|.+. +|+ .|.++. ++++.+.+... +.+.. .+..++.+...++..-
T Consensus 247 ~~~~~~~~-~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~---y~g~~--~~s~~~~~~~~ll~~G 319 (444)
T TIGR03531 247 QSNKYMEL-INKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKS---YPGRA--SASPSLDVLITLLSLG 319 (444)
T ss_pred cChhhhhh-hhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHh---ccCCC--CChHHHHHHHHHHHhC
Confidence 2 11100 0011111 13544 5669998 444 444546 67777776631 11111 2233444433333322
Q ss_pred cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCe--
Q 017633 259 KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV-- 333 (368)
Q Consensus 259 ~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi-- 333 (368)
.+ +++.++..++++++.+.|.++..+.+.........+ -+++.+..- .+.+..++-..|..++|
T Consensus 320 ~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~-----------~~~~~~~~g~~l~~~~v~g 388 (444)
T TIGR03531 320 SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTL-----------KGKDPTMLGSMLYSRRVTG 388 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccc-----------cccCHHHHHHHHHhCCCCC
Confidence 22 456778888888899999888766654222111111 122322210 12234566777766644
Q ss_pred -e-ecCCC-----------CCcc-------cc----ccCCCHHHHHHHHHHHHHHH
Q 017633 334 -Y-FAPSQ-----------FEAG-------FT----SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 334 -~-~~~~~-----------~~~~-------~~----~~~~~~~~i~~~~~~l~~~l 365 (368)
. |.++. ++.. ++ .+.++++|++.++.+|++.+
T Consensus 389 ~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 389 PRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred ceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 1 12221 0000 11 36779999999999999864
No 323
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=1.8e-15 Score=138.79 Aligned_cols=217 Identities=13% Similarity=0.077 Sum_probs=136.8
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 111 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (368)
.+...+|++.++++.+.. ..++++||+.|+..++..+ ..+++.|++....|.+.........
T Consensus 68 ~p~~~~Le~~lA~l~g~~-~av~~sSG~aAi~~al~al--l~~Gd~Vv~~~~~y~~t~~~~~~~l--------------- 129 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV-AALLLASGQAAETFAILNL--AGAGDHIVSSPRLYGGTYNLFHYTL--------------- 129 (436)
T ss_pred CchHHHHHHHHHHHhCCC-eEEEEccHHHHHHHHHHHH--hCCCCEEEEeCCcchHHHHHHHHHh---------------
Confidence 566789999999998643 4677778999999998655 3567888888776655432111100
Q ss_pred CCCCCCcccccC-CCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 112 PKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 112 ~~~~~~~~~~~~-~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
...+.+++.++ ..|+++++++++ +++++|+++.+.|+.|.+.+ +++|+++|++||+++|+|++++. +.
T Consensus 130 -~~~Gi~v~~vdd~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~---~~ 198 (436)
T PRK07812 130 -PKLGIEVSFVEDPDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT---PY 198 (436)
T ss_pred -hcCeEEEEEECCCCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc---cc
Confidence 00122233332 237899998887 57889999999999999999 99999999999999999999852 11
Q ss_pred CccccccCCCcchhhhhhhccC-Cccceeeee-hHHH------------------------------HHHhcCCCCcccc
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGG-RRDI------------------------------MEMVAPAGPMYQA 238 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~-~~~~------------------------------~~~~~~~~~~~~~ 238 (368)
......++.+.-+.|++|.++| |--+|++++ +... +...+. .....
T Consensus 199 ~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 276 (436)
T PRK07812 199 LIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARV--QLLRD 276 (436)
T ss_pred cCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHH--HHHHh
Confidence 1111123333334578899984 433555444 2210 000000 00111
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
.....++..+..++..++.+ +-..++..+++..+.+.|++.
T Consensus 277 ~G~~l~p~~a~l~~rgl~tL--~~R~~~~~~nA~~la~~L~~~ 317 (436)
T PRK07812 277 LGSAISPFNAFLIAQGLETL--SLRIERHVANAQRVAEFLEAR 317 (436)
T ss_pred cCCCCCHHHHHHHhcCcCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 22355666666666665544 345677778888888887764
No 324
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.69 E-value=7e-15 Score=132.51 Aligned_cols=309 Identities=13% Similarity=0.020 Sum_probs=188.8
Q ss_pred CcHHHHHHHHHHHHcC---------CCCCCC--ChhHHHHHHHHHhhCC-C-C-CeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKG---------TSFGAP--CLLENVLAEMVISAVP-S-I-EMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---------~~~~~~--~~~~~~l~~~l~~~~~-~-~-~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
-+++|++++.+.+.+. ..+..+ .+...+.++.++++++ + . +-+++++||+.+++.++.... .++
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~--~~g 91 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL--GGG 91 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC--CCC
Confidence 4678999998876431 112111 2678888999999987 2 2 345666889999999986552 355
Q ss_pred ceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHH-HHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+++++...+.++....-+... |.. .....+...+.. +..++++ .++ ++++++.+.++.+.+
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~-------------~~~~~~~~~l~---~~~~~V~~th~eTst 154 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFT-------------YIPPLDEWQLS---DDAAYVHYTSNETID 154 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCC-------------CCCChhhccCC---CCCCEEEEccCCCcc
Confidence 777777777777655433332 321 111111101111 2333333 554 356788888888888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
|...++ +++| ||+++++|-+++- .+.....+.+ |++.+| |.++ ..++|.+++++++++.+..
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss~--g~~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSDI--LSRPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVREDLLGRALP 218 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCccc--cCccCCHHHc----cEEEEecccccc-CCceEEEEECHHHHhhccc
Confidence 887732 6666 8999999988851 1223344444 354444 9986 4568999999998877654
Q ss_pred C-CCc-------c-ccccCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcCCceE-E---eeccce
Q 017633 232 A-GPM-------Y-QAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAIC-G---GYISGM 297 (368)
Q Consensus 232 ~-~~~-------~-~~~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~---~~~~~~ 297 (368)
. +.+ . ....+++|....+++.++++.+.++ + .+.+.++.+.+.+.+.+.+.+.++... . ......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG-~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v 297 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGG-VAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMN 297 (360)
T ss_pred CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcE
Confidence 2 110 0 1123466777888888999988766 4 345555555555555555554543211 0 111233
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+.+ +...+..++.+.+.++|+.+..+.. ..+|+ ..+++.+|++++++.|++++..
T Consensus 298 ~sf~~-------------~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 298 VPFTL-------------ADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred EEEEc-------------CChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 44443 1223335677888899999965532 34554 5667899999999999998753
No 325
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=1.4e-15 Score=139.70 Aligned_cols=159 Identities=18% Similarity=0.179 Sum_probs=112.4
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+...++++.++++.+... .++++||++|+..++... ..++|+||+.+..|++........
T Consensus 62 ~~p~~~~le~~lA~l~g~~~-av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~~--------------- 123 (433)
T PRK08134 62 SNPTVAVLEERVAALEGGVG-AIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHYT--------------- 123 (433)
T ss_pred cChHHHHHHHHHHHHhCCCc-EEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHHH---------------
Confidence 45678899999999987543 688889999999998655 356788999888777643221110
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
....+.++..++.+|+++++++++ +++++|+++...+++|.+.+ +++|+++|++||+++|+|.+|+ .+.
T Consensus 124 -l~~~Gi~v~~vd~~d~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a---~~~ 192 (433)
T PRK08134 124 -LRRFGIETTFVKPGDIDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFT---TPY 192 (433)
T ss_pred -HhhCCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCc---ccc
Confidence 001223445555558999999998 57889999988877888888 9999999999999999999995 221
Q ss_pred CccccccCCCcchh--hhhhhccC-Cccceeee
Q 017633 191 GGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYG 220 (368)
Q Consensus 191 ~~~~~~~~~~~di~--s~sK~~~~-G~~iG~v~ 220 (368)
. ........|++ |.+|.++| |-.+|.++
T Consensus 193 ~--~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 193 L--LRPFEHGADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred c--CCchhcCCCEEEeccccccCCCCCceEEEE
Confidence 1 11223344654 56699984 44455543
No 326
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.69 E-value=1.9e-14 Score=140.16 Aligned_cols=301 Identities=15% Similarity=0.114 Sum_probs=188.4
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc-----CCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-----~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
+...++.++++++.+-....++.++|++|...++...+.+. .++++++.+.+.|++........|.++......
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d- 608 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCD- 608 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccC-
Confidence 46678999999998733577778888888877776666542 245677778889988776666666655443322
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchh
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 187 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~ 187 (368)
..+.. |+++|+++++++.++++++++...++ .|.+.++ +++|+++|+++|.++++|-++..-
T Consensus 609 ~~G~i-------------Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~a- 670 (939)
T TIGR00461 609 QDGNI-------------DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNA- 670 (939)
T ss_pred CCCCc-------------CHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhh-
Confidence 22222 89999999986445787777755544 4544332 899999999999999999988421
Q ss_pred cccCccccccCCCcchhhhh--hhcc-----CCccceeeeehHHHHHHhcCCCC---------c----cccccCCCCHHH
Q 017633 188 LAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAGP---------M----YQAGTLSGNPLA 247 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~s--K~~~-----~G~~iG~v~~~~~~~~~~~~~~~---------~----~~~~t~~~~~~~ 247 (368)
-......-....|++.+| |+|+ ||..+|.+.+++++...+..... . ..++....+.+.
T Consensus 671 --l~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~ 748 (939)
T TIGR00461 671 --QVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASI 748 (939)
T ss_pred --CCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHH
Confidence 111111122345887665 9887 56789999999887766652210 0 011122334445
Q ss_pred HHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEee-ccc-e--EEEEeecCCCcccchhcccccHH
Q 017633 248 MTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGY-ISG-M--FGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 248 ~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
+..+...+..+..+++ .+....++.+++++|.+. ... ...+ .+. + +.+++.. . +......
T Consensus 749 ~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~~--l~~~~~~~~~hEfv~~~~~--~------~~~~g~~ 815 (939)
T TIGR00461 749 LPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YPI--LFVGTLKHVAHECILDLRP--L------KAKTGIE 815 (939)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---Ccc--cccCCCCceeEEEEEeccc--h------hhhcCCC
Confidence 5555666677766654 344556777888888762 111 1111 111 1 2222221 0 0001234
Q ss_pred HHHHHHHHHHcCeeecCCCCC-----ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLEEGVYFAPSQFE-----AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~-----~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++++|.+.|++....+++ .+++.-..+++|||++++++.++.++
T Consensus 816 ~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 816 AIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred HHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 688999999999987554322 23455667999999999999887644
No 327
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=1.2e-14 Score=143.98 Aligned_cols=302 Identities=15% Similarity=0.150 Sum_probs=175.8
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--cC---CceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--TG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--~~---~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
+...++.++++++++-....+..++|+++...++..++.+ .. +.++++.+.+-|++........|.++.......
T Consensus 542 ~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~ 621 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE 621 (954)
T ss_pred HHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC
Confidence 4567888889998874355555666777776767556543 11 234566667778776666666565554433321
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc-cCCHHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI-APKPDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
. +.. |+++|++.++.+..+++++++... ++.|.. .+ +++|+++|+++|+++++|.++...
T Consensus 622 ~-G~i-------------D~~~L~~~i~~~~~~la~V~it~p-st~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 622 N-GNI-------------DLDDLRAKAEEHADNLAAIMITYP-STHGVFEET----IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred C-CCc-------------CHHHHHHHHhccCCCeEEEEEEcC-CCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh
Confidence 1 211 899999999864345666655433 333443 45 999999999999999999999521
Q ss_pred hcccCccccccCCCcchhhhh--hhcc-----CCccceeeeehHHHHHHhcCCCC---ccc--cccCCCCHH----HHHH
Q 017633 187 RLAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAGP---MYQ--AGTLSGNPL----AMTA 250 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~s~s--K~~~-----~G~~iG~v~~~~~~~~~~~~~~~---~~~--~~t~~~~~~----~~~a 250 (368)
..+ . ...-....|++++| |+|+ ||-.+|++.+++++...+..... ... .++...++. .+..
T Consensus 683 l~~-l--~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~ 759 (954)
T PRK05367 683 QVG-L--ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPI 759 (954)
T ss_pred ccC-C--CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHH
Confidence 011 1 11112345777666 9986 34678888888777766653210 000 011121222 2222
Q ss_pred HHHHHHHHccCCHHHHHH---HHHHHHHHHHHHHHHhcCCceEEeec--cceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 251 GIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYI--SGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
+...+..+..+++.+... .++++++++|.+.. +.....++. ..-..+++...+ ...+....+++
T Consensus 760 a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~---~~~~~~~~~~~~~e~i~~~~~~~--------~~~g~~~~di~ 828 (954)
T PRK05367 760 SWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHY---PVLYTGANGRVAHECILDLRPLK--------ESTGITVDDIA 828 (954)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhc---CccccCCCCCcccceEEEeeccc--------ccCCCCHHHHH
Confidence 334445555565655544 78888888887742 211100000 011122221100 00122357899
Q ss_pred HHHHHcCeeecCCCCC-----ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 326 RGMLEEGVYFAPSQFE-----AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 326 ~~l~~~Gi~~~~~~~~-----~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++|.+.|+.......+ .+.+....+++|+++++++++++..+
T Consensus 829 krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 829 KRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 9999999987653321 23456778999999999999988754
No 328
>PRK04311 selenocysteine synthase; Provisional
Probab=99.68 E-value=3.4e-14 Score=130.88 Aligned_cols=309 Identities=16% Similarity=0.120 Sum_probs=178.2
Q ss_pred CcHHHHHHHHHHHHcCCC--CCC----CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 10 SYLQVLAALGETMKKGTS--FGA----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~--~~~----~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
-++++.+++.+.+..... +.. ..+....+++.++++++. +..++++||+.|+..++... .++++||+.+.
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga-e~a~vv~sgtaAl~l~l~~l---~~GdeVIvs~~ 173 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA-EDALVVNNNAAAVLLALNAL---AAGKEVIVSRG 173 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHHh---CCCCEEEEcch
Confidence 467899999888766321 111 123456888889888864 45778888999999888543 56788888765
Q ss_pred CCC--CCchh---hhhhcCCCccccCCCCCCCCCCCCCCcccccCC---CCHHHHHHHHHcCCCCeEEEEEcccCCC--C
Q 017633 84 CYH--GHADP---FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 153 (368)
Q Consensus 84 ~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~~~~~~~~~~~~~~~~~~~~--~ 153 (368)
.+. +.... .+...|. +++.++. .++++++++++ ++++++++++..+. .
T Consensus 174 e~~~~ggs~~i~~~~~~~G~-------------------~l~~v~~~~~t~~~dle~aI~---~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 174 ELVEIGGAFRIPDVMRQAGA-------------------RLVEVGTTNRTHLRDYEQAIN---ENTALLLKVHTSNYRIE 231 (464)
T ss_pred hhhhcCcchhhHHHHHHCCc-------------------EEEEECCCCCCCHHHHHHhcC---ccCeEEEEEcCCCcccc
Confidence 443 21111 1122222 2222221 26889999997 46777776666543 3
Q ss_pred C--cccCCHHHHHHHHHHHHHhCCEEEEehhhhchh----c---ccCccccccCCCcchhhhh--hhccCCccceeeeeh
Q 017633 154 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGFR----L---AYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 222 (368)
Q Consensus 154 g--~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~----~---g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~ 222 (368)
| ...+ +++|+++|++||+++++|.+..-+. . ......+.....+|+++|| |.++|+ ..|+++++
T Consensus 232 G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~ 306 (464)
T PRK04311 232 GFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGK 306 (464)
T ss_pred ccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEc
Confidence 3 3455 9999999999999999998642110 1 1111112223456888777 999865 48888999
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc--CCH------------HHHHHHHHHHHHHHHHHHHHhcCCc
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGT------------YEYLNKITGELTQGIIDAGKKAGHA 288 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~------------~~~~~~~~~~l~~~l~~~~~~~~~~ 288 (368)
+++++.++... ..-.+..+-...++..+++....+ +.+ .++..++++.+.+.|.+.... +..
T Consensus 307 ~~li~~l~~~~---~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~-~~~ 382 (464)
T PRK04311 307 KELIARLKKHP---LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA-AFA 382 (464)
T ss_pred HHHHHHHhhch---hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC-Cee
Confidence 98888776321 111222233344444444442221 111 366777777777777764211 110
Q ss_pred eEEe------eccc-------eEEEEeecCCCcccchhcccccHHHHHHHHHHHHc--CeeecCCCCCcccc-ccCCCHH
Q 017633 289 ICGG------YISG-------MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE--GVYFAPSQFEAGFT-SLAHSSD 352 (368)
Q Consensus 289 ~~~~------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~~~~~~~~~~~~-~~~~~~~ 352 (368)
..+. +.|. -+.+.+. +......++.+.|++- .|+.+... ..+.+ ..+..++
T Consensus 383 ~~~~~~~~~~gggs~p~~~~~~~~v~~~------------~~~~~~~~l~~~lr~~~~~i~~r~~~-~~~~ld~r~~~~~ 449 (464)
T PRK04311 383 VEVVPSFSQVGGGSLPVDRLPSAAVTLT------------PKDRSLEALAARLRLLPPPVIGRIED-GRLLLDLRTLEEE 449 (464)
T ss_pred EEEEEccCccCCCCCcCCCCCeEEEEEe------------CCCCCHHHHHHHHhcCCCCEEEEEEC-CEEEEEeCcCCHH
Confidence 0111 1111 1122221 1122357888888864 46665332 22333 4456888
Q ss_pred HHHHHHHHHHHHHh
Q 017633 353 DIQHTITAAEKVLR 366 (368)
Q Consensus 353 ~i~~~~~~l~~~l~ 366 (368)
|.+.++++|++++.
T Consensus 450 ~~~~~~~~~~~~~~ 463 (464)
T PRK04311 450 DEERLAAALLEALN 463 (464)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 329
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.66 E-value=5.1e-14 Score=136.42 Aligned_cols=301 Identities=13% Similarity=0.104 Sum_probs=174.1
Q ss_pred hHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc-----CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 34 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 34 ~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-----~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
...++.+.++++++-....+.-++|+.+...+++..+.|. +++++++.+.+-|++........|.++...... .
T Consensus 544 ~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D-~ 622 (954)
T PRK12566 544 MIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECD-P 622 (954)
T ss_pred HHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccC-C
Confidence 4557888888888633346666688888888887776642 234556666677776555555555554433222 1
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhc
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 188 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 188 (368)
++.. |+++|+++++++.++++++++..+++.++...+ +++|+++|+++|+++++|-++. .
T Consensus 623 ~G~i-------------Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~---~ 682 (954)
T PRK12566 623 DGNV-------------DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANL---N 682 (954)
T ss_pred CCCc-------------CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeCh---h
Confidence 2322 899999999865567777666544433332222 9999999999999999998884 1
Q ss_pred ccCccccc-cCCCcchhhhh--hhcc-----CCccceeeeehHHHHHHhcCCC------C-cccc---ccCCCCHHHHHH
Q 017633 189 AYGGAQEY-FGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAG------P-MYQA---GTLSGNPLAMTA 250 (368)
Q Consensus 189 g~~~~~~~-~~~~~di~s~s--K~~~-----~G~~iG~v~~~~~~~~~~~~~~------~-~~~~---~t~~~~~~~~~a 250 (368)
+-. .... -....|++.++ |+|+ ||..+|.+.+.+++...+.... . ...+ +....+.+.+.+
T Consensus 683 a~~-~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~ 761 (954)
T PRK12566 683 AQV-GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPI 761 (954)
T ss_pred hcc-CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHH
Confidence 111 1111 22345776655 9885 3467888777887776665321 0 1111 122222233444
Q ss_pred HHHHHHHHccCCHHHHH----HHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 251 GIHTLKRLKEPGTYEYL----NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 251 ~~~~l~~~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
+..-++.+..+ + .+. ..++.+++++|.+. .+..........+.-+-+.....+. ....+..++++
T Consensus 762 A~~Yi~~lG~e-L-k~aa~~ailnAnYla~rL~~~---~~v~~~~~~~~~~hEfii~~~~l~~------~~g~~~~dvak 830 (954)
T PRK12566 762 SWMYIAMMGPQ-L-ADASEVAILSANYLANQLGGA---FPVLYRGRNERVAHECILDLRPLKA------QTGISEEDVAK 830 (954)
T ss_pred HHHHHHHHCHH-H-HHHHHHHHHHHHHHHHHhHhh---CCCCcCCCCCCeeeEEEEEcccccc------ccCCCHHHHHH
Confidence 44444555444 3 232 34677777777662 2222211001111222222111000 01233578999
Q ss_pred HHHHcCeeecCCCCC-----ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 327 GMLEEGVYFAPSQFE-----AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 327 ~l~~~Gi~~~~~~~~-----~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+|.+.||.......+ .+.+....+++|+++++++|+++.++
T Consensus 831 RL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 831 RLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 999999876543211 13356778999999999999988765
No 330
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=6.4e-15 Score=126.08 Aligned_cols=327 Identities=17% Similarity=0.178 Sum_probs=207.8
Q ss_pred CceeccCC-CcHHHHHHHHHHHHcC-------CCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc
Q 017633 2 PQLIILFP-SYLQVLAALGETMKKG-------TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 2 ~~~~~~g~-~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.+.|.+|. .++++.+.....+.+. .+++.+-+.+.++.+.+++.++-.+.++++. |.+++..++.+. .
T Consensus 100 aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~-gF~ti~S~ipaf---s 175 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSY-GFSTIESAIPAF---S 175 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeecc-ccchhhhcchhh---h
Confidence 35666776 8889999998888883 3456677889999999999998667788776 888888888655 2
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-------C---CeEE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-------G---EIAA 143 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-------~---~~~~ 143 (368)
.+.+|++.+..-+......+.+ +...+..+.++|.+++|+.+.+.+ . ..+.
T Consensus 176 KrGDIi~~de~~nfaIq~Glql-------------------SRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 176 KRGDIIFVDEAVNFAIQKGLQL-------------------SRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred ccCcEEEEehhhhHHHHHHHhh-------------------hhheeEEecCCCHHHHHHhccCcchhhhhccccccceEE
Confidence 3445666554443332232332 223455666779999988876532 1 2568
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch--hcccCccccccCCC---cchhh--hhhhccCCcc
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF--RLAYGGAQEYFGVT---PDLTT--LGKIIGGGLP 215 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~--~~g~~~~~~~~~~~---~di~s--~sK~~~~G~~ 215 (368)
++++..+.|+|.+.+ +.+|..+..||...+|.||.+ .|. ++| .+..+++++. .|+++ ++-++++ .
T Consensus 237 iv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~G-rGvteH~~v~~~~iDiv~~sm~~alas--~ 309 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTG-RGVTEHFGVPITDIDIVTASMETALAS--G 309 (467)
T ss_pred EEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccC-ccccccCCCCccceeeeeecccccccc--c
Confidence 999999999999999 999999999999999999999 444 333 3456777765 35554 4455541 1
Q ss_pred ceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 216 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 216 iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
-|+.+++.-+.++-+-.+..+-.+ -+.++....++..+++.++. ++..+.++.....+...|... .++.......
T Consensus 310 GgFc~G~~~i~~hQrLSg~~Y~fS-AslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~---s~~~v~~~~~ 385 (467)
T KOG1358|consen 310 GGFCAGKSFIADHQRLSGSGYCFS-ASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN---SGFIVSGSPE 385 (467)
T ss_pred CceeecceeeEeeeeccccceeee-ccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcC---CceEEecCcC
Confidence 233344333333322222222222 25567777777778877754 445555666656665555541 2233333344
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC----------CCc--cccccCCCHHHHHHHHHHHH
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEA--GFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------~~~--~~~~~~~~~~~i~~~~~~l~ 362 (368)
.++.-+.+..+...- . .+...-+++++.+..+|+.+.... .+. +++...++++|++++.+.|+
T Consensus 386 SPi~hl~l~~~~~s~-e----~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 386 SPIIHLQLERSYGSR-E----KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred Cceeeeeecccccch-H----HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 555566655422111 0 122334677777777788776541 111 24467889999999999999
Q ss_pred HHHhh
Q 017633 363 KVLRQ 367 (368)
Q Consensus 363 ~~l~~ 367 (368)
+....
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 87654
No 331
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.65 E-value=8.7e-14 Score=127.83 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=173.8
Q ss_pred ccCC--CcHHHHHHHHHHHHcCCC--C----CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 6 ILFP--SYLQVLAALGETMKKGTS--F----GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 6 ~~g~--~~~~v~~a~~~~~~~~~~--~----~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
++|. -++++++++.+.+..... + +........+++.++++++..+ .++++||+.|+..++..+ .++++
T Consensus 87 Nlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~-alvv~sg~aAi~l~l~~l---~~Gde 162 (454)
T TIGR00474 87 NLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED-ALVVNNNAAAVLLALNTL---AKGKE 162 (454)
T ss_pred cCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHh---CCcCE
Confidence 4454 357899999988876321 1 1122446788899999886434 556778999998888543 56788
Q ss_pred EEEEcCCC---CCCchh--hhhhcCCCccccCCCCCCCCCCCCCCcccccCC---CCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 78 IIKFEGCY---HGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 78 vi~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
||+.+..+ .++... .+...|. ++..++. .++++++++++ ++++++++++.
T Consensus 163 VIvs~~e~v~~ggs~~i~~~~~~~G~-------------------~~~~v~~~~~~~l~dle~aI~---~~T~lv~~~h~ 220 (454)
T TIGR00474 163 VIVSRGELVEIGGSFRIPDVMEQSGA-------------------KLVEVGTTNRTHLKDYEDAIT---ENTALLLKVHT 220 (454)
T ss_pred EEECCChhhhhcchhhHHHHHHHcCC-------------------EEEEeCCCCCCCHHHHHHhcC---cCCEEEEEEcc
Confidence 88877653 232111 1111222 2222222 26899999987 46777666665
Q ss_pred CCC--CC--cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hc------ccCccccccCCCcchhhhh--hhccCCccc
Q 017633 150 VGN--SG--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL------AYGGAQEYFGVTPDLTTLG--KIIGGGLPV 216 (368)
Q Consensus 150 ~~~--~g--~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~------g~~~~~~~~~~~~di~s~s--K~~~~G~~i 216 (368)
.+. .| ...+ +++|+++|++||+++++|.+..-+ .. ......+.....+|+++|| |.++|. ..
T Consensus 221 sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~ 295 (454)
T TIGR00474 221 SNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QA 295 (454)
T ss_pred CcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eE
Confidence 443 34 3566 999999999999999999753111 00 1111122233456888888 999765 47
Q ss_pred eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc--CC------------HHHHHHHHHHHHHHHHHHHH
Q 017633 217 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PG------------TYEYLNKITGELTQGIIDAG 282 (368)
Q Consensus 217 G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~------------~~~~~~~~~~~l~~~l~~~~ 282 (368)
|++++++++++.+.... ..-.+..+-...++..+.+....+ +. ..++..++++.+.+.|++.+
T Consensus 296 G~i~g~~~~i~~l~~~~---l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~ 372 (454)
T TIGR00474 296 GIIVGKKELIERLKKNP---LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAAL 372 (454)
T ss_pred EEEEECHHHHHhhhhch---hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhc
Confidence 88889888887765321 111112222333333344433222 11 13467778888888887742
Q ss_pred HhcCCceEEe------ecc-------ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcC--eeecCCCCCcccc-c
Q 017633 283 KKAGHAICGG------YIS-------GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPSQFEAGFT-S 346 (368)
Q Consensus 283 ~~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--i~~~~~~~~~~~~-~ 346 (368)
. .+....+. +.| +-+.+.+. +......++.+.|++.. |+.+... ..+.+ .
T Consensus 373 ~-~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~------------~~~~~~~~l~~~lr~~~~~ii~r~~~-~~~~ld~ 438 (454)
T TIGR00474 373 G-PGFELEIVPGLSQVGGGSLPDERLPSYAVTLT------------PDGLSAEKLEARLRELPPPIIGRIED-DRFLLDL 438 (454)
T ss_pred c-CCceEEEEEcCCcccCCCCcCCCCCeEEEEEe------------cCCCCHHHHHHHHhcCCCCEEEEEEC-CEEEEEe
Confidence 2 11111111 111 11222221 12223578888888654 5554322 22333 3
Q ss_pred cCCCHHHHHHHHHHH
Q 017633 347 LAHSSDDIQHTITAA 361 (368)
Q Consensus 347 ~~~~~~~i~~~~~~l 361 (368)
.+..++|++.++++|
T Consensus 439 r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 439 RTLLEDEEELLIEAL 453 (454)
T ss_pred CcCCHHHHHHHHHHh
Confidence 455778888877765
No 332
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=3.2e-14 Score=130.65 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=135.5
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+....+++.++++.+.. ..++++||++|+..++..+ ..++|+||+.+..|.+..........
T Consensus 67 ~~pt~~~le~~la~l~g~~-~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~l~------------- 130 (437)
T PRK05613 67 TNPTVEALENRIASLEGGV-HAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVTLN------------- 130 (437)
T ss_pred cChHHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHHHH-------------
Confidence 4566789999999988754 5555567999999887654 35678899887777765321111100
Q ss_pred CCCCCCCcccccC-CCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 111 VPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 111 ~~~~~~~~~~~~~-~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
..+.++..++ ..|+++++++++ +++++++++...++.|.+.+ +++|+++|+++|+++|+|.+++ .+
T Consensus 131 ---~~Gi~v~~vd~~~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a---~g 197 (437)
T PRK05613 131 ---RLGIEVTFVENPDDPESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIA---TA 197 (437)
T ss_pred ---hcCeEEEEECCCCCHHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCc---cc
Confidence 0112223332 227899999987 46788888887777778888 9999999999999999999985 22
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccceeeee-hHHHH-HH-------------------------hc-------CCCC
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGG-RRDIM-EM-------------------------VA-------PAGP 234 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~-~~~~~-~~-------------------------~~-------~~~~ 234 (368)
.......+|.+.-+.|+.|.++| |-.+|.+++ +.+.. .. +. ....
T Consensus 198 ~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (437)
T PRK05613 198 ALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAG 277 (437)
T ss_pred cccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHH
Confidence 22112234442223456699985 444555433 32200 00 00 0000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 281 (368)
.........++..+..+...++.+ +-..++..+++..+.+.|++.
T Consensus 278 ~~~~~G~~~~p~~a~l~~rgl~TL--~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 278 LLRDTGATLSPFNAWVTAQGLDTL--SLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred HHHhcCCCCCHHHHHHHHcccCcH--HHHHHHHHHHHHHHHHHHHcC
Confidence 111223356777777766666654 334567777888888887764
No 333
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=9.5e-15 Score=129.79 Aligned_cols=290 Identities=18% Similarity=0.147 Sum_probs=185.3
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++....|.+.++++- +.++.+.++||+.|+..++..+ ..++|.|++....|.+...-+-..
T Consensus 61 ~nPT~~~lE~~~a~LE-g~~~~~afsSGmaAI~~~~l~l--l~~GD~vl~~~~~YG~t~~~~~~~--------------- 122 (396)
T COG0626 61 GNPTRDALEEALAELE-GGEDAFAFSSGMAAISTALLAL--LKAGDHVLLPDDLYGGTYRLFEKI--------------- 122 (396)
T ss_pred CCccHHHHHHHHHHhh-CCCcEEEecCcHHHHHHHHHHh--cCCCCEEEecCCccchHHHHHHHH---------------
Confidence 4567788888888887 4466777789999999987655 346899999888777754322222
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
....+.++..++..+.+++++++.. ++++++++|+..|+.-.+.+ +++|+++|+++|+++|+|++++ +
T Consensus 123 -l~~~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfa-----t 190 (396)
T COG0626 123 -LQKFGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFA-----T 190 (396)
T ss_pred -HHhcCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCcc-----c
Confidence 1112334555554466677777763 48999999999998888888 9999999999999999999996 2
Q ss_pred CccccccCCCcchh--hhhhhccCC--ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 191 GGAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 191 ~~~~~~~~~~~di~--s~sK~~~~G--~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
+...+.+....|++ |.+|.++|. .-.|.+++ ++++.+.+... .........++..+...+..++.+ .-..+
T Consensus 191 P~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~--~~~~~G~~l~p~dA~l~lRGlkTL--~~Rm~ 266 (396)
T COG0626 191 PVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA--QRANTGAVLSPFDAWLLLRGLRTL--ALRME 266 (396)
T ss_pred ccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH--HHhhcCCCCCHHHHHHHHhccchH--HHHHH
Confidence 23344455556665 778999974 56676664 45666655210 011122245677777777777765 33456
Q ss_pred HHHHHHHHHHHHHHHHHH--h--cC-Cc---------eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 266 YLNKITGELTQGIIDAGK--K--AG-HA---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~--~--~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+..+++..+.+.|++... + +| ++ ....+.|.++.|.+.. +....+|.+.|.--
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~-------------~~~~~~f~~~L~l~ 333 (396)
T COG0626 267 RHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN-------------EEAAKKFLDSLKLF 333 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC-------------hHHHHHHHHhCCcc
Confidence 777777777777776210 0 00 00 0111467788888742 13345565555422
Q ss_pred CeeecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 332 GVYFAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 332 Gi~~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..+-|+... ..+++.+.-|+++.+++-|+++++.
T Consensus 334 ~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~ 394 (396)
T COG0626 334 KLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAK 394 (396)
T ss_pred EEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 22333232110 0123455668888899999988865
No 334
>PLN02263 serine decarboxylase
Probab=99.62 E-value=8.8e-13 Score=120.15 Aligned_cols=289 Identities=13% Similarity=0.031 Sum_probs=177.9
Q ss_pred ChhHHHHHHHHHhhCC-CC--CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC
Q 017633 32 CLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 108 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
.+.+.++.++++++++ +. ..-.+|+|||+++..++.++|.+.+ +.++..+...|.+...+....|.++...+....
T Consensus 132 ~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~-~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 132 RQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFP-DGILYASRESHYSVFKAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcC-CcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence 4678888999999887 32 3578899999999999999987533 457777888888888888777776554433222
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC-----EEEEehhh
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA-----LLIFDEVM 183 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~-----~li~De~~ 183 (368)
..+ |+++|++.+.++..++.+++..-...+.|.+-| +++|.++|++||+ +|++|.+|
T Consensus 211 g~m--------------D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~ 272 (470)
T PLN02263 211 GEI--------------DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGAL 272 (470)
T ss_pred CcC--------------cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccc
Confidence 222 899999999865334555555554455677666 9999999999997 99999999
Q ss_pred hch-h-cccCccccccCC--Ccchhhh--hhhccCCccceeeeehHHHHHHhcCCCCccc--cccCCCC--HHHHHHHHH
Q 017633 184 TGF-R-LAYGGAQEYFGV--TPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSGN--PLAMTAGIH 253 (368)
Q Consensus 184 ~~~-~-~g~~~~~~~~~~--~~di~s~--sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~--~~t~~~~--~~~~~a~~~ 253 (368)
.|+ . .... ...+.. ..|-+++ -|.++..+++|.++.+++..+.+.....+.. ..+..++ ......++.
T Consensus 273 GG~~lPf~~~--~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 273 FGLMMPFVKR--APKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhhHhhhccc--ccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 876 2 1010 011111 1233333 3998888999999887665544432111111 1122222 223455566
Q ss_pred HHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHH
Q 017633 254 TLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 330 (368)
Q Consensus 254 ~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (368)
.++.+..+++ .++..++++++.+++++. +......+....+.+.. +. .....
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~V~f~~-------------p~--------~~~~~ 405 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSSTVVFER-------------PK--------DEEFV 405 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceEEEEec-------------Cc--------hHHhh
Confidence 7776655544 444555566666666553 44333333334434321 11 11134
Q ss_pred cCeeecCCCCC-ccccccCCCHHHHHHHHHHHHHHHh
Q 017633 331 EGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 331 ~Gi~~~~~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+|..+...+.. ++.+....+.+.++++++.|++...
T Consensus 406 ~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 406 RRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 66666654433 2233444688999999999987653
No 335
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.59 E-value=8.7e-14 Score=125.68 Aligned_cols=306 Identities=13% Similarity=-0.008 Sum_probs=171.4
Q ss_pred CcHHHHHHHHHHHHcC--CCCC--CCChhHHHHHHHHHhhCC-C-CCeEEEe-CChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKG--TSFG--APCLLENVLAEMVISAVP-S-IEMVRFV-NSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~--~~~~--~~~~~~~~l~~~l~~~~~-~-~~~v~~~-~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
-+|+|++++.+..... ..+. ...+...+.++.++++++ . .++|+|+ +|||.+++.++.... . ++..++..
