Query 017633
Match_columns 368
No_of_seqs 127 out of 1474
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 17:35:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017633.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017633hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ao9_A Beta-phenylalanine amin 100.0 8.7E-53 3E-57 385.5 35.2 347 4-367 98-445 (454)
2 3l44_A Glutamate-1-semialdehyd 100.0 7.6E-51 2.6E-55 377.7 35.7 364 4-367 66-429 (434)
3 4e77_A Glutamate-1-semialdehyd 100.0 9E-50 3.1E-54 369.9 38.7 365 4-368 64-429 (429)
4 3k28_A Glutamate-1-semialdehyd 100.0 2.1E-50 7.2E-55 374.1 33.9 364 4-368 64-427 (429)
5 4atq_A 4-aminobutyrate transam 100.0 1.7E-49 5.8E-54 365.5 38.9 355 4-367 75-454 (456)
6 3fq8_A Glutamate-1-semialdehyd 100.0 7.7E-50 2.6E-54 370.2 35.7 365 4-368 63-427 (427)
7 4e3q_A Pyruvate transaminase; 100.0 1.1E-49 3.8E-54 368.0 31.9 361 4-367 78-467 (473)
8 3oks_A 4-aminobutyrate transam 100.0 2.6E-46 8.9E-51 348.2 38.5 348 4-367 72-450 (451)
9 4ffc_A 4-aminobutyrate aminotr 100.0 3E-46 1E-50 347.8 38.0 346 4-367 75-448 (453)
10 3tfu_A Adenosylmethionine-8-am 100.0 4.8E-47 1.6E-51 353.0 32.1 345 4-368 86-453 (457)
11 3i5t_A Aminotransferase; pyrid 100.0 1.1E-46 3.7E-51 352.4 34.6 355 4-367 65-453 (476)
12 3n5m_A Adenosylmethionine-8-am 100.0 2.3E-46 8E-51 349.2 36.6 359 4-368 60-452 (452)
13 2epj_A Glutamate-1-semialdehyd 100.0 8.1E-47 2.8E-51 350.6 33.3 363 5-367 68-430 (434)
14 2e7u_A Glutamate-1-semialdehyd 100.0 2.4E-46 8.3E-51 346.4 33.0 360 5-365 64-424 (424)
15 3hmu_A Aminotransferase, class 100.0 2.3E-46 7.7E-51 349.7 32.7 353 4-367 66-451 (472)
16 3gju_A Putative aminotransfera 100.0 1.4E-45 4.8E-50 344.4 35.3 357 4-367 62-455 (460)
17 3dod_A Adenosylmethionine-8-am 100.0 9E-46 3.1E-50 344.7 31.9 360 4-367 55-442 (448)
18 4a6r_A Omega transaminase; tra 100.0 2.1E-45 7.1E-50 343.2 34.3 356 4-367 61-448 (459)
19 2yky_A Beta-transaminase; tran 100.0 1.1E-49 3.9E-54 367.5 0.0 347 4-367 111-459 (465)
20 3nx3_A Acoat, acetylornithine 100.0 1.4E-44 4.7E-49 331.7 32.4 338 4-368 47-395 (395)
21 3dxv_A Alpha-amino-epsilon-cap 100.0 9.9E-44 3.4E-48 330.4 34.4 348 4-367 54-424 (439)
22 3i4j_A Aminotransferase, class 100.0 9E-44 3.1E-48 329.8 32.9 352 4-367 40-427 (430)
23 1z7d_A Ornithine aminotransfer 100.0 1.7E-43 5.7E-48 327.6 32.8 339 4-367 76-428 (433)
24 2cy8_A D-phgat, D-phenylglycin 100.0 1E-43 3.5E-48 331.5 31.0 357 5-367 69-434 (453)
25 1zod_A DGD, 2,2-dialkylglycine 100.0 4.4E-43 1.5E-47 325.5 34.8 357 5-367 55-431 (433)