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--~-~~~l~i~~ 90 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--E-KKSLHLSF 90 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--c-ccccEEec
Confidence 4567777776431111 1121 224677888999999987 3 3467775 779999999996542 1 22333333
Q ss_pred CCCCCCchhhhhhc---CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 83 GCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 83 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+.++....-.... ...+.. +..+++ +.++..+. ++++++.+.++.+.+|.+.|
T Consensus 91 -G~~~~~~~~~a~~~~~~~~~~~-----------------~~~~~~--~~~~~~~~---~~~~lV~~~h~et~tG~~~p- 146 (361)
T TIGR01366 91 -GEFSSKFAKAVKLAPWLGEPII-----------------VTADPG--SAPEPQAD---PGVDVIAWAHNETSTGVAVP- 146 (361)
T ss_pred -CHHHHHHHHHHHhhhccCCceE-----------------EecCCC--CCCCCccC---CCCCEEEEcccCCccceecc-
Confidence 4444333222221 111111 111111 11111122 47889999898888999998
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcc-cCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcCC---C
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPA---G 233 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g-~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~~---~ 233 (368)
+++| ++++|+++++|.+++ .| ....++. .|++.+| |++++.-.++.+++++++++.+... +
T Consensus 147 ---i~~I---~~~~g~~~iVDavqs---~g~~~idv~~----~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~ 213 (361)
T TIGR01366 147 ---VRRP---EGSDDALVVIDATSG---AGGLPVDIAE----TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASG 213 (361)
T ss_pred ---cccc---cccCCCeEEEEcCcc---ccCCCCCHHH----CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCC
Confidence 7776 588999999999985 22 2223332 4766555 9998422355667788877665521 1
Q ss_pred C---ccc-----------cccC-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEee---c
Q 017633 234 P---MYQ-----------AGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGY---I 294 (368)
Q Consensus 234 ~---~~~-----------~~t~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~---~ 294 (368)
. .+. ..|. +++.....+..++++.+.+.+-.+...++.+.+.+.+.+.+...+.. ..... .
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 293 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR 293 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence 0 010 1223 33444455777888888654212334344444444444433333311 01101 0
Q ss_pred cce-EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC----CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 295 SGM-FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 295 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
... ..+.+ +++.+..++.+.|.++||.+.++. ...+|+ ...++++|+++++++|++++++
T Consensus 294 s~~v~~v~~-------------~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 294 SQVVGTIDF-------------VDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ccceEEEEC-------------CCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 111 11221 123345789999999999998763 223444 5678999999999999999876
Q ss_pred C
Q 017633 368 I 368 (368)
Q Consensus 368 ~ 368 (368)
+
T Consensus 361 ~ 361 (361)
T TIGR01366 361 L 361 (361)
T ss_pred C
Confidence 4
No 336
>PRK15029 arginine decarboxylase; Provisional
Probab=99.59 E-value=9.2e-14 Score=133.48 Aligned_cols=234 Identities=10% Similarity=0.017 Sum_probs=148.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
.+.....+..+..++.|+.....+++||.|.++..++..+. +++|.|+ ++.+.|.+...++.+.|...++.. |...
T Consensus 202 ~p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--~~gd~Vl-v~RN~HKSv~~al~L~ga~Pvyl~-P~~~ 277 (755)
T PRK15029 202 DHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--TDNDVVV-VDRNCHKSIEQGLILTGAKPVYMV-PSRN 277 (755)
T ss_pred CCCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--CCCCEEE-eecccHHHHHHHHHHcCCeEEEec-cccc
Confidence 35566777788888888765677777766677776665552 4555554 588999999999999887543321 1111
Q ss_pred CCCCCCCCcccccC--CCCHHHHHHHHHcCCCCe--------EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 110 GVPKGATYETLTAP--FNDVSALENLFENNKGEI--------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 110 ~~~~~~~~~~~~~~--~~d~~~le~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
..-. .-.++ +-+++.++++++++++.. ++++++|.+ .|.... +++|+++|++++++|++
T Consensus 278 ~~Gi-----~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llv 346 (755)
T PRK15029 278 RYGI-----IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHF 346 (755)
T ss_pred ccCC-----ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEE
Confidence 1000 00111 114899999998876544 577777766 688888 99999999999999999
Q ss_pred ehhhhc-hhcccCccc-ccc-----C-CCcc-hhhhh--hhccCCc-cceeeeehHH--HH--HHhcCCCCccccccCCC
Q 017633 180 DEVMTG-FRLAYGGAQ-EYF-----G-VTPD-LTTLG--KIIGGGL-PVGAYGGRRD--IM--EMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 180 De~~~~-~~~g~~~~~-~~~-----~-~~~d-i~s~s--K~~~~G~-~iG~v~~~~~--~~--~~~~~~~~~~~~~t~~~ 243 (368)
||||.. |.....+.. ... . ..+| +++.| |.++ ++ ..+++..+.. .+ +.++. .+....|.++
T Consensus 347 DEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~-alTQaS~LHv~~~~~~id~~r~~~--~l~~~qSTSP 423 (755)
T PRK15029 347 DEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN-ALSQASYIHVREGRGAINFSRFNQ--AYMMHATTSP 423 (755)
T ss_pred ECccccccccCccccccccccccccccCCCceEEEEchhhccc-chhhhhhheeCCCccccCHHHHHH--HHHHHcCCCc
Confidence 999943 322222221 112 2 4567 66655 7775 34 3334444322 11 22221 1224456688
Q ss_pred CHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 281 (368)
+.+-+++...+.++++. +.+.++..+....+|+.+.++
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888888887763 235677888888888888765
No 337
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.59 E-value=8.7e-13 Score=118.38 Aligned_cols=307 Identities=15% Similarity=0.042 Sum_probs=186.3
Q ss_pred CcHHHHHHHHHHHHcCC--CCC------CCC---hhHHHHHHHHHhhCC--CCCeEEEe-CChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGT--SFG------APC---LLENVLAEMVISAVP--SIEMVRFV-NSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~--~~~------~~~---~~~~~l~~~l~~~~~--~~~~v~~~-~~gt~a~~~al~~~~~~~~~ 75 (368)
.|..|++++.+++.+.. +.+ ..+ +...++++.+.++++ ..+.++++ .|||.|++.++.... .++
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--AEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC--CCC
Confidence 46689999999888521 111 112 567788888888887 23456666 559999999996552 356
Q ss_pred ceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCC---CHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFN---DVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+++++...+.++....-+... |. +.....+. ..++. |+++++ ++ ++++.+.+..+.+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~-------------~~~~~~~~~~~~~~--~~---~~~~~v~~th~ET 141 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGK-------------EGNYTKIPDPSTWE--IS---EDAAYVHYCANET 141 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccc-------------cCCCCCCCCHHhcC--CC---CCCCEEEEcCCCC
Confidence 778888777777655433332 22 21111110 01111 444444 12 3677888878777
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhh--hhhhccCCccceeeeehHHHHHHh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s--~sK~~~~G~~iG~v~~~~~~~~~~ 229 (368)
.+|...+ ++++.+++++++|-+++- .+....++.++ ++. ..|+++ ..++|.+++++++++.+
T Consensus 142 stGv~~~---------~l~~~~~~l~iVDavss~--g~~~id~~~~d----~~~~ssqK~lg-P~Glg~l~~s~~~~~~~ 205 (349)
T TIGR01364 142 IHGVEFR---------ELPDVKNAPLVADMSSNI--LSRPIDVSKFG----LIYAGAQKNIG-PAGLTVVIVRKDLLGRA 205 (349)
T ss_pred cccEecc---------eecccCCCeEEEEccccc--cCccCCHHHcc----EEEEecccccC-CCceEEEEECHHHHhhc
Confidence 7887554 566678999999988851 12233444443 444 449996 44689999999988776
Q ss_pred cCCCC-cc-------cccc-CCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcC-CceE-E--eecc
Q 017633 230 APAGP-MY-------QAGT-LSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAG-HAIC-G--GYIS 295 (368)
Q Consensus 230 ~~~~~-~~-------~~~t-~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~-~--~~~~ 295 (368)
..... .. ...+ +++|....++..++++.+.++ + .+.+.++.+.+.+.+.+.+...+ +... . ....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG-~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs 284 (349)
T TIGR01364 206 SRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGG-VKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRS 284 (349)
T ss_pred ccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcC
Confidence 53211 00 0122 366777888888999988765 4 35555555555555555555553 2111 1 0111
Q ss_pred -ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 -GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+.+.+. ......++.+.+.++|+.+.++.. ..+|+ ..+++++|+++++++|++++.+
T Consensus 285 ~~v~sf~~~-------------~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 285 RMNVVFTLG-------------NEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CeEEEEecC-------------ChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 33444431 112235677888999996665532 34554 5667899999999999998754
No 338
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.58 E-value=4.5e-14 Score=113.92 Aligned_cols=165 Identities=27% Similarity=0.230 Sum_probs=109.6
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCC
Q 017633 35 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 113 (368)
Q Consensus 35 ~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (368)
..++++.+++.++ +.+++.+++||++|+..+++.+. ..++.|++..+.|++.........+.++............
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~- 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGG- 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC--CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccc-
Confidence 3577888888884 56788899999999999998773 3467899988888887532233333333221111111000
Q ss_pred CCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCc
Q 017633 114 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 192 (368)
Q Consensus 114 ~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~ 192 (368)
.+.+++++... .++++++++.+.++++|...+ +++|.++|+++|+++|+|++|.++ .....
T Consensus 79 -----------~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~- 140 (170)
T cd01494 79 -----------LDVAILEELKA--KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG- 140 (170)
T ss_pred -----------hhhhhhhhccc--cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc-
Confidence 02224443332 357899999988888888887 799999999999999999999765 32111
Q ss_pred cccccCCCcchhh--hhhhccCCccceeeeeh
Q 017633 193 AQEYFGVTPDLTT--LGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 193 ~~~~~~~~~di~s--~sK~~~~G~~iG~v~~~ 222 (368)
.......+|+++ ++|.+++ .++|+++++
T Consensus 141 -~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 -VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred -cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 112233467665 4599986 789988753
No 339
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.57 E-value=7.8e-14 Score=125.95 Aligned_cols=211 Identities=17% Similarity=0.156 Sum_probs=132.0
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+...+|.+.++++.+. +.++.++||+.|+..++... ..++|.||+....|.+........
T Consensus 62 ~~P~~~~lE~~la~leg~-~~av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~--------------- 123 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENA-EHALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKV--------------- 123 (384)
T ss_pred CChhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHH---------------
Confidence 456678899999998864 45677889999999999755 357889998766665543221111
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
....+.++..++.++.+.++ +. ++++++++++.+.++++.+.+ +++|+++|++++ +++|.++..
T Consensus 124 -~~~~Gi~v~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s----- 187 (384)
T PRK06434 124 -LKTLGIHVDYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS----- 187 (384)
T ss_pred -HHhcCcEEEEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-----
Confidence 00112223333332333333 22 346899999998888777777 999999999998 467999731
Q ss_pred CccccccCCCcchh--hhhhhccC-C-ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 191 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 191 ~~~~~~~~~~~di~--s~sK~~~~-G-~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.......+...|++ |.+|.++| | .-.|.++. ++++.+.++. .........+++.++.++..++.+ +.+.+
T Consensus 188 ~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~---~~~~~G~~~~~~~A~l~~~gL~tL--~~R~~ 262 (384)
T PRK06434 188 PYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE---RRKTLGSNPDPIQAYLALRGLKTL--GLRME 262 (384)
T ss_pred cccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhCCCcH--HHHHH
Confidence 11222334455665 45599985 3 33566655 4556555442 111122345677777766666544 44566
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIID 280 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~ 280 (368)
+..++++.+.+.|..
T Consensus 263 r~~~~a~~~a~~L~~ 277 (384)
T PRK06434 263 KHNKNGMELARFLRD 277 (384)
T ss_pred HHHHHHHHHHHHHHc
Confidence 777777777777765
No 340
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.57 E-value=2.3e-12 Score=116.44 Aligned_cols=304 Identities=14% Similarity=0.011 Sum_probs=164.8
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCch-hhhhhcCCCccccC-----
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD-PFLVKAGSGVATLG----- 104 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~----- 104 (368)
.++...+|.+.++++++ .+.++.++||+.|+++++.+. .++++.| ++.+|..+. +.+...|..+....
T Consensus 76 gd~s~~~LE~~vAe~lG-~e~aV~v~sGTaAl~ll~~l~--v~pGd~V---p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~ 149 (460)
T PRK13237 76 GSRNFYHLEETVQEYYG-FKHVVPTHQGRGAENLLSRIA--IKPGQYV---PGNMYFTTTRYHQELNGGIFVDIIIDEAH 149 (460)
T ss_pred CCCcHHHHHHHHHHHHC-CCeEEEeCCHHHHHHHHHHhC--CCCcCEE---CCccchHhhHHHHHhCCcEEEeeeccccc
Confidence 45567789999999885 457999999999999864433 3455543 444444333 32444444221110
Q ss_pred ----CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 017633 105 ----LPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 105 ----~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li 178 (368)
.....+.. |+++++++++.. +++++.+. +.+++..+|...+..+ ++++.++|++||+.||
T Consensus 150 ~~~~~~p~tgnl-------------D~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~-m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 150 DAQSDHPFKGNV-------------DLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMAN-MRAVRELCDKHGIKVF 215 (460)
T ss_pred ccccCCCCCCCc-------------CHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHh-HHHHHHHHHHcCCEEE
Confidence 00111111 899999999853 23343333 3444433455444334 9999999999999999
Q ss_pred Eehhhh-c---h-hcccC-ccccc-------cCCCcchhh--hhhhccCCccceeeee-hHHHHHHhcCCCCcccc-ccC
Q 017633 179 FDEVMT-G---F-RLAYG-GAQEY-------FGVTPDLTT--LGKIIGGGLPVGAYGG-RRDIMEMVAPAGPMYQA-GTL 241 (368)
Q Consensus 179 ~De~~~-~---~-~~g~~-~~~~~-------~~~~~di~s--~sK~~~~G~~iG~v~~-~~~~~~~~~~~~~~~~~-~t~ 241 (368)
.|.++. + | ...+. +.-.. ..-..|.++ ++|.++++. .|+++. ++++++.++.....+-+ .|+
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~~ty 294 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEGMPSY 294 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCCCcCC
Confidence 999983 2 2 11111 00000 111235554 447776432 356655 67788877753322222 233
Q ss_pred CCC-HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC--CCcccchhccccc
Q 017633 242 SGN-PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSET 318 (368)
Q Consensus 242 ~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 318 (368)
++- .--+.+...++....++++.++.....+++.++|.+ .|.+...+..|+-+.++...- .+.. ..
T Consensus 295 gg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~----~Gvpv~~p~ggH~v~vda~~~lph~~~-------~~ 363 (460)
T PRK13237 295 GGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLA----AGVPIVEPVGGHAVFLDARRFLPHLPQ-------DQ 363 (460)
T ss_pred CChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHH----CCCceecCCCceEEEEEhHHhCCCCCc-------cc
Confidence 322 112333333444333345666666667777766666 566655566666556654431 1111 11
Q ss_pred HHHHHHHHHHH-HcCeeecCC------CCC-----------ccc---cccCCCHHHHHHHHHHHHHHHh
Q 017633 319 TKFARFYRGML-EEGVYFAPS------QFE-----------AGF---TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 319 ~~~~~~~~~l~-~~Gi~~~~~------~~~-----------~~~---~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
--+..++..|- +.||....- .++ .+| +.-.-|.++++...++|..+.+
T Consensus 364 ~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 364 FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH
Confidence 11456666664 446544321 111 012 2334478999999999988764
No 341
>PLN02880 tyrosine decarboxylase
Probab=99.57 E-value=8.1e-13 Score=123.33 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=177.0
Q ss_pred CChhHHHHHHHHHhhCCCC--------CeEEEeCChHHHHHHHHHHHHHhc-------C-CceEEEEcCCCCCCchhhhh
Q 017633 31 PCLLENVLAEMVISAVPSI--------EMVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 94 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~--------~~v~~~~~gt~a~~~al~~~~~~~-------~-~~~vi~~~~~~~~~~~~~~~ 94 (368)
.++.+.++.+++++.++-+ ...++++|||+|+..++.++|... + ...++......|.+...++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 3477888999999988622 247889999999999998887531 1 23355556666888787777
Q ss_pred hcCCCc---cccCCCCC-C-CCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 017633 95 KAGSGV---ATLGLPDS-P-GVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAI 166 (368)
Q Consensus 95 ~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i 166 (368)
..|-+. ...+.... . .+ |+++|++.+.+. ...+.+++..-...++|.+-| +++|
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~m--------------d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI 261 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYAL--------------APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLEL 261 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcC--------------CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHH
Confidence 776642 22222211 1 12 899999999742 123556666555556787777 9999
Q ss_pred HHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCccceeeeehH--HHHHHhcCCCCccc---
Q 017633 167 RRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR--DIMEMVAPAGPMYQ--- 237 (368)
Q Consensus 167 ~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~--~~~~~~~~~~~~~~--- 237 (368)
+++|++||+++++|.+|.++ .....+-....++ .+|-++ .-|.+...+.+|.+++++ .+.+.+.....+..
T Consensus 262 ~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~ 341 (490)
T PLN02880 262 GKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKA 341 (490)
T ss_pred HHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCcc
Confidence 99999999999999999765 2211111111232 345444 459998888999987753 23333322111100
Q ss_pred --------cccCC---CCHHHHHHHHHHHHHHccCCHHHHHH---HHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 238 --------AGTLS---GNPLAMTAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 238 --------~~t~~---~~~~~~~a~~~~l~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
...++ +...........++.+..+++.+++. +.++++.+.+++. .++....+....++.|.+.
T Consensus 342 ~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~---~~~el~~~~~~~iv~Fr~~ 418 (490)
T PLN02880 342 SQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD---SRFEVVTPRIFSLVCFRLV 418 (490)
T ss_pred ccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEecCCceEEEEEEEe
Confidence 00011 01112333444556555555555555 5666665555442 1222222233345555543
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcC-eeecCC---CCCcccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-i~~~~~---~~~~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+..... . .......++.+.|.+.| +++... +...+|+ +..++++|++.+++.|.++..+
T Consensus 419 ~~~~~~-~----~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 419 PPKNNE-D----NGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCCCh-h----hHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 211000 0 00111245666666665 444432 2233343 4566889999999999887654
No 342
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.56 E-value=1.7e-12 Score=116.92 Aligned_cols=311 Identities=13% Similarity=0.061 Sum_probs=165.2
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++...+|.+.++++++ .+.+++++||+.|++++..+ ..+++|.| .+..|+..+.+.....|..+.........+
T Consensus 69 g~~s~~~lE~~va~~~G-~~~av~v~sGT~Al~ll~~l--~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYG-FKYVVPTHQGRGAENLLSQI--AIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHC-CCeEEEcCCHHHHHHHHHHh--CCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 45667899999999885 45799999999998875432 23456654 333333444443454444222110010000
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc---
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTG--- 185 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~--- 185 (368)
.. ... + .... -|+++++++++.. ..+++.+.++..++. +|..++ .+.++++.++|++||+.||.|.++..
T Consensus 144 ~~-~~~-p-~~Gn-iD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs-~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 144 AQ-LNI-P-FKGN-VDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVS-MANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred cc-cCC-C-CCCC-cCHHHHHHHhccccCcccCceEEEEecccCCCeeCC-HHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 00 000 0 0000 1899999999852 223444444444444 455444 44499999999999999999988842
Q ss_pred -h-hcccCccccccCCC-----------cchhhhhhhcc-CCccceeeee--hHHHHHHhcCCCCcccc-ccCCC-CHHH
Q 017633 186 -F-RLAYGGAQEYFGVT-----------PDLTTLGKIIG-GGLPVGAYGG--RRDIMEMVAPAGPMYQA-GTLSG-NPLA 247 (368)
Q Consensus 186 -~-~~g~~~~~~~~~~~-----------~di~s~sK~~~-~G~~iG~v~~--~~~~~~~~~~~~~~~~~-~t~~~-~~~~ 247 (368)
| ...+.. +.+.. .|.+++| +.- ++.++|.+++ ++++++..+.....+-+ .++++ ..-.
T Consensus 219 ~~I~~re~g---~~~~~i~ei~~e~~~~aD~~~~S-~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~ 294 (450)
T TIGR02618 219 YFIKEREQG---YEDKSIAEILKEMMSYADGCTMS-GKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRD 294 (450)
T ss_pred hhhhccccc---ccCCCHHHHHHHHhccCcEEEEe-eccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhh
Confidence 1 110100 11211 2343333 332 3346666544 67888777643222111 12222 2223
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC--CCcccchhcccccHHHHHHH
Q 017633 248 MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 248 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 325 (368)
+.+...+++...+..+.++.....++|.+.|.+. +++...+..++.+.++...- .+.. ..--+..++
T Consensus 295 ~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~----Gvpv~~p~ggh~V~vda~~~lph~~~-------~~~p~~al~ 363 (450)
T TIGR02618 295 MEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA----GVPIVEPVGGHAVFLDARRFLPHIPQ-------DQFPAQSLA 363 (450)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC----CCcccCCCCcceEEEEhHHhCCCCCh-------hhChHHHHH
Confidence 3333344543333455666666677777777774 55544456677777776541 1111 111145666
Q ss_pred HHHH-HcCeeecCC------CCC-----------ccc---cccCCCHHHHHHHHHHHHHHHh
Q 017633 326 RGML-EEGVYFAPS------QFE-----------AGF---TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 326 ~~l~-~~Gi~~~~~------~~~-----------~~~---~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..|- +.||.-..- .++ .+| +.-.-|.++++...+++..+.+
T Consensus 364 ~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 364 ASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred HHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 6664 445544331 111 012 2334478999999999988764
No 343
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.56 E-value=6.5e-15 Score=131.93 Aligned_cols=231 Identities=15% Similarity=0.130 Sum_probs=145.9
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccC-CCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDS 108 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 108 (368)
.+.....+..+..++.|+.....++++|.|.++..++..+ ..++|.|++ +.+.|.+...++.+.|...++.. ....
T Consensus 63 ~p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~--~~~gd~VLv-~RN~HkSv~~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMAL--CRPGDKVLV-DRNCHKSVYNALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TTBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHH--TTTTCEEEE-ETT--HHHHHHHHHHTEEEEEEEEEE-T
T ss_pred CCccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHh--cCCCCEEEE-cCCcHHHHHHHHHHcCCeEEEecCCccc
Confidence 3566778888888888875556667776667777777665 245655554 77899999988888877543221 1111
Q ss_pred CCCCCCCCCcccccCC--CCHHHHHHHHHcCCCCeE---EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 109 PGVPKGATYETLTAPF--NDVSALENLFENNKGEIA---AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~--~d~~~le~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.++. -.++. -+.+.++++++++++..+ ++++.|.+ .|...+ +++|+++|++++.+|++||||
T Consensus 140 ~gi~-------~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 140 YGII-------GGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp TS-B-------EEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-TT
T ss_pred cCCc-------cCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEccc
Confidence 1111 11111 035899999999877666 78888877 688888 999999999999999999999
Q ss_pred hc-hhcccCccccccCCCcc-------hhhhh--hhccCCc-cceeeeehHHH---HHHhcCCCCccccccCCCCHHHHH
Q 017633 184 TG-FRLAYGGAQEYFGVTPD-------LTTLG--KIIGGGL-PVGAYGGRRDI---MEMVAPAGPMYQAGTLSGNPLAMT 249 (368)
Q Consensus 184 ~~-~~~g~~~~~~~~~~~~d-------i~s~s--K~~~~G~-~iG~v~~~~~~---~~~~~~~~~~~~~~t~~~~~~~~~ 249 (368)
.. +... .+.........| +++.| |.++ ++ ..+++..+... .+.+.. .+....|.+++.+-++
T Consensus 207 Gah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~-altQts~lh~~~~~~v~~~~~~~--~l~~~~TTSPSY~lmA 282 (417)
T PF01276_consen 207 GAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLP-ALTQTSMLHVKGDRIVDHERVNE--ALSMHQTTSPSYPLMA 282 (417)
T ss_dssp -TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSS-S-TT-EEEEEETCCCTTHHHHHH--HHHHHS-SS--HHHHH
T ss_pred cccccCC-CCccchhhccCccccccceeeeechhhccc-ccccceEEEecCCCcccHHHHHH--HHHHHcCCChHHHHHH
Confidence 43 3222 222334455566 66555 7775 44 45566554331 233331 2234566688999999
Q ss_pred HHHHHHHHH-cc--CCHHHHHHHHHHHHHHHHHH
Q 017633 250 AGIHTLKRL-KE--PGTYEYLNKITGELTQGIID 280 (368)
Q Consensus 250 a~~~~l~~~-~~--~~~~~~~~~~~~~l~~~l~~ 280 (368)
....+.+++ .. ..+.++..++.+.+|+++++
T Consensus 283 SlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 283 SLDVARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 988888888 33 34778888999999999966
No 344
>PLN02590 probable tyrosine decarboxylase
Probab=99.55 E-value=9.9e-12 Score=116.25 Aligned_cols=310 Identities=11% Similarity=0.007 Sum_probs=173.7
Q ss_pred ChhHHHHHHHHHhhCCCC--------CeEEEeCChHHHHHHHHHHHHHhc-------C-CceEEEEcCCCCCCchhhhhh
Q 017633 32 CLLENVLAEMVISAVPSI--------EMVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLVK 95 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~--------~~v~~~~~gt~a~~~al~~~~~~~-------~-~~~vi~~~~~~~~~~~~~~~~ 95 (368)
.+.+.++.++++++++-+ ..-++++|||+|+..++.++|... + .+-++......|-+...++.+
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~i 248 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLI 248 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHH
Confidence 467888889999988722 347789999999999998887531 1 223555566667777777776
Q ss_pred cCCC---ccccCCCCC--CCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 017633 96 AGSG---VATLGLPDS--PGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 96 ~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
.|.+ +...+.... ..+ |+++|++.|.+. ...+.+|+..-...++|.+-| +++|+
T Consensus 249 lGlg~~~vr~Vp~d~~~~~~m--------------d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia 310 (539)
T PLN02590 249 GGIHEENIRLLKTDSSTNYGM--------------PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLG 310 (539)
T ss_pred cCCCcccEEEEeCCCCCCCcC--------------CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHH
Confidence 6553 222222211 112 899999999752 123445555554455677666 99999
Q ss_pred HHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCccceeeeehH--HHHHHhcCCCCcc-----
Q 017633 168 RITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR--DIMEMVAPAGPMY----- 236 (368)
Q Consensus 168 ~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~--~~~~~~~~~~~~~----- 236 (368)
++|++||+||+||.+|.|+ ........-..++ ..|-++ .-|.+...+.+|.+++++ .+.+.+.....+.
T Consensus 311 ~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~ 390 (539)
T PLN02590 311 NIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVS 390 (539)
T ss_pred HHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCccc
Confidence 9999999999999999775 2111100001122 123333 349998888999887754 2333332111100
Q ss_pred ------ccc--cCCC-CHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 237 ------QAG--TLSG-NPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 237 ------~~~--t~~~-~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
... +... -.......+.+++.+..+++ +++..+.++++.+.+++. ..+....+..-.++.|.+.+
T Consensus 391 ~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~---~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 391 KKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD---PSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred ccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCceEEEEEEecC
Confidence 000 1111 12345555566666655554 344445555555544432 12322222223344444432
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCee-ecCC---CCCcccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-~~~~---~~~~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...... .......++.+.|.+.|.. +.+. +...+|+ +..++++|++.+++.|.+...+
T Consensus 468 ~~~~~~-----~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGDED-----QCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCCHH-----HHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 110000 0012235677777777744 4432 2233333 5667999999999999987654
No 345
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.54 E-value=1.8e-12 Score=117.20 Aligned_cols=310 Identities=15% Similarity=0.033 Sum_probs=172.7
Q ss_pred CcHHHHHHHHHHHHcC--CC---CCCC------ChhHHHHHHHHHhhCC--CCCeEEEeCC-hHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKG--TS---FGAP------CLLENVLAEMVISAVP--SIEMVRFVNS-GTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~--~~---~~~~------~~~~~~l~~~l~~~~~--~~~~v~~~~~-gt~a~~~al~~~~~~~~~ 75 (368)
.+++|++++.+.+.+. .+ +... .+...+.++.++++++ ..+.++|++| ||++++.++..... +.+
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~-~~~ 88 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG-DKG 88 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-CCC
Confidence 5678999999887431 11 1111 2567888999999987 4567888877 99999999965522 112
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCC-HHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
....+..+.|...........|..+.....+.... +.+ .+..+..++ ++++.+.+..+.+.+|
T Consensus 89 ~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG 152 (355)
T cd00611 89 TADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGK-------------YTKIPDVETWDLA---PDAAYVHYCSNETIHG 152 (355)
T ss_pred eEEEEECCHHHHHHHHHHHhcCCCcEEEecccccC-------------CCCCCCHhhcCCC---CCCCEEEEeCCccccc
Confidence 12222233332211111122232222111110000 102 122222233 4677777777777777
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
...+ ++++.||+++++|-+++- .+....++.+++ ++.+--|.+| ..++|++++++++.+.+....+
T Consensus 153 ~~~~---------~i~~~~g~~~~VDa~qs~--g~~~idv~~~~~--~~ss~~K~lG-P~G~g~l~~~~~~~~~~~~~~~ 218 (355)
T cd00611 153 VEFD---------EVPDTGGVPLVADMSSNI--LSRPIDVSKFGV--IYAGAQKNLG-PAGVTVVIVRKDLLGKARKITP 218 (355)
T ss_pred EEcc---------eecccCCCeEEEEccccc--cCCCCCHHHhCE--EEeecccccC-CCceEEEEECHHHHhhcccCCC
Confidence 6532 345569999999999951 122344444442 4434569885 4578999999988876553211
Q ss_pred -cc-------ccc-cCCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhc-CCceEE---eecc-ceEE
Q 017633 235 -MY-------QAG-TLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKA-GHAICG---GYIS-GMFG 299 (368)
Q Consensus 235 -~~-------~~~-t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~---~~~~-~~~~ 299 (368)
.. ... ..++|....++..++++.+.+. ++ +.+.++.+.+.+.+.+.+.+. ++.... .... ..+.
T Consensus 219 ~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~-e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvs 297 (355)
T cd00611 219 SMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGV-EAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVP 297 (355)
T ss_pred CcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEE
Confidence 00 011 2355667888888999988765 43 455555555555555544444 221010 1112 3345
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC--CCcccc--ccCCCHHHHHHHHHHHHHH
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~~~~--~~~~~~~~i~~~~~~l~~~ 364 (368)
|.+.. .....++.+.+.++|+....+. ...+|+ ..+++++|++++++.|+++
T Consensus 298 f~~~~-------------~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 298 FRLGK-------------EELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EEcCC-------------hhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 54321 1122555578888999855543 234555 4566999999999999985
No 346
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=7.6e-13 Score=113.94 Aligned_cols=299 Identities=16% Similarity=0.139 Sum_probs=169.8
Q ss_pred CCCCCCChhHHHHHHHHHhhCCC---------CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhc
Q 017633 26 TSFGAPCLLENVLAEMVISAVPS---------IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA 96 (368)
Q Consensus 26 ~~~~~~~~~~~~l~~~l~~~~~~---------~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 96 (368)
+..+.+.+...++.+...++.-+ --..+-|.|||-|+..+......+.++..|.+.++++..+. ......
T Consensus 62 ~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~-~If~~a 140 (396)
T COG1448 62 TKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK-AIFEAA 140 (396)
T ss_pred ccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHH-HHHHhc
Confidence 34566778888888888887532 12456788999999999976666667777888888776554 444444
Q ss_pred CCCc-cccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 017633 97 GSGV-ATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 175 (368)
Q Consensus 97 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~ 175 (368)
|-++ .++++....... |.+.+-..+++.+++..+++-.+-+|++| +-++.+++++|.++.++.+.
T Consensus 141 Gl~v~~Y~Yyd~~~~~~-------------df~~mla~L~~a~~~~vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~l 206 (396)
T COG1448 141 GLEVETYPYYDAETKGL-------------DFDGMLADLKTAPEGSVVLLHGCCHNPTG-IDPTEEQWQELADLIKERGL 206 (396)
T ss_pred CCceeeeeccccccccc-------------cHHHHHHHHHhCCCCCEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCC
Confidence 4444 233232222211 78888777876544444444444444444 56677779999999999999
Q ss_pred EEEEehhhhchhcccCcccccc------CCCcch---hhhhhhcc-CCccceee-ee--hHHHHHHhcC-CCCccccccC
Q 017633 176 LLIFDEVMTGFRLAYGGAQEYF------GVTPDL---TTLGKIIG-GGLPVGAY-GG--RRDIMEMVAP-AGPMYQAGTL 241 (368)
Q Consensus 176 ~li~De~~~~~~~g~~~~~~~~------~~~~di---~s~sK~~~-~G~~iG~v-~~--~~~~~~~~~~-~~~~~~~~t~ 241 (368)
+-++|=+|.||..| ..-+.+ ...+.+ .||||.|+ =|-|+|.. ++ +++....+.. ...... .+|
T Consensus 207 ip~~D~AYQGF~~G--leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR-~~y 283 (396)
T COG1448 207 IPFFDIAYQGFADG--LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIR-TNY 283 (396)
T ss_pred eeeeehhhhhhccc--hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHH-hcc
Confidence 99999999998322 111222 222322 47999999 48899986 33 3333333221 111111 333
Q ss_pred CC-CHHHHHHHHHHHH--HHc-----c-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 242 SG-NPLAMTAGIHTLK--RLK-----E-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 242 ~~-~~~~~~a~~~~l~--~~~-----~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
+. +..++......|+ .+. + +++++++.+.++.+.+.|++......+. .+....+|+.+.
T Consensus 284 SnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~----------- 351 (396)
T COG1448 284 SNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFD-FIISQRGMFSYT----------- 351 (396)
T ss_pred CCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc-hHhhcCceeecC-----------
Confidence 32 2333333222221 010 0 2234445555555555555432222122 222223333321
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCCCCccccc-cCCCHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQFEAGFTS-LAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~~~~~-~~~~~~~i~~~~~~l~~~ 364 (368)
+- ..+=..+|+ +.||++...| |++ ..+++..++.++++|.++
T Consensus 352 -----Gl-s~~QV~rLree~~IY~v~sG----Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 352 -----GL-SPEQVDRLREEFGIYLVASG----RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred -----CC-CHHHHHHHHHhccEEEecCC----eeeeccCChhhHHHHHHHHHhh
Confidence 00 123345555 5699998876 432 456889999999998875
No 347
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=8.2e-14 Score=122.30 Aligned_cols=215 Identities=13% Similarity=0.093 Sum_probs=148.7
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
.++....+...++++.+. ..+++.+||+.|...++.... +.++.++.....|.|.....-... .
T Consensus 75 ~nPt~~~le~~iaal~ga-~~~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~-~------------ 138 (409)
T KOG0053|consen 75 GNPTRDVLESGIAALEGA-AHALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFL-P------------ 138 (409)
T ss_pred CCCchHHHHHHHHHHhCC-ceEEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHH-H------------
Confidence 356677888888887754 457778899999999997663 678899999988888643322221 1
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
..+.....++.+|++++++.++ ++++++++|++.|+...+.+ +++++++|+++|+++|+|++..+
T Consensus 139 ---~~gie~~~vd~~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~----- 203 (409)
T KOG0053|consen 139 ---KFGGEGDFVDVDDLKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGS----- 203 (409)
T ss_pred ---HhCceeeeechhhHHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCc-----
Confidence 1222344444445666666666 57999999999998888888 99999999999999999999863
Q ss_pred CccccccCCCcchh--hhhhhccCC--ccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 191 GGAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 191 ~~~~~~~~~~~di~--s~sK~~~~G--~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
....+.+.+..|++ |.+|.++|. .-.|.++.+ +++.+.+.. ....-.+..++..+......++.+ .=..+
T Consensus 204 p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~---~~~~lg~~~~p~~~~ll~Rglktl--~lRi~ 278 (409)
T KOG0053|consen 204 PYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF---LQEDLGWCEDPFDLFLLSRGLKTL--HLRIN 278 (409)
T ss_pred ccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH---HHHHhcCCCCHHHHHHHhcCcchh--hhhHH
Confidence 23455566667876 577999974 566677775 777777662 223344567888888777666644 22344
Q ss_pred HHHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDA 281 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~ 281 (368)
+..+++..+.+.|++.
T Consensus 279 ~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 279 KHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHhhhC
Confidence 4555555556666553
No 348
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.52 E-value=9.1e-12 Score=108.65 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc-----CCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~-----~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
+...+|.++|.++.+-..-.+--++|+++=...+...+.|. +.+++++.+.+.||...+.....|-.++......
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 35567788888877533445556778888888887777662 3567777788999998888888887765544433
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh----
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM---- 183 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~---- 183 (368)
.-.+ |+++|+++.. ++++++++. ++|+-|. .+++ +.+|+++.+++|..|+.|-+=
T Consensus 189 ~G~V--------------DlddLk~k~~---~~~AalMiT-nPsT~Gv--FE~~-I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 189 NGNV--------------DLDDLRAKAE---DNLAALMIT-NPSTLGV--FEED-IREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred CCCc--------------cHHHHHHHhc---cceeEEEec-cCccccc--chhh-HHHHHHHHHHcCCEEEecCcchhhh
Confidence 3333 8999999888 467766663 2233342 3333 999999999999999999443
Q ss_pred hch-hcccC-ccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC------CC----------ccccccCCCC
Q 017633 184 TGF-RLAYG-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA------GP----------MYQAGTLSGN 244 (368)
Q Consensus 184 ~~~-~~g~~-~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~------~~----------~~~~~t~~~~ 244 (368)
.|. +.|.. +...++++. =||+-.-| ||-..|-|.+..+++..+-.. .. ......+.+|
T Consensus 248 vG~~rPGd~G~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs 324 (496)
T COG1003 248 VGLARPGDMGFDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGS 324 (496)
T ss_pred hccccccccccceEEeecc---cccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCc
Confidence 333 33332 111222211 03444444 458999999999888776531 11 0112334455
Q ss_pred HHHHHHHHHHHHHHccCCHH---HHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCcccchhcccccHH
Q 017633 245 PLAMTAGIHTLKRLKEPGTY---EYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
......++.-+..+..+++. +...-++.|+..+|+.. ++.+.... ...+-+.++.+. .+...+..
T Consensus 325 ~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~---y~~~y~~~~~~~HE~ild~r~--------l~~~~Gv~ 393 (496)
T COG1003 325 ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY---YPVPYTGENRVAHECILDARP--------LKKETGVR 393 (496)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc---CccccCCCCcceeEEEeechH--------hHhhcCCc
Confidence 55556666666666655543 34556777777777763 22211100 011222222221 01113455
Q ss_pred HHHHHHHHHHcCeeecCCCCCcc-------ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAG-------FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~-------~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++++|++.|++--...+|.+ -+.-.-+.+++|++++++.++.++
T Consensus 394 ~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 394 ALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred HHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999888877743 123455889999999999988754
No 349
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.50 E-value=1.3e-11 Score=122.41 Aligned_cols=310 Identities=13% Similarity=0.081 Sum_probs=175.4
Q ss_pred hhHHHHHHHHHhhCC-CC-C-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhc---CCCccccCCC
Q 017633 33 LLENVLAEMVISAVP-SI-E-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA---GSGVATLGLP 106 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~~-~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 106 (368)
+..++.++.+++.++ +. + .|+||+|+|+|+..+.... .+.+++.|++. ...|.+........ |..+.....+
T Consensus 78 ~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l-~~~~gd~Iv~t-~~eH~svl~~~~~a~~~G~~v~~v~~~ 155 (805)
T PLN02724 78 DTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETF-PWSSESHFCYT-LENHNSVLGIREYALEKGAAAIAVDIE 155 (805)
T ss_pred HHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHC-CCCCCCeEEEe-eccccchHHHHHHHHHcCCeEEeccch
Confidence 467788899999987 44 3 5899999999999887543 23456777774 45555555444322 2222221111
Q ss_pred CCCCCCCCCCCcccccCCCCHHHHHHHHH----c---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh------
Q 017633 107 DSPGVPKGATYETLTAPFNDVSALENLFE----N---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN------ 173 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~le~~~~----~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~------ 173 (368)
...+.... ....+.. +.+++++.++ . ..++++++.+...++.+|.+.| ++++..+++..
T Consensus 156 ~~~~~~~~---~~g~~~~-~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~ 227 (805)
T PLN02724 156 EAANQPTN---SQGSVVV-KSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSK 227 (805)
T ss_pred hccccccc---ccccccc-chhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhccccccc
Confidence 00000000 0000000 1245555532 1 1245678888888888999999 77665544432
Q ss_pred --CCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcCC----CCc--------c-
Q 017633 174 --GALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPA----GPM--------Y- 236 (368)
Q Consensus 174 --~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~~----~~~--------~- 236 (368)
++++++|.+|+ .|.. ..+--...+|++++| |.+++..++|++++++++.+.+... +.. +
T Consensus 228 ~g~~~v~vDaaQ~---~g~~-piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~ 303 (805)
T PLN02724 228 SGRWMVLLDAAKG---CGTS-PPDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFV 303 (805)
T ss_pred CcceEEEeehhhh---cCCC-CCChhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEeccccee
Confidence 35799999995 2221 222233456887776 9887556799999888776655421 110 0
Q ss_pred --------ccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcC--CceEE---------eec
Q 017633 237 --------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG--HAICG---------GYI 294 (368)
Q Consensus 237 --------~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~---------~~~ 294 (368)
..-.-+.|..+.+++.++++.+.+ +...++..+..+++.+.|.++....+ ..... ...
T Consensus 304 ~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r 383 (805)
T PLN02724 304 KRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQ 383 (805)
T ss_pred eccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccc
Confidence 000114567777777788888765 33455666666666666665421111 11111 124
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC---------------------------------
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--------------------------------- 341 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--------------------------------- 341 (368)
++++.|.+..... ......++...+.++||.++.|..+
T Consensus 384 ~~ivsFnv~~~~~---------~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~ 454 (805)
T PLN02724 384 GPIVTFNLKRADG---------SWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVI 454 (805)
T ss_pred cCEEEEEEEcCCC---------CEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhhee
Confidence 5677777654221 1111233444445568888765221
Q ss_pred ------ccc--cccCCCHHHHHHHHHHHHHHH
Q 017633 342 ------AGF--TSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 342 ------~~~--~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+| +.++.|.+|++++++.|++..
T Consensus 455 ~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 455 HGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred cCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 123 346779999999999999864
No 350
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.50 E-value=1e-11 Score=116.35 Aligned_cols=308 Identities=16% Similarity=0.091 Sum_probs=166.5
Q ss_pred ChhHHHHHHHHHhhCCC--------------CCeEEEeCChHHHHHHHHHHHHHhc--C---------------------
Q 017633 32 CLLENVLAEMVISAVPS--------------IEMVRFVNSGTEACMGVLRLARAFT--G--------------------- 74 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~--------------~~~v~~~~~gt~a~~~al~~~~~~~--~--------------------- 74 (368)
++.+..+.+++++.+.+ .....+++|||+|+..|+.++|... .
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 46778888888887631 1346789999999999998887531 0
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCC---ccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcc
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEP 148 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~ 148 (368)
.+.+|+....-|.+...+....|.+ +...+......+ |+++|++.+++ ...++.+++...
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~--------------d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRI--------------DVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcC--------------CHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 1235666667777666555554442 222112111111 89999999874 112233444444
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchhhhh--hhccCCccceeeeeh-H
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTTLG--KIIGGGLPVGAYGGR-R 223 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~iG~v~~~-~ 223 (368)
..+.+|.+.| +++|+++|++||+++++|.+|.+. .....+....-++ ..|.++++ |.+.+...+|.++.+ +
T Consensus 274 Gtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~ 349 (522)
T TIGR03799 274 GTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP 349 (522)
T ss_pred cCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH
Confidence 4456788888 999999999999999999999754 1111000001233 45777666 988877889998775 4
Q ss_pred HHHHHhcCCCCccc--------cccCCCCH-HHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 017633 224 DIMEMVAPAGPMYQ--------AGTLSGNP-LAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICG 291 (368)
Q Consensus 224 ~~~~~~~~~~~~~~--------~~t~~~~~-~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 291 (368)
++.+.+.....+.. ..++.++. ........+++.+..++ +.++..++++++.+.|++. .++....
T Consensus 350 ~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~---~~~el~~ 426 (522)
T TIGR03799 350 ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ---PDFELVT 426 (522)
T ss_pred HHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC---CCeEEec
Confidence 55555443211100 01111221 11224567777776544 3444445555555554432 1232222
Q ss_pred eeccceEEEEeecCCCcccchhcc-------c--ccHHHHHHHHHHHHcCeeecC-C--------CCC--cccc---ccC
Q 017633 292 GYISGMFGFFFTEGPVYNFEDAKK-------S--ETTKFARFYRGMLEEGVYFAP-S--------QFE--AGFT---SLA 348 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~l~~~Gi~~~~-~--------~~~--~~~~---~~~ 348 (368)
...-.++.|.+.+........... . .......+.+.+.+.|..+.. . +.+ .+|+ +..
T Consensus 427 ~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~ 506 (522)
T TIGR03799 427 EPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL 506 (522)
T ss_pred CCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence 233345555543321110000000 0 011124666777777744432 1 111 1232 556
Q ss_pred CCHHHHHHHHHH
Q 017633 349 HSSDDIQHTITA 360 (368)
Q Consensus 349 ~~~~~i~~~~~~ 360 (368)
+++++++.+++.
T Consensus 507 tt~~~i~~~l~~ 518 (522)
T TIGR03799 507 TTHEILQDILDE 518 (522)
T ss_pred CCHHHHHHHHHH
Confidence 788999887764
No 351
>PLN02271 serine hydroxymethyltransferase
Probab=99.49 E-value=7.8e-11 Score=108.43 Aligned_cols=269 Identities=17% Similarity=0.075 Sum_probs=155.1
Q ss_pred eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhh--------cCCCccccCCC--CCCCCCCCCCCccc
Q 017633 51 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK--------AGSGVATLGLP--DSPGVPKGATYETL 120 (368)
Q Consensus 51 ~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~ 120 (368)
.|.. .||+.|+..++..+ ..++|.|+..+..+.|+....... .+..+...+|. ...+..
T Consensus 217 NVQp-~SGs~AN~aV~~AL--l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~I-------- 285 (586)
T PLN02271 217 NVQP-YSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYI-------- 285 (586)
T ss_pred ceee-ccHHHHHHHHHHHh--cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCcc--------
Confidence 3444 48999999999666 467899999988887775543211 11111111111 111111
Q ss_pred ccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccC
Q 017633 121 TAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFG 198 (368)
Q Consensus 121 ~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~ 198 (368)
|.+++++.... .+++++++...... ...+ +++++++|+++|++|++|-+| .|+ ..+.. . ....
T Consensus 286 -----Dyd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~-~-sP~~ 350 (586)
T PLN02271 286 -----DYDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAKEC-V-NPFD 350 (586)
T ss_pred -----CHHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccCcC-C-CCCc
Confidence 89999986554 47888888664433 3455 999999999999999999999 555 22211 0 0111
Q ss_pred CCcchhhhh--hhccCCccceeeeehHH--------------------HHHHhcCCC-CccccccCCCCHHHHHHHHHHH
Q 017633 199 VTPDLTTLG--KIIGGGLPVGAYGGRRD--------------------IMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTL 255 (368)
Q Consensus 199 ~~~di~s~s--K~~~~G~~iG~v~~~~~--------------------~~~~~~~~~-~~~~~~t~~~~~~~~~a~~~~l 255 (368)
..|+++++ |++.|. |.|.++.+++ +.+.+...- +..+++ +....+++...++
T Consensus 351 -~aDvvt~TTHKtLrGP-rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG---phn~~IAalAval 425 (586)
T PLN02271 351 -YCDIVTSTTHKSLRGP-RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG---PHNNHIAALAIAL 425 (586)
T ss_pred -CCcEEEeCCcccCCCC-CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccC---hhHHHHHHHHHHH
Confidence 25776554 998653 4477776653 333333211 122222 1223355555666
Q ss_pred HHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 256 KRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 256 ~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+.....+ +.+.+.++++.+.+.|.+ .++..... ...+++++++... ..++....+.|-+.
T Consensus 426 kea~~~efk~Ya~QVv~NAkaLA~~L~~----~G~~vv~ggTdnHlvLvDl~~~------------g~~G~~ae~~Le~~ 489 (586)
T PLN02271 426 KQVATPEYKAYMQQVKKNAQALASALLR----RKCRLVTGGTDNHLLLWDLTTL------------GLTGKNYEKVCEMC 489 (586)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHH----CCCeEeeCCCCcceeeecCccc------------CCCHHHHHHHHHHc
Confidence 6655444 455566666666666655 34432222 2234667776432 12245666777777
Q ss_pred CeeecCCC---C------Ccccc------ccCCCHHHHHHHHHHHHHHHh
Q 017633 332 GVYFAPSQ---F------EAGFT------SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 332 Gi~~~~~~---~------~~~~~------~~~~~~~~i~~~~~~l~~~l~ 366 (368)
||.+.... + ..+|+ +..+.++|++++.+.|.+++.
T Consensus 490 ~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 490 HITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 88884421 1 11232 356678888888888877764
No 352
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=9.2e-11 Score=101.64 Aligned_cols=310 Identities=16% Similarity=0.138 Sum_probs=184.6
Q ss_pred CcHHHHHHHHHHHHc-C------CCCCCCC----hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKK-G------TSFGAPC----LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-~------~~~~~~~----~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+|.|+++....+.+ . ..||..+ +.+.-..++..++|+ +..+|. ..||++|+..++... ..++|.
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQ-PhSGs~AN~av~~Al--l~pGDt 114 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQ-PHSGSQANQAVYLAL--LQPGDT 114 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccC-CCCchHHHHHHHHHH--cCCCCe
Confidence 467788887766655 1 1233333 334444445555666 444444 457999999998766 357899
Q ss_pred EEEEcCCCCCCchhh--hhhcCCCccccCCCC--CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 78 IIKFEGCYHGHADPF--LVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 78 vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
|+..+-+..|+.... ....|.-....+|+. ..... |.|++++.+.++ +++++++=. +..
T Consensus 115 imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~I-------------DyD~~~k~a~e~--kPK~ii~G~--SaY 177 (413)
T COG0112 115 IMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLI-------------DYDEVEKLAKEV--KPKLIIAGG--SAY 177 (413)
T ss_pred EecccCCCCCcccCCCCCCccceeEEeEecccccccCcc-------------CHHHHHHHHHHh--CCCEEEECc--ccc
Confidence 999887777765433 222222222222211 11111 899999999976 677777633 333
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchhhhh--hhccCCccceeeeeh-HHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR-RDIMEM 228 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~-~~~~~~ 228 (368)
-...+ +++++++|++.|..|++|-+| +|+ -.|.+- +.... .|++|-| |+|. |.|-|.++++ +++.+.
T Consensus 178 ~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p--~P~~~-AdvVTtTTHKTlr-GPrGG~Il~~~eel~kk 249 (413)
T COG0112 178 SRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGVHP--NPLPH-ADVVTTTTHKTLR-GPRGGIILTNDEELAKK 249 (413)
T ss_pred ccccC----HHHHHHHHHHhCceEEehHHHHHHHHhcccCC--CCCCc-cceEeCCcccCCC-CCCceEEEeccHHHHHH
Confidence 44566 999999999999999999999 777 433321 12222 4666544 8885 5588888887 488888
Q ss_pred hcCC-CCccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEee
Q 017633 229 VAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFT 303 (368)
Q Consensus 229 ~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 303 (368)
+... -+..+++ +....+++-..++....+. ++.+++.++++.+.+.|.+. ++..... ...+++.++++
T Consensus 250 in~aVFPg~qgg---pl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~----G~~vvsGgTdnHl~lVDl~ 322 (413)
T COG0112 250 INSAVFPGLQGG---PLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER----GFKVVSGGTDNHLVLVDLR 322 (413)
T ss_pred hhhhcCCccCCC---hHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc----CCeEecCCccceEEEEEcc
Confidence 8741 1222222 2233343333444433343 35667778888888887773 3221111 22336667765
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc----------ccc------ccCCCHHHHHHHHHHHHHHHh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA----------GFT------SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~----------~~~------~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.. ....++....|-+.||.+--..-|. +|+ ...+.++|++++-+.|.+++.
T Consensus 323 ~~------------~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 323 SK------------GLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred cC------------CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 21 2224556666667788886542211 222 356688899888888888775
No 353
>PLN02452 phosphoserine transaminase
Probab=99.45 E-value=3.8e-11 Score=107.83 Aligned_cols=309 Identities=11% Similarity=-0.011 Sum_probs=182.7
Q ss_pred CcHHHHHHHHHHHHcCC---------CCCC--CChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGT---------SFGA--PCLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~---------~~~~--~~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
-+++|++++.+.+.+.. .+.. ..+...+.++.|.++++ + .+-+++..|||.+++.++..+. .++
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~--~~~ 95 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLC--KPG 95 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcC--CCC
Confidence 34678888877654311 1111 13567788888888886 2 3456777899999999986552 355
Q ss_pred ceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+++++...+.++....-.... |....... ..... ....+ +++++ +.+ ++...+.+.++...+|
T Consensus 96 ~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~-~~~~~--------~~~~~--~~~~~----~~~-~~~~~v~~~hnETstG 159 (365)
T PLN02452 96 DKADFVVTGSWSKKAAKEAKKYCKTNVIAS-GKDEK--------YTKIP--SVSEW----ELT-PDAKFVHICANETIHG 159 (365)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCCcEEEe-cCCCC--------CCCCC--ChHHc----CCC-CCCcEEEECCCCCCCc
Confidence 677777777777544333322 22111100 00000 01111 44443 222 3567777777777778
Q ss_pred cc-cCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC
Q 017633 155 FI-APKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 155 ~~-~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
.. .+ ++++. ++++|+|-+++- .+....++.+++ |+.+..|.+| ..++|.+++++++++......
T Consensus 160 v~~~~----~~~i~------~~~lvVDa~Ss~--g~~pidv~~~~v--~~~saqK~lG-P~Gl~~v~vr~~~l~~~~~~~ 224 (365)
T PLN02452 160 VEFKD----YPDVG------NVPLVADMSSNF--LSKPVDVSKYGV--IYAGAQKNVG-PSGVTIVIIRKDLIGNARPIT 224 (365)
T ss_pred EecCc----ccccC------CCeEEEECCccc--cCcccCHHHcCE--EEEecccccC-CCCeEEEEEcHHHHhhcccCC
Confidence 74 44 55554 289999988851 223445556665 6667779996 335889999999887765322
Q ss_pred Cccc--------ccc-CCCCHHHHHHHHHHHHHHccC-C---HHHHHHHHHHHHHHHHHHHHHhcCCceE-E--e-eccc
Q 017633 234 PMYQ--------AGT-LSGNPLAMTAGIHTLKRLKEP-G---TYEYLNKITGELTQGIIDAGKKAGHAIC-G--G-YISG 296 (368)
Q Consensus 234 ~~~~--------~~t-~~~~~~~~~a~~~~l~~~~~~-~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~--~-~~~~ 296 (368)
+.+. .++ ++++....++..++++.+.++ + +.++.+++.+++++.|.+. .++... . . ....
T Consensus 225 ~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~---~G~y~~~~~~~~rs~~ 301 (365)
T PLN02452 225 PGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES---NGFYVCPVEKSVRSLM 301 (365)
T ss_pred CchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCChHHhCCe
Confidence 2111 122 366777888888999988764 3 3444555555555555442 122101 1 0 1222
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC--cccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--AGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.|.+. ......+|.+.+.++|+...+|... .+|. .-.++.++++.+++.+++.-++
T Consensus 302 ~vsF~~~-------------~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 302 NVPFTLG-------------GSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEEEcC-------------CchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 3444432 2235688999999999999887422 2444 3456999999999999987543
No 354
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.44 E-value=9.6e-12 Score=118.61 Aligned_cols=314 Identities=11% Similarity=0.013 Sum_probs=177.0
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh-hhhcCCCcccc-CCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF-LVKAGSGVATL-GLPDS 108 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 108 (368)
++....+..+..++.|+.....+++||.|.++..++..+. .++|. |+++.+.|.+.... +.+.|...++. +.-..
T Consensus 172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--~~Gd~-VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--TPGDL-VLFDRNNHKSNHHGALIQAGATPVYLETARNP 248 (720)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--CCCCE-EEeecccHHHHHHHHHHHcCCeEEEeeccccc
Confidence 4556777777788888755667777766777777776552 35554 45688999998864 77776643321 11101
Q ss_pred CCCCCCCCCcccccCCC--CHHHHHHHHHcCC-C-------CeEEEEEcccCCCCCcccCCHHHHHHHHHH-HHHhCCEE
Q 017633 109 PGVPKGATYETLTAPFN--DVSALENLFENNK-G-------EIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALL 177 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~--d~~~le~~~~~~~-~-------~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l-~~~~~~~l 177 (368)
.+++ -.++.. +.+.+++++++++ + ...+++.+|.+ .|.... +++|+++ |++++ .|
T Consensus 249 ~Gi~-------g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~l 314 (720)
T PRK13578 249 FGFI-------GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-YI 314 (720)
T ss_pred cCCc-------CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-cE
Confidence 1111 011111 3567999998762 2 23466666665 688888 9999998 68888 99
Q ss_pred EEehhhhch-hcccC---ccccccCCCcc----hhhhh--hhccCCc-cceeeeehHHHH---------HHhcCCCCccc
Q 017633 178 IFDEVMTGF-RLAYG---GAQEYFGVTPD----LTTLG--KIIGGGL-PVGAYGGRRDIM---------EMVAPAGPMYQ 237 (368)
Q Consensus 178 i~De~~~~~-~~g~~---~~~~~~~~~~d----i~s~s--K~~~~G~-~iG~v~~~~~~~---------~~~~~~~~~~~ 237 (368)
++||||.+. ..... +........+| +++.| |.++ ++ ..+++..+...+ +.++. .+..
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~-alTQaS~LHvk~~~i~g~~~~v~~~r~~~--al~m 391 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA-GFSQTSQIHKKDNHIKGQARYCPHKRLNN--AFML 391 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch-hhhhHhhhhcCCcccccccccCCHHHHHH--HHHH
Confidence 999999443 22221 11122345566 66666 7765 34 444555533211 12221 1223
Q ss_pred cccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcC-C-ceEE---------------------
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG-H-AICG--------------------- 291 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~-~-~~~~--------------------- 291 (368)
..|.|++.+-+++...+..++.. ..+.++..+++..+|+.+.+...... + +..+
T Consensus 392 ~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~ 471 (720)
T PRK13578 392 HASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFS 471 (720)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccc
Confidence 45557788888887776666653 34667788888888888733321111 0 0000
Q ss_pred -eeccceEE--------EEeecCC--Ccccchh-ccc----ccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHH
Q 017633 292 -GYISGMFG--------FFFTEGP--VYNFEDA-KKS----ETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDD 353 (368)
Q Consensus 292 -~~~~~~~~--------~~~~~~~--~~~~~~~-~~~----~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~ 353 (368)
.+...+.+ +.+...+ +...... ... .+.-+..++++|.++||.+.-.+...+. ++...++++
T Consensus 472 ~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~ 551 (720)
T PRK13578 472 FEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAK 551 (720)
T ss_pred cccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHH
Confidence 00000000 0001100 0000000 000 0011478899998999999877655443 477789999
Q ss_pred HHHHHHHHHHH
Q 017633 354 IQHTITAAEKV 364 (368)
Q Consensus 354 i~~~~~~l~~~ 364 (368)
+++++++|.++
T Consensus 552 ~~~Lv~aL~~f 562 (720)
T PRK13578 552 LQQLVAMLARF 562 (720)
T ss_pred HHHHHHHHHHH
Confidence 99999999866
No 355
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.43 E-value=5.4e-11 Score=102.97 Aligned_cols=296 Identities=13% Similarity=0.094 Sum_probs=163.5
Q ss_pred CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHH-HHHHHHHHh--c---------CCceEEEEcCCCCCCchhhh
Q 017633 27 SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACM-GVLRLARAF--T---------GRERIIKFEGCYHGHADPFL 93 (368)
Q Consensus 27 ~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~-~al~~~~~~--~---------~~~~vi~~~~~~~~~~~~~~ 93 (368)
+|+..-+...++++..+++++ +.+++++..+.|-.+. -.+..+..+ . ++-+.+++.++|-.+ ++..
T Consensus 63 NY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH-Fai~ 141 (425)
T PF12897_consen 63 NYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH-FAIT 141 (425)
T ss_dssp SS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH-HHHH
T ss_pred CCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH-HHHH
Confidence 342345677899999999998 7888888755543322 222222111 1 245688888888654 3444
Q ss_pred hhcCCCccccCCCCCCCCCCCCCCcccccCCC----CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 94 VKAGSGVATLGLPDSPGVPKGATYETLTAPFN----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
..-|. +-+.+|++ |++.+|++.++. +.+|.++|.|-++|++.+..+.|..++++++
T Consensus 142 E~~Gi-------------------emi~VpM~~dGPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m 201 (425)
T PF12897_consen 142 EHFGI-------------------EMIPVPMTEDGPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAM 201 (425)
T ss_dssp HHCT--------------------EEEEEEEETTEE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS
T ss_pred HhhCc-------------------EEEecCCCCCCCCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcC
Confidence 43333 22333332 899999998764 6899999999999987788888889999999
Q ss_pred -HHHhCCEEEEehhhhch-hccc-C-cc-cc------ccCCCcc----hhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 170 -TKENGALLIFDEVMTGF-RLAY-G-GA-QE------YFGVTPD----LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 170 -~~~~~~~li~De~~~~~-~~g~-~-~~-~~------~~~~~~d----i~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+...++.++-|++|.=. ..+. . .. .+ ..| .|| +.|.||---+|.+++++.+++.-++.+..
T Consensus 202 ~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~--- 277 (425)
T PF12897_consen 202 KTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKK--- 277 (425)
T ss_dssp --SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHH---
T ss_pred CcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHH---
Confidence 45689999999999421 1111 0 00 00 111 233 45889988888899999998877666652
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHcc-C-CHHHHHHHHHHHHHHHHHHH-------HH-hcCC-ceEEeeccceEEEEee
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKE-P-GTYEYLNKITGELTQGIIDA-------GK-KAGH-AICGGYISGMFGFFFT 303 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~-~-~~~~~~~~~~~~l~~~l~~~-------~~-~~~~-~~~~~~~~~~~~~~~~ 303 (368)
.....+.+.+-+.|..-. +++.+ + ++..+.++.++.++-++... +. ..+. .+..+..|.|++++..
T Consensus 278 ~~~~~tIgpdKvNQLRHv---rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~ 354 (425)
T PF12897_consen 278 HLSVQTIGPDKVNQLRHV---RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVL 354 (425)
T ss_dssp HHHHH-S---HHHHHHHH---HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEES
T ss_pred HhcCceeCccHHHHHHHH---HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecC
Confidence 233455566666655533 33334 4 67777777777777665433 22 2232 4556666778888763
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--------ccc-ccCCCHHHHHHHHHHHHHH
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--------GFT-SLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--------~~~-~~~~~~~~i~~~~~~l~~~ 364 (368)
+..+.++.+.+.+.||.+.+.|. |+ +|+ +...+.+|++.+++.+.-.
T Consensus 355 --------------~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~c 412 (425)
T PF12897_consen 355 --------------DGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATC 412 (425)
T ss_dssp --------------TT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHH
T ss_pred --------------CChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 23468899999999999998542 21 354 5677899999998887544
No 356
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.43 E-value=9.6e-11 Score=96.04 Aligned_cols=323 Identities=15% Similarity=0.119 Sum_probs=189.1
Q ss_pred CCcHHHHHHHHHHHHcCCC---------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 9 PSYLQVLAALGETMKKGTS---------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.-+++.++++.+.-+..+. .....++..++.+.+++.+ +.|.+.+|+|+.++-..++...+ +.+..+
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl-g~D~~R~t~GARe~KfavMhal~---~~gd~v 103 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL-GMDEVRVTAGAREAKFAVMHALC---KEGDWV 103 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh-CCceeeecccchhhHHHHHHHhc---cCCCEE
Confidence 3566777777776444221 1123456677777777766 67899999999999988886552 445677
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHH----cCCCCeEEEEEcccCCCCCc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE----NNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~----~~~~~~~~~~~~~~~~~~g~ 155 (368)
+.++..|-++..+....|..+...+ ..+. +.+.+ +++...+.|. +..+.+++.++..+.++.|+
T Consensus 104 V~D~~aHYttyvAAEragl~v~eVp---~tg~------Pey~i---~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN 171 (382)
T COG1103 104 VVDSLAHYTTYVAAERAGLNVAEVP---NTGY------PEYKI---TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN 171 (382)
T ss_pred EEcCcchHHHHHHHHhcCCeEEecC---CCCC------CceEe---cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC
Confidence 7788888776666666665443221 2221 12222 4555555544 33356788888888899999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhc-CC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVA-PA 232 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~-~~ 232 (368)
+.+ -++++++|+++|++++..-+|+ .|.. ....-...+|++.-| |++++.-|||.+..+++..+.+. ..
T Consensus 172 l~D----akkva~ic~e~gvPlllN~AYt---~Grm-pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S 243 (382)
T COG1103 172 LAD----AKKVAKICREYGVPLLLNCAYT---VGRM-PVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS 243 (382)
T ss_pred chh----hHHHHHHHHHcCCceEeeccee---eccc-cccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc
Confidence 888 8999999999999999999996 3432 122334566876555 88886569999999988876643 22
Q ss_pred CC-------ccccccCCC-CHHHHHHHHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHH--HhcCCceEEeeccc-eEE
Q 017633 233 GP-------MYQAGTLSG-NPLAMTAGIHTLKRLK-E-PGTYEYLNKITGELTQGIIDAG--KKAGHAICGGYISG-MFG 299 (368)
Q Consensus 233 ~~-------~~~~~t~~~-~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~-~~~ 299 (368)
+. -..+-|..+ +.+.+.| ++-... . ..| +.--++.+.+...|+++. .+++.. +..+ +..
T Consensus 244 g~~~~~KEvellGCT~rGapivTlmA---SfP~V~eRVkrW-deEv~kaR~fv~elEkigg~~qlG~r----Pk~HdLm~ 315 (382)
T COG1103 244 GRAFPKKEVELLGCTVRGAPIVTLMA---SFPHVVERVKRW-DEEVEKARWFVAELEKIGGVKQLGER----PKNHDLMK 315 (382)
T ss_pred ccccccceeeeecccccCchHHHHHh---cCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHhCCC----Ccccceee
Confidence 22 111222222 2222222 332211 1 223 333455667777787764 122211 1111 112
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeee-cCCCCCcccc-ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF-APSQFEAGFT-SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~~~~~~~~-~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
|+- +. |...........--+++.|+++||.- .+|-...+-+ .+..++|+++..+++++++++++
T Consensus 316 Fet--p~---f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 316 FET--PV---FHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ecC--ch---HHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 211 00 00000000000123567788888653 3443333333 46789999999999999998763
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.43 E-value=3.9e-11 Score=107.77 Aligned_cols=295 Identities=11% Similarity=0.017 Sum_probs=161.1
Q ss_pred ChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh--hhhhcCCC-ccccCC
Q 017633 32 CLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP--FLVKAGSG-VATLGL 105 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 105 (368)
.+...++.+.+.++++ + .+-++++.|||.+++.++..+.. .+++++++. + ++|.... .....|.+ +.....
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-~~g~~vLv~-g-~FG~r~~~eia~~~g~~~v~~l~~ 114 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-CRGVDVLAW-E-SFGKGWVTDVTKQLKLPDVRVLEA 114 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-CCCCeEEEE-C-HHHHHHHHHHHHhcCCCCcEEEcC
Confidence 3567778888888886 2 23467799999999999976532 245667764 3 5554322 22222321 222111
Q ss_pred CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 106 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
+....+ |+++++. + .. +++.++-..+|...+ +++++..+ ++.++|+|-+-+
T Consensus 115 ~~g~~~--------------~~~~ve~--~---~~---v~~vhnETSTGv~np----v~~i~~~~--~~~lliVDavSs- 165 (374)
T TIGR01365 115 EYGKLP--------------DLKKVDF--K---ND---VVFTWNGTTSGVRVP----NGDFIPAD--REGLTICDATSA- 165 (374)
T ss_pred CCCCCC--------------CHHHcCC--C---CC---EEEecCCCchheecc----cccccccc--CCCcEEEEccch-
Confidence 111111 6777762 1 12 445555566788887 65554322 589999996664
Q ss_pred hhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHHhcCCCCc-------------------cccc-cCCC
Q 017633 186 FRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM-------------------YQAG-TLSG 243 (368)
Q Consensus 186 ~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~-------------------~~~~-t~~~ 243 (368)
+ .+..+.++ + .|++ +..|++++.-.+|+++++++.++.......+ .... .+++
T Consensus 166 ~-g~~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP 240 (374)
T TIGR01365 166 A-FAQDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTP 240 (374)
T ss_pred h-cCCCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCCh
Confidence 1 22333333 2 4544 5569999555788999999887665531110 0112 2334
Q ss_pred CHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcC-CceEE----eeccceEEEEeecCCCcccchhcccc
Q 017633 244 NPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAG-HAICG----GYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
+.....++..+++.+.++ + .+...++.+...+.+++.....+ +.... ........+.+..+.+++.. .. .
T Consensus 241 ~v~~l~a~~~~l~~i~~egG-le~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~--~~-~ 316 (374)
T TIGR01365 241 SMLCVEDWLDALKWAESIGG-LKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALD--ED-A 316 (374)
T ss_pred HHHHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccc--cc-h
Confidence 445666666777666554 4 33444444444444444444444 22111 11122233333111000000 00 0
Q ss_pred cHH-HHHHHHHHHHcCeeecCCCC----Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 318 TTK-FARFYRGMLEEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~-~~~~~~~l~~~Gi~~~~~~~----~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+ ..++.+.|.++||.+.++.. ..+|+ .-.++.+|++.+++.|+=+...
T Consensus 317 ~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 317 QADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred hhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 111 47899999999999987743 23454 3457999999999999865543
No 358
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.43 E-value=4.9e-11 Score=109.75 Aligned_cols=264 Identities=20% Similarity=0.158 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHcCC----CCCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcC-----------C
Q 017633 13 QVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTG-----------R 75 (368)
Q Consensus 13 ~v~~a~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~-----------~ 75 (368)
...+.+...+.++. .+....+.+.++...++++++ ....-.+|+|||+|+..++.+++.... +
T Consensus 77 ~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~ 156 (460)
T COG0076 77 VAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGG 156 (460)
T ss_pred HHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCC
Confidence 45555555555532 122345678888888999886 345688999999999999988764321 1
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE--EEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA--IILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~--~~~~~~~~~~ 153 (368)
...|+.+...|.+...+....|-+.........+... |++++++++.+. +.. ++..-....+
T Consensus 157 ~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~i-------------d~~~l~~~i~~~---t~~g~vV~~aGtT~~ 220 (460)
T COG0076 157 KPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRI-------------DVDALEEAIDEN---TIGGVVVGTAGTTDT 220 (460)
T ss_pred CCeEEecCcchhHHHHHHHHhCCCceeEEeccCcccc-------------CHHHHHHHHHhh---ccCceEEEEecCCCC
Confidence 2257777889998888888887765433222111111 899999999953 333 5555555556
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccccCC-Ccchhh--hhhhccCCccceeeeehHH--H
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--I 225 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~~--~ 225 (368)
|.+-+ +++|+++|+++++++++|.++.|+ . ......+ .+++ ..|-++ +-|......++|+++.++. +
T Consensus 221 G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l 295 (460)
T COG0076 221 GSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEAL 295 (460)
T ss_pred CccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCCCCceEEEEECHHHh
Confidence 77777 999999999999999999999876 2 1111110 0122 223333 3488777789999977543 4
Q ss_pred HHHhcCCCCcccc------ccC--CCCHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcC-CceEEee
Q 017633 226 MEMVAPAGPMYQA------GTL--SGNPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAG-HAICGGY 293 (368)
Q Consensus 226 ~~~~~~~~~~~~~------~t~--~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~ 293 (368)
.+.+... ..+.. .+. +-+.-...++...++.+..+++ .++..++++++++.+++. + +.....+
T Consensus 296 ~~~~~~~-~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~----~~~e~~~~p 370 (460)
T COG0076 296 RRILIFA-DYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL----GDFELVNEP 370 (460)
T ss_pred hhhhhcc-cccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC----CCcEeecCC
Confidence 4443311 11111 111 1222245555566676655554 344446666666666653 3 3333334
Q ss_pred ccceEEEEe
Q 017633 294 ISGMFGFFF 302 (368)
Q Consensus 294 ~~~~~~~~~ 302 (368)
..+.+.+..