26 2oat_A Ornithine aminotransfer 100.0 6E-43 2.1E-47 324.3 33.1 339 4-368 87-439 (439)
27 2pb2_A Acetylornithine/succiny 100.0 1.7E-42 5.9E-47 319.8 32.6 338 5-367 69-417 (420)
28 2cjg_A L-lysine-epsilon aminot 100.0 1.5E-42 5.2E-47 322.6 31.4 340 4-367 65-447 (449)
29 4a0g_A Adenosylmethionine-8-am 100.0 2.5E-43 8.6E-48 345.9 23.9 359 4-368 391-828 (831)
30 3a8u_X Omega-amino acid--pyruv 100.0 1.8E-41 6.3E-46 316.0 33.2 352 5-368 62-447 (449)
31 4adb_A Succinylornithine trans 100.0 5.3E-41 1.8E-45 308.9 32.7 339 4-367 50-399 (406)
32 1s0a_A Adenosylmethionine-8-am 100.0 6.2E-41 2.1E-45 310.6 32.4 342 5-367 55-423 (429)
33 3ruy_A Ornithine aminotransfer 100.0 3E-40 1E-44 302.5 32.2 330 5-365 48-391 (392)
34 2eo5_A 419AA long hypothetical 100.0 2.6E-40 8.9E-45 305.3 31.6 330 5-368 54-418 (419)
35 1sff_A 4-aminobutyrate aminotr 100.0 3.8E-39 1.3E-43 298.5 36.5 348 5-367 53-423 (426)
36 1ohv_A 4-aminobutyrate aminotr 100.0 1.3E-39 4.4E-44 304.3 29.8 341 4-368 74-471 (472)
37 2ord_A Acoat, acetylornithine 100.0 1.5E-38 5.2E-43 291.7 31.8 335 5-368 52-397 (397)
38 1vef_A Acetylornithine/acetyl- 100.0 7.4E-38 2.5E-42 286.9 30.9 330 5-365 57-394 (395)
39 2eh6_A Acoat, acetylornithine 100.0 5.1E-36 1.7E-40 272.8 32.2 326 5-365 40-375 (375)
40 1yiz_A Kynurenine aminotransfe 100.0 3.9E-32 1.3E-36 251.6 26.9 343 6-367 48-428 (429)
41 3l8a_A METC, putative aminotra 100.0 3.7E-32 1.3E-36 251.0 24.8 328 7-367 72-421 (421)
42 3aow_A Putative uncharacterize 100.0 4.4E-32 1.5E-36 252.0 23.2 322 9-367 91-444 (448)
43 3b46_A Aminotransferase BNA3; 100.0 1.5E-31 5.2E-36 248.7 23.8 341 10-364 71-443 (447)
44 3euc_A Histidinol-phosphate am 100.0 2.1E-31 7.1E-36 241.7 23.5 312 10-366 44-366 (367)
45 3fdb_A Beta C-S lyase, putativ 100.0 1E-31 3.6E-36 244.5 19.4 319 9-368 36-376 (377)
46 1gd9_A Aspartate aminotransfer 100.0 2.3E-31 7.8E-36 243.3 21.6 324 10-367 40-385 (389)
47 2dou_A Probable N-succinyldiam 100.0 2.1E-31 7.2E-36 242.4 20.5 319 6-365 36-375 (376)
48 2w8t_A SPT, serine palmitoyltr 100.0 1.9E-30 6.4E-35 240.0 27.0 317 4-367 72-414 (427)
49 3op7_A Aminotransferase class 100.0 1.9E-31 6.6E-36 242.6 20.1 315 16-367 46-370 (375)
50 1u08_A Hypothetical aminotrans 100.0 1.2E-30 3.9E-35 238.4 24.5 318 10-363 44-385 (386)
51 1v2d_A Glutamine aminotransfer 100.0 8.1E-31 2.8E-35 239.0 23.1 316 10-367 39-370 (381)
52 3dzz_A Putative pyridoxal 5'-p 100.0 2.9E-30 1E-34 236.0 26.3 329 7-368 38-389 (391)