T Consensus 371 ~l~~V~fr~ 379 (460)
T COG0076 371 ELPIVAFRL 379 (460)
T ss_pred ccceEEEEc
Confidence 455556554
No 359
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.2e-11 Score=106.15 Aligned_cols=306 Identities=14% Similarity=0.099 Sum_probs=164.4
Q ss_pred CcHHHHHHHHHHHHcC---CCCCCCCh----hHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 10 SYLQVLAALGETMKKG---TSFGAPCL----LENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---~~~~~~~~----~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
-+.++++.....+..- .+-+..+. .....++.+.+.=+ +++++++|.|++.|+...+.+... ..++.|+
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-~~~~Gvl 165 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-GKKTGVL 165 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-CCCCceE
Confidence 4456666666655541 11122223 34444444444332 578999999999999999987754 3677899
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~ 156 (368)
++-+-|.-+. +.+.+.+...+..++....++.. |.++|++.+.+. -+..++++++|.|++ |.+
T Consensus 166 iPiPQYPLYs-Ati~l~~~~~v~YyLdEe~~W~l------------d~~el~~~~~eA~k~i~~r~lvvINPGNPT-Gqv 231 (475)
T KOG0258|consen 166 IPIPQYPLYS-ATISLLGGTQVPYYLDEESNWSL------------DVAELERSVDEARKGINPRALVVINPGNPT-GQV 231 (475)
T ss_pred eecCCCchhH-HHHHHhCCcccceeeccccCCCC------------CHHHHHHHHHHHhccCCceEEEEECCCCcc-chh
Confidence 9888887654 44444444333222333334322 788888888752 233557777776554 444
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-h-cc-cCcccc----ccC-CCc------chhhhhhhccC--Cccceee-
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-R-LA-YGGAQE----YFG-VTP------DLTTLGKIIGG--GLPVGAY- 219 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~-~g-~~~~~~----~~~-~~~------di~s~sK~~~~--G~~iG~v- 219 (368)
.. ++-+++|..+|.+++++|+.||+|.+- + .+ .+.++. +++ -.+ .+.+.||++.| |.|-|++
T Consensus 232 ls-~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 232 LS-EENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred hc-HHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 44 444999999999999999999999654 3 22 222222 122 112 13467899984 8999998
Q ss_pred eeh--HHHHHHhcCCCCccccccCCCCHHHHHHHH----------HHHHH--HccCCHHHHHHHHHHHHHHHHHHHHHhc
Q 017633 220 GGR--RDIMEMVAPAGPMYQAGTLSGNPLAMTAGI----------HTLKR--LKEPGTYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 220 ~~~--~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~----------~~l~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
+.+ ++..+.+....+..... +..++.... ..++. -+.++....++++++.+.+.++. .
T Consensus 311 v~n~~prv~~qi~Kl~si~lc~----~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns----~ 382 (475)
T KOG0258|consen 311 SLNRDPRVKQQIKKLASIKLCP----QVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNS----L 382 (475)
T ss_pred cccCChhHHHHHHHHHhhhhcC----CccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhh----c
Confidence 442 34433332110000000 000110000 00000 01234455566666655555554 4
Q ss_pred CCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC
Q 017633 286 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ 339 (368)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~ 339 (368)
.........|.|+.|.-..-+.+....++.....-..-++..|++. ||.+.||+
T Consensus 383 ~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 383 EGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGS 437 (475)
T ss_pred CceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCC
Confidence 4444556667776664332221111111100000013456777765 99999984
No 360
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.40 E-value=1.1e-12 Score=113.78 Aligned_cols=196 Identities=21% Similarity=0.180 Sum_probs=120.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC-CCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC-YHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~-~~~~ 88 (368)
++|++++++.+....... |..++...++.+.++++++.. ..+|++|||.|+.++++... .+.+.|++...+ .+.+
T Consensus 7 ~~~~m~~a~~~a~~gd~~-Yg~D~~~~~l~~~i~~l~g~e-~a~f~~sGT~An~~al~~~~--~~~~~vi~~~~aHi~~~ 82 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDA-YGEDPTTARLEERIAELFGKE-AALFVPSGTMANQLALRAHL--RPGESVICADTAHIHFD 82 (290)
T ss_dssp S-HHEEHHHHHTTSB-CC-TTSSHHHHHHHHHHHHHHTSS-EEEEESSHHHHHHHHHHHHH--HTTEEEEEETTEHHHHS
T ss_pred CCHHHHHHHHccccCCcc-cCCChhHHHHHHHHHHHcCCC-EEEEeCCCChHHHHHHHHHH--hcCCceeccccceeeee
Confidence 678999999554433333 446788999999999999754 55688899999999998775 356667775442 2223
Q ss_pred chhhh-hhcCCCccccCCCCCC-CCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 89 ADPFL-VKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
...+. ...|.++.. ++..+ +.+ |+++|++.+.. |..+++++.++...+..|...++.+++
T Consensus 83 E~ga~~~~~G~~~~~--l~~~~~G~l-------------~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el 147 (290)
T PF01212_consen 83 ETGAIEELSGAKLIP--LPSDDDGKL-------------TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL 147 (290)
T ss_dssp STTHHHHHTTCEEEE--EBECTGTBB--------------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred ccchhhHhcCcEEEE--CCCcccCCC-------------CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence 23333 334443321 22222 333 89999999987 445788888888777755556666679
Q ss_pred HHHHHHHHHhCCEEEEehhhhch---hcccCccccccCCCcchhhh--hhhccCCccceee-eehHHHHHH
Q 017633 164 NAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAY-GGRRDIMEM 228 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~---~~g~~~~~~~~~~~~di~s~--sK~~~~G~~iG~v-~~~~~~~~~ 228 (368)
++|.++|++||+.|++|-+-..- ..+. ....+-...|.+++ +|.+ |.++|.+ ++++++++.
T Consensus 148 ~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~--g~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 148 RAISELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNG--GAPGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT---SSSEEEEEESHHHHHH
T ss_pred HHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEccc--ccccceEEEechHHHHH
Confidence 99999999999999999553110 0111 11111123466654 4654 4467766 667775443
No 361
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.40 E-value=4.8e-11 Score=113.76 Aligned_cols=311 Identities=11% Similarity=0.014 Sum_probs=178.9
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCC--
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-- 108 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 108 (368)
++....+..+..++.|+.....+++||.|.++..++..+ .+++|.| +++.+-|.+...++.+.|...++.. |..
T Consensus 193 ~~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~--~~~Gd~V-LvdRN~HKSv~~aLilsga~PVYl~-P~~n~ 268 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYA--APAGSTL-LIDRNCHKSLAHLLMMSDVVPIWLK-PTRNA 268 (713)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHh--cCCCCEE-EeecccHHHHHHHHHHcCCeeEEec-ccccc
Confidence 456677777778888875556677776677777777655 2455555 4688999999988888877543221 111
Q ss_pred CCCCCCCCCcccccCC--CCHHHHHHHHHcCCCC---eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE-EEehh
Q 017633 109 PGVPKGATYETLTAPF--NDVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL-IFDEV 182 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~--~d~~~le~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~l-i~De~ 182 (368)
.+++ -.++. -+.+.+++.++++++. .++++.+|.+ .|.... ++.|.++| |+.+ ++|||
T Consensus 269 ~Gi~-------g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 269 LGIL-------GGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred cCCc-------CCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEecc
Confidence 1110 00111 1458999999987643 3567776655 687787 88999988 6776 69999
Q ss_pred hhch-hcccCcc-cccc--CCCcchh---hhh--hhccCCc-cceeeeehHHHH-HHhcCCCCccccccCCCCHHHHHHH
Q 017633 183 MTGF-RLAYGGA-QEYF--GVTPDLT---TLG--KIIGGGL-PVGAYGGRRDIM-EMVAPAGPMYQAGTLSGNPLAMTAG 251 (368)
Q Consensus 183 ~~~~-~~g~~~~-~~~~--~~~~di~---s~s--K~~~~G~-~iG~v~~~~~~~-~~~~~~~~~~~~~t~~~~~~~~~a~ 251 (368)
|.+. .....+. .... +-.+|.+ +.| |.++ ++ ..+++..+..+- +.++. .+....|.|++.+-+++.
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~-alTQaS~iHvk~~vd~~~~n~--a~~m~~STSPsY~LmASL 409 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA-AFSQASLIHIKGEYDEETFNE--AFMMHTSTSPSYPIVASV 409 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc-ccchheeeeecCCCCHHHHHH--HHHHHcCCCcHHHHHHHH
Confidence 9543 2222111 1111 1135655 445 7775 33 444554432211 12221 222445568888888888
Q ss_pred HHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEe------ecc--------ceEEE--------EeecC
Q 017633 252 IHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAICGG------YIS--------GMFGF--------FFTEG 305 (368)
Q Consensus 252 ~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~------~~~--------~~~~~--------~~~~~ 305 (368)
..+.++++. ..+.++..+.+..+|+.+.++.... ++...+- ... .+.++ .+.+.
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~ 489 (713)
T PRK15399 410 ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPV 489 (713)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCc
Confidence 888777753 3467778888888888887753210 0000000 000 00000 00000
Q ss_pred CC--cccchh----cccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHH
Q 017633 306 PV--YNFEDA----KKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 306 ~~--~~~~~~----~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~ 364 (368)
++ ...... ....+..+..++++|.++||.+.-.+...+ .++...+++++++++++|.++
T Consensus 490 KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 490 KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00 000000 000123357889999999999987765544 347788999999999998865
No 362
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.38 E-value=2.7e-11 Score=115.52 Aligned_cols=313 Identities=9% Similarity=0.009 Sum_probs=177.2
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCcccc-CCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDSP 109 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 109 (368)
++....+..+..++.|+.....+++||.|.++..++..+ .+++|. ++++.+-|.+...++.+.|...++. +.-...
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~--~~~Gd~-VLvdRN~HKSv~haLilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYS--APAGST-VLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHh--cCCCCE-EEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 456667777778888865556667766667777666655 244554 5568899999998888887754321 111011
Q ss_pred CCCCCCCCcccccCC--CCHHHHHHHHHcCCCCe---EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 110 GVPKGATYETLTAPF--NDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~--~d~~~le~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
+++ -.++. -+.+.+++.++++++.. .+++.+|.+ .|.... ++.|.++|+.++ +++||||.
T Consensus 270 Gi~-------g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 270 GIL-------GGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred CCc-------cCCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccch
Confidence 110 01111 14899999999876433 477777766 688888 999999999887 68999995
Q ss_pred ch-hcccCcc-ccccCCCc---c--hhhhh--hhccCCc-cceeeeehHHH-HHHhcCCCCccccccCCCCHHHHHHHHH
Q 017633 185 GF-RLAYGGA-QEYFGVTP---D--LTTLG--KIIGGGL-PVGAYGGRRDI-MEMVAPAGPMYQAGTLSGNPLAMTAGIH 253 (368)
Q Consensus 185 ~~-~~g~~~~-~~~~~~~~---d--i~s~s--K~~~~G~-~iG~v~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~~ 253 (368)
+. .....+. ........ | +++.| |.++ ++ .-+++..+..+ .+.+.. .+....|.|++.+-+++...
T Consensus 335 ah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~-alTQaS~LHvkg~vd~~~~n~--a~~m~~STSPsY~l~ASLD~ 411 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA-AFSQASMIHVKGDVNEETFNE--AYMMHTTTSPHYGIVASTET 411 (714)
T ss_pred hhhccCcccCCcChhhcCCCCCCceEEEEchhhccc-chhHHhHHHHcCCCCHHHHHH--HHHHHcCCCcHHHHHHHHHH
Confidence 43 2222111 11111111 3 55555 7775 33 23333332111 011110 12244555788888888888
Q ss_pred HHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeecc--------------ceEEE--------EeecCC-
Q 017633 254 TLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYIS--------------GMFGF--------FFTEGP- 306 (368)
Q Consensus 254 ~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~--------------~~~~~--------~~~~~~- 306 (368)
+..+++. +.+.++..+.+..+|+.+.++.... ++...+-... .+.++ .+.+.+
T Consensus 412 a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Kl 491 (714)
T PRK15400 412 AAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKV 491 (714)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceE
Confidence 8777753 3467778888888888887742100 0000000000 00000 000000
Q ss_pred -Ccccchhcc----cccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHH
Q 017633 307 -VYNFEDAKK----SETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 307 -~~~~~~~~~----~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~ 364 (368)
+........ ..+..+..++++|.++||.+.-.+...+ .++...++++++.++++|.++
T Consensus 492 ti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 492 TLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred EEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 000000000 0112256788999999999987765543 357788999999999998865
No 363
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.38 E-value=9.4e-11 Score=106.85 Aligned_cols=300 Identities=16% Similarity=0.202 Sum_probs=192.2
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh-----cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~-----~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
+...+|.+.|+++.+...-.+-.+||.++-+..++..|.| .+..+|...+-+.||...+.....|-++.......
T Consensus 582 ~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~ 661 (1001)
T KOG2040|consen 582 QLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDA 661 (1001)
T ss_pred HHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccC
Confidence 3455677777777654445566788999888888887766 24678888899999998888888888765444433
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh----
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM---- 183 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~---- 183 (368)
..++ |..+|.....+|.++.+++++ +.+++.|..-+. +++++++.++||.-++.|-+-
T Consensus 662 ~G~i--------------d~~dLk~kaekh~~~Laa~Mv-TYPST~GvfE~~---i~d~cd~iHehGGQVYlDGANMNAq 723 (1001)
T KOG2040|consen 662 NGNI--------------DMVDLKAKAEKHKDNLAALMV-TYPSTHGVFEEG---IDDICDIIHEHGGQVYLDGANMNAQ 723 (1001)
T ss_pred CCCc--------------cHHHHHHHHHHhhhhhheeEE-eccccccccccc---HHHHHHHHHhcCCEEEecCCCccce
Confidence 3333 889999888887777776666 344445543332 999999999999999999544
Q ss_pred hch-hcccCccccccCCCcchh--hhhhhc----c-CCccceeeeehHHHHHHhcCCCCccc------------cccCCC
Q 017633 184 TGF-RLAYGGAQEYFGVTPDLT--TLGKII----G-GGLPVGAYGGRRDIMEMVAPAGPMYQ------------AGTLSG 243 (368)
Q Consensus 184 ~~~-~~g~~~~~~~~~~~~di~--s~sK~~----~-~G~~iG~v~~~~~~~~~~~~~~~~~~------------~~t~~~ 243 (368)
.|+ +.|.. ..|++ -+-|.| | ||..+|-+.+.++++..+...-.... ++..-+
T Consensus 724 VGlc~pGd~--------GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~G 795 (1001)
T KOG2040|consen 724 VGLCRPGDI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWG 795 (1001)
T ss_pred ecccCCccc--------cccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCC
Confidence 444 33332 22443 233555 4 45889999999998877753221110 111112
Q ss_pred CHHHHHHHHHHHHHHccCCHHH---HHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYE---YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
+..-....++-++++...++.+ -..-++.+...+|+.- ++. ...+....+.-++ |.+...+|...+.+
T Consensus 796 sa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h---Yki--l~~~~~~~vaHEF----IlD~r~fK~~agie 866 (1001)
T KOG2040|consen 796 SALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH---YKI--LFRGENGLVAHEF----ILDLRPFKKTAGIE 866 (1001)
T ss_pred cceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc---cce--eEecCCcceeeee----eeechhhccccCCc
Confidence 3344445566777777665532 3445667777777663 221 2222222333333 33334444445567
Q ss_pred HHHHHHHHHHcCeeecCCCCCcc-c----cccCCCHHHHHHHHHHHHHHHhh
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAG-F----TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~-~----~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+++++|.+.|+......+|.- + +.-.-+.+|++++|+++-.+-++
T Consensus 867 avDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 867 AVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred HHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 88999999999999887766642 2 33445778999999998776543
No 364
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.37 E-value=3e-10 Score=95.70 Aligned_cols=321 Identities=16% Similarity=0.059 Sum_probs=185.3
Q ss_pred eeccCCCcHHHHHHHHHHHHcC--------CCCC--CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh
Q 017633 4 LIILFPSYLQVLAALGETMKKG--------TSFG--APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~--------~~~~--~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~ 72 (368)
-|.+|..++.+.+...+..... .... ..-+..+.|-.+++-+.+ ...++.++.|-+--+...+..+.+.
T Consensus 37 gnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~ 116 (407)
T COG3844 37 GNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRP 116 (407)
T ss_pred ccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhcc
Confidence 3778877766666555543331 1111 112344566666666676 6788888875555555555555555
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCC--CcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGAT--YETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
..++.||++++.-+.+-..... +.....+ .++..+ .++.+++++++ +.+++++...++
T Consensus 117 ~~~r~vIv~E~~~fpTdly~a~---------------g~~~~~~~~~~~~~~--~~P~~~~~~~~---dd~AvV~L~~V~ 176 (407)
T COG3844 117 QEGRRVIVSEGDNFPTDLYIAE---------------GLADLLGIGYDLEGV--IAPRALEEAIT---DDVAVVLLSHVN 176 (407)
T ss_pred CCCceEEeecCCCCCcchhhhc---------------chhhhhcccccceee--eChHHHHHhhc---cceEEEEecccc
Confidence 5678888887655543211110 1110000 011111 15778888888 689999999999
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhhhhccCCc-cceeeeehHHHHHH
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEM 228 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~sK~~~~G~-~iG~v~~~~~~~~~ 228 (368)
.-+|...+ +.+|-.++++||++++-|=+|+ .|.. .....+|.+--+.+-=|.++||. -.+++.+.++..+.
T Consensus 177 y~TGql~d----m~aiT~~AH~~galv~wDLAHs---aGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~ 249 (407)
T COG3844 177 YKTGQLLD----MRAITALAHQHGALVGWDLAHS---AGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRER 249 (407)
T ss_pred ccccceee----HHHHHHHHHhcCceEEeehhcc---cCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccc
Confidence 99999999 9999999999999999999995 2221 22223333222445559998553 34455443332222
Q ss_pred hcC--------CCCcccc------------ccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhc
Q 017633 229 VAP--------AGPMYQA------------GTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 229 ~~~--------~~~~~~~------------~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
..+ ..++.+. ...+.+-+++++...+++...+-+ ++++-....+++.+.++..-..+
T Consensus 250 ~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~ 329 (407)
T COG3844 250 SWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYY 329 (407)
T ss_pred cccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccC
Confidence 211 0111111 111345678888888888876533 33444444444444444322111
Q ss_pred CCce----EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc---ccCCCHHHHHHHH
Q 017633 286 GHAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT---SLAHSSDDIQHTI 358 (368)
Q Consensus 286 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~---~~~~~~~~i~~~~ 358 (368)
++.. .-...|.-+.+. .+...++.+.|.++||+.-......+++ +++.+-.|+=.++
T Consensus 330 ~l~l~tPr~~~~rGsqvS~~----------------hp~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV 393 (407)
T COG3844 330 GLTLVTPRAHEERGSQVSLY----------------HPHGYQVMQALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAV 393 (407)
T ss_pred CcEEeccchhhhccceeeEe----------------cCcHHHHHHHHHHcCccccccCCCeeeecCccceechhHHHHHH
Confidence 2111 111222222222 2345788999999999876554444443 7889999999999
Q ss_pred HHHHHHHhh
Q 017633 359 TAAEKVLRQ 367 (368)
Q Consensus 359 ~~l~~~l~~ 367 (368)
+.|++++++
T Consensus 394 ~~L~evL~t 402 (407)
T COG3844 394 DALEEVLDT 402 (407)
T ss_pred HHHHHHHHh
Confidence 999999865
No 365
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.36 E-value=1e-10 Score=104.76 Aligned_cols=306 Identities=17% Similarity=0.092 Sum_probs=159.0
Q ss_pred CcHHHHHHHHHHHHcCC-------CCCCCChh----HHHHHHHHHhhCC-CC---CeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 10 SYLQVLAALGETMKKGT-------SFGAPCLL----ENVLAEMVISAVP-SI---EMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~-------~~~~~~~~----~~~l~~~l~~~~~-~~---~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.+|.+++++...+.+-. .|+..++. +.-..++..++|+ .+ ..-+-..||+.|+..++..+ ..+
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL--l~p 109 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL--LKP 109 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH--T-T
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH--Hhh
Confidence 45666666665554411 12222333 2333444455555 31 23344558999998888766 357
Q ss_pred CceEEEEcCCCCCCchhhhhhcC-------CCccccCC--CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEE
Q 017633 75 RERIIKFEGCYHGHADPFLVKAG-------SGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 145 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~ 145 (368)
+|.|+..+....|+......... .......| ....... |.+++++.+.++ ++++++
T Consensus 110 GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~I-------------D~d~l~~~a~~~--kPklIi 174 (399)
T PF00464_consen 110 GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLI-------------DYDELEKLAKEH--KPKLII 174 (399)
T ss_dssp T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB--------------HHHHHHHHHHH----SEEE
T ss_pred cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeE-------------CHHHHHHHHhhc--CCCEEE
Confidence 89999998777666432222111 10111111 1111211 899999999976 778888
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchhhhh--hhccCCccceeeee
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 221 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~ 221 (368)
+-.... -...+ +++++++|++.|.+|+.|-+| +|+ -.|.. -+.+.. .|+++.| |+|. |.|.|.++.
T Consensus 175 ~G~S~y--~~~~d----~~~~reIad~vga~l~~D~sH~~GLIa~g~~--~~P~~~-ADvvt~sThKtl~-GPrggiI~~ 244 (399)
T PF00464_consen 175 CGASSY--PRPID----FKRFREIADEVGAYLMADISHIAGLIAGGLF--PNPFPY-ADVVTGSTHKTLR-GPRGGIILT 244 (399)
T ss_dssp EE-SST--SS-------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GCCT-SSEEEEESSGGG--SSS-EEEEE
T ss_pred ECchhc--cCccC----HHHHHHHHHhcCcEEEecccccccceehhee--cCcccc-ceEEEeecccccc-ccCceEEEE
Confidence 866542 22334 899999999999999999999 777 43322 122333 5787666 8886 558888888
Q ss_pred h--------------HHHHHHhcCCC-CccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHH
Q 017633 222 R--------------RDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGK 283 (368)
Q Consensus 222 ~--------------~~~~~~~~~~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 283 (368)
+ +++.+.+...- +..++ +......++...++....+ .++.+++.++++.|.+.|.+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg---~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~ 321 (399)
T PF00464_consen 245 NKGSKNVDKKGKEIDEELAEKIDSAVFPGLQG---GPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGF 321 (399)
T ss_dssp S-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-S---S--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred cCCccccCCcccccHHHHHHHhccccCCCccc---CcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 8 77887776310 11111 2233344444445554433 34667777788888777777532
Q ss_pred hcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC---------cccc------ccC
Q 017633 284 KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE---------AGFT------SLA 348 (368)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~---------~~~~------~~~ 348 (368)
+. . .-....+++++++... ..+..+..+.|.+.||.+....-| .+|+ ...
T Consensus 322 ~v--~-~ggTd~H~vlvd~~~~------------~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG 386 (399)
T PF00464_consen 322 KV--V-TGGTDNHQVLVDLRSF------------GIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRG 386 (399)
T ss_dssp EE--G-GGS-SSSEEEEEGGGG------------TS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT
T ss_pred EE--E-ECCCCCCeEEEEeccc------------ccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCC
Confidence 22 1 1113345778877531 223567778888889998543111 1232 356
Q ss_pred CCHHHHHHHHHH
Q 017633 349 HSSDDIQHTITA 360 (368)
Q Consensus 349 ~~~~~i~~~~~~ 360 (368)
+.++|++++-+.
T Consensus 387 ~~e~dm~~iA~~ 398 (399)
T PF00464_consen 387 MKEEDMKEIAEL 398 (399)
T ss_dssp --HHHHHHHHHH
T ss_pred CCHHHHHHHHhh
Confidence 677887776554
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.35 E-value=3e-10 Score=104.25 Aligned_cols=306 Identities=12% Similarity=0.031 Sum_probs=166.2
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCC-ccccCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSP 109 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 109 (368)
+.....+..+..++.++.....+++||-|.|+...+..+ .+++|.|+ ++.+.|.+....+.++|.. +...+.. +
T Consensus 68 p~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~--~~~GD~VL-vdRN~HKSi~~glilaGa~Pvyl~p~~--n 142 (557)
T COG1982 68 PEGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAV--LTPGDKVL-VDRNCHKSIHHGLILAGATPVYLEPSR--N 142 (557)
T ss_pred CCccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhh--cCCCCEEE-ecCCccHHHHHHHHHcCCceEEecCCC--C
Confidence 456677888888888875566777776667777776655 34555554 5789999999888887773 2211110 0
Q ss_pred CCCCCCCCcccccCCC-CHHHHHHHHHcCCCC-eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch
Q 017633 110 GVPKGATYETLTAPFN-DVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF 186 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~-d~~~le~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~ 186 (368)
+.+.+... +.+.+++.+.+++.. ..+++.+|.+ .|.... +++|.++++++++++.+||+| ..+
T Consensus 143 --------p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~ 208 (557)
T COG1982 143 --------PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHF 208 (557)
T ss_pred --------ccccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcccc
Confidence 00111111 689999988887666 6677777766 688888 999999999999999999999 323
Q ss_pred -hcccCccccccCCCcchhhhh--hhccCCccceeeeehH-------HHHHHhcCCCCccccccCCCCHHHHHHHHHHHH
Q 017633 187 -RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRR-------DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 256 (368)
Q Consensus 187 -~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~-------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~ 256 (368)
..+... -...+...|+++.| |.+++.-..+++..++ .+.+.+. ...+.+++...+++...+-.
T Consensus 209 ~~~~~l~-~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~------~h~STSPsY~l~ASlD~Ar~ 281 (557)
T COG1982 209 DFSPMLP-ESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM------MHQSTSPSYPLMASLDVARM 281 (557)
T ss_pred cccccCc-chhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH------HHccCCchHHHHHHHHHHHH
Confidence 222221 12222345677777 5544333455565553 2222222 33444667777776666433
Q ss_pred HHccCC--HHHHHHHHHHHHHHHHHHHHHhcCCceEEeec-----cceEEEEeecCC---Ccccchhc-c-cccHHHHHH
Q 017633 257 RLKEPG--TYEYLNKITGELTQGIIDAGKKAGHAICGGYI-----SGMFGFFFTEGP---VYNFEDAK-K-SETTKFARF 324 (368)
Q Consensus 257 ~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~-~-~~~~~~~~~ 324 (368)
.....+ +.+....+.-.+++.+++.....++....... ..+-|+.-.... .++..... . ..+..+..+
T Consensus 282 ~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v 361 (557)
T COG1982 282 QEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIV 361 (557)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHH
Confidence 333222 32223333334444444433333311111100 001111111100 00000000 0 123346789
Q ss_pred HHHHHHcCeeecCCCCCcccc---cc-CCCHHHHHHHHHHHH
Q 017633 325 YRGMLEEGVYFAPSQFEAGFT---SL-AHSSDDIQHTITAAE 362 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~~~~~~---~~-~~~~~~i~~~~~~l~ 362 (368)
+++|+++|+...-.+...+.+ +. .....+++++++.++
T Consensus 362 ~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 362 AKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 999999999988876555432 22 223344445444444
No 367
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.31 E-value=2.7e-09 Score=95.70 Aligned_cols=326 Identities=13% Similarity=-0.015 Sum_probs=175.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE------EEcC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII------KFEG 83 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi------~~~~ 83 (368)
..++++++|.. +.-.+.-++...+|.+..+++++ .+.++++.+|..+...+++.... ++++.++ ++..
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~G-~E~alpthqGRgaE~Il~~~~~~-~~g~e~g~~~~~~~v~h 128 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIFG-YQYTIPTHQGRGAEQIYIPVLIK-KREQEKGLDRSKMVAFS 128 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHHHHHHhC-CceEEECCCCchHHHHHHHhhcc-cccccccccccccccce
Confidence 45566666654 22223345667899999999885 45788999999999998876643 1233333 2234
Q ss_pred CCCCCch-hhhhhcCCCccccC---------CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-CCCeEEEEEcccCCC
Q 017633 84 CYHGHAD-PFLVKAGSGVATLG---------LPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVGN 152 (368)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-~~~~~~~~~~~~~~~ 152 (368)
.+|-.+. +...+.|....... ...+++.. |+++|+++|+.+ +++...+.+.-.+|.
T Consensus 129 n~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~-------------dl~~le~~I~~~g~~~i~~v~~tlt~N~ 195 (467)
T TIGR02617 129 NYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNF-------------DLEGLERGIEEVGPNNVPYIVATITCNS 195 (467)
T ss_pred EEEEecchHHHHHcCceeecccchhhcccccCCCCCCCc-------------CHHHHHHHHhhcCCCCceeeeeeEEEec
Confidence 4444432 44455554321100 01122222 899999999863 234444444434455
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhh----ch-hccc----Ccccccc----CCCcch--hhhhhhccCCccce
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT----GF-RLAY----GGAQEYF----GVTPDL--TTLGKIIGGGLPVG 217 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~----~~-~~g~----~~~~~~~----~~~~di--~s~sK~~~~G~~iG 217 (368)
.|....+.+.++++.++|++||+.++.|-+-. .| ...+ ..+...+ --..|. +|+||.++. ++|
T Consensus 196 ~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA--pvG 273 (467)
T TIGR02617 196 AGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV--PMG 273 (467)
T ss_pred CCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC--ccc
Confidence 56666677779999999999999999995441 11 1000 0111111 011243 467788764 677
Q ss_pred ee-eeh-H---HHHHHhcCCCCccc-cccCCC-CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 218 AY-GGR-R---DIMEMVAPAGPMYQ-AGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 218 ~v-~~~-~---~~~~~~~~~~~~~~-~~t~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
.+ +++ + ++.+..+.....+- ..||++ +---+.+....++...+++++++.....+++.++|.+ .|.+..
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~----~Gvpi~ 349 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEE----IGVVCQ 349 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHh----CCCcEE
Confidence 65 444 4 34444443222111 233332 3334444444555444566777777777777777766 456554
Q ss_pred EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCC------CC-----------ccc---cccCC
Q 017633 291 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FE-----------AGF---TSLAH 349 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~-----------~~~---~~~~~ 349 (368)
. ..|+-+.++-.. ..+.. ++..--+..++.+|- +.||....-| ++ .+| +.-.-
T Consensus 350 ~-~Gghav~iDa~~--~lphi---p~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvy 423 (467)
T TIGR02617 350 Q-AGGHAAFVDAGK--LLPHI---PADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATY 423 (467)
T ss_pred e-cCccEEEEehhh--hCCCC---ChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccc
Confidence 4 444433443322 10000 001111456676664 4465533211 11 012 23344
Q ss_pred CHHHHHHHHHHHHHHHh
Q 017633 350 SSDDIQHTITAAEKVLR 366 (368)
Q Consensus 350 ~~~~i~~~~~~l~~~l~ 366 (368)
|.++++...+++..+.+
T Consensus 424 t~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 424 TQTHMDFIIEAFKHVKE 440 (467)
T ss_pred cHhHHHHHHHHHHHHHh
Confidence 78999999999988764
No 368
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.27 E-value=9.9e-10 Score=99.33 Aligned_cols=174 Identities=24% Similarity=0.230 Sum_probs=108.6
Q ss_pred ChhHHHHHHHHHhhCC-C-------CCeEEEeCChHHHHHHHHHHHHHh-------cC----CceEEEEcCCCCCCchhh
Q 017633 32 CLLENVLAEMVISAVP-S-------IEMVRFVNSGTEACMGVLRLARAF-------TG----RERIIKFEGCYHGHADPF 92 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~-------~~~v~~~~~gt~a~~~al~~~~~~-------~~----~~~vi~~~~~~~~~~~~~ 92 (368)
++.+.++.++++++++ + ...-++|+|||+++..++.+++.. .+ .+.+++....-|-+...+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 3577888888999886 3 146889999999999999777633 11 234666677778877788
Q ss_pred hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC--CC-eEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 93 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK--GE-IAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
+...|.++...+......+ |+++|++.+.+.. .. +.+|+..-...++|.+-+ +++|+++
T Consensus 158 a~~lGlg~~~I~~~~~~~m--------------d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i 219 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRM--------------DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADI 219 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB---------------HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHH
T ss_pred cceeeeEEEEecCCcchhh--------------hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhh
Confidence 8877776544333221122 7899999887521 12 334444444445677666 9999999
Q ss_pred HHHhCCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCccceeeeehH
Q 017633 170 TKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR 223 (368)
Q Consensus 170 ~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~ 223 (368)
|++|++++++|.+|.|. ......-....++ ..|-++ .-|.++..+.+|+++.++
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~ 277 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRD 277 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESS
T ss_pred ccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeec
Confidence 99999999999999773 1111110001111 123232 449998888999997754
No 369
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.22 E-value=9.4e-09 Score=91.56 Aligned_cols=309 Identities=12% Similarity=-0.023 Sum_probs=175.2
Q ss_pred CcHHHHHHHHHHHHcCCC---------CCC--CChhHHHHHHHHHhhCC--CCCe-EEEeCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGTS---------FGA--PCLLENVLAEMVISAVP--SIEM-VRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~---------~~~--~~~~~~~l~~~l~~~~~--~~~~-v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
-|++|++++.+.+.+... +.. ..+...+..+.+.++++ +..+ +++..|||.+++.+...+ ..++
T Consensus 15 lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl--l~~g 92 (364)
T PRK12462 15 LPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF--SRPG 92 (364)
T ss_pred CCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc--CCCC
Confidence 456888888887766211 211 23567788888888886 2334 455566899999888655 2345
Q ss_pred ceEE-EEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERII-KFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++ ....++++....-.... | .+....... ..+...++ +++++ +.. ++.+.+.+.++...+
T Consensus 93 ~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~--------~~~~~~~p--~~~~~----~~~-~d~~~v~~t~NETst 156 (364)
T PRK12462 93 AAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGA--------ASGYRTLP--SLAEL----DWD-ARAPFRHYVSNETVE 156 (364)
T ss_pred CcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcC--------CCCCCcCC--CHHHh----ccC-CCCcEEEEccCCCCc
Confidence 5555 55556656443322221 2 111110000 00111111 34443 221 245667777777777
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
|...+ ++.+.+++++|+|-+-+ + .+....++.| |++ +..|+++ .-+++.++.++++++....
T Consensus 157 Gv~~~---------~~~~~~~~llvvD~sS~-~-~s~pid~~~~----dvi~agsQKnlg-P~Gltvvivs~~al~~~~~ 220 (364)
T PRK12462 157 GLQFP---------DAAGLPDSPLIADMSSD-F-MSRPFDVEAY----GMVYAHAQKNLG-PAGVTVAIIRRALLERVPD 220 (364)
T ss_pred eEecC---------cccccCCCeEEEEcCch-h-hCCCCChHHc----cEEEeeccccCC-CCceEEEEECHHHHhhccc
Confidence 87665 22233799999996653 1 2233444555 544 4569998 3357788999988876553
Q ss_pred CCCcc--------ccccC-CCCHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHhcC-Cce---EEeeccc
Q 017633 232 AGPMY--------QAGTL-SGNPLAMTAGIHTLKRLKEP--GTYEYLNKITGELTQGIIDAGKKAG-HAI---CGGYISG 296 (368)
Q Consensus 232 ~~~~~--------~~~t~-~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~-~~~---~~~~~~~ 296 (368)
..+.+ ..+++ +++....+++..+++.+.++ + ++.+.++.+...+.+.+...... +.. .......
T Consensus 221 ~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GG-l~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 221 TLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGG-VHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred cCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 22211 12333 56677888888999988665 4 34455555555555555544433 211 1111111
Q ss_pred -eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cccccc--cCCCHHHHHHHHHHHHHHHh
Q 017633 297 -MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFTS--LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 297 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~~--~~~~~~~i~~~~~~l~~~l~ 366 (368)
-+.|.+ +++....+|.+.+.++|+.-.-|.. ..+|.+ -.++.+.++.+++-+++.-+
T Consensus 300 mnv~f~~-------------~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 300 MNVAFRF-------------RQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ceEEEEc-------------CCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 223322 2445568899999999988866532 223443 45699999999999887654
No 370
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.17 E-value=1e-08 Score=101.94 Aligned_cols=300 Identities=11% Similarity=0.130 Sum_probs=161.8
Q ss_pred cHHHHHHHHHHHHcCCCCC-CCC-------hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc-CCceEEE
Q 017633 11 YLQVLAALGETMKKGTSFG-APC-------LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT-GRERIIK 80 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~-~~~-------~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~-~~~~vi~ 80 (368)
|+.+++++.+...-.+.|+ |.. +...++...++++.+ +.+++.++.++|.+.+.++.....-. ++++|++
T Consensus 118 P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlV 197 (993)
T PLN02414 118 PPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLI 197 (993)
T ss_pred CHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEE
Confidence 3555577766544322232 211 234567777888888 77889999999999998775443222 3466777
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.+..|..+........ ...+.+++.++..+.+ ... +.+..++ ..+++.+|.+.+
T Consensus 198 s~~~hP~~~~v~~t~a----------------~~~GieV~~v~~~~~~----~~~---~~v~~vl-vq~P~~~G~v~d-- 251 (993)
T PLN02414 198 ASNCHPQTIDVCQTRA----------------DGLGLEVVVADEKDFD----YSS---GDVCGVL-VQYPATDGEVLD-- 251 (993)
T ss_pred cCccCHhHHHHHHHhh----------------hhcCCEEEEecchhhc----ccc---CceEEEE-EecCCCCeEEcC--
Confidence 6665554433322211 1112233333321211 111 2344443 455566888888
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhh--hhhc---c-CCccceeeeehHHHHHHhcC--C
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKII---G-GGLPVGAYGGRRDIMEMVAP--A 232 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~--sK~~---~-~G~~iG~v~~~~~~~~~~~~--~ 232 (368)
+++|+++||++|+++++ .++. +..+..-....+| .|+++. -|.. | ||...|++.+++++.+.+.. .