53 2z61_A Probable aspartate amin 100.0 7.4E-31 2.5E-35 238.3 21.8 307 6-366 40-369 (370)
54 3fvs_A Kynurenine--oxoglutarat 100.0 3.1E-30 1.1E-34 238.3 26.0 344 10-368 42-422 (422)
55 2zyj_A Alpha-aminodipate amino 100.0 2.9E-31 9.8E-36 243.3 18.7 323 6-367 44-392 (397)
56 3ele_A Amino transferase; RER0 100.0 9.9E-31 3.4E-35 239.8 22.0 316 8-367 47-395 (398)
57 1j32_A Aspartate aminotransfer 100.0 8.1E-31 2.8E-35 239.5 21.3 322 10-367 44-386 (388)
58 3dyd_A Tyrosine aminotransfera 100.0 1E-30 3.5E-35 241.7 22.1 327 9-367 71-423 (427)
59 3kax_A Aminotransferase, class 100.0 1.7E-30 5.7E-35 237.0 23.1 323 9-365 37-382 (383)
60 2o1b_A Aminotransferase, class 100.0 2.5E-31 8.5E-36 244.2 17.6 323 6-367 58-402 (404)
61 2zc0_A Alanine glyoxylate tran 100.0 1.1E-30 3.6E-35 240.3 21.4 323 7-367 47-403 (407)
62 3ly1_A Putative histidinol-pho 100.0 5.4E-30 1.9E-34 231.1 25.7 314 5-367 26-351 (354)
63 1vp4_A Aminotransferase, putat 100.0 3.1E-31 1.1E-35 245.1 17.3 325 7-367 56-417 (425)
64 4dq6_A Putative pyridoxal phos 100.0 4.5E-30 1.5E-34 234.8 24.7 324 8-366 44-391 (391)
65 1o4s_A Aspartate aminotransfer 100.0 2.4E-30 8.2E-35 236.5 22.2 318 7-367 53-388 (389)
66 3jtx_A Aminotransferase; NP_28 100.0 3.2E-30 1.1E-34 236.2 22.8 316 10-365 44-395 (396)
67 3h14_A Aminotransferase, class 100.0 1.3E-30 4.5E-35 238.4 20.0 318 10-367 45-381 (391)
68 2o0r_A RV0858C (N-succinyldiam 100.0 1.4E-30 4.6E-35 239.9 19.9 320 10-367 39-395 (411)
69 1b5p_A Protein (aspartate amin 100.0 2.8E-30 9.6E-35 235.7 21.3 320 10-367 45-384 (385)
70 3ftb_A Histidinol-phosphate am 100.0 5E-30 1.7E-34 232.0 22.7 311 5-367 36-360 (361)
71 2x5d_A Probable aminotransfera 100.0 1.2E-30 4.2E-35 240.2 19.0 325 6-367 48-397 (412)
72 3tqx_A 2-amino-3-ketobutyrate 100.0 1.1E-29 3.9E-34 232.7 25.2 319 3-368 50-396 (399)
73 3ffh_A Histidinol-phosphate am 100.0 1E-29 3.5E-34 230.1 24.6 309 6-365 43-363 (363)
74 3ezs_A Aminotransferase ASPB; 100.0 1.7E-30 5.7E-35 236.5 19.4 316 5-367 33-374 (376)
75 3nra_A Aspartate aminotransfer 100.0 1.8E-30 6E-35 238.8 18.5 321 10-367 54-404 (407)
76 3g0t_A Putative aminotransfera 100.0 7.9E-30 2.7E-34 236.6 22.8 324 10-367 58-436 (437)
77 3e2y_A Kynurenine-oxoglutarate 100.0 2E-29 6.8E-34 232.0 24.1 337 10-363 37-408 (410)
78 1c7n_A Cystalysin; transferase 100.0 1.9E-29 6.4E-34 231.4 23.5 322 10-367 45-392 (399)
79 3cq5_A Histidinol-phosphate am 100.0 5.1E-29 1.7E-33 226.1 25.7 311 6-366 41-366 (369)
80 1d2f_A MALY protein; aminotran 100.0 2E-29 6.9E-34 230.5 23.1 325 7-367 40-388 (390)