T Consensus 252 --v~~I~~~ah~~GaL~iV-aad~-lal~~l~~pge~G--ADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriV 325 (993)
T PLN02414 252 --YAEFVKNAHANGVKVVM-ATDL-LALTMLKPPGEWG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRII 325 (993)
T ss_pred --HHHHHHHHHHcCCEEEE-EECH-HHhcCCCCHhhcc--CcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCccc
Confidence 99999999999999999 4441 1011111122333 365432 2443 2 45569999999888765541 1
Q ss_pred C--------Ccc------c-----cccCCCCHHHHHHHHHHHH-----HHccCCH---HHHHHHHHHHHHHHHHHHHHhc
Q 017633 233 G--------PMY------Q-----AGTLSGNPLAMTAGIHTLK-----RLKEPGT---YEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 233 ~--------~~~------~-----~~t~~~~~~~~~a~~~~l~-----~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
+ +.+ . .-..+.|..+..+..+++. .+...++ .+++.++..+++++|.+.
T Consensus 326 G~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~---- 401 (993)
T PLN02414 326 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL---- 401 (993)
T ss_pred CcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc----
Confidence 1 000 0 0011223322222222322 2223333 455666666777666543
Q ss_pred CCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHH
Q 017633 286 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~ 362 (368)
++.......-..+.+.+ + +..++.+.|.++||.++......+ ++....|++||+++++.|.
T Consensus 402 G~~~~~~~~f~~vt~~~--------------~--~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 402 GFQVQSLPFFDTVKVKC--------------S--DADAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred CCccCCCCCcCeEEEec--------------C--CHHHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHc
Confidence 32211111111222222 1 237789999999998886644433 4578889999999999996
No 371
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.05 E-value=2.7e-08 Score=99.41 Aligned_cols=275 Identities=13% Similarity=0.147 Sum_probs=152.1
Q ss_pred hHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC--CceEEEEcCCCCCCchhhhhh-cCCCccccCCCCCC
Q 017633 34 LENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSP 109 (368)
Q Consensus 34 ~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~--~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 109 (368)
...++...++++.+ +..++.+..++|.+.+.++...+ +.+ +++|++.+..|..+....... ...
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~----------- 189 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPL----------- 189 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhC-----------
Confidence 34466777888887 77788888899999997765443 333 367777666554433222211 111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
+.+++.++..+ +++ .+++.++ +.++++..|.+.+ +++|+++||++|+++++|-.+... +
T Consensus 190 ------G~ev~~~~~~~--d~~------~~~~~~v-lvq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al--~ 248 (954)
T PRK05367 190 ------GIEVVVGDAAK--ALD------HDDVFGV-LLQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL--T 248 (954)
T ss_pred ------CCEEEEecCcc--CCC------cccEEEE-EEecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc--c
Confidence 11222232211 111 1245444 4455667888888 999999999999999999766322 1
Q ss_pred cCccccccCCCcchh--hhhhh---cc-CCccceeeeehHHHHHHhcCC--C--------C-c------------ccccc
Q 017633 190 YGGAQEYFGVTPDLT--TLGKI---IG-GGLPVGAYGGRRDIMEMVAPA--G--------P-M------------YQAGT 240 (368)
Q Consensus 190 ~~~~~~~~~~~~di~--s~sK~---~~-~G~~iG~v~~~~~~~~~~~~~--~--------~-~------------~~~~t 240 (368)
-......+|. |++ +.-|. ++ ||...|++.+++++.+.+... + . + +...|
T Consensus 249 ~l~~pge~Ga--Di~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaT 326 (954)
T PRK05367 249 LLTPPGEMGA--DIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKAT 326 (954)
T ss_pred CCCChhhcCC--CEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccc
Confidence 1112233444 554 33354 22 455699999999888777521 1 0 0 00011
Q ss_pred CCCCH-HHHHHHHHH--HHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 241 LSGNP-LAMTAGIHT--LKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 241 ~~~~~-~~~~a~~~~--l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
....+ .+..++.++ +..+..+++ .++...+..+++++|.+. ++..........+.+.+
T Consensus 327 sNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~----G~~~~~~~~f~~~~~~~------------ 390 (954)
T PRK05367 327 SNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL----GLEVVHDSFFDTLTVEV------------ 390 (954)
T ss_pred cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc----CcccCCCCCCCeEEEeC------------
Confidence 11111 111222222 133434433 445666666666666542 22111111111112221
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l~ 362 (368)
. .+..++.++|+++||.++...... +.+....|++||+++++.|.
T Consensus 391 --~-~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 --G-GDAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred --C-CCHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 1 135789999999999996653333 34577889999999999996
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.03 E-value=5.7e-08 Score=85.61 Aligned_cols=219 Identities=16% Similarity=0.197 Sum_probs=132.6
Q ss_pred CcHHHHHHHHHHHHcCCC--CC-CCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC-
Q 017633 10 SYLQVLAALGETMKKGTS--FG-APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG- 83 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~--~~-~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~- 83 (368)
-+|++++++.+....... ++ .......++...-...++ +.+.+.++++-+.|+..++... ..+..+++.-+
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al---~~~~EvVis~g~ 115 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNAL---AEGKEVVVSRGE 115 (395)
T ss_pred CCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhh---ccCCeEEEEccc
Confidence 567888888887766321 11 112222333322222222 4678888888888888887544 22434555322
Q ss_pred ---CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEE--EcccCCCCCcccC
Q 017633 84 ---CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAP 158 (368)
Q Consensus 84 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~--~~~~~~~~g~~~~ 158 (368)
++|....-.+..+|.+.+-.. ..+. ....+++.+|++ ++++++ ..++++..+. .+
T Consensus 116 lV~gg~~~v~d~~~~aG~~l~EvG---~tn~-------------t~~~d~~~AIne---~ta~llkV~s~~~~f~~~-l~ 175 (395)
T COG1921 116 LVEGGAFRVPDIIRLAGAKLVEVG---TTNR-------------THLKDYELAINE---NTALLLKVHSSNYGFTGM-LS 175 (395)
T ss_pred cccCCCCChhHHHHHcCCEEEEec---ccCc-------------CCHHHHHHHhcc---CCeeEEEEeecccccccc-cc
Confidence 455555555555555443211 1111 158899999995 344333 3333333333 44
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcCCCCc
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
+++++++|++||+++++|.+-... + -..-.-..+...+|+++|| |.|+ |.+-|.+++++++++.+....
T Consensus 176 ----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~lq~~~-- 247 (395)
T COG1921 176 ----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKLQSHP-- 247 (395)
T ss_pred ----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHHHhhh--
Confidence 789999999999999999777432 2 1111223345678999999 8776 557889999999998887432
Q ss_pred cccccCCCCHHHHHHHHHHHHHHcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKE 260 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~ 260 (368)
..-.+.......++..++++....
T Consensus 248 -l~Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 248 -LKRALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred -hhhhhhcCcHhHHHHHHHHHHHcC
Confidence 233445667777888888887765
No 373
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.89 E-value=1.9e-09 Score=94.01 Aligned_cols=250 Identities=19% Similarity=0.198 Sum_probs=55.9
Q ss_pred eccCC--CcHHHHHHHHHHHHcCCCCCC--C----ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 5 IILFP--SYLQVLAALGETMKKGTSFGA--P----CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 5 ~~~g~--~~~~v~~a~~~~~~~~~~~~~--~----~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++|. -++++.+++.+....+....+ - -.-+..+.+.++.+. +.++.+++|+-..|+.+++..+. .+.
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt-gAeaA~VvNnnaAAv~L~l~~la---~~~ 86 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT-GAEAALVVNNNAAAVLLALNTLA---KGK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc---ccc
Confidence 45665 345677777766554322111 0 011233444444444 56778888888899988886542 345
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC---CHHHHHHHHHcCCCCeEEEEEcc-cCC-
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN---DVSALENLFENNKGEIAAIILEP-VVG- 151 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~le~~~~~~~~~~~~~~~~~-~~~- 151 (368)
+||+..+--- ..|..+. .+.+....|...+.+-.. .+++++++|+ ++|++++-.. .|.
T Consensus 87 EvIvsRGelV--------eiGgsFR------ip~vm~~sGa~lvEVGttN~t~~~Dye~AI~---e~Ta~ll~Vh~Sn~~ 149 (367)
T PF03841_consen 87 EVIVSRGELV--------EIGGSFR------IPDVMRQSGARLVEVGTTNRTHLSDYEKAIT---ENTAALLKVHTSNFR 149 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccc--------ccccccc------ccccccccccccccccccccccccccccccc---ccccccccccccccc
Confidence 6666543111 1111111 122333445555555432 4788999998 4676664443 332
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch----hcc---cCccccccCCCcchhhhh--hhccCCccceeeeeh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF----RLA---YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 222 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~----~~g---~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~ 222 (368)
..|..-.+. ++++++++++|++++|+|-.-..+ ..| +....+.....+|+++|| |-++| ...|.+++.
T Consensus 150 i~GFt~~~~--~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQaGiI~Gk 226 (367)
T PF03841_consen 150 IQGFTGEVS--LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQAGIIVGK 226 (367)
T ss_dssp -------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-EEEEEE
T ss_pred ccccccccc--HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CCeEEEEeC
Confidence 233222222 999999999999999999766222 111 222333455678999999 88764 457999999
Q ss_pred HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC--------------HHHHHHHHHHHHHHHHHHH
Q 017633 223 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG--------------TYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 223 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~--------------~~~~~~~~~~~l~~~l~~~ 281 (368)
+++++.++. ....-.+..+-...++..++++.+.+++ -.+.++++++.+...|...
T Consensus 227 k~lI~~lk~---~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 227 KELIEKLKK---HPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHHHHH---HHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred HHHHHHHhh---CCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 999998873 2233445667788888888887664311 1344555555555555553
No 374
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.86 E-value=3.3e-06 Score=74.50 Aligned_cols=285 Identities=15% Similarity=0.189 Sum_probs=157.5
Q ss_pred HHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCC
Q 017633 37 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 115 (368)
Q Consensus 37 ~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (368)
++...++++.+ +-...-+-..+|.+-+.++...+..+.+.+.++++..-|..+...+... .+..
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tr---------------a~~~ 188 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTR---------------AEGL 188 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhh---------------cccC
Confidence 44445666666 4444444556777767666655443333466666777777654443332 2233
Q ss_pred CCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--ehhhhchhcccCcc
Q 017633 116 TYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLAYGGA 193 (368)
Q Consensus 116 ~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~--De~~~~~~~g~~~~ 193 (368)
+.+++.++++|.+++++. .. ..+.++++.-++.-+..... ++++.+.+|++|.++++ |-.-.++ .-.
T Consensus 189 g~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L----L~p 257 (450)
T COG0403 189 GIEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL----LKP 257 (450)
T ss_pred ceEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc----cCC
Confidence 445666777788888888 42 36788887665533324444 99999999999988774 4222222 111
Q ss_pred ccccCCCcchh-----hhhhhcc-CCccceeeeehHHHHHHhcCC--C--------C---------------ccccccCC
Q 017633 194 QEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA--G--------P---------------MYQAGTLS 242 (368)
Q Consensus 194 ~~~~~~~~di~-----s~sK~~~-~G~~iG~v~~~~~~~~~~~~~--~--------~---------------~~~~~t~~ 242 (368)
...+|- |++ .|+=.++ ||..+|++.+.+++.+.+..+ + + -.-.++.+
T Consensus 258 PGe~GA--DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC 335 (450)
T COG0403 258 PGEFGA--DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC 335 (450)
T ss_pred ccccCC--ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh
Confidence 122333 443 3677777 788899999999887776521 0 0 01123333
Q ss_pred CCHHHHHHHHHHH-HHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccccc
Q 017633 243 GNPLAMTAGIHTL-KRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 243 ~~~~~~~a~~~~l-~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
.++...+.+.+.+ ..+..++ ..++..+...++.++|++. +.........+|-.+.+.. +.
T Consensus 336 TnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~----~~g~~~~~~~fFdt~~v~~------------~~ 399 (450)
T COG0403 336 TNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEI----GAGVELVFDHFFDTFTVRV------------PE 399 (450)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhc----CCceEeccccceeeEEEec------------ch
Confidence 4433333332222 2233333 3445555555565555543 2111121113333333321 11
Q ss_pred HHHHHHHHHHHHcCeeecCCCCCcc--ccccCCCHHHHHHHHHHHHHHH
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.....+.+.....|+-++......+ ++.-..++++++.+++.+....
T Consensus 400 ~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 400 EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 2345666666677888876544333 3345568999999999887643
No 375
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.83 E-value=9.3e-07 Score=84.16 Aligned_cols=233 Identities=13% Similarity=0.055 Sum_probs=134.3
Q ss_pred CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc-------C-C--------------------------
Q 017633 31 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT-------G-R-------------------------- 75 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~-------~-~-------------------------- 75 (368)
.+..+.++-+++++.++ +...-.+|+|||+|+..++.++|... . .
T Consensus 121 ~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~ 200 (608)
T TIGR03811 121 TSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLES 200 (608)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccc
Confidence 45788899999999997 44567789999999999998887531 0 0
Q ss_pred ---------------------ceEEEEcCCCCCCchhhhhhcCCC---ccccCCCCCCCCCCCCCCcccccCCCCHHHHH
Q 017633 76 ---------------------ERIIKFEGCYHGHADPFLVKAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALE 131 (368)
Q Consensus 76 ---------------------~~vi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 131 (368)
..+++.+..-|-+...+..+.|.+ +...++.....+ |+++|+
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rm--------------d~~~L~ 266 (608)
T TIGR03811 201 AGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRM--------------DINELE 266 (608)
T ss_pred cccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcC--------------CHHHHH
Confidence 004555556676666666665553 222222111112 899999
Q ss_pred HHHHc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH---HHhCC--EEEEehhhhch-hc---cc---Ccc---
Q 017633 132 NLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT---KENGA--LLIFDEVMTGF-RL---AY---GGA--- 193 (368)
Q Consensus 132 ~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~---~~~~~--~li~De~~~~~-~~---g~---~~~--- 193 (368)
+.+.+ ....+.+|+..-.....|.+-| +++|+++| +++|+ ++++|.+|.|+ .. .. ...
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~ 342 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDD 342 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccch
Confidence 88874 2123444555444444676666 88888888 77897 69999999774 11 00 000
Q ss_pred ----------c--------c----cc-CC-Ccchhh--hhhhccCCccceeeeehH-HHHHHhcCCCCccc---------
Q 017633 194 ----------Q--------E----YF-GV-TPDLTT--LGKIIGGGLPVGAYGGRR-DIMEMVAPAGPMYQ--------- 237 (368)
Q Consensus 194 ----------~--------~----~~-~~-~~di~s--~sK~~~~G~~iG~v~~~~-~~~~~~~~~~~~~~--------- 237 (368)
+ + .+ ++ ..|-+| .-|.+...+.+|.++.++ ++.+.+.....+..
T Consensus 343 ~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~ 422 (608)
T TIGR03811 343 LQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPAL 422 (608)
T ss_pred hhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCccc
Confidence 0 0 00 11 122233 338877778899887754 44444432111110
Q ss_pred --cccCCCCH--HHHHHHHHHHHHH--cc---CCHHHHHHHHHHHHHHHHHHH
Q 017633 238 --AGTLSGNP--LAMTAGIHTLKRL--KE---PGTYEYLNKITGELTQGIIDA 281 (368)
Q Consensus 238 --~~t~~~~~--~~~~a~~~~l~~~--~~---~~~~~~~~~~~~~l~~~l~~~ 281 (368)
..+..++. ..+.+...+++.+ .. ..+.++..+.++++.+.|++.
T Consensus 423 ~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 423 LGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 01122232 3355555666665 33 335666777777777777663
No 376
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.81 E-value=6.6e-07 Score=77.55 Aligned_cols=199 Identities=23% Similarity=0.297 Sum_probs=115.0
Q ss_pred HHHHHHHHHH-HHc-----CCCCCCCChhHHHHHHHHHhhCCCCCeE---EEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 12 LQVLAALGET-MKK-----GTSFGAPCLLENVLAEMVISAVPSIEMV---RFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 12 ~~v~~a~~~~-~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~v---~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
..|++|+++. +.. .+.||+.+..++.|.+-+++.++..+.. .+. |||-|+..++.-. .+++|..+...
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~v-SGTHAi~~~Lfg~--LrpGD~ll~~t 103 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFV-SGTHAIALALFGV--LRPGDELLSIT 103 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS--SHHHHHHHHHHHH----TT-EEEESS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhccccc-chHHHHHHHHHhc--CCCCCeEEEcC
Confidence 3466666542 111 2567888889999999999999632222 233 7999999998655 35788888766
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC-----CHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
+.=+-+....+...+. ..+-.+..+.....++.. |.+.++++++ ++++++++.-.-+=...-.
T Consensus 104 G~PYDTL~~VIG~~g~---------~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~R~s 171 (403)
T PF06838_consen 104 GKPYDTLEEVIGIRGN---------GPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK---PNTKMVLIQRSRGYSWRPS 171 (403)
T ss_dssp SS--CCHHHHHTSSSS---------SSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH---TTEEEEEEE-S-TTSSS--
T ss_pred CCchhhHHHHhCCCCC---------CCCChHHhCceeEEEeecCCCCcCHHHHHHhhc---cCceEEEEecCCCCCCCCC
Confidence 5433333333333332 223333334444444432 7999999999 5899999876554433333
Q ss_pred CCHHHHHHHHHHHHHh--CCEEEEehhhhch-hcccCccccccCCCcch--hhhhhhccCCc--cceeeeehHHHHHHhc
Q 017633 158 PKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGL--PVGAYGGRRDIMEMVA 230 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~--~~~li~De~~~~~-~~g~~~~~~~~~~~~di--~s~sK~~~~G~--~iG~v~~~~~~~~~~~ 230 (368)
.+-+.++++++++|+. ++++++|+-|..| -.. +...+..|+ .|+=|..|||+ .-||+++++++++...
T Consensus 172 l~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-----EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 172 LTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-----EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp --HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc-----CccccchhheeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 3444477788887775 7999999999877 221 223345565 47889999984 5567888999987654
No 377
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.77 E-value=2.3e-06 Score=75.24 Aligned_cols=306 Identities=13% Similarity=0.076 Sum_probs=158.5
Q ss_pred HHHHHHHHHhhCC-CC-CeEEEeCChHHHHHHHHHHHHHh--cC---------CceEEEEcCCCCCCchhhhhhcCCCcc
Q 017633 35 ENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARAF--TG---------RERIIKFEGCYHGHADPFLVKAGSGVA 101 (368)
Q Consensus 35 ~~~l~~~l~~~~~-~~-~~v~~~~~gt~a~~~al~~~~~~--~~---------~~~vi~~~~~~~~~~~~~~~~~~~~~~ 101 (368)
+.++-..+.++.+ +. .+-+|++||+-++.-++.+++.- ++ .+.|+....--|-+...+....|-+..
T Consensus 143 E~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd 222 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTD 222 (510)
T ss_pred hHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCc
Confidence 3455555556555 22 47889999999999999877621 11 244555555556665555555554321
Q ss_pred ccCCCCCCCCCCCCCCcccccCCC-----CHHHHHHHHHcCCCC---eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 017633 102 TLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 173 (368)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~ 173 (368)
. ++.++.+ ++++||+.|.+.+.+ +..+-+.......|..-| ++.|+++|++|
T Consensus 223 ~----------------c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~ 282 (510)
T KOG0629|consen 223 H----------------CIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKH 282 (510)
T ss_pred e----------------eEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhc
Confidence 0 1112211 699999999864333 333333333333576666 99999999999
Q ss_pred CCEEEEehhhhc-h-hcccCccccccCCC-cchhhhh--hhccCCccceeeeehH-HHHHHhcCCCC--------ccccc
Q 017633 174 GALLIFDEVMTG-F-RLAYGGAQEYFGVT-PDLTTLG--KIIGGGLPVGAYGGRR-DIMEMVAPAGP--------MYQAG 239 (368)
Q Consensus 174 ~~~li~De~~~~-~-~~g~~~~~~~~~~~-~di~s~s--K~~~~G~~iG~v~~~~-~~~~~~~~~~~--------~~~~~ 239 (368)
++++++|.+..| + -.... -..-.|+. .+-+|.+ |.++.++.++..+.++ .+.....+... .+..+
T Consensus 283 ~lWmHvDAAwGGglLmS~k~-R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLLMSRKH-RHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred CEEEEeecccccccccChhh-HhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 999999998854 2 11110 00112221 2333333 8888889999987765 44443332111 11111
Q ss_pred cCCCC----------HHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 240 TLSGN----------PLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 240 t~~~~----------~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
--+++ .+-.-..+.+- ..+ ...++..++++++..++++... .........-.+-+.++..+
T Consensus 362 ~DTgdK~iQCGRh~D~FKlWlmwkaK---G~~Gfe~~v~k~~~lA~yl~~~lrer~~---~~~l~~~~pe~~nv~fw~vp 435 (510)
T KOG0629|consen 362 YDTGDKAIQCGRHVDVFKLWLMWKAK---GTQGFEAQVDKCLRLAEYLYDRLREREG---FEMLFELEPEHVNVCFWYVP 435 (510)
T ss_pred cccccchhhcCccccHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHhccc---ceehhcCCCceEEEeeccCc
Confidence 00111 11111111111 122 2467788889999999887521 11111111112222222211
Q ss_pred CcccchhcccccH-----HHHHHHHHHHHcCe---eecCCCCC--cccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETT-----KFARFYRGMLEEGV---YFAPSQFE--AGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~-----~~~~~~~~l~~~Gi---~~~~~~~~--~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..-..+...++.. -+..+-..++++|- -..|.+.. .+|+ +.+.+.+|++-+++.|.++-+.
T Consensus 436 ~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 436 PSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred hHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 1111111111111 12244566777773 23343322 2232 4466889999999999887543
No 378
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.76 E-value=6.8e-08 Score=82.89 Aligned_cols=279 Identities=11% Similarity=0.030 Sum_probs=143.9
Q ss_pred hhHHHHHHHHHhhC---C----CCCeEEEeCChHHHHHHHHHHHHHh---c-CCceEEEEcCCCCCCchhhhhhcCCCcc
Q 017633 33 LLENVLAEMVISAV---P----SIEMVRFVNSGTEACMGVLRLARAF---T-GRERIIKFEGCYHGHADPFLVKAGSGVA 101 (368)
Q Consensus 33 ~~~~~l~~~l~~~~---~----~~~~v~~~~~gt~a~~~al~~~~~~---~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 101 (368)
-...+|.+.+.+++ + +...+++..|.|+-+++|+..+... . +.-+|+...|-| ..+......
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY-~~Y~~qt~~------ 115 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYY-SSYPEQTDF------ 115 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS---CHHHHHCCC------
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCc-cchHHHHHh------
Confidence 34667777777765 2 4578888888888888877443221 1 233455544433 321111110
Q ss_pred ccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeh
Q 017633 102 TLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De 181 (368)
++.. .+.+. +|..... -+.++...-=+++.|+|+-+.. . +. +++.-+..+|.|-
T Consensus 116 ------f~s~-------~y~w~-Gda~~~~--~~~~~~~~IElVTSPNNPDG~l-r------~~---V~~g~~~k~I~D~ 169 (363)
T PF04864_consen 116 ------FDSR-------LYKWA-GDASNFK--NSDNPSPYIELVTSPNNPDGQL-R------EA---VLNGSSGKVIHDL 169 (363)
T ss_dssp ------T-BT-------TEEEE-EECCCGT--T-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-
T ss_pred ------cccc-------Ccccc-ccHHhhc--cCCCCCCeEEEEeCCCCCcccc-c------ch---hcCCCCcceeeee
Confidence 0000 00000 0111111 0011234455667776654432 1 11 2355567789999
Q ss_pred hhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHH
Q 017633 182 VMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 258 (368)
Q Consensus 182 ~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~ 258 (368)
+|-.= ++.-.. ..+.+.=+.|+||.=| +|.|+||.++. +++.+.+. .+...+|.+++-=+|.-++..++.+
T Consensus 170 AYYWPhyTpI~~---~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~---~y~~lnTiGvS~dsQLRa~kiLk~v 243 (363)
T PF04864_consen 170 AYYWPHYTPITA---PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT---KYMELNTIGVSRDSQLRALKILKVV 243 (363)
T ss_dssp TT-STTTS---S----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH---HHHHHHCSS--HHHHHHHHHHHHHH
T ss_pred eeecccccccCC---CCCCceEEEEEecccCccccccceeeecCHHHHHHHH---HHHHHhcccCcHHHHHHHHHHHHHH
Confidence 98421 111111 1222222569999999 89999999775 56666665 4556688888866666666666554
Q ss_pred cc--------CCHHHHHHHHHHHHHHHHHHHHHhcCCce--------------EEeeccceEEEEeecCCCcccchhccc
Q 017633 259 KE--------PGTYEYLNKITGELTQGIIDAGKKAGHAI--------------CGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 259 ~~--------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.+ +++.+.-++..+...++|++++....... ...+...+.|+.+..
T Consensus 244 ~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~------------ 311 (363)
T PF04864_consen 244 LDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCER------------ 311 (363)
T ss_dssp HHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESS------------
T ss_pred HhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCC------------
Confidence 32 13555555566666666666654332110 112234566777642
Q ss_pred ccHHHHHHHHHHHHcCeeecCCC-----CCccccccCCCHHHHHHHHHHHHHH
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~-----~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
+. ..+-...|++.||.-+.|. ..++|+++..++++-+.++++|.+.
T Consensus 312 -ee-d~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 312 -EE-DEDCYAVLREAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp -CG-GSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred -cc-cccHHHHHHhCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 21 1455677788899988773 3356889999999999999999753
No 379
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.69 E-value=3.9e-05 Score=66.31 Aligned_cols=316 Identities=13% Similarity=0.046 Sum_probs=162.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh---cCCceEEEEcCCCCCCch-hhhhhcCCCccccCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF---TGRERIIKFEGCYHGHAD-PFLVKAGSGVATLGL 105 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~---~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~ 105 (368)
..+.....|++...+.++ .+.++-+.-|..|-+..+..+... -++ .+.+..+++|..+. +-....|......+.
T Consensus 76 agsrs~~~L~~avkdifG-fq~~iPthQGRgAE~Il~~i~ik~~~~~pg-~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~ 153 (471)
T COG3033 76 AGSRSYYALADAVKDIFG-FQYTIPTHQGRGAENILIPILIKKGEQEPG-SKMVAFSNYHFDTTRGHIQINGATPRNVYV 153 (471)
T ss_pred cccccHHHHHHHHHHhcC-ceeeeeccCCccHHHHHHHHHhhhccccCC-ccccccccceecchhHHHHhcCCccccccc
Confidence 345667889999999885 567788888877766665333321 123 34444445555433 333333332211111
Q ss_pred CCCCCCCCCCCCcccccCCC---CHHHHHHHHHc-CCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 106 PDSPGVPKGATYETLTAPFN---DVSALENLFEN-NKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~---d~~~le~~~~~-~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.- ....+..|+. |++.|+++|.+ +.+++..++ +.++|+.+|. .-+-+-++++.++|++|++.++.|
T Consensus 154 ~ea-------~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQ-pVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 154 DEA-------FDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQ-PVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred ccc-------ccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCC-cchHHhHHHHHHHHHHcCCcEEee
Confidence 110 0111123322 89999999997 445555443 3444444454 444445999999999999999999
Q ss_pred hhh----hch-hcccCccccccCC---Ccchhhhhhhcc-----CC-ccceee-eehHH----HHHHhcCCCCcccc-cc
Q 017633 181 EVM----TGF-RLAYGGAQEYFGV---TPDLTTLGKIIG-----GG-LPVGAY-GGRRD----IMEMVAPAGPMYQA-GT 240 (368)
Q Consensus 181 e~~----~~~-~~g~~~~~~~~~~---~~di~s~sK~~~-----~G-~~iG~v-~~~~~----~~~~~~~~~~~~~~-~t 240 (368)
.+- +.| ...+.. ...|.+ .-++.+..-++. -| ..+|.+ +.+++ +...++.....+.+ .|
T Consensus 226 a~RfaENaYFIk~rE~g-Yrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~t 304 (471)
T COG3033 226 AARFAENAYFIKQREPG-YRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPT 304 (471)
T ss_pred hhhhhhhhhhhhhcCcc-cccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccc
Confidence 765 112 111110 111211 011223322221 13 356655 44544 44444432221121 22
Q ss_pred CC-CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 241 LS-GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 241 ~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
++ .+--.+.+....|....+.+|+++...-.++|.+.|++ .+++..-+..|+-+.++...-.+. .|...
T Consensus 305 YGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~----~GVpi~~paGGHavfvda~~~lph------ip~eq 374 (471)
T COG3033 305 YGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEE----AGVPIVQPAGGHAVFVDAGKFLPH------IPAEQ 374 (471)
T ss_pred cCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHh----cCCeeEecCCCceEEeehhhhcCC------CChhh
Confidence 22 12223344444554444566777777778888877777 466655555566555554332110 01111
Q ss_pred -HHHHHHHHHH-HcCeeecCCCCCc-----------------cc---cccCCCHHHHHHHHHHHHHHHh
Q 017633 320 -KFARFYRGML-EEGVYFAPSQFEA-----------------GF---TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 320 -~~~~~~~~l~-~~Gi~~~~~~~~~-----------------~~---~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
-++.|+-.|- +.||....-|... ++ +...-|.++++..++.++++.+
T Consensus 375 Fpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 375 FPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred CcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 1355665554 5577665432111 12 2334477899999999988764
No 380
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.68 E-value=6e-06 Score=81.79 Aligned_cols=277 Identities=10% Similarity=0.117 Sum_probs=147.0
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC-CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCC
Q 017633 35 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 112 (368)
Q Consensus 35 ~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~-~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (368)
..++...++++.+ +.....+..++|.+.+.+++..+...+ +++|++ +.+-|..+...+....
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv-~~~~hP~~~~v~~t~a--------------- 174 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFV-AKDLHPQTKSVLHTRA--------------- 174 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEE-CCCCCcchHHHHHHHH---------------
Confidence 3466677778776 555666677788888866554332222 345555 4455554332222110
Q ss_pred CCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCc
Q 017633 113 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG 192 (368)
Q Consensus 113 ~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~ 192 (368)
...+.+++.+ |+++|++.+ +++++++ .+++..|.+.+ +++|.+++|++|.+++++--...+ +-..
T Consensus 175 ~~~g~~v~~~---~~~~l~~~~-----~~~~v~~-q~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al--~ll~ 239 (939)
T TIGR00461 175 KPFGIEVIVV---DCSDIKKAV-----DVFGCLL-QYPATDGSILD----YKQLIDALHSHKSLVSVAADLMAL--TLLT 239 (939)
T ss_pred HhcCcEEEEE---cHHHHhhcC-----CEEEEEE-ECCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHh--CCcC
Confidence 0112223333 455555444 3554444 44455787776 999999999999999996444221 1111
Q ss_pred cccccCCCcchh-hhhhhc----c-CCccceeeeehHHHHHHhcCC--C--------C-ccc--------------cccC
Q 017633 193 AQEYFGVTPDLT-TLGKII----G-GGLPVGAYGGRRDIMEMVAPA--G--------P-MYQ--------------AGTL 241 (368)
Q Consensus 193 ~~~~~~~~~di~-s~sK~~----~-~G~~iG~v~~~~~~~~~~~~~--~--------~-~~~--------------~~t~ 241 (368)
....+|. |++ ..+|.| + ||...|++.+++++.+.+..+ + + +.. .++.
T Consensus 240 ~Pge~Ga--Di~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNI 317 (939)
T TIGR00461 240 PPGHYGA--DIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNI 317 (939)
T ss_pred CHHHcCC--cEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcch
Confidence 1222333 553 233444 4 466688999999888776521 1 0 000 0111
Q ss_pred CCCHHHHHHHHHH-HHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 242 SGNPLAMTAGIHT-LKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 242 ~~~~~~~~a~~~~-l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
+.++...+..... +..+..+++ .++...+..++.+.|.+. ++..... ..|-.+.+.. .
T Consensus 318 Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~----G~~~~~~--~fF~~~~v~~------------~ 379 (939)
T TIGR00461 318 CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND----PHELINK--TWFDTLTVKV------------G 379 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCC--CccceEEEEe------------C
Confidence 1222222211111 244444443 344555666666666553 3221111 2222222221 1
Q ss_pred cHHHHHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHHH
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l~ 362 (368)
.....++.+.+.++||.++...... +++.-..+++|++.+++.+.
T Consensus 380 ~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 380 NGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 1125789999999999988754333 34566779999999999884
No 381
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.67 E-value=2e-06 Score=72.49 Aligned_cols=218 Identities=15% Similarity=0.092 Sum_probs=116.0
Q ss_pred EEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCCCHHHH
Q 017633 52 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFNDVSAL 130 (368)
Q Consensus 52 v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 130 (368)
.+-+-|||.|+..+......+-.+..|.+..++... ........|-. +....+-+... .. -|++.+
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~n-H~~if~~aGf~tv~~Y~yWd~~~---------k~---~d~e~~ 168 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWEN-HHAIFEKAGFTTVATYPYWDAEN---------KC---VDLEGF 168 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhH-HHHHHHHcCCceeeeeeeecCCC---------ce---ecHHHH
Confidence 455668999999998443333344456665655543 34444444422 21111111111 00 167777
Q ss_pred HHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCC------Ccc--
Q 017633 131 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV------TPD-- 202 (368)
Q Consensus 131 e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~------~~d-- 202 (368)
-..+...|+.-..++.-..++++| .-|+.|++..|++..++.+.+.+.|-+|.||..|.. ..+.|.+ ..+
T Consensus 169 Lsdl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~-~~DawAiR~fV~~g~e~f 246 (410)
T KOG1412|consen 169 LSDLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDL-DADAWAIRYFVEQGFELF 246 (410)
T ss_pred HHHHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCc-cccHHHHHHHHhcCCeEE
Confidence 777765543333444444444444 577788899999999999999999999999843332 2233321 111
Q ss_pred -hhhhhhhcc-CCccceee--ee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc----CCHH---HHHHHH
Q 017633 203 -LTTLGKIIG-GGLPVGAY--GG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTY---EYLNKI 270 (368)
Q Consensus 203 -i~s~sK~~~-~G~~iG~v--~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~----~~~~---~~~~~~ 270 (368)
..||+|.|| -+-|+|-+ ++ ++..+..+...-....-++++ .+.++.|..+-+.+.+ ++|. +.+..|
T Consensus 247 v~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S--NPPAyGArIV~kvL~tP~lre~W~~sik~MssR 324 (410)
T KOG1412|consen 247 VCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS--NPPAYGARIVHKVLSTPELREQWIQSIKTMSSR 324 (410)
T ss_pred EEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC--CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 248999999 57788865 33 344444333110111113332 1223333434455544 3332 334445
Q ss_pred HHHHHHHHHHHHHhcC
Q 017633 271 TGELTQGIIDAGKKAG 286 (368)
Q Consensus 271 ~~~l~~~l~~~~~~~~ 286 (368)
....|.+|.+.+..++
T Consensus 325 I~~MR~aLrd~L~aL~ 340 (410)
T KOG1412|consen 325 IKKMRTALRDHLVALK 340 (410)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5555555655555444
No 382
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=2.5e-05 Score=67.54 Aligned_cols=316 Identities=17% Similarity=0.179 Sum_probs=164.9
Q ss_pred cHHHHHHHHHHHHc-------CCCCCCCChhHHHH---H-HHHHhhCC-C---CCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 11 YLQVLAALGETMKK-------GTSFGAPCLLENVL---A-EMVISAVP-S---IEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 11 ~~~v~~a~~~~~~~-------~~~~~~~~~~~~~l---~-~~l~~~~~-~---~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
+..|.+++...+.+ +..|+..++...++ . ++-.+.|+ + ..--+-.-||+.|+-.+.... ..++
T Consensus 53 s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal--l~Ph 130 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL--LKPH 130 (477)
T ss_pred HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh--cCCC
Confidence 44577777777665 12233344433322 2 22223343 2 222334457999887776544 3578
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC----CHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN----DVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
++|.-.+-.-.|+........+.++-..+. .+..++ +.++.. |.|.||+..... +++++++-..