81 1lc5_A COBD, L-threonine-O-3-p 100.0 1.2E-29 4.2E-34 229.7 20.4 313 5-367 34-359 (364)
82 2x5f_A Aspartate_tyrosine_phen 100.0 1.9E-30 6.6E-35 240.3 15.2 327 11-367 63-428 (430)
83 3hdo_A Histidinol-phosphate am 100.0 1.6E-29 5.4E-34 228.6 20.6 305 10-366 40-353 (360)
84 3get_A Histidinol-phosphate am 100.0 3.7E-29 1.3E-33 226.7 22.9 312 5-365 40-364 (365)
85 2r2n_A Kynurenine/alpha-aminoa 100.0 4.6E-29 1.6E-33 230.6 23.1 298 33-367 82-423 (425)
86 1xi9_A Putative transaminase; 100.0 8.9E-30 3E-34 234.0 18.2 323 10-368 55-403 (406)
87 3piu_A 1-aminocyclopropane-1-c 100.0 2.4E-29 8.1E-34 233.3 20.0 308 33-367 86-431 (435)
88 3kki_A CAI-1 autoinducer synth 100.0 1.1E-28 3.7E-33 227.1 23.5 313 3-367 66-403 (409)
89 3qgu_A LL-diaminopimelate amin 100.0 2.9E-29 1E-33 233.6 19.9 322 10-367 83-439 (449)
90 1fc4_A 2-amino-3-ketobutyrate 100.0 2.5E-28 8.7E-33 224.0 25.8 318 3-368 52-397 (401)
91 1iay_A ACC synthase 2, 1-amino 100.0 1E-28 3.6E-33 228.5 22.7 302 35-367 85-426 (428)
92 3ei9_A LL-diaminopimelate amin 100.0 1.4E-28 4.6E-33 228.0 22.6 323 9-365 69-425 (432)
93 3a2b_A Serine palmitoyltransfe 100.0 6.6E-28 2.2E-32 221.0 26.7 314 6-368 53-392 (398)
94 1bw0_A TAT, protein (tyrosine 100.0 1.5E-29 5E-34 233.3 15.6 330 10-367 51-412 (416)
95 1ajs_A Aspartate aminotransfer 100.0 5.4E-29 1.8E-33 229.3 19.2 318 11-368 50-411 (412)
96 3ez1_A Aminotransferase MOCR f 100.0 1.8E-29 6.2E-34 233.2 15.8 303 31-367 68-414 (423)
97 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.3E-28 4.5E-33 223.5 21.0 317 6-368 17-370 (371)
98 3if2_A Aminotransferase; YP_26 100.0 3.3E-29 1.1E-33 232.9 16.2 304 32-367 82-439 (444)
99 3rq1_A Aminotransferase class 100.0 4.2E-29 1.4E-33 230.5 16.6 319 12-368 59-415 (418)
100 3g7q_A Valine-pyruvate aminotr 100.0 6.1E-29 2.1E-33 229.3 17.3 328 3-367 32-412 (417)
101 2gb3_A Aspartate aminotransfer 100.0 7.8E-29 2.7E-33 227.9 18.0 313 10-367 57-401 (409)
102 1fg7_A Histidinol phosphate am 100.0 1.3E-28 4.5E-33 222.2 18.8 289 30-364 55-354 (356)
103 4f4e_A Aromatic-amino-acid ami 100.0 2.5E-29 8.6E-34 232.0 14.2 318 12-365 70-419 (420)
104 1bs0_A Protein (8-amino-7-oxon 100.0 4E-27 1.4E-31 214.7 28.4 309 7-364 50-383 (384)
105 3fsl_A Aromatic-amino-acid ami 100.0 4E-29 1.4E-33 229.0 14.0 318 12-365 47-397 (397)
106 2q7w_A Aspartate aminotransfer 100.0 4.8E-29 1.6E-33 228.4 14.1 318 9-365 44-396 (396)
107 3asa_A LL-diaminopimelate amin 100.0 3.9E-28 1.3E-32 222.6 20.0 313 10-367 47-392 (400)