T Consensus 131 ~RiMGLDLP~GGHLsHGy~T~~kkISa~Si-yFeSmP-------Ykv~~~TG~IDYD~Le~~A~~f--rPk~iiaG~S-- 198 (477)
T KOG2467|consen 131 ERIMGLDLPSGGHLSHGYQTPTKKISATSI-YFESMP-------YKVDPSTGYIDYDKLEKTATLF--RPKLIIAGTS-- 198 (477)
T ss_pred CeeeeccCCCCCccccccccCCceeeeeee-ecccCc-------eeeCCCCCceehHHHHHHHHhc--CCcEEEeccc--
Confidence 889888776666655444444433211110 011111 111111 789999888754 6777777332
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hccc-CccccccCCCcchhhh--hhhccCCccceeeeehHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAY-GGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIM 226 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~-~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~~~~~~ 226 (368)
......+ ..+++++|++.|.+|++|=+| +|+ ..+. ...+++. |++|. -|++- |.|.|.++.++.+.
T Consensus 199 aY~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~----DiVTTTTHKsLR-GPRg~mIFyRkGvk 269 (477)
T KOG2467|consen 199 AYSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC----DIVTTTTHKSLR-GPRGAMIFYRKGVK 269 (477)
T ss_pred cchhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc----ceeecccccccc-CCcceeEEEeccCC
Confidence 2333444 899999999999999999999 666 3332 2233332 56544 47776 44777776665332
Q ss_pred HHhcCCC----------------CccccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 227 EMVAPAG----------------PMYQAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 227 ~~~~~~~----------------~~~~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
..-...+ +..++ ++....+++...+|+...+.+ +.+.+.++++.+.++|.+. +.
T Consensus 270 ~~~~k~g~~i~ydlE~kINfaVFP~lQG---GPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~----Gy 342 (477)
T KOG2467|consen 270 SIKPKQGKEILYDLEDKINFAVFPGLQG---GPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR----GY 342 (477)
T ss_pred cCCCCCCCcceechhhhhhhhccccccC---CCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc----Cc
Confidence 1110000 11122 223344555555677665544 4566777777777777664 33
Q ss_pred ceEEeec-cceEEEEeecCCCcccchhcccccHHHHHH---HHHHHHcCe------eecCCCCCcccc---ccCCCHHHH
Q 017633 288 AICGGYI-SGMFGFFFTEGPVYNFEDAKKSETTKFARF---YRGMLEEGV------YFAPSQFEAGFT---SLAHSSDDI 354 (368)
Q Consensus 288 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~Gi------~~~~~~~~~~~~---~~~~~~~~i 354 (368)
.....+. .+++.+++++... ++...+.+ +....++.- .+.|+|-....+ +-...++|.
T Consensus 343 ~lvtgGTDnHlvLvDLr~~G~---------dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df 413 (477)
T KOG2467|consen 343 KLVTGGTDNHLVLVDLRPKGV---------DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDF 413 (477)
T ss_pred eEecCCccceEEEEeccccCC---------chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHH
Confidence 2222222 3466777764322 22222322 233333322 223333221222 334577888
Q ss_pred HHHHHHHHHHH
Q 017633 355 QHTITAAEKVL 365 (368)
Q Consensus 355 ~~~~~~l~~~l 365 (368)
++..+-|.+++
T Consensus 414 ~~v~~fi~~av 424 (477)
T KOG2467|consen 414 EKVADFIDRAV 424 (477)
T ss_pred HHHHHHHHHHH
Confidence 88888777664
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.65 E-value=4.2e-06 Score=73.99 Aligned_cols=289 Identities=11% Similarity=0.044 Sum_probs=143.7
Q ss_pred CCCeEEEeCChHHHHHHH-HHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccC-CCCCCCCCCCCCCcccccCCC
Q 017633 48 SIEMVRFVNSGTEACMGV-LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLTAPFN 125 (368)
Q Consensus 48 ~~~~v~~~~~gt~a~~~a-l~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 125 (368)
+....++.+-+|---... +...+ ..+..+.++.+.--|.+...++...|-.....+ .... +....
T Consensus 73 ~~~~~~~vP~atgm~l~l~l~~l~-~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~---------d~l~t--- 139 (389)
T PF05889_consen 73 SVKSCFVVPMATGMSLTLCLLALR-MRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEG---------DELIT--- 139 (389)
T ss_dssp THCEEEEESS-HHHHHHHHHHHHH-HHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEET---------TEEEE---
T ss_pred cccceEEEecccccHHHHHHHHHh-cccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCC---------Ceeec---
Confidence 356677887555332222 23333 334445555566667766666666655432211 1100 11111
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch--hc-ccCccccccCCC-c
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RL-AYGGAQEYFGVT-P 201 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~--~~-g~~~~~~~~~~~-~ 201 (368)
|.+++|+.+++..+...+.++.......+...+. +++|+++|++||++.++..||.== .. ...-.....|.. .
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltttscfapr~~D~---i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda 216 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTTSCFAPRLPDD---IEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDA 216 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSE
T ss_pred cHHHHHHHHHHhCCCCeEEEEEecCccCCCCCcc---HHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcce
Confidence 6889999998633444555555555555554442 899999999999999999999410 00 000000112443 3
Q ss_pred chhhhhhhccCCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHH
Q 017633 202 DLTTLGKIIGGGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQG 277 (368)
Q Consensus 202 di~s~sK~~~~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~ 277 (368)
++-+..|-|--|.+-+.+.+ ++..+..+...-+..-+.+ + ..- ....+..+.. ..++....+...++.++
T Consensus 217 ~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~s---p--~ld-~~itLl~LG~~g~~~ll~~r~~~f~~l~er 290 (389)
T PF05889_consen 217 FVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASAS---P--SLD-LFITLLSLGCTGYGALLKERKASFPYLKER 290 (389)
T ss_dssp EEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTSH---H--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhcc---c--chH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 44578899873332333333 4556665542111111111 1 111 1222222222 33567788888888899
Q ss_pred HHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeee----cCCCC-----------C
Q 017633 278 IIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF----APSQF-----------E 341 (368)
Q Consensus 278 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~----~~~~~-----------~ 341 (368)
|++...+.+... ..+.....+.+.+..-. . ....+.-.|...|..+||.- .+.+. +
T Consensus 291 l~~~aee~~e~ll~~p~N~is~a~tl~~l~--~------~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~ 362 (389)
T PF05889_consen 291 LKKWAEEVGERLLETPRNHISMAFTLDTLY--E------ISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCP 362 (389)
T ss_dssp HHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T------CCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSS
T ss_pred HHHHHHHhhhhhcCCCCCCeeEEEECccch--h------hccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchH
Confidence 988877665221 11111223344442110 0 01134567888898885432 22211 1
Q ss_pred cccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 342 AGFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 342 ~~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
++.+ .+.+++||++.++++|+++++
T Consensus 363 Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 363 YLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 1111 467799999999999999874
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.56 E-value=2.4e-06 Score=77.35 Aligned_cols=278 Identities=17% Similarity=0.207 Sum_probs=125.0
Q ss_pred hHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCC
Q 017633 34 LENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 112 (368)
Q Consensus 34 ~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (368)
...++...++++.+ +-...-+-.+++.+-+.++...+...++.+.++.+.+-|+.+...+.....
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~-------------- 176 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAA-------------- 176 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCC--------------
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhh--------------
Confidence 34577777888776 433345556777777766655544433334555566677765544333211
Q ss_pred CCCCCcccccCCCC--HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc
Q 017633 113 KGATYETLTAPFND--VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 189 (368)
Q Consensus 113 ~~~~~~~~~~~~~d--~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g 189 (368)
..+.+++.++.++ ..+ .++++++++..+ +..|.+-+ +++|.+++|++|.++++ -+- . ..+
T Consensus 177 -~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~P-n~~G~~ed----~~~i~~~~h~~gal~~~-~ad--~~aL~ 239 (429)
T PF02347_consen 177 -PLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNP-NTFGVFED----IKEIADIAHAAGALVIV-GAD--PNALG 239 (429)
T ss_dssp -HCCEEEEEE-BBTTCSB---------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGG--CCGCC
T ss_pred -hCCeEEEEecccccCCcc--------ccCeEEEEeecC-CCCceEee----HHHHHHHHHHcCCEEEE-ecC--HHHHh
Confidence 1122333333221 111 257777777544 44677777 99999999999999887 332 1 122
Q ss_pred cCccccccCCCcchh-----hhhhhcc-CCccceeeeehHHHHHHhcCC---------CC-c---------------ccc
Q 017633 190 YGGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA---------GP-M---------------YQA 238 (368)
Q Consensus 190 ~~~~~~~~~~~~di~-----s~sK~~~-~G~~iG~v~~~~~~~~~~~~~---------~~-~---------------~~~ 238 (368)
..-....+|. |++ +|+=.++ ||-..|++.+++++++.+..+ +. . .-.
T Consensus 240 ~l~~Pge~GA--DI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 240 GLKSPGEYGA--DIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp TC--GGGGT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred CcCChhhcCc--cEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 2222223444 543 3444444 567899999999888776521 10 0 001
Q ss_pred ccCCCCHHHHHH-HHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 239 GTLSGNPLAMTA-GIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 239 ~t~~~~~~~~~a-~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
+..+.++..++. +..-+..+..++ ..+....++.+++++|.+. ....+ ... .+.-+....
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~----~~~-~f~e~v~~~---------- 381 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPF----DNP-FFFEFVVVF---------- 381 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECS----SSS-SBSSEEEEE----------
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCccc----CCC-Cceeeeeec----------
Confidence 333444443332 222334444444 3456777777777777664 11111 111 111111111
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCc--cccccCCCHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEA--GFTSLAHSSDDIQHTITAA 361 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~--~~~~~~~~~~~i~~~~~~l 361 (368)
.......++.+.+...|+......... +++.-..+++||+++++.+
T Consensus 382 -~~~~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 382 -SKDKEVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -SS-HHHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred -CCcHHHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 011233345566666675554333222 2344556889999998764
No 385
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.34 E-value=1.3e-05 Score=68.68 Aligned_cols=174 Identities=18% Similarity=0.161 Sum_probs=100.8
Q ss_pred CCCChhHHHHHHHHHhhC-CC------CC--eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCC
Q 017633 29 GAPCLLENVLAEMVISAV-PS------IE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG 99 (368)
Q Consensus 29 ~~~~~~~~~l~~~l~~~~-~~------~~--~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 99 (368)
+.|.....++.+.-+++. ++ .+ ...-+-|||-|+..+-.....+-+...|.+.+|+...+ --.....|..
T Consensus 91 YlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh-~~if~~ag~~ 169 (427)
T KOG1411|consen 91 YLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNH-KNIFKDAGLP 169 (427)
T ss_pred hccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCccccc-CccccccCcc
Confidence 445556667777766654 21 12 23446689999998885555555566676666655433 2222222222
Q ss_pred c-cccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE
Q 017633 100 V-ATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 177 (368)
Q Consensus 100 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~l 177 (368)
+ .+.++ +...+. |.+.+-+-+.+.++.- .+++-.-..|++.+-|+.|.+++|.++.++.+.+-
T Consensus 170 ~~~yrYyd~~t~gl--------------d~~g~ledl~~~p~gs-~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~p 234 (427)
T KOG1411|consen 170 VKFYRYYDPKTRGL--------------DFKGMLEDLGEAPEGS-IILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLP 234 (427)
T ss_pred eeeeeecccccccc--------------chHHHHHHHhcCCCCc-EEEeehhhcCCCCCCccHHHHHHHHHHhhhccccc
Confidence 2 11111 222222 6666555565543332 33333333444557888899999999999999999
Q ss_pred EEehhhhchhcccCccccccC------CCcch---hhhhhhcc-CCccceee
Q 017633 178 IFDEVMTGFRLAYGGAQEYFG------VTPDL---TTLGKIIG-GGLPVGAY 219 (368)
Q Consensus 178 i~De~~~~~~~g~~~~~~~~~------~~~di---~s~sK~~~-~G~~iG~v 219 (368)
+.|-+|.||-.|.. ..+.+. ..-++ .||+|.+| =|-|+|.+
T Consensus 235 ffDmAYQGfaSG~~-d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 235 FFDMAYQGFASGDL-DKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred hhhhhhcccccCCc-hhhHHHHHHHHHcCCceEeehhhhhhcchhhhcccee
Confidence 99999998833321 111111 11122 37899998 46788876
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.14 E-value=0.0019 Score=56.45 Aligned_cols=323 Identities=15% Similarity=0.052 Sum_probs=160.2
Q ss_pred CCceeccCCCc----HHHHHHHHHHHHcCCCCCC-----------CChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHH
Q 017633 1 MPQLIILFPSY----LQVLAALGETMKKGTSFGA-----------PCLLENVLAEMVISAVP--SIEMVRFVNSGTEACM 63 (368)
Q Consensus 1 ~~~~~~~g~~~----~~v~~a~~~~~~~~~~~~~-----------~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~ 63 (368)
|+..-+|+.+| |+|++.+.+.+.+....|. ......+.++.++++++ +...|+|+.+|..+--
T Consensus 3 ~~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 3 MPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence 34556676654 5666666655554222111 12455677777888875 5678888877765554
Q ss_pred HHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE
Q 017633 64 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 143 (368)
Q Consensus 64 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~ 143 (368)
.++.+.. ..++..--+..+++..........-+..... . .......+.-.+| +++..+ +. ++.+.
T Consensus 83 ~~~p~nL-l~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~------~-~~~~~~~~~~~iP--~~~~~~--~~---~~~ay 147 (365)
T COG1932 83 AMAPMNL-LGKRGTDYVDTGAWSEFAIKEAKKVGKQPKL------I-DARIEEAGYGSIP--DLSKWD--FS---DNDAY 147 (365)
T ss_pred HHHHHhh-hcccCceeEeeeehhHhHHHHHHHhcccccc------c-ccceeccCccCCC--Chhhcc--cC---CCccE
Confidence 4442221 1122110333333322211211111111000 0 0000011111122 333322 22 23445
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhh--hhhcc-CCccceeee
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKIIG-GGLPVGAYG 220 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~--sK~~~-~G~~iG~v~ 220 (368)
++..++....|...++.. .+.. +.++++|-.-.-+ +....+..+ |++.+ .|.+| .| ++.++
T Consensus 148 v~~~~NeTi~Gv~v~~~p------~~~~--~~~~v~D~SS~il--sr~iDvsk~----dviyagaQKnlGpaG--ltvvI 211 (365)
T COG1932 148 VHFCWNETISGVEVPELP------DIGS--DGLLVADASSAIL--SRPIDVSKY----DVIYAGAQKNLGPAG--LTVVI 211 (365)
T ss_pred EEEecCCcccceEccCCC------CCCC--CceEEEecccHHh--cCCCChhHc----ceEEEehhhccCccc--eEEEE
Confidence 777777666777666422 1111 1788999544311 111111111 44444 49998 46 88889
Q ss_pred ehHHHHHHhcCC-CC--------ccccccCC-CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 221 GRRDIMEMVAPA-GP--------MYQAGTLS-GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 221 ~~~~~~~~~~~~-~~--------~~~~~t~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
.++++.+..... .+ ...++++. ++.++.+.+..+++.+...+=++.+.++-+.-.+.|.+...+.++...
T Consensus 212 vr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~ 291 (365)
T COG1932 212 VRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRN 291 (365)
T ss_pred EcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 999988877643 11 12234444 345566667777787766443344444444444555554443332211
Q ss_pred ---Eeecc-ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC--ccc--cccCCCHHHHHHHHHHHH
Q 017633 291 ---GGYIS-GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--AGF--TSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 291 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--~~~--~~~~~~~~~i~~~~~~l~ 362 (368)
..... .-+.|.+. +......|...+.++|+..--|..- ..| +--.++.++++.+++-++
T Consensus 292 ~v~~~~RS~mnV~f~~~-------------~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~ 358 (365)
T COG1932 292 LVAKANRSRMNVTFTLV-------------DAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMD 358 (365)
T ss_pred ccchhhccceeEEEEcC-------------cHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHH
Confidence 11111 12233331 3344577888888888777655211 133 334669999999999998
Q ss_pred HHHhh
Q 017633 363 KVLRQ 367 (368)
Q Consensus 363 ~~l~~ 367 (368)
.+.++
T Consensus 359 ~f~~~ 363 (365)
T COG1932 359 WFEET 363 (365)
T ss_pred HHHHh
Confidence 87654
No 387
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.13 E-value=0.00024 Score=63.65 Aligned_cols=320 Identities=15% Similarity=0.111 Sum_probs=165.0
Q ss_pred cHHHHHHHHHHHHcC-----CCCCCCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHHhc----C-CceE
Q 017633 11 YLQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFT----G-RERI 78 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~~~----~-~~~v 78 (368)
+++..+-+.+.+.+. ..|+...+...+....++..+.+ ..--..|.|||++...+.+.-+... + ...-
T Consensus 93 ~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~ 172 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPN 172 (491)
T ss_pred CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCcc
Confidence 444444444444441 22444566777888888888863 2344567788899666664433221 1 1112
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++...+.|.....+...-+..+...++...+... |+..+.+.++ +++..++.+-.+-+.|..-+
T Consensus 173 iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~-------------D~~k~~~~i~---eNti~lv~~~~~~p~G~~e~ 236 (491)
T KOG1383|consen 173 IVTPQNVHAAFEKAARYFEVELREVPLDEGDYRV-------------DPGKVVRMID---ENTIMLVGSLPNFPTGEIED 236 (491)
T ss_pred ccchHHHHHHHHHHHhhEEEEEEeeeccccceEe-------------cHHHHHHHhc---cceEEEEEEcCCCCccchhh
Confidence 2223233322222222112222222221111111 7888888887 47888888777777777777
Q ss_pred CHHHHHHHHHHHHH-hCCEEEEehhhhch-hcccCccccccCCC-cchhhhh---hhcc-CCccceeeee-hHHHH-HHh
Q 017633 159 KPDFLNAIRRITKE-NGALLIFDEVMTGF-RLAYGGAQEYFGVT-PDLTTLG---KIIG-GGLPVGAYGG-RRDIM-EMV 229 (368)
Q Consensus 159 ~~~~l~~i~~l~~~-~~~~li~De~~~~~-~~g~~~~~~~~~~~-~di~s~s---K~~~-~G~~iG~v~~-~~~~~-~~~ 229 (368)
+++|.++..+ +++++.+|..-.|| -.........|+.. |-+.+.| --+| ..-.+||++- ++++. +.+
T Consensus 237 ----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~ 312 (491)
T KOG1383|consen 237 ----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQL 312 (491)
T ss_pred ----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceE
Confidence 9999999999 99999999888877 32111222344442 3333332 1122 2224677743 44432 222
Q ss_pred c----CCCCccccccCCCCHH--HHHHHHHHHHHHccCCHH---HHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 230 A----PAGPMYQAGTLSGNPL--AMTAGIHTLKRLKEPGTY---EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 230 ~----~~~~~~~~~t~~~~~~--~~~a~~~~l~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
. ..+..+-+.|...|-. ..++..+++-.+..++++ +++.++...+++.+++. +....+. .+.+.+
T Consensus 313 ~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i----~~i~i~g--kp~vs~ 386 (491)
T KOG1383|consen 313 FFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENI----KGIKIVG--KPLVSF 386 (491)
T ss_pred EEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcc----ccceecC--CCcEEE
Confidence 1 1122222333333322 223333444444445543 45666666666666663 2111111 144455
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC---ccccc-cCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE---AGFTS-LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~---~~~~~-~~~~~~~i~~~~~~l~~~l~~ 367 (368)
....+. .-+.-++.+.|.++|-.+-.-..| ++++. ....++-.++++.-|++++.+
T Consensus 387 ~~~~s~-----------~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 387 ILFGSN-----------DVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred EEccCC-----------ccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 444322 122467889999998777554333 23332 233444468888888888765
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.00019 Score=60.59 Aligned_cols=183 Identities=20% Similarity=0.266 Sum_probs=113.8
Q ss_pred CCCCCCChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccc
Q 017633 26 TSFGAPCLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 102 (368)
Q Consensus 26 ~~~~~~~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 102 (368)
+.||+-+..++.|.+-+++.++ . .-+..+. |||-|+-+++.-. .+++|..+...++=+-...-.+.+.+.+
T Consensus 58 tGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~--LRpgDell~i~G~PYDTLeevIG~rg~~--- 131 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGI--LRPGDELLYITGSPYDTLEEVIGLRGEG--- 131 (416)
T ss_pred CCCCccccchhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhc--cCCCCeEEEecCCcchhHHHHhccCCCC---
Confidence 4577777788899999999997 2 3455566 6999999988544 3567777776554333222222222221
Q ss_pred cCCCCCCCCCCCCCCcccccCCC-----CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC--CHHHHHHHHHHHHHh--
Q 017633 103 LGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIAP--KPDFLNAIRRITKEN-- 173 (368)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~l~~i~~l~~~~-- 173 (368)
.+-....+.....+|.. |.+.++..++ ++++++.+.-..+-. +-| +-+.++++..+.++-
T Consensus 132 ------~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~---~~tkli~IQRS~GY~--~RpS~~I~eI~~~i~~vk~inp 200 (416)
T COG4100 132 ------QGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS---DRTKLIGIQRSKGYA--WRPSLSIAEIEEMITFVKEINP 200 (416)
T ss_pred ------cccHHHhCcceeecccccCCcccHHHHHHhcC---ccceEEEEEeccCcC--CCCcccHHHHHHHHHHHHhcCC
Confidence 11111222223333322 7889998888 688888886554321 122 122277777777774
Q ss_pred CCEEEEehhhhch-hcccCccccccCCCcchh--hhhhhccCCc--cceeeeehHHHHHHhc
Q 017633 174 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGL--PVGAYGGRRDIMEMVA 230 (368)
Q Consensus 174 ~~~li~De~~~~~-~~g~~~~~~~~~~~~di~--s~sK~~~~G~--~iG~v~~~~~~~~~~~ 230 (368)
++++++|..|..| -. .+...+..|+. |+=|..|||+ .-||+.+.+++++...
T Consensus 201 n~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 201 NVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred CEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 7999999999877 21 12234456765 6779999884 5567788888887654
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.10 E-value=0.001 Score=59.73 Aligned_cols=281 Identities=13% Similarity=0.088 Sum_probs=140.2
Q ss_pred EEeCChHHHHHHHHHHHHHh-----cCC-----------ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCC
Q 017633 53 RFVNSGTEACMGVLRLARAF-----TGR-----------ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGAT 116 (368)
Q Consensus 53 ~~~~~gt~a~~~al~~~~~~-----~~~-----------~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (368)
++..++++++..++..++.- ..+ +-|.-...-.|-+.-.+...++.+........+.++
T Consensus 143 viQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~m----- 217 (511)
T KOG0628|consen 143 VIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGM----- 217 (511)
T ss_pred eEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCC-----
Confidence 33446999999998766522 111 223334445555555555555554332222222222
Q ss_pred CcccccCCCCHHHHHHHHHcCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccc
Q 017633 117 YETLTAPFNDVSALENLFENNK--GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQ 194 (368)
Q Consensus 117 ~~~~~~~~~d~~~le~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~ 194 (368)
+.+.|+++|.+.. .-+..+++-+..+++.+..++ +.+|..+|+++|++|++|.+|+|- .+.+
T Consensus 218 ---------r~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~---l~elg~Vc~~~glWLHVDAAYAGs----a~iC 281 (511)
T KOG0628|consen 218 ---------RGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDE---LEELGPVCREEGLWLHVDAAYAGS----AFIC 281 (511)
T ss_pred ---------CHHHHHHHHHHHHhCCCccEEEEEeecCcccccccc---HHHhcchhhhcCEEEEeehhhccc----cccC
Confidence 5778888877521 134455554544444333332 999999999999999999999753 1122
Q ss_pred ccc-----CC-Ccc-h-hhhhhhccCCccceeeeehHH--HHHH-------hcCC--CCccccccCCCC---HHHHHHHH
Q 017633 195 EYF-----GV-TPD-L-TTLGKIIGGGLPVGAYGGRRD--IMEM-------VAPA--GPMYQAGTLSGN---PLAMTAGI 252 (368)
Q Consensus 195 ~~~-----~~-~~d-i-~s~sK~~~~G~~iG~v~~~~~--~~~~-------~~~~--~~~~~~~t~~~~---~~~~~a~~ 252 (368)
..+ |+ ..| + ...+|++..-+-++.+...+. +.+. +.+. ......-.|..+ .+-..-..
T Consensus 282 pE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlW 361 (511)
T KOG0628|consen 282 PEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLW 361 (511)
T ss_pred HHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHH
Confidence 211 11 011 1 124676653333333322211 1111 1110 000000111111 11111122
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 253 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
-.++.+.-+++ +.+.+..-.+.+.+.++..+-+ +.......-.++.|.+.. ....-+++.+++...
T Consensus 362 fv~R~~Gve~l-q~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~------------~N~~ne~Ll~~in~~ 428 (511)
T KOG0628|consen 362 FVLRSYGVENL-QNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKG------------DNEINEALLNRLNSS 428 (511)
T ss_pred HHHHHHhHHHH-HHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecC------------CcHHHHHHHHHHHhc
Confidence 23343433444 3445555566677777654433 333333333344554432 334457788888766
Q ss_pred -CeeecCCC---CCcccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 332 -GVYFAPSQ---FEAGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 332 -Gi~~~~~~---~~~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.|.+.+.. ...+++ +..++++|+++..+.|.+...+
T Consensus 429 g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 429 GRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred CcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 47777753 222232 3456889999999988877643
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.06 E-value=0.0014 Score=55.78 Aligned_cols=329 Identities=15% Similarity=0.078 Sum_probs=180.5
Q ss_pred eccCCCcHHHHHHHHHHHHcC------CCC-CC-C-ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 5 IILFPSYLQVLAALGETMKKG------TSF-GA-P-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~------~~~-~~-~-~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
|.+|.-+...++.+.+.+++- .++ |- | ...-+-+...++.+.+ ..+.|-+.+|-|--+...+..+...+.
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTe 153 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTE 153 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcc
Confidence 677888888888888877761 111 11 1 0111233444555555 456777777555544444444433322
Q ss_pred -CceEEEEcCCCCCCchhh---hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 75 -RERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 75 -~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
+-+|+.-..+|.....+. +.+.|..+ ...+.....+ ..-.....+++-+.|..+.+..+.+++..++
T Consensus 154 kR~KILlE~kaFPSDhYAiesQ~~lhG~~~-------e~sm~~iePR--EGEetlRteDILd~IEkngDeiA~v~fSGvq 224 (465)
T KOG3846|consen 154 KRFKILLEKKAFPSDHYAIESQCKLHGISP-------ENSMIQIEPR--EGEETLRTEDILDTIEKNGDEIALVCFSGVQ 224 (465)
T ss_pred hhhhhhhccCCCCchHHHHHhhhhhcCCCh-------HHheEEeccc--ccccchhHHHHHHHHHhcCCeEEEEEeecce
Confidence 445666566665543332 22333321 1111100000 0000113677777777777889999999998
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhh--hhhhccCCc-cceeeeehHHHH
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTT--LGKIIGGGL-PVGAYGGRRDIM 226 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s--~sK~~~~G~-~iG~v~~~~~~~ 226 (368)
--+|...+ +.+|-..-+..|.++=.|-+|+ .|. ..-...|++ |+.+ .=|.+++|. .||..++.++-.
T Consensus 225 yYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA---vgNVpL~LHdWgV--DFACWCSYKYlnaGaGgIgGlFvHekh~ 295 (465)
T KOG3846|consen 225 YYTGQYFD----IGAITFAGQFKGCLVGFDLAHA---VGNVPLQLHDWGV--DFACWCSYKYLNAGAGGIGGLFVHEKHT 295 (465)
T ss_pred eecccccc----hhhhhhcccCCCcEechhhhhh---hcCCceEEeecCC--ceEEEeeecccccCCCccceeeeehhhh
Confidence 88898888 8888876677799999999996 332 122334555 5433 337777442 566655543221
Q ss_pred -H---HhcC-C-----CCcc-----------ccccC-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh
Q 017633 227 -E---MVAP-A-----GPMY-----------QAGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 284 (368)
Q Consensus 227 -~---~~~~-~-----~~~~-----------~~~t~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 284 (368)
+ ++.. . .++. .+... .++.+...+.+..++....-. .+.++++.-.+...|+.+...
T Consensus 296 ~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~ 374 (465)
T KOG3846|consen 296 KESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKA 374 (465)
T ss_pred cchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHHHH
Confidence 1 1110 0 0011 11111 234455566667777664322 455555555555555444322
Q ss_pred c-CC---------------ceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc---
Q 017633 285 A-GH---------------AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--- 345 (368)
Q Consensus 285 ~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--- 345 (368)
. +. +......|..+.+.+..+ ...++..|.++|+.+-....+.+|.
T Consensus 375 ~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp---------------~~~vfqeL~krGv~~DkR~PNvIRvAPv 439 (465)
T KOG3846|consen 375 SKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP---------------TPKVFQELHKRGVIGDKRRPNVIRVAPV 439 (465)
T ss_pred hcccCchhhhcceeEEEeCCcccccccceEEEEeCCC---------------chHHHHHHHHcCeeccccCCCceEeecc
Confidence 1 11 112222333334443321 1577899999999998776666653
Q ss_pred ccCCCHHHHHHHHHHHHHHHhh
Q 017633 346 SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 346 ~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.+-.|+-.+++.|.+++..
T Consensus 440 pLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 440 PLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred hhhccHHHHHHHHHHHHHHHHH
Confidence 7889999999999999988754
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.91 E-value=0.0018 Score=64.51 Aligned_cols=274 Identities=12% Similarity=0.068 Sum_probs=140.5
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcC-CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCC
Q 017633 36 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 113 (368)
Q Consensus 36 ~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~-~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (368)
.++...++++.+ +-...-+-.+||.+-+.+++.. ...+ +.+.++++.+-|..+...+..... ..
T Consensus 127 ~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~-~~~~~k~~~~~v~~~~hP~~~~v~~t~~~---------~~---- 192 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK-RVAKSKSNRFFVDEHCHPQTLSVLRTRAE---------GF---- 192 (954)
T ss_pred HHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHH-HHhhcCCCEEEECCCCCHHHHHHHHHhhh---------cC----
Confidence 355566667665 4334344446666666444433 3332 234455566666554333332111 11
Q ss_pred CCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCcc
Q 017633 114 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGA 193 (368)
Q Consensus 114 ~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~ 193 (368)
+.+++ .+++++.+. +++.++++. +++..|.+.+ +++|.+++|++|.++|+- +. .+..+-.-.
T Consensus 193 --g~~i~------~~~~~~~~~---~~~~~v~vq-~P~~~G~i~d----~~~i~~~~h~~gal~~~~-~d-~laL~ll~~ 254 (954)
T PRK12566 193 --GFELV------VDAVDNLAA---HAVFGALLQ-YPDTHGEIRD----LRPLIDQLHGQQALACVA-AD-LLSLLVLTP 254 (954)
T ss_pred --CcEEE------EcchhhcCC---CCEEEEEEE-CCCCceEEcc----HHHHHHHHHHcCCEEEEE-eC-HHHHhCCCC
Confidence 11111 233444443 357776663 3344677766 999999999999986632 21 001111111
Q ss_pred ccccCCCcchh-----hhhhhcc-CCccceeeeehHHHHHHhcCC--CC-----------------------ccccccCC
Q 017633 194 QEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA--GP-----------------------MYQAGTLS 242 (368)
Q Consensus 194 ~~~~~~~~di~-----s~sK~~~-~G~~iG~v~~~~~~~~~~~~~--~~-----------------------~~~~~t~~ 242 (368)
...+|. ||+ +|+=.++ ||--.|++.+++++.+.+..+ +. -.-.++.+
T Consensus 255 Pge~GA--DI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC 332 (954)
T PRK12566 255 PGELGA--DVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC 332 (954)
T ss_pred hhhcCC--cEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh
Confidence 223333 553 3555556 677799999999888877521 00 00112233
Q ss_pred CCHHHHHHHHHHH-HHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccccc
Q 017633 243 GNPLAMTAGIHTL-KRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 243 ~~~~~~~a~~~~l-~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
.++..++.+.+.+ ..+..+++ .+++..+..++.+.|.+. ++... ...+|-.+.+.. .
T Consensus 333 T~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~----g~~~~--~~~fF~~~~v~~-------------~ 393 (954)
T PRK12566 333 TAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK----GIKRL--NRHFFDTLTLEV-------------G 393 (954)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc----CCccc--cCCccceEEEEc-------------c
Confidence 3433333333333 22233444 344556666777777663 22111 112222333221 1
Q ss_pred HHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHH
Q 017633 319 TKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAE 362 (368)
Q Consensus 319 ~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~ 362 (368)
....++.+...++||-++......+. +--.++++|++.++..+.
T Consensus 394 ~~~~~~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 394 GAQAAIIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CCHHHHHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 02467788888899888876544443 344668899998888773
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.85 E-value=0.009 Score=46.73 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=40.7
Q ss_pred ChhHHHHHHHHHhhCC-----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 32 CLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
.++.+++++++.+.++ ++++|++|+|++++++.++.++. .++|.|++..+.|++
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~--dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA--DPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc--CCCCEEEEeCCCCCC
Confidence 3555566666655533 46899999999999999987763 478899999988864
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.33 E-value=0.26 Score=41.42 Aligned_cols=54 Identities=26% Similarity=0.306 Sum_probs=36.9
Q ss_pred CHHHHHHHHHcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 126 DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 126 d~~~le~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
|++.+++.+.+- ++-.-.+..... -...-.++-+++|+.+|..|+++-|+..+|
T Consensus 142 dleav~~~iee~g~dcilci~stts----cfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTS----CFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeeccc----ccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 789999999873 222333322221 112233444999999999999999999999
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.00 E-value=0.87 Score=43.47 Aligned_cols=269 Identities=11% Similarity=0.160 Sum_probs=129.5
Q ss_pred HHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCccc
Q 017633 42 VISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETL 120 (368)
Q Consensus 42 l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (368)
++++.+ +....-+..-||.|-+....+.+. .++.+ ++.+...|..+...+.....++ +.+
T Consensus 172 i~dlTGL~~aNASLLDEgTAaaEAm~l~~~~-~krkk-~vvd~~~hpqtlsV~~TRa~~~---------------~i~-- 232 (1001)
T KOG2040|consen 172 ITDLTGLPMANASLLDEGTAAAEAMALCNRI-NKRKK-FVVDSNCHPQTLSVVKTRAKGF---------------GIK-- 232 (1001)
T ss_pred hhhccCCcccchhhhccchhHHHHHHHHHhh-cccce-EEecCCCCcchhhhhhcccccc---------------cee--
Confidence 334444 344444555688777766655543 34445 6667777776544333322211 111
Q ss_pred ccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCC
Q 017633 121 TAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVT 200 (368)
Q Consensus 121 ~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~ 200 (368)
+...|+.+..... +....+++ ..+.+.|.+.+ ..++++.+++.|.++++---...+ .-.-....+|.+
T Consensus 233 -v~~~~~~~~~~s~----~~v~gvlv-QYP~t~G~i~d----~~el~~~a~~~~s~vv~atDLLaL--tiLrpPgefGaD 300 (1001)
T KOG2040|consen 233 -VVVSDIKEADYSS----KDVSGVLV-QYPDTEGSVLD----FDELVELAHANGSLVVMATDLLAL--TILRPPGEFGAD 300 (1001)
T ss_pred -EEecCHHHhhccc----cceeEEEE-EcCCCCCcccC----HHHHHHHhhccCceEEEeehhhHH--HccCChhhcCce
Confidence 1111333332222 24556655 34445688888 999999999999887753111111 011112233433
Q ss_pred cchhh---hhhhcc-CCccceeeeehHHHHHHhcCC--CCc---------------------cccccCCCCHHHHHHHHH
Q 017633 201 PDLTT---LGKIIG-GGLPVGAYGGRRDIMEMVAPA--GPM---------------------YQAGTLSGNPLAMTAGIH 253 (368)
Q Consensus 201 ~di~s---~sK~~~-~G~~iG~v~~~~~~~~~~~~~--~~~---------------------~~~~t~~~~~~~~~a~~~ 253 (368)
..+.| |+=.+| ||.-.|++.+++++.+.+..+ +.. ..-.| .|.-.+.|.++
T Consensus 301 IavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKAT--SNICTAQALLA 378 (1001)
T KOG2040|consen 301 IAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKAT--SNICTAQALLA 378 (1001)
T ss_pred eeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccc--hhhhHHHHHHH
Confidence 22222 455555 566666767777666555421 000 00011 12222222222
Q ss_pred HHH----HHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH
Q 017633 254 TLK----RLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 325 (368)
Q Consensus 254 ~l~----~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (368)
-+. ...-.+ ..+++......+...|+++..+. ..-.+|=.+.+.- ....+++.