108 3d6k_A Putative aminotransfera 100.0 6.7E-29 2.3E-33 229.3 14.6 300 32-367 75-417 (422)
109 2bwn_A 5-aminolevulinate synth 100.0 5.9E-27 2E-31 214.9 26.9 314 6-367 56-399 (401)
110 3p1t_A Putative histidinol-pho 100.0 3.6E-27 1.2E-31 211.2 24.9 302 5-366 26-335 (337)
111 2ay1_A Aroat, aromatic amino a 100.0 4.4E-29 1.5E-33 228.5 12.2 320 9-364 44-392 (394)
112 2dr1_A PH1308 protein, 386AA l 100.0 1.8E-27 6.1E-32 217.1 22.8 318 8-367 29-378 (386)
113 3ppl_A Aspartate aminotransfer 100.0 4.8E-28 1.6E-32 224.0 18.5 302 31-367 76-419 (427)
114 3f9t_A TDC, L-tyrosine decarbo 100.0 4.5E-27 1.5E-31 215.1 24.7 315 10-366 42-396 (397)
115 1elu_A L-cysteine/L-cystine C- 100.0 4.9E-28 1.7E-32 221.2 18.0 322 6-364 24-388 (390)
116 3t18_A Aminotransferase class 100.0 5.7E-28 2E-32 222.5 16.8 315 12-367 58-409 (413)
117 2z9v_A Aspartate aminotransfer 100.0 4.9E-27 1.7E-31 214.7 22.7 319 7-367 17-370 (392)
118 1yaa_A Aspartate aminotransfer 100.0 1.8E-27 6.2E-32 219.1 18.7 319 10-367 48-410 (412)
119 3isl_A Purine catabolism prote 100.0 2.3E-26 8E-31 211.8 26.0 324 3-367 11-389 (416)
120 1kmj_A Selenocysteine lyase; p 100.0 5.8E-26 2E-30 208.5 28.4 316 8-367 33-404 (406)
121 1eg5_A Aminotransferase; PLP-d 100.0 4E-26 1.4E-30 207.9 27.0 317 7-368 10-376 (384)
122 3kgw_A Alanine-glyoxylate amin 100.0 2E-27 6.7E-32 217.3 18.3 315 10-368 34-388 (393)
123 3b1d_A Betac-S lyase; HET: PLP 99.9 3.5E-30 1.2E-34 235.7 0.0 320 10-366 45-391 (392)
124 3f0h_A Aminotransferase; RER07 100.0 1.3E-26 4.4E-31 210.8 23.1 315 11-367 31-373 (376)
125 1t3i_A Probable cysteine desul 100.0 9.2E-26 3.1E-30 208.1 28.7 318 8-367 38-412 (420)
126 1m32_A 2-aminoethylphosphonate 100.0 1.8E-26 6E-31 208.9 23.0 315 10-368 15-365 (366)
127 3zrp_A Serine-pyruvate aminotr 99.9 6E-27 2.1E-31 213.4 19.8 314 10-367 13-362 (384)
128 3fkd_A L-threonine-O-3-phospha 99.9 2.1E-26 7.2E-31 207.3 22.6 302 5-367 25-341 (350)
129 1uu1_A Histidinol-phosphate am 99.9 4.7E-27 1.6E-31 210.3 17.4 294 10-364 33-334 (335)
130 3meb_A Aspartate aminotransfer 99.9 3.5E-27 1.2E-31 219.2 17.1 299 30-367 91-443 (448)
131 3cai_A Possible aminotransfera 99.9 2.2E-25 7.7E-30 204.7 29.0 317 9-364 37-405 (406)
132 1vjo_A Alanine--glyoxylate ami 99.9 1.2E-26 4E-31 212.3 20.3 314 8-366 43-393 (393)
133 1qz9_A Kynureninase; kynurenin 99.9 1.3E-25 4.5E-30 206.9 27.4 319 6-367 36-401 (416)
134 3f6t_A Aspartate aminotransfer 99.9 1.1E-26 3.6E-31 220.0 20.1 342 6-367 112-524 (533)