T Consensus 379 NmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel------~~k~fFDTLkI~~-------------~~s~~~~l 439 (1001)
T KOG2040|consen 379 NMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHEL------QHKPFFDTLKIRC-------------GCSAEEVL 439 (1001)
T ss_pred HHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhh------ccccccceEEEEe-------------cCcHHHHH
Confidence 222 111122 23344444455555555443221 1111222232221 11357788
Q ss_pred HHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHH
Q 017633 326 RGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 362 (368)
Q Consensus 326 ~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~ 362 (368)
++..+++|-++...+..+.+ --..+++|++.++..+.
T Consensus 440 ~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 440 DRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 88888888777665554443 34567888888877664
No 395
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=76.63 E-value=34 Score=31.50 Aligned_cols=55 Identities=22% Similarity=0.351 Sum_probs=36.1
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCE--EEEehhhhchhcccCccccccCC--Ccchhhhh
Q 017633 137 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL--LIFDEVMTGFRLAYGGAQEYFGV--TPDLTTLG 207 (368)
Q Consensus 137 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~--li~De~~~~~~~g~~~~~~~~~~--~~di~s~s 207 (368)
..++++.+++.|-.-.+ .. ++.+.+=..+++++ +++||+|. ..+||. .||...++
T Consensus 110 ekp~~K~LYITPE~AAt------~~-FQ~lLn~L~~r~~L~Y~vVDEAHC---------VSQWGHDFRPDYL~LG 168 (641)
T KOG0352|consen 110 EKPTIKMLYITPEGAAT------DG-FQKLLNGLANRDVLRYIVVDEAHC---------VSQWGHDFRPDYLTLG 168 (641)
T ss_pred cCCceeEEEEchhhhhh------hh-HHHHHHHHhhhceeeeEEechhhh---------HhhhccccCcchhhhh
Confidence 34678888887765222 22 66666666666654 88999995 345664 58877765
No 396
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=64.36 E-value=24 Score=30.32 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCc--ccCCHHHHHHHHHHHHHhCCEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGF--IAPKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~l~~i~~l~~~~~~~li 178 (368)
-+.|.+++..++.....++++|.++++.. -.+..+|..+|.+|-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 67788888888777889999998887633 44888889999999766677665
No 397
>PLN02672 methionine S-methyltransferase
Probab=63.39 E-value=63 Score=34.12 Aligned_cols=150 Identities=17% Similarity=0.105 Sum_probs=77.1
Q ss_pred HHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE---c
Q 017633 14 VLAALGETMKKGTSFG-APCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF---E 82 (368)
Q Consensus 14 v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~---~ 82 (368)
....+...++.+..+. .++..-..++..++..+ + .++.|++.+|-..|++.++++. .++ -.++. .
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~ 481 (1082)
T PLN02672 406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLF---SPR-LAIVDEHLT 481 (1082)
T ss_pred HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhh---ChH-HHhhhhhhh
Confidence 4455555555544442 23344455665555543 2 4789999999999999999865 111 12221 1
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
..-+......+...+.+. ....+ ....++.-|. .-+.+-++++.- ++.+++.---.... +..+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~-- 545 (1082)
T PLN02672 482 RWLPKKWLTSLAIENATS----DSKSD-----DVITVIEAPR-QSDLVIELIKKL--KPQVVVTGMADFEM--RTSTA-- 545 (1082)
T ss_pred ccCCHHHHhHhhhhcccc----cCccC-----CeEEEEeCCC-cchHHHHHHHhC--CCeEEEEeccchhh--hhHHH--
Confidence 112222222233322211 11111 1122333343 233555666642 34444443222221 22222
Q ss_pred HHHHHHHHHHhCCEEEEehhh
Q 017633 163 LNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~ 183 (368)
++.|.+.+++-|.+|+.|+.-
T Consensus 546 ~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 546 FEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred HHHHHHHHHhhCcEEEEehhh
Confidence 899999999999999999765
No 398
>PRK04148 hypothetical protein; Provisional
Probab=60.17 E-value=75 Score=24.23 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=20.6
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.||+|....|.+++++.|+-+++=
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4567777899999999999987763
No 399
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=58.75 E-value=19 Score=32.77 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=32.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 182 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~ 182 (368)
+...|-+.+.+.-....+++.+. |.- |.+.+ .+.+.++|+++|+++++|-=
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSD-Y~K-G~L~~----~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSD-YAK-GVLTN----VQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEec-ccc-ccchh----HHHHHHHHHHcCCcEEECCC
Confidence 34444444443222455555544 333 44555 89999999999999999933
No 400
>cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=55.33 E-value=1.8e+02 Score=27.14 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=29.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++.+++..+ ...+ +.+-....|.+.. ..+++++|+++|+.+..
T Consensus 305 ~~~~~~~ll~~~--a~di--l~~d~~~~GGit~----~~kia~lA~a~gi~~~p 350 (415)
T cd03324 305 NRVVFKQLLQAG--AIDV--VQIDSCRLGGVNE----NLAVLLMAAKFGVPVCP 350 (415)
T ss_pred CHHHHHHHHHcC--CCCE--EEeCccccCCHHH----HHHHHHHHHHcCCeEEE
Confidence 567777877742 2223 3333344455555 78999999999987654
No 401
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=51.63 E-value=24 Score=28.80 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=28.8
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 139 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
=.+++++||-.+. .|.... .+++.+++++||+.+|.
T Consensus 155 l~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 3578888888776 455566 78999999999999884
No 402
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=51.15 E-value=83 Score=23.98 Aligned_cols=57 Identities=21% Similarity=0.226 Sum_probs=35.0
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-h-CCEEE-Eehhhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-N-GALLI-FDEVMT 184 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~-~-~~~li-~De~~~ 184 (368)
+.+.|.+.+.++ ....+|+=.|.+. .|...+-....++.++..++ + ++.++ +||-++
T Consensus 39 ~~~~l~~li~~~-~i~~iVvGlP~~~-~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY-QIDGIVVGLPLNM-DGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC-CECEEEEEEEBBC-TSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh-CCCEEEEeCCccc-CCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 689999999975 2234455555543 44444444445555554444 4 88855 999996
No 403
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=50.88 E-value=1.8e+02 Score=26.43 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=31.4
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++.++++. .++=++++-....|.+.. ..+++++|+.+|+.+..
T Consensus 246 ~~~~~~~li~~----~a~div~~d~~~~GGit~----~~~ia~~A~a~gi~~~~ 291 (352)
T cd03328 246 TLAYFRRLLEA----HAVDVLQADVTRCGGVTG----FLQAAALAAAHHVDLSA 291 (352)
T ss_pred CHHHHHHHHHc----CCCCEEecCccccCCHHH----HHHHHHHHHHcCCeecc
Confidence 57788888873 233444555555555666 88999999999987664
No 404
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=50.33 E-value=1.6e+02 Score=25.23 Aligned_cols=47 Identities=6% Similarity=0.077 Sum_probs=32.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
++.++++++.+. ...++.+.+. ..|.+.. ..+++++|+++|+.++.=
T Consensus 191 ~~~~~~~~i~~~--~~d~v~~k~~--~~GGi~~----~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 191 TPHDAFRELALG--AADAVNIKTA--KTGGLTK----AQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CHHHHHHHHHhC--CCCEEEEecc--cccCHHH----HHHHHHHHHHcCCcEEec
Confidence 688888888743 3445555443 3455555 899999999999987764
No 405
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=49.98 E-value=16 Score=25.16 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhCCEEEEehhhhc
Q 017633 163 LNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~ 185 (368)
-++|+++++++|++++.|...+.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LAr 51 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLVD 51 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHHH
Confidence 58999999999999999987753
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=48.80 E-value=55 Score=28.99 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=27.6
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+++..+.+.+ .+.++..++.++|++.|+.+++|-.-.
T Consensus 132 ~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 132 IVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred EEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 45555544432 345679999999999999999995553
No 407
>smart00642 Aamy Alpha-amylase domain.
Probab=46.40 E-value=27 Score=27.75 Aligned_cols=24 Identities=17% Similarity=0.319 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhh
Q 017633 161 DFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
+.++++++-|+++|+-+|+|=+.-
T Consensus 70 ~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 70 EDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC
Confidence 449999999999999999996664
No 408
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=46.21 E-value=69 Score=23.85 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=28.9
Q ss_pred HHHHHHHHHc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+.+.+++ .....+++.+....... -.| +++.+.|++++++||.
T Consensus 58 ~~~~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 58 EEELREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEEE
Confidence 4445555553 22356777765542222 333 7899999999999885
No 409
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=46.06 E-value=1.5e+02 Score=26.88 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=29.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++.++.+.+..+ . +=++++-.+..|.+.. ..+++++|+++|+.+..
T Consensus 238 ~~~~~~~~~~~~--~--~d~v~~d~~~~GGit~----~~~~~~lA~~~gi~~~~ 283 (352)
T cd03325 238 SRWDFKELLEDG--A--VDIIQPDISHAGGITE----LKKIAAMAEAYDVALAP 283 (352)
T ss_pred CHHHHHHHHHhC--C--CCEEecCccccCCHHH----HHHHHHHHHHcCCcEec
Confidence 567777777632 2 2234444444455666 88999999999987764
No 410
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=45.10 E-value=2.2e+02 Score=25.22 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=30.3
Q ss_pred HHHHHHHHcCCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe-hhh
Q 017633 128 SALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD-EVM 183 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D-e~~ 183 (368)
..+-..+..+ .-.++++ .+.+..+||.+.. -. ---++-+|+.|++++++= |.|
T Consensus 187 sa~~~~m~~~-~vd~VlvGAd~v~~nG~v~nk-~G-T~~lA~~Ak~~~vPv~V~a~s~ 241 (303)
T TIGR00524 187 SMAAYFMQKG-EIDAVIVGADRIARNGDVANK-IG-TYQLAVLAKEFRIPFFVAAPLS 241 (303)
T ss_pred hHHHHHcccc-CCCEEEEcccEEecCCCEeEh-hh-HHHHHHHHHHhCCCEEEecccc
Confidence 3444555422 1223333 6666666654433 33 566788889999998863 444
No 411
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=44.72 E-value=2e+02 Score=24.67 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=31.0
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
++.++.+++... ....+.+.+.. .|.+.. ..+++++|+.+|+.+.+-
T Consensus 187 ~~~~~~~~~~~~--~~d~v~~k~~~--~GGit~----~~~i~~~a~~~gi~~~~~ 233 (263)
T cd03320 187 RLDDPLALAAAG--ALGALVLKPAL--LGGPRA----LLELAEEARARGIPAVVS 233 (263)
T ss_pred cccCHHHHHhcC--CCCEEEECchh--cCCHHH----HHHHHHHHHHcCCCEEEE
Confidence 455667777642 34455554433 444555 899999999999987764
No 412
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=44.37 E-value=2.2e+02 Score=25.05 Aligned_cols=107 Identities=23% Similarity=0.259 Sum_probs=57.1
Q ss_pred CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC--CCCCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCC
Q 017633 48 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 124 (368)
Q Consensus 48 ~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (368)
...+|++|.|-+..++.=++.+..-...-.|++.++ .+.|+..+ .+...|. ++.-++
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~gi-------------------ettVI~- 220 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGI-------------------ETTVIP- 220 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCC-------------------eeEEec-
Confidence 357899999988888887876654322334555432 22222111 0111111 111111
Q ss_pred CCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 125 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 125 ~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
| .++-+.+..- +...+-.-.+..+||...+.= ..-++..+++|-+++++=
T Consensus 221 -d-aaVfA~MsrV--nKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~Vl 270 (353)
T KOG1465|consen 221 -D-AAVFAMMSRV--NKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIVL 270 (353)
T ss_pred -c-HHHHHHhhhc--ceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEEe
Confidence 3 3344444421 233444445556677555544 788899999999998874
No 413
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=43.51 E-value=2.3e+02 Score=25.03 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=55.4
Q ss_pred CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC--CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCH
Q 017633 50 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 127 (368)
Q Consensus 50 ~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (368)
..+++|.|-+..+...++.+.....+-.|++.++ .+.| ...+..+... +.++..++ |
T Consensus 116 g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a~~L~~~-----------------gI~vtlI~--D- 174 (301)
T TIGR00511 116 GDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITAKELRDY-----------------GIPVTLIV--D- 174 (301)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHHHHHHHC-----------------CCCEEEEe--h-
Confidence 3578888777777777765544334455666532 2222 1111122111 11222222 2
Q ss_pred HHHHHHHHcCCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe-hhh
Q 017633 128 SALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD-EVM 183 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D-e~~ 183 (368)
..+-..+.+ -.++++ ++.+..+||.+.. -. -.-++-+|+.|++++++= |.|
T Consensus 175 sa~~~~m~~---vd~VivGad~v~~nG~v~nk-iG-T~~lA~~Ak~~~vPv~V~a~~~ 227 (301)
T TIGR00511 175 SAVRYFMKE---VDHVVVGADAITANGALINK-IG-TSQLALAAREARVPFMVAAETY 227 (301)
T ss_pred hHHHHHHHh---CCEEEECccEEecCCCEEEH-Hh-HHHHHHHHHHhCCCEEEEcccc
Confidence 344445552 223333 5666666654433 33 466788899999998863 444
No 414
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=43.48 E-value=2.4e+02 Score=25.05 Aligned_cols=47 Identities=11% Similarity=0.159 Sum_probs=32.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+++++++.+.+. ...++...+.. .|.+.. ..+++++|++||+.++.=
T Consensus 239 ~~~~~~~~~~~~--~~d~v~~~~~~--~GGi~~----~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 239 SAADAARLAGGG--AYDGINIKLMK--TGGLTE----ALRIADLARAAGLKVMVG 285 (316)
T ss_pred CHHHHHHHHhcC--CCCEEEEeccc--cCCHHH----HHHHHHHHHHcCCCEEEE
Confidence 688888888743 34455554433 444555 799999999999987763
No 415
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=42.97 E-value=2.4e+02 Score=25.06 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=53.7
Q ss_pred CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC--CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCH
Q 017633 50 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 127 (368)
Q Consensus 50 ~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (368)
..+++|.|-+..+...++.+.....+-.|++.++ ...| ...+..+... +.++..++ |
T Consensus 121 g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a~~L~~~-----------------GI~vtlI~--D- 179 (310)
T PRK08535 121 GDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITAKELAEY-----------------GIPVTLIV--D- 179 (310)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHHHHHHHC-----------------CCCEEEEe--h-
Confidence 4478888888888777765543333455665532 1122 1111111111 11223222 2
Q ss_pred HHHHHHHHcCCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 128 SALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
..+-..+.+ -.++++ .+.+..+||.+. .-. -.-++-+|+.|++++++=
T Consensus 180 sav~~~m~~---vd~VivGAd~v~~nG~v~n-kiG-T~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 180 SAVRYFMKD---VDKVVVGADAITANGAVIN-KIG-TSQIALAAHEARVPFMVA 228 (310)
T ss_pred hHHHHHHHh---CCEEEECccEEecCCCEEe-HHh-HHHHHHHHHHhCCCEEEe
Confidence 344445542 223333 566656655433 333 466788889999998863
No 416
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=41.19 E-value=29 Score=28.84 Aligned_cols=94 Identities=15% Similarity=0.193 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hchhcccCccccccCCC-cchh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVT-PDLT 204 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~~~g~~~~~~~~~~~-~di~ 204 (368)
++.+|++++.+ -+..-+=+-.. ..-. . .+..+++.++|++|++.+|+++=. .-...+..+ -|.|.. ..+-
T Consensus 24 ~~~ve~al~~G--v~~vQlR~K~~-~~~~-~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdG--VHlGq~D~~~~ 95 (211)
T COG0352 24 LEWVEAALKGG--VTAVQLREKDL-SDEE-Y--LALAEKLRALCQKYGVPLIINDRVDLALAVGADG--VHLGQDDMPLA 95 (211)
T ss_pred HHHHHHHHhCC--CeEEEEecCCC-ChHH-H--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCE--EEcCCcccchH
Confidence 78889999843 23333333332 2111 1 344789999999999998877433 111122211 133332 1234
Q ss_pred hhhhhccCCccceeeeehHHHHHH
Q 017633 205 TLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 205 s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
...|.+++++.+|+-+-+.+-...
T Consensus 96 ~ar~~~~~~~iIG~S~h~~eea~~ 119 (211)
T COG0352 96 EARELLGPGLIIGLSTHDLEEALE 119 (211)
T ss_pred HHHHhcCCCCEEEeecCCHHHHHH
Confidence 556778788889987666544333
No 417
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=39.37 E-value=22 Score=25.88 Aligned_cols=50 Identities=6% Similarity=0.102 Sum_probs=34.7
Q ss_pred ccHHHHHHHHHHHHcCeeecCC----CCC---ccccccCCCHHHHHHHHHHHHHHHh
Q 017633 317 ETTKFARFYRGMLEEGVYFAPS----QFE---AGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~----~~~---~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...++..+.+.|.++|+.+.-- |.- -..+.....+++++++++.|++.+.
T Consensus 9 qd~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 9 QDEDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH-
T ss_pred cHhhHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhc
Confidence 3466889999999999887542 211 1234567789999999999998764
No 418
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=38.03 E-value=87 Score=21.43 Aligned_cols=45 Identities=4% Similarity=0.152 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De 181 (368)
.++..+.++.+ +.+.+++-..-+. ...+.+.++|++++++++.-.
T Consensus 16 ~~~v~kai~~g--kaklViiA~D~~~--------~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRG--SVKEVVVAEDADP--------RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcC--CeeEEEEECCCCH--------HHHHHHHHHHHHcCCCEEEEC
Confidence 45666777753 5555555333221 238999999999999987653
No 419
>COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
Probab=37.89 E-value=3e+02 Score=25.08 Aligned_cols=123 Identities=16% Similarity=0.031 Sum_probs=62.0
Q ss_pred hHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCC
Q 017633 34 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 113 (368)
Q Consensus 34 ~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (368)
...+..+++.+.+++..++.+-.++.=....|++.++.....+ +..+.......-...+..-...+..+-..+...
T Consensus 173 ~d~~~v~avRe~~g~~~~l~iDan~~~~~~~A~~~~~~l~~~~-l~~iEeP~~~~d~~~~~~l~~~~~~PIa~gEs~--- 248 (372)
T COG4948 173 EDLERVRALREAVGDDVRLMVDANGGWTLEEAIRLARALEEYG-LEWIEEPLPPDDLEGLRELRAATSTPIAAGESV--- 248 (372)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCCCCcCHHHHHHHHHHhcccC-cceEECCCCccCHHHHHHHHhcCCCCEecCccc---
Confidence 3345555666666655566666666655555655554443322 444443333322221111111000000000000
Q ss_pred CCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 114 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 114 ~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+..++.+++..+ ++=++++-....|.+.. ..+|+++|+.+++.+..
T Consensus 249 -----------~~~~~~~~l~~~~----a~div~~d~~~~GGite----~~kia~~A~~~~~~v~~ 295 (372)
T COG4948 249 -----------YTRWDFRRLLEAG----AVDIVQPDLARVGGITE----ALKIAALAEGFGVMVGP 295 (372)
T ss_pred -----------ccHHHHHHHHHcC----CCCeecCCccccCCHHH----HHHHHHHHHHhCCceec
Confidence 1578888888742 33344444444565666 89999999988887653
No 420
>COG0391 Uncharacterized conserved protein [Function unknown]
Probab=37.72 E-value=3e+02 Score=24.64 Aligned_cols=49 Identities=8% Similarity=0.139 Sum_probs=28.4
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 176 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~ 176 (368)
-+.++.+++++. .-+.+.+++.....|.-+.-..+-+.+..+.+.++..
T Consensus 209 llp~I~eaLr~~--~ap~i~v~n~~~~~g~~t~~~~~~d~i~~i~~~~g~~ 257 (323)
T COG0391 209 LLPGIAEALRET--VAPIVYVCNLMTQAGKETDGLSVEDHIAALAQHYGAF 257 (323)
T ss_pred chhHHHHHHHhC--CCCEEEeccCCCCCCcccccccHHHHHHHHHHHhCcc
Confidence 366777777752 3446666666666553333333356666666666655
No 421
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=37.38 E-value=1.8e+02 Score=22.39 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
-.++-..+.++.=....++.+|..+.+. -.+ ++.+..+|.-|++++=...+-+++
T Consensus 62 DqQIga~Ia~g~id~vIFf~DPl~~~ph-epD----i~aLlRlc~v~nIP~AtN~aTA~~ 116 (143)
T TIGR00160 62 DQQIGALIAEGKIDAVIFFWDPLNAQPH-EPD----VKALLRLCTVWNIPLATNVATADF 116 (143)
T ss_pred HHHHHHHHHhCCCCEEEEecCCCCCCCC-CcC----HHHHHHHHHhhCcccccCHHHHHH
Confidence 3566666766533444555666554332 233 999999999999999999888776
No 422
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=37.08 E-value=49 Score=28.27 Aligned_cols=48 Identities=19% Similarity=0.367 Sum_probs=35.0
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.+.+++.+. +.-++++-|..+.. ..-.+.+++|.+.+++.++++++|
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRd---p~~~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRD---PAILKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCC---HHHHHHHHHHHHHHhcCCCcEEEc
Confidence 4566677665 67788887776542 112223889999999999999999
No 423
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=36.98 E-value=37 Score=33.25 Aligned_cols=28 Identities=25% Similarity=0.360 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
+++-++++++-|+++|+-||+|=+|..|
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 3444999999999999999999999877
No 424
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=36.84 E-value=1e+02 Score=25.65 Aligned_cols=54 Identities=17% Similarity=0.219 Sum_probs=34.6
Q ss_pred cccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 118 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 118 ~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.++..+++|.+.|.++++ .--.++++.+..+ ....+..+.+++.|++.|+-.++
T Consensus 46 ~vv~~d~~~~~~l~~al~---g~d~v~~~~~~~~-----~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 46 EVVEADYDDPESLVAALK---GVDAVFSVTPPSH-----PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEEES-TT-HHHHHHHHT---TCSEEEEESSCSC-----CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred eEeecccCCHHHHHHHHc---CCceEEeecCcch-----hhhhhhhhhHHHhhhccccceEE
Confidence 345556668999999998 3445555555443 33344478999999999977664
No 425
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=36.22 E-value=73 Score=25.62 Aligned_cols=52 Identities=15% Similarity=0.317 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCc-ccCC---HHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGF-IAPK---PDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~l~~i~~l~~~~~~~li~ 179 (368)
++.+++.+.+. ....++++++.....+. .... .++++.+..+|+++|+.+++
T Consensus 129 ~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45666666642 24678888877765322 1111 24678888888888877553
No 426
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=35.42 E-value=66 Score=20.47 Aligned_cols=46 Identities=17% Similarity=0.235 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 320 KFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
-..++.+.|.+.||-+.-.......+++..++++.++++.+|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 3568888899999888644433456778889999999999887765
No 427
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=35.18 E-value=36 Score=29.70 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhh
Q 017633 161 DFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
+.++++++.|+++|+.||+|=+.-
T Consensus 52 ~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 52 EDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhccccccceEEEeeecc
Confidence 339999999999999999997763
No 428
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=34.98 E-value=70 Score=26.27 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=27.9
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++|+-.+. .|.... .+++.+++++|++.++.
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 467888887655 566666 89999999999999873
No 429
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=34.70 E-value=27 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
-++|.+.+++||+++..|......
T Consensus 34 Ae~II~~Ake~~Vpi~edp~Lv~~ 57 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPLLVEL 57 (92)
T ss_pred HHHHHHHHHHcCCCcccCHHHHHH
Confidence 589999999999999999877554
No 430
>PF05213 Corona_NS2A: Coronavirus NS2A protein; InterPro: IPR007878 This entry is represented by Coronavirus non-structural protein 2A (32kDa); it is a family of uncharacterised viral proteins. Members have a phosphoesterase module (2H) [] and are predicted to be involved in RNA modification. The viral group of 2H phosphoesterases contains proteins from two unrelated virus types: the type C rotaviruses (VP3 protein, IPR011181 from INTERPRO) that are double stranded multipartite RNA viruses and the coronaviruses (NS2 protein, this group) that are positive strand RNA viruses. Given that these viruses have vertebrate hosts, it is likely that the 2H phosphoesterase domain was derived from the host by one of virus groups followed by rapid sequence divergence []. Subsequently, it may have been exchanged between the viral families. Although the direction of the exchange is not clear, it is possible that a double stranded replicative form of a subgenomic RNA transcript of the coronavirus NS2 was stabilised by a rotavirus and incorporated into its multiple double stranded RNA genome []. These proteins can be utilised as novel drug targets because of their predicted RNA modification role.
Probab=34.67 E-value=59 Score=26.77 Aligned_cols=46 Identities=28% Similarity=0.221 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCeeecCCCCCcccc-ccCCCHHHHHHHHHHHHHHHhh
Q 017633 322 ARFYRGMLEEGVYFAPSQFEAGFT-SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~~~~~-~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++.-.|+++|+-+.-.-.|++.+ .+-++++++......|.+++++
T Consensus 25 ~~LQ~~~~~eG~d~k~QkaPHlSl~mL~Isd~~i~~V~~~iq~Vidd 71 (248)
T PF05213_consen 25 KDLQFQLLEEGVDCKLQKAPHLSLGMLDISDEDIPDVETAIQKVIDD 71 (248)
T ss_pred HHHHHHHHHcCCCccccccCeeEEEEEEcChhhhhhHHHHHHHHHHH
Confidence 567788899999987776677665 6778999999999888888765
No 431
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=34.17 E-value=29 Score=30.50 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=19.4
Q ss_pred HHHHHHHHH-HhCCEEEEehhhh
Q 017633 163 LNAIRRITK-ENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~-~~~~~li~De~~~ 184 (368)
++.|.++|. .++..+|.||.|.
T Consensus 161 l~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 161 LDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred HHHHHHHHhcCCCceEEeccchh
Confidence 899999994 4789999999994
No 432
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=33.89 E-value=61 Score=26.53 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=25.5
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++++=.+. .|.... .+++.+++++|++.++.
T Consensus 152 ~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 467777777655 566677 88999999999998874
No 433
>PRK15072 bifunctional D-altronate/D-mannonate dehydratase; Provisional
Probab=33.80 E-value=2.8e+02 Score=25.72 Aligned_cols=119 Identities=16% Similarity=0.061 Sum_probs=61.1
Q ss_pred HHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC-CchhhhhhcCCCccccCCCCCCCCCCCC
Q 017633 37 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-HADPFLVKAGSGVATLGLPDSPGVPKGA 115 (368)
Q Consensus 37 ~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (368)
+..+++.+.+++.-.+.+-.++.-..+.|++.++.+. ..++..+...... .......+... ... ++......
T Consensus 194 ~~v~avre~~G~~~~l~vDaN~~w~~~~A~~~~~~l~-~~~l~~iEeP~~~~d~~~~~~L~~~-~~i-PIa~dEs~---- 266 (404)
T PRK15072 194 KLFEAVRNKFGFDLHLLHDVHHRLTPIEAARLGKSLE-PYRLFWLEDPTPAENQEAFRLIRQH-TTT-PLAVGEVF---- 266 (404)
T ss_pred HHHHHHHhhhCCCceEEEECCCCCCHHHHHHHHHhcc-ccCCcEEECCCCccCHHHHHHHHhc-CCC-CEEeCcCc----
Confidence 3455555556544456666666555677777665543 3344444444433 22221121111 000 00000000
Q ss_pred CCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 116 TYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 116 ~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.++.++++++..+ ...+ +++-....|.+.. ..+++++|+.+|+.+..
T Consensus 267 ---------~~~~~~~~li~~~--a~di--i~~d~~~~GGit~----~~kia~lA~~~gi~~~~ 313 (404)
T PRK15072 267 ---------NSIWDCKQLIEEQ--LIDY--IRTTVTHAGGITH----LRRIADFAALYQVRTGS 313 (404)
T ss_pred ---------cCHHHHHHHHHcC--CCCE--EecCccccCcHHH----HHHHHHHHHHcCCceee
Confidence 1688888888842 2233 3333344455666 89999999999987654
No 434
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=33.03 E-value=99 Score=26.70 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++.+.+.+++...+.+-+++-|-...+|-.......++++.++|+++++.+++
T Consensus 25 l~~~~~~i~~a~~~ga~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 25 LDRYLDLTRELADEKPDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred HHHHHHHHhhcccCCCCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 44444444432122233444454444443334455699999999999998774
No 435
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.96 E-value=74 Score=19.69 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|.+.||-+.-.......+++..++++.++++..|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 17 AAKMFKALAEAGINIEMISTSEIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCCEEEEEccCCeEEEEEeHHHHHHHHHHHHHHh
Confidence 467888888888666543322345667788899999988887765
No 436
>cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=32.55 E-value=2.6e+02 Score=25.22 Aligned_cols=46 Identities=26% Similarity=0.390 Sum_probs=29.3
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++.+++..+ ... ++.+-.+..|.+.. ..+++++|+++|+.+..
T Consensus 233 ~~~~~~~~i~~~--a~d--~i~~d~~~~GGit~----~~~i~~~A~~~g~~~~~ 278 (341)
T cd03327 233 TVYGFKRLLEGR--AVD--ILQPDVNWVGGITE----LKKIAALAEAYGVPVVP 278 (341)
T ss_pred CHHHHHHHHHcC--CCC--EEecCccccCCHHH----HHHHHHHHHHcCCeecc
Confidence 467777777642 222 33333344455555 78999999999987654
No 437
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=31.89 E-value=1e+02 Score=27.19 Aligned_cols=97 Identities=13% Similarity=0.189 Sum_probs=62.8
Q ss_pred HHHHcCCCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEE---Eehhhhchhcc-------cCccccccCCC
Q 017633 132 NLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLI---FDEVMTGFRLA-------YGGAQEYFGVT 200 (368)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li---~De~~~~~~~g-------~~~~~~~~~~~ 200 (368)
..++.- .+++++++-.++. .|....-.+++..|..++++..+.+| .+|++..+... ..+....|..+
T Consensus 139 ~llr~~--~vrmLIIDE~H~lLaGs~~~qr~~Ln~LK~L~NeL~ipiV~vGt~~A~~al~~D~QLa~RF~~~~Lp~W~~d 216 (302)
T PF05621_consen 139 RLLRRL--GVRMLIIDEFHNLLAGSYRKQREFLNALKFLGNELQIPIVGVGTREAYRALRTDPQLASRFEPFELPRWELD 216 (302)
T ss_pred HHHHHc--CCcEEEeechHHHhcccHHHHHHHHHHHHHHhhccCCCeEEeccHHHHHHhccCHHHHhccCCccCCCCCCC
Confidence 444432 6889999888875 67778888889999999999998877 45666433111 12344566666
Q ss_pred cchhhhhhhccCCccce--eeeehHHHHHHhc
Q 017633 201 PDLTTLGKIIGGGLPVG--AYGGRRDIMEMVA 230 (368)
Q Consensus 201 ~di~s~sK~~~~G~~iG--~v~~~~~~~~~~~ 230 (368)
.++..+=++|...+|+. .-+.++++++.+-
T Consensus 217 ~ef~~LL~s~e~~LPLr~~S~l~~~~la~~i~ 248 (302)
T PF05621_consen 217 EEFRRLLASFERALPLRKPSNLASPELARRIH 248 (302)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHH
Confidence 67665555555433333 2355677776654
No 438
>PRK14017 galactonate dehydratase; Provisional
Probab=31.86 E-value=4.1e+02 Score=24.39 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=30.2
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++.++++++..+ ++=++++-.+..|.+.. ..+++++|+++|+.+..
T Consensus 239 ~~~~~~~li~~~----a~d~v~~d~~~~GGit~----~~~ia~~A~~~gi~~~~ 284 (382)
T PRK14017 239 SRWDFKRVLEAG----GVDIIQPDLSHAGGITE----CRKIAAMAEAYDVALAP 284 (382)
T ss_pred CHHHHHHHHHcC----CCCeEecCccccCCHHH----HHHHHHHHHHcCCeEee
Confidence 577788877742 22233344444455565 78999999999987664
No 439
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=31.79 E-value=1.2e+02 Score=21.82 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++.++.+ +.+++++-..-+ ++..+++.++|+.++++++.
T Consensus 22 ~~~v~~aik~g--k~~lVI~A~D~s--------~~~kkki~~~~~~~~vp~~~ 64 (104)
T PRK05583 22 YNKCEEAIKKK--KVYLIIISNDIS--------ENSKNKFKNYCNKYNIPYIE 64 (104)
T ss_pred HHHHHHHHHcC--CceEEEEeCCCC--------HhHHHHHHHHHHHcCCCEEE
Confidence 46667777753 455554433322 22289999999999998754
No 440
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=31.66 E-value=67 Score=26.34 Aligned_cols=39 Identities=18% Similarity=0.177 Sum_probs=30.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
|.++++++++.+ +-+++.|.. -+++.+.|+++|++++--
T Consensus 69 ~~e~a~~a~~aG----A~FivSP~~------------~~~v~~~~~~~~i~~iPG 107 (196)
T PF01081_consen 69 TAEQAEAAIAAG----AQFIVSPGF------------DPEVIEYAREYGIPYIPG 107 (196)
T ss_dssp SHHHHHHHHHHT-----SEEEESS--------------HHHHHHHHHHTSEEEEE
T ss_pred CHHHHHHHHHcC----CCEEECCCC------------CHHHHHHHHHcCCcccCC
Confidence 799999999854 567777754 479999999999999975
No 441
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=31.62 E-value=3e+02 Score=22.87 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=30.4
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
|.+++++++.. -+-+++.|.. -+++.+.|+++|++++-
T Consensus 77 ~~~~~~~a~~a----GA~FivsP~~------------~~~v~~~~~~~~i~~iP 114 (213)
T PRK06552 77 DAVTARLAILA----GAQFIVSPSF------------NRETAKICNLYQIPYLP 114 (213)
T ss_pred CHHHHHHHHHc----CCCEEECCCC------------CHHHHHHHHHcCCCEEC
Confidence 78999999984 3566676654 47899999999999885
No 442
>cd03322 rpsA The starvation sensing protein RpsA from E.coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad.
Probab=31.08 E-value=4.1e+02 Score=24.16 Aligned_cols=46 Identities=22% Similarity=0.284 Sum_probs=30.5
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++.++++++..+ ...++ ++-..-.|.+.. ..+++++|+++|+.+..
T Consensus 225 ~~~~~~~~i~~~--a~di~--~~d~~~~GGit~----~~~ia~~A~~~gi~~~~ 270 (361)
T cd03322 225 SIWDWQNLIQER--LIDYI--RTTVSHAGGITP----ARKIADLASLYGVRTGW 270 (361)
T ss_pred CHHHHHHHHHhC--CCCEE--ecCccccCCHHH----HHHHHHHHHHcCCeeec
Confidence 678888888742 22233 333333455565 88999999999987764
No 443
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=31.03 E-value=1.1e+02 Score=27.37 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~ 230 (368)
.+++|...+++.|+-+|+|-.- ..+..+|.+++-+++-+-+| .|+|+=+-+..++..+-..
T Consensus 50 ~~~ell~~Anklg~~vivDvnP--------sil~~l~~S~~~l~~f~e~G~~glRlD~gfS~eei~~ms~ 111 (360)
T COG3589 50 RFKELLKEANKLGLRVIVDVNP--------SILKELNISLDNLSRFQELGVDGLRLDYGFSGEEIAEMSK 111 (360)
T ss_pred HHHHHHHHHHhcCcEEEEEcCH--------HHHhhcCCChHHHHHHHHhhhhheeecccCCHHHHHHHhc
Confidence 4889999999999999999322 23556777777777778888 6899988777776655444
No 444
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=30.83 E-value=2.6e+02 Score=24.65 Aligned_cols=51 Identities=6% Similarity=0.001 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+++.+.+.+-|+.++.-+..-+. -.... .+++..+|++.+++++.|-=|.
T Consensus 190 ~eqf~kni~~LP~~vksRl~LEND---d~sYs----~eelL~lCek~~iPlVfD~HHh 240 (347)
T COG4294 190 LEQFIKNIQRLPDSVKSRLTLEND---DKSYS----TEELLPLCEKLNIPLVFDAHHH 240 (347)
T ss_pred HHHHHHHHhhcCHHHHHhheeecc---ccccc----HHHHHHHHHHhCCCEEEechhh
Confidence 555555555444444433332222 12233 7899999999999999996554
No 445
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.82 E-value=1.1e+02 Score=24.46 Aligned_cols=52 Identities=17% Similarity=0.140 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcc--cCC----HHHHHHHHHHHHHhCCEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFI--APK----PDFLNAIRRITKENGALLI 178 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~--~~~----~~~l~~i~~l~~~~~~~li 178 (368)
++.+-+.+++..++.+++++.|.+...... ... .++-+.+.++|+++++.+|
T Consensus 95 l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 95 YETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 444444444333456677776653221111 111 2345678899999998765
No 446
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=30.75 E-value=2.1e+02 Score=25.98 Aligned_cols=45 Identities=9% Similarity=0.085 Sum_probs=26.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li 178 (368)
++.++.+.+... .+=++.+-.+..|.+.. ..+++++|+.+|+.++
T Consensus 248 ~~~~~~~~i~~~----~~d~i~~~~~~~GGit~----~~~ia~~A~~~gi~~~ 292 (355)
T cd03321 248 GPEEMFKALSAG----ACDLVMPDLMKIGGVTG----WLRASALAEQAGIPMS 292 (355)
T ss_pred CHHHHHHHHHhC----CCCeEecCHhhhCCHHH----HHHHHHHHHHcCCeec
Confidence 567777777632 22223333333444555 7788888888888653
No 447
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=30.25 E-value=1.4e+02 Score=20.53 Aligned_cols=47 Identities=9% Similarity=0.199 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+...+.++.+ +.+.+++-..-+ ++..+.+.++|++++++++.....
T Consensus 13 ~~~vlkaIk~g--kakLViiA~Da~--------~~~~k~i~~~c~~~~Vpv~~~~t~ 59 (82)
T PRK13601 13 AKQTLKAITNC--NVLQVYIAKDAE--------EHVTKKIKELCEEKSIKIVYIDTM 59 (82)
T ss_pred hHHHHHHHHcC--CeeEEEEeCCCC--------HHHHHHHHHHHHhCCCCEEEeCCH
Confidence 35556666643 555555533322 233899999999999999755433
No 448
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=30.24 E-value=53 Score=24.71 Aligned_cols=17 Identities=6% Similarity=0.059 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhCCEEEE
Q 017633 163 LNAIRRITKENGALLIF 179 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~ 179 (368)
-+++.++|++++++|+.
T Consensus 94 p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 94 PPELIELAEKYNIPLLR 110 (127)
T ss_dssp -HHHHHHHHHCT--EEE
T ss_pred CHHHHHHHHHhCCcEEE
Confidence 47899999999999875
No 449
>PRK06683 hypothetical protein; Provisional
Probab=29.96 E-value=1.4e+02 Score=20.52 Aligned_cols=48 Identities=8% Similarity=0.065 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.....+.++.+ +.+.+++-..-+ +...+.+.++|+.++++++.-+.-.
T Consensus 16 ~~~v~kaik~g--kaklViiA~Da~--------~~~~~~i~~~~~~~~Vpv~~~~t~~ 63 (82)
T PRK06683 16 HKRTLEAIKNG--IVKEVVIAEDAD--------MRLTHVIIRTALQHNIPITKVESVR 63 (82)
T ss_pred HHHHHHHHHcC--CeeEEEEECCCC--------HHHHHHHHHHHHhcCCCEEEECCHH
Confidence 35556666653 555555533321 2228999999999999987665443
No 450
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=29.79 E-value=69 Score=23.65 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHhCC-EEEEehhhh
Q 017633 159 KPDFLNAIRRITKENGA-LLIFDEVMT 184 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~-~li~De~~~ 184 (368)
..+.++.+.+..++++. ++|+||++.
T Consensus 72 ~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 72 SDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 34447888888888887 899999995
No 451
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=29.53 E-value=4.1e+02 Score=23.66 Aligned_cols=64 Identities=14% Similarity=0.196 Sum_probs=37.6
Q ss_pred ccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHH-------HHHHHHHHhCC---EE--EEehhhhch
Q 017633 121 TAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLN-------AIRRITKENGA---LL--IFDEVMTGF 186 (368)
Q Consensus 121 ~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~-------~i~~l~~~~~~---~l--i~De~~~~~ 186 (368)
..+..|.+.+.++++++. +.+.=+-.|+. ..-.+..|..|++ -|.+.+++|.. ++ =.||+|.++
T Consensus 57 ~~DI~D~~~v~~~~~~~~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l 133 (340)
T COG1088 57 QGDICDRELVDRLFKEYQPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDL 133 (340)
T ss_pred eccccCHHHHHHHHHhcCCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccc
Confidence 334448899999998642 22222222332 2333455555543 68888999873 33 379999766
No 452
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=29.24 E-value=1.6e+02 Score=22.23 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=31.5
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH-HHHHhCCE-EEEehhhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR-ITKENGAL-LIFDEVMT 184 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~-l~~~~~~~-li~De~~~ 184 (368)
+.+.|.+.+.++. ...+|+=.|.+.+ |..-+.....++.++ |.+++++. ..+||-++
T Consensus 36 ~~~~l~~~i~~~~-~~~iVvGlP~~~d-G~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKEWT-PDKIVVGLPLNMD-GTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHcC-CCEEEEeccCCCC-cCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 5788888888752 3445555566544 333332222333333 33445766 45898886
No 453
>PRK15440 L-rhamnonate dehydratase; Provisional
Probab=29.23 E-value=4.4e+02 Score=24.42 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=31.0
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++.+++.. .++=++++-....|.+.. ..+|+++|+.+|+.+..
T Consensus 272 ~~~~~~~li~~----~a~Divq~d~~~~GGit~----~~kia~lA~a~gi~~~p 317 (394)
T PRK15440 272 TLQGFRTLLEM----GCIDIIQPDVGWCGGLTE----LVKIAALAKARGQLVVP 317 (394)
T ss_pred CHHHHHHHHHc----CCCCEEeCCccccCCHHH----HHHHHHHHHHcCCeecc
Confidence 46777777763 234445555555555565 88999999999988654
No 454
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.74 E-value=4.5e+02 Score=23.92 Aligned_cols=41 Identities=12% Similarity=0.060 Sum_probs=29.1
Q ss_pred CeEEEEEcccC-----CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 140 EIAAIILEPVV-----GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 140 ~~~~~~~~~~~-----~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
+..+++++... +-+-...+ +..|..+.+.+++++|+|-.|+
T Consensus 236 n~~viL~erG~rtf~s~y~~~~~d----l~ai~~lk~~~~lPVi~DpsH~ 281 (352)
T PRK13396 236 NPNVILCERGIRTFDRQYTRNTLD----LSVIPVLRSLTHLPIMIDPSHG 281 (352)
T ss_pred CCeEEEEecCCccCcCCCCCCCcC----HHHHHHHHHhhCCCEEECCccc
Confidence 55677776621 11223444 9999999888899999998885
No 455
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=28.63 E-value=1e+02 Score=25.70 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=27.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++|+-.+. .|.... ++++.+++++||+.++.
T Consensus 168 ~p~~vicEil~~-dG~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCELTNP-DGTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEEecC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 467888887664 366666 89999999999999873
No 456
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=28.37 E-value=78 Score=18.54 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=17.9
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEE
Q 017633 157 APKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.++-+|++.|.+.++++|+.=|+
T Consensus 13 ~Dp~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 13 KDPLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HCHHHHHHHHHHHHhhCCEEEEE
Confidence 35567789999999999987554
No 457
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=28.07 E-value=64 Score=27.29 Aligned_cols=52 Identities=12% Similarity=0.052 Sum_probs=33.2
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De 181 (368)
.+..+++.+....+-+-.+=+ +-++....|++.+++..++|++||+.+..-.
T Consensus 10 ~~~~~~d~Le~~g~yID~lKf----g~Gt~~l~~~~~l~eki~la~~~~V~v~~GG 61 (237)
T TIGR03849 10 PPKFVEDYLKVCGDYITFVKF----GWGTSALIDRDIVKEKIEMYKDYGIKVYPGG 61 (237)
T ss_pred CHHHHHHHHHHhhhheeeEEe----cCceEeeccHHHHHHHHHHHHHcCCeEeCCc
Confidence 466677777632111111111 2245567777789999999999999888764
No 458
>TIGR00075 hypD hydrogenase expression/formation protein HypD. HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.
Probab=28.07 E-value=2.9e+02 Score=25.14 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=59.8
Q ss_pred CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHH
Q 017633 50 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVS 128 (368)
Q Consensus 50 ~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 128 (368)
.+|.+..|-.+|+..|-+ ++++.|+.+.-+|-.+.......-.. ... ...+++. +...+ ..+.
T Consensus 116 adVriVYSpldAl~iA~~-----nPdk~VVF~avGFETTaP~~A~~i~~-a~~---~~~~Nfs-------vl~~hkl~PP 179 (369)
T TIGR00075 116 ADVRIVYSPMDALKIAKE-----NPDRKVVFFAIGFETTAPTTASTLLS-AKA---EDINNFF-------FLSAHRLVPP 179 (369)
T ss_pred CCEEEEeCHHHHHHHHHH-----CCCCeEEEEecCchhccHHHHHHHHH-HHH---cCCCcEE-------EEEeccccHH
Confidence 457777788888887765 45667877777776544322211100 000 0011110 01111 1477
Q ss_pred HHHHHHHcCCCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 129 ALENLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 129 ~le~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.++.++.....+.-+++.-...++ .| .+.-..++++|+++.++=
T Consensus 180 a~~~ll~~~~~~idgfi~PGHVs~I~G--------~~~y~~l~~~y~~P~VVa 224 (369)
T TIGR00075 180 AVEALLENPAVQIDAFLAPGHVSTIIG--------AKPYAPIAEKYKIPIVIA 224 (369)
T ss_pred HHHHHHcCCCCCccEEEecCEEEEEec--------cchhHHHHHHcCCCeEEe
Confidence 888888654345667766554444 34 455577899999998874
No 459
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.02 E-value=80 Score=26.01 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=31.5
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
|.+++++++.. -+-+++.|.. -+++.+.|++++++.+--
T Consensus 65 ~~e~a~~ai~a----GA~FivSP~~------------~~~vi~~a~~~~i~~iPG 103 (201)
T PRK06015 65 NAKQFEDAAKA----GSRFIVSPGT------------TQELLAAANDSDVPLLPG 103 (201)
T ss_pred CHHHHHHHHHc----CCCEEECCCC------------CHHHHHHHHHcCCCEeCC
Confidence 79999999984 4567777754 479999999999998865
No 460
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=27.83 E-value=1e+02 Score=19.01 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|.+.||-+.--......+++..++++.+++++.|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 17 AAKMFEALAEAGINIEMISTSEIKISCLIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceEEEEEeHHHHHHHHHHHHHHh
Confidence 467888888888666443222345667788899999988887765
No 461
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.82 E-value=1.1e+02 Score=19.43 Aligned_cols=45 Identities=7% Similarity=-0.070 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|.+.+|.+...+.....+++..++++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 467777787778777655544566777889999999999886654
No 462
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=27.65 E-value=1.4e+02 Score=21.35 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
..+..+.++.+ +.+.+++-... +++..+.+.++|++++++++.
T Consensus 21 ~~~v~kai~~g--kaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 21 SKRTIKAIKLG--KAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHHcC--CceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 45556666643 45555553322 233489999999999999865
No 463
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=27.55 E-value=2.2e+02 Score=23.32 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=20.8
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+|++.-.+++.|.+.| .+..+++++++|+.++.
T Consensus 115 vILLTDG~n~~~~i~P----~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 115 VIVLSDANLERYGIQP----KKLADALAREPNVNAFV 147 (191)
T ss_pred EEEEeCCCcCCCCCCh----HHHHHHHHHhCCCEEEE
Confidence 3444344444555666 55568999999997665
No 464
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=27.36 E-value=4.1e+02 Score=24.21 Aligned_cols=107 Identities=15% Similarity=0.115 Sum_probs=60.6
Q ss_pred CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHH
Q 017633 50 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVS 128 (368)
Q Consensus 50 ~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 128 (368)
.+|.+..|-.+|+..|-. ++++.|+.+.-+|-.+.......- ..... ...+++. +...+ ..+.
T Consensus 110 adVriVYSpldAl~iA~~-----nP~k~vVF~avGFETTaP~~A~~i-~~A~~---~~~~Nfs-------vl~~hkl~PP 173 (364)
T PRK15062 110 ADVRIVYSPLDALKIARE-----NPDKEVVFFAIGFETTAPATAATL-LQAKA---EGLKNFS-------VLSSHKLVPP 173 (364)
T ss_pred CCEEEEeCHHHHHHHHHH-----CCCCeEEEEecCchhccHHHHHHH-HHHHH---cCCCCEE-------EEEeccccHH
Confidence 457777778888877664 456678877777765433221111 00000 0011110 01111 1478
Q ss_pred HHHHHHHcCCCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 129 ALENLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 129 ~le~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.++.++.+...+.-+++.-..-++ .| .+.-..++++|+++.++=
T Consensus 174 a~~~ll~~~~~~idgfi~PGHVstI~G--------~~~y~~l~~~y~~P~VVa 218 (364)
T PRK15062 174 AMRALLEDPELRIDGFIAPGHVSTIIG--------TEPYEFLAEEYGIPVVVA 218 (364)
T ss_pred HHHHHHcCCCCCccEEEecCEeEEEec--------cchhHHHHHHcCCCeEEe
Confidence 888888765446777777555444 34 455577889999998874
No 465
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=26.94 E-value=4.8e+02 Score=23.60 Aligned_cols=54 Identities=11% Similarity=0.045 Sum_probs=32.6
Q ss_pred CHHHHHHHHHcCCCCeEEE-----EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAI-----ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++.++++..+.+.+++- +|.+ -...|.-.|...-+.++++.++++++.+|.|
T Consensus 160 T~e~a~~Li~aGAD~ikVgiGpGSictt-R~~~Gvg~pqltAv~~~a~aa~~~~v~VIaD 218 (343)
T TIGR01305 160 TGEMVEELILSGADIVKVGIGPGSVCTT-RTKTGVGYPQLSAVIECADAAHGLKGHIISD 218 (343)
T ss_pred CHHHHHHHHHcCCCEEEEcccCCCcccC-ceeCCCCcCHHHHHHHHHHHhccCCCeEEEc
Confidence 7899999998754433332 1111 1223333344444666667777788999999
No 466
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=26.77 E-value=1.3e+02 Score=27.36 Aligned_cols=59 Identities=22% Similarity=0.243 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
+.++++.++|+++|.-+++|=.-. .+..++..++-.++=|-+| .|+|+=+-+..+++++
T Consensus 47 ~~~~~l~~~a~~~~~~v~~Disp~--------~l~~lg~~~~dl~~~~~lGi~~lRlD~Gf~~~~ia~ 106 (357)
T PF05913_consen 47 ERLKELLKLAKELGMEVIADISPK--------VLKKLGISYDDLSFFKELGIDGLRLDYGFSGEEIAK 106 (357)
T ss_dssp HHHHHHHHHHHHCT-EEEEEE-CC--------HHHTTT-BTTBTHHHHHHT-SEEEESSS-SCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCHH--------HHHHcCCCHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 448999999999999999993332 2334444432222223355 4566665555444433
No 467
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=26.66 E-value=94 Score=25.68 Aligned_cols=39 Identities=15% Similarity=0.306 Sum_probs=30.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
|.+++++++..+ +-+++.|.. -.++.+.|+++|++.+--
T Consensus 69 ~~~~a~~a~~aG----A~FivsP~~------------~~~v~~~~~~~~i~~iPG 107 (204)
T TIGR01182 69 NPEQLRQAVDAG----AQFIVSPGL------------TPELAKHAQDHGIPIIPG 107 (204)
T ss_pred CHHHHHHHHHcC----CCEEECCCC------------CHHHHHHHHHcCCcEECC
Confidence 799999999843 556666654 368999999999998874
No 468
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=26.59 E-value=1.1e+02 Score=19.63 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCeeecC--CCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 320 KFARFYRGMLEEGVYFAP--SQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~--~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
-..++.+.|.+.||-+.- .+.....+++..++++.++++..|-+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 356788888899988733 2222356677789999999999987765
No 469
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=26.51 E-value=4.8e+02 Score=23.51 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=31.3
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++++++++++++ ..-+ +++-....|.+.. ..+++++|+++|+.++.
T Consensus 251 ~~~~~~~~i~~~--~~d~--v~~k~~~~GGi~~----~~~i~~~a~~~g~~~~~ 296 (357)
T cd03316 251 TRWEFRDLLEAG--AVDI--IQPDVTKVGGITE----AKKIAALAEAHGVRVAP 296 (357)
T ss_pred cHHHHHHHHHhC--CCCE--EecCccccCCHHH----HHHHHHHHHHcCCeEec
Confidence 688888888743 2223 3333344455555 78999999999997665
No 470
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.95 E-value=1.3e+02 Score=19.11 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCeeecC--CCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 321 FARFYRGMLEEGVYFAP--SQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~--~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|.+.||-+.- .+.....+++..++++.++++..|-+.+
T Consensus 17 ~~~i~~aL~~~~I~v~~i~~g~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 17 LERAFHVLYTKGVNVQMISQGASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHCCCCEEEEEecCccceEEEEEeHHHHHHHHHHHHHHH
Confidence 46888889899877732 2223455677788999999999887654
No 471
>PRK07283 hypothetical protein; Provisional
Probab=25.85 E-value=1.5e+02 Score=21.10 Aligned_cols=44 Identities=7% Similarity=0.091 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.+.+++.++.+ +.+.+++-..-+ ++..+.+.+.|+.|+++++..
T Consensus 23 ~~~v~~aik~g--k~~lVi~A~Das--------~~~~kk~~~~~~~~~Vp~~~~ 66 (98)
T PRK07283 23 EELVVKAIQSG--QAKLVFLANDAG--------PNLTKKVTDKSNYYQVEVSTV 66 (98)
T ss_pred HHHHHHHHHcC--CccEEEEeCCCC--------HHHHHHHHHHHHHcCCCEEEe
Confidence 46677778754 444444433322 222789999999999988654
No 472
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=25.84 E-value=3.7e+02 Score=21.93 Aligned_cols=37 Identities=5% Similarity=0.133 Sum_probs=24.6
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
++.+++.......+|.... ++.+..+...+|..++-.
T Consensus 107 K~~~~f~s~g~~~Gg~~~~----l~~l~~~~~~~gm~vv~~ 143 (200)
T PRK03767 107 KVGSVFTSTGTQHGGQETT----ITSTHTTLLHHGMVIVGL 143 (200)
T ss_pred CEEEEEEeCCCCCCChHHH----HHHHHHHHHHcCCEEeCC
Confidence 5666666554444554444 888999999999876553
No 473
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.83 E-value=1.2e+02 Score=25.49 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=29.4
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE-Eehhh
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI-FDEVM 183 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li-~De~~ 183 (368)
.+.+++|+-.+. .|.... .+++.+++++||+.++ ++|..
T Consensus 172 ~P~~vicEil~~-dG~ma~----~~~l~~fA~~~~l~iisi~dli 211 (230)
T PRK00014 172 RPAGVLCELMNA-DGTMMR----GASLERYAAKEGLVALAIDELA 211 (230)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 467888877654 366666 8999999999999987 45544
No 474
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=25.74 E-value=4.6e+02 Score=22.99 Aligned_cols=55 Identities=5% Similarity=-0.064 Sum_probs=28.2
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH--hcCCceEEEEcCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--FTGRERIIKFEGCYHG 87 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~--~~~~~~vi~~~~~~~~ 87 (368)
.+-..++.+...+...+.-.+++..++ ....-++.+++. ..+-|.+++.++.|..
T Consensus 53 ~eEr~~~~~~~~~~~~~~~pvi~gv~~-~~t~~~i~la~~a~~~Gad~v~v~~P~y~~ 109 (290)
T TIGR00683 53 TEEKKEIFRIAKDEAKDQIALIAQVGS-VNLKEAVELGKYATELGYDCLSAVTPFYYK 109 (290)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHHHHHHHhCCCEEEEeCCcCCC
Confidence 344555666555555443345555432 223333333322 1366788888776654
No 475
>PF07282 OrfB_Zn_ribbon: Putative transposase DNA-binding domain; InterPro: IPR010095 This entry represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by IPR001959 from INTERPRO, and other proteins. More information about these proteins can be found at Protein of the Month: Transposase [].
Probab=25.65 E-value=96 Score=20.12 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhCCEEE-Eehhhh
Q 017633 162 FLNAIRRITKENGALLI-FDEVMT 184 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li-~De~~~ 184 (368)
+.+.|...+.++|+.++ +|+.|+
T Consensus 4 ~~~~L~yka~~~G~~v~~v~~~~T 27 (69)
T PF07282_consen 4 FRQRLEYKAEEYGIQVVEVDEAYT 27 (69)
T ss_pred HHHHHHHHHHHhCCEEEEECCCCC
Confidence 57788899999998865 888885
No 476
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=25.44 E-value=4.3e+02 Score=24.01 Aligned_cols=46 Identities=15% Similarity=0.082 Sum_probs=29.9
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
++.++.+++... ...++.+.+.. .|.+.. ..+++++|+++|+.++.
T Consensus 250 ~~~~~~~~i~~~--~~d~~~~d~~~--~GGit~----~~~~~~~a~~~gi~~~~ 295 (365)
T cd03318 250 GPADAFELARRG--AADVFSLKIAK--SGGLRR----AQKVAAIAEAAGIALYG 295 (365)
T ss_pred CHHHHHHHHHhC--CCCeEEEeecc--cCCHHH----HHHHHHHHHHcCCceee
Confidence 577777777642 23344444433 344555 78899999999987664
No 477
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=25.17 E-value=1.3e+02 Score=27.26 Aligned_cols=45 Identities=20% Similarity=0.182 Sum_probs=28.6
Q ss_pred CCeEEEEEcccCCCCCcccCCH-------------HHHHHHHHHHHHhCCEEEEehhh
Q 017633 139 GEIAAIILEPVVGNSGFIAPKP-------------DFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~-------------~~l~~i~~l~~~~~~~li~De~~ 183 (368)
++-.+++.||.+-.-...+.|+ +.--+|++++++||++++.|=--
T Consensus 261 p~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enppL 318 (363)
T COG1377 261 PKADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPPL 318 (363)
T ss_pred CCCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChHH
Confidence 3445777777653322222222 22468999999999999999433
No 478
>TIGR01766 tspaseT_teng_C transposase, IS605 OrfB family, central region. This model represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by pfam model pfam01385, and other proteins.
Probab=25.17 E-value=86 Score=21.14 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCEEE-Eehhhh
Q 017633 163 LNAIRRITKENGALLI-FDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li-~De~~~ 184 (368)
.+.|...|.++|+.++ +|+.|+
T Consensus 59 ~~~l~yka~~~Gi~v~~v~~~yT 81 (82)
T TIGR01766 59 ISKIKYKAEEYGIEVIEVNPAYT 81 (82)
T ss_pred HHHHHHHHHHcCCeEEEeCcccc
Confidence 6777888899998865 777764
No 479
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.09 E-value=1.3e+02 Score=25.08 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=27.1
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++|+-.+ ..|.... .+++.+++++||+.++.
T Consensus 167 ~p~~vicEil~-~dG~ma~----~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEITN-DDGTMAR----TPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEEec-CCCCccC----HHHHHHHHHHcCCcEEE
Confidence 45778887765 3466666 89999999999999874
No 480
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=24.91 E-value=80 Score=27.10 Aligned_cols=20 Identities=25% Similarity=0.368 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCEEEEe
Q 017633 161 DFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++++.|+++|+.+|+|
T Consensus 62 ~~ld~~v~~a~~~gi~vild 81 (281)
T PF00150_consen 62 ARLDRIVDAAQAYGIYVILD 81 (281)
T ss_dssp HHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEE
Confidence 44889999999999999998
No 481
>PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP.; GO: 0003824 catalytic activity; PDB: 3VIU_A 2Z1T_A 2Z1U_A 3C9U_B 3C9S_A 3C9R_A 1VQV_A 3C9T_B 3M84_A 3QTY_A ....
Probab=24.90 E-value=1.2e+02 Score=21.10 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEE
Q 017633 159 KPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~ 179 (368)
-.+.++.+.+.|+++|+.++-
T Consensus 73 l~~~~~Gi~~~~~~~g~~ivG 93 (96)
T PF00586_consen 73 LKEIVKGIAEACREFGIPIVG 93 (96)
T ss_dssp HHHHHHHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHHHHHHhCCcEeC
Confidence 345577888999999998873
No 482
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=24.35 E-value=88 Score=30.78 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=25.5
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
+++|-+.. .++..++|++||.++|.-.+|.|
T Consensus 165 GTpgPitt----~~EA~eF~k~yG~PvI~KAAyGG 195 (1176)
T KOG0369|consen 165 GTPGPITT----VEEALEFVKEYGLPVIIKAAYGG 195 (1176)
T ss_pred CCCCCccc----HHHHHHHHHhcCCcEEEeecccC
Confidence 44455555 89999999999999999999964
No 483
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.32 E-value=63 Score=25.27 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=28.5
Q ss_pred cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhc
Q 017633 197 FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 197 ~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~ 230 (368)
-.+.||+..+.|+|. +|-|+|+++..+.+...+.
T Consensus 111 C~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~ 145 (217)
T COG3155 111 CSVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIF 145 (217)
T ss_pred ceeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHc
Confidence 346799999999999 8999999988887776665
No 484
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=24.07 E-value=2.9e+02 Score=20.21 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCCCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 128 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
..+.+.+.++ +...++..|.. +......+ -..|++.|.+|+++++.-
T Consensus 60 ~~i~~~i~~g--~i~~VInt~~~~~~~~~~~d----g~~iRr~a~~~~Ip~~Tt 107 (115)
T cd01422 60 QQIGALIAEG--EIDAVIFFRDPLTAQPHEPD----VKALLRLCDVYNIPLATN 107 (115)
T ss_pred hHHHHHHHcC--ceeEEEEcCCCCCCCccccc----HHHHHHHHHHcCCCEEEc
Confidence 4456666653 66677666543 22221222 789999999999998853
No 485
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=24.02 E-value=76 Score=27.38 Aligned_cols=47 Identities=19% Similarity=0.343 Sum_probs=27.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH---HHHHHHHhCCEEEEehhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA---IRRITKENGALLIFDEVM 183 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~---i~~l~~~~~~~li~De~~ 183 (368)
+++++++.+. ...++++.+ |.. .+ +.++. +.+.+++++.++|+|-.-
T Consensus 44 ~~~e~~~~~~----~~~alvi~~-----G~l-~~-~~~~~i~~~~~~a~~~~~pvVlDpv~ 93 (263)
T PRK09355 44 APEEAEEMAK----IAGALVINI-----GTL-TE-ERIEAMLAAGKIANEAGKPVVLDPVG 93 (263)
T ss_pred CHHHHHHHHH----hcCceEEeC-----CCC-CH-HHHHHHHHHHHHHHhcCCCEEECCcc
Confidence 5778887775 334455522 322 22 22444 445578899999999544
No 486
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=23.94 E-value=2.6e+02 Score=20.80 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=24.1
Q ss_pred HHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH---HHHHHHHHHhCCEE
Q 017633 128 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL---NAIRRITKENGALL 177 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l---~~i~~l~~~~~~~l 177 (368)
+-+++++..+ ..+.+ +-.+ .++|...|+.+-+ ++|.+.|+.-|+.|
T Consensus 55 ~I~~~al~~~--A~~vI-l~HN-HPsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 55 EIFRRALRLN--ASSVI-LAHN-HPSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp HHHHHHHHTT---SEEE-EEEE--TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred HHHHHHHhhC--CceEE-EEEE-cCCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 4556777643 33333 3343 3356677777667 78888888887755
No 487
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=23.91 E-value=3.3e+02 Score=20.66 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhCCEEEE
Q 017633 160 PDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+.++.+.|++.|+.++.
T Consensus 43 ~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 43 RDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred cCHHHHHHHHHHHCCCEEEE
Confidence 46699999999999998774
No 488
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=23.87 E-value=1.9e+02 Score=21.00 Aligned_cols=44 Identities=9% Similarity=-0.014 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.+...++++.+ +.+.+++-..-+ +...+.+.+.|+.++++++..
T Consensus 30 ~~~vlkalk~g--kaklViiA~D~~--------~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 30 TKSTLKALRNG--KAKLVIISNNCP--------PIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHHcC--CeeEEEEeCCCC--------HHHHHHHHHHHhhcCCCEEEe
Confidence 35556666643 555555543332 222899999999999998763
No 489
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=23.50 E-value=5e+02 Score=22.67 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=51.0
Q ss_pred CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc--CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCH
Q 017633 50 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFE--GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 127 (368)
Q Consensus 50 ~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (368)
..+++|.|-+..+...++.+......-.|++.. |.+.|... +-.+...++ ++..++ |
T Consensus 110 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~~GI-----------------~vtlI~--D- 168 (275)
T PRK08335 110 GDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEFLGI-----------------EFEVIT--D- 168 (275)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHHCCC-----------------CEEEEe--c-
Confidence 347777777777777776554333344566653 22333322 222221111 122221 2
Q ss_pred HHHHHHHHcCCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 128 SALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 128 ~~le~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
..+-..+.+ -.++++ ++.+..+|+.+.. -. ---++-+|+.|++++++
T Consensus 169 sa~~~~m~~---vd~VivGAD~I~~nG~v~NK-iG-T~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 169 AQLGLFAKE---ATLALVGADNVTRDGYVVNK-AG-TYLLALACHDNGVPFYV 216 (275)
T ss_pred cHHHHHHHh---CCEEEECccEEecCCCEeeh-hh-HHHHHHHHHHcCCCEEE
Confidence 222333442 223333 5556555543332 22 35567788999999886
No 490
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=23.50 E-value=4.9e+02 Score=22.55 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=24.2
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE 172 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~ 172 (368)
+.+.|++++.+-.+.-+.+++++.. |+.+-++|++
T Consensus 165 N~elLk~~I~~lk~~GatIifSsH~------------Me~vEeLCD~ 199 (300)
T COG4152 165 NVELLKDAIFELKEEGATIIFSSHR------------MEHVEELCDR 199 (300)
T ss_pred hHHHHHHHHHHHHhcCCEEEEecch------------HHHHHHHhhh
Confidence 6888888887643455566665544 7788888876
No 491
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=23.32 E-value=4.4e+02 Score=21.95 Aligned_cols=46 Identities=11% Similarity=0.189 Sum_probs=29.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+.+++.+.+.+. ...++.+.+. ..|.+.. ..+++++|+++|+.+..
T Consensus 156 ~~~~~~~~~~~~--~~d~~~~k~~--~~GGi~~----~~~i~~~a~~~gi~~~~ 201 (229)
T cd00308 156 TVDDALEALELG--AVDILQIKPT--RVGGLTE----SRRAADLAEAFGIRVMV 201 (229)
T ss_pred CHHHHHHHHHcC--CCCEEecCcc--ccCCHHH----HHHHHHHHHHcCCEEee
Confidence 567776666632 3334444443 3344555 78999999999998776
No 492
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=23.22 E-value=1.7e+02 Score=18.22 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCeeecCC--CCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 320 KFARFYRGMLEEGVYFAPS--QFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~--~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
...++.+.|.+.||-+--- +.....+++..++++.++++++|-+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHH
Confidence 3567889999998766321 112356777888899998888887665
No 493
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=23.19 E-value=77 Score=20.52 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=16.0
Q ss_pred CCcccCCHHHHHHHHHHHHHhCC
Q 017633 153 SGFIAPKPDFLNAIRRITKENGA 175 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~ 175 (368)
+|.+ +.+.++.|++++++||.
T Consensus 18 ~G~i--~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 18 GGRI--SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp GGEE--EHHHHHHHHHHHHHHST
T ss_pred CEEE--CHHHHHHHHHHHHHhCC
Confidence 4554 34459999999999984
No 494
>PF13840 ACT_7: ACT domain ; PDB: 3S1T_A 1ZHV_A 3AB4_K 3AB2_O 2DTJ_A 3AAW_A 2RE1_B 3MAH_A 1ZVP_D.
Probab=23.07 E-value=56 Score=21.08 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHH
Q 017633 320 KFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
-...+...|.++||-+..-. .....++...++++++++++|.+
T Consensus 23 v~a~i~~~La~~~I~i~~is-S~~~~~ilV~~~~~~~A~~~L~~ 65 (65)
T PF13840_consen 23 VAAKIFSALAEAGINIFMIS-SEISISILVKEEDLEKAVEALHE 65 (65)
T ss_dssp HHHHHHHHHHHTTS-ECEEE-ESSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEE-EeeeEEEEEeHHHHHHHHHHhcC
Confidence 35678899999998765443 33445666788999999998864
No 495
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.06 E-value=73 Score=30.35 Aligned_cols=22 Identities=27% Similarity=0.230 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
++++++-|+++|+.||+|-+.-
T Consensus 83 l~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 83 LLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred HHHHHHHHHHCCCEEEEEECcc
Confidence 9999999999999999997773
No 496
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=22.95 E-value=2.5e+02 Score=20.19 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.+-+.++++.+ +-+++|-+.. .+.+..++|.++++++|..+.+.
T Consensus 76 ~~~~~~~l~~g----~~v~~EKP~~------~~~~~~~~l~~~a~~~~~~~~Vg 119 (120)
T PF01408_consen 76 AEIAKKALEAG----KHVLVEKPLA------LTLEEAEELVEAAKEKGVKVMVG 119 (120)
T ss_dssp HHHHHHHHHTT----SEEEEESSSS------SSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHcC----CEEEEEcCCc------CCHHHHHHHHHHHHHhCCEEEEe
Confidence 56667777743 3777777542 23344999999999999988764
No 497
>PRK07714 hypothetical protein; Provisional
Probab=22.93 E-value=2e+02 Score=20.44 Aligned_cols=43 Identities=5% Similarity=-0.064 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+.+++.++.+ +.+.+++-..-+ ++..+++.++|+.++++++.
T Consensus 23 ~~~v~~al~~g--~~~lViiA~D~s--------~~~~~ki~~~~~~~~vp~~~ 65 (100)
T PRK07714 23 EELVLKEVRSG--KAKLVLLSEDAS--------VNTTKKITDKCTYYNVPMRK 65 (100)
T ss_pred HHHHHHHHHhC--CceEEEEeCCCC--------HHHHHHHHHHHHhcCCCEEE
Confidence 46667777754 444444433221 12289999999999998764
No 498
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=22.86 E-value=85 Score=25.00 Aligned_cols=11 Identities=18% Similarity=0.151 Sum_probs=5.6
Q ss_pred CChHHHHHHHH
Q 017633 56 NSGTEACMGVL 66 (368)
Q Consensus 56 ~~gt~a~~~al 66 (368)
+...+.+...+
T Consensus 50 ~D~~~~I~~~l 60 (169)
T COG0521 50 PDDKEQIRATL 60 (169)
T ss_pred CCCHHHHHHHH
Confidence 34555555555
No 499
>cd07576 R-amidase_like Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric compl
Probab=22.84 E-value=1.3e+02 Score=25.36 Aligned_cols=54 Identities=17% Similarity=0.287 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCccc----------CCHHHHHHHHHHHHHhCCEEEEe
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIA----------PKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~----------~~~~~l~~i~~l~~~~~~~li~D 180 (368)
++.+++.+++.....+-+++-|-...+|-.. .+.++++.+.++++++++.+++=
T Consensus 18 ~~~i~~~i~~a~~~ga~lvv~PE~~l~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 81 (254)
T cd07576 18 LARLDEAAARAAAAGADLLVFPELFLTGYNIGDAVARLAEPADGPALQALRAIARRHGIAIVVG 81 (254)
T ss_pred HHHHHHHHHHHHHcCCCEEEccCccccCCCCcchhhhhhcccCChHHHHHHHHHHHcCCEEEEe
Confidence 5555555553212223344445544444211 12346899999999999988863
No 500
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=22.70 E-value=6.2e+02 Score=23.44 Aligned_cols=65 Identities=15% Similarity=0.077 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHH-HHHHHhcCCceEEEEcCCCCCCchhhhhhcCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVL-RLARAFTGRERIIKFEGCYHGHADPFLVKAGS 98 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al-~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 98 (368)
+..++..+.+.++-.+....... +|+.-....+ .....+.+.+..+++.++|.++......+.+.
T Consensus 57 ~~~~a~~~~~~~~g~g~~gsR~i-~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~ 122 (388)
T COG0156 57 ELIEAAKAAIRRYGVGAGGSRLI-SGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKK 122 (388)
T ss_pred HHHHHHHHHHHHhCCCCCCcCcc-cCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCC
Confidence 44566666666653233333434 3555555555 22334567889999999999886555444443
Done!