135 3k7y_A Aspartate aminotransfer 99.9 1.1E-27 3.7E-32 218.6 12.8 316 12-368 50-405 (405)
136 3nnk_A Ureidoglycine-glyoxylat 99.9 5.9E-26 2E-30 208.8 24.0 314 10-367 24-389 (411)
137 3tcm_A Alanine aminotransferas 99.9 2.7E-26 9.3E-31 215.8 20.0 334 10-367 107-493 (500)
138 4eu1_A Mitochondrial aspartate 99.9 6.6E-27 2.2E-31 215.1 13.0 318 10-365 56-408 (409)
139 2yrr_A Aminotransferase, class 99.9 5.3E-26 1.8E-30 204.7 18.2 312 10-367 11-352 (353)
140 1iug_A Putative aspartate amin 99.9 7.9E-26 2.7E-30 203.6 19.4 311 10-367 12-347 (352)
141 2huf_A Alanine glyoxylate amin 99.9 1.7E-25 5.7E-30 204.6 20.0 315 10-367 30-382 (393)
142 3lvm_A Cysteine desulfurase; s 99.9 4.9E-25 1.7E-29 203.5 22.9 315 8-367 32-398 (423)
143 7aat_A Aspartate aminotransfer 99.9 9.8E-26 3.4E-30 206.7 17.9 314 13-365 50-400 (401)
144 1svv_A Threonine aldolase; str 99.9 4.2E-25 1.4E-29 199.4 21.1 317 5-367 21-357 (359)
145 4eb5_A Probable cysteine desul 99.9 2.5E-24 8.6E-29 196.0 26.0 320 7-367 9-372 (382)
146 3ihj_A Alanine aminotransferas 99.9 3.7E-25 1.3E-29 207.8 19.4 330 11-367 103-492 (498)
147 1v72_A Aldolase; PLP-dependent 99.9 1.4E-24 4.6E-29 195.8 22.3 315 6-367 16-352 (356)
148 4hvk_A Probable cysteine desul 99.9 2.7E-24 9.2E-29 195.6 24.1 317 7-367 9-372 (382)
149 3e9k_A Kynureninase; kynurenin 99.9 4E-25 1.4E-29 206.6 18.9 328 5-367 74-460 (465)
150 2ch1_A 3-hydroxykynurenine tra 99.9 1.2E-24 4.1E-29 199.1 21.0 313 10-367 29-382 (396)
151 2bkw_A Alanine-glyoxylate amin 99.9 1.9E-24 6.6E-29 196.9 21.6 323 5-368 7-384 (385)
152 2zy4_A L-aspartate beta-decarb 99.9 5E-25 1.7E-29 208.6 17.2 341 6-367 113-521 (546)
153 4h51_A Aspartate aminotransfer 99.9 2.2E-24 7.4E-29 196.9 18.3 321 12-368 65-417 (420)
154 1jg8_A L-ALLO-threonine aldola 99.9 3.7E-24 1.3E-28 192.4 19.3 316 10-367 16-345 (347)
155 2dkj_A Serine hydroxymethyltra 99.9 9.2E-24 3.1E-28 193.9 22.0 313 11-367 36-387 (407)
156 2rfv_A Methionine gamma-lyase; 99.9 8E-24 2.7E-28 193.7 20.0 285 31-364 62-396 (398)
157 3ke3_A Putative serine-pyruvat 99.9 3.8E-24 1.3E-28 194.6 17.6 300 33-367 35-375 (379)
158 1b9h_A AHBA synthase, protein 99.9 4.8E-23 1.6E-27 188.0 24.3 311 12-367 17-387 (388)
159 3vax_A Putative uncharacterize 99.9 1.9E-24 6.4E-29 198.1 14.6 314 8-367 30-399 (400)
160 3mad_A Sphingosine-1-phosphate 99.9 2.9E-23 9.8E-28 196.3 23.0 318 10-367 108-468 (514)
161 3lws_A Aromatic amino acid bet 99.9 3.6E-24 1.2E-28 193.2 16.0 321 4-365 12-356 (357)
162 2oga_A Transaminase; PLP-depen 99.9 2E-23 6.7E-28 191.2 21.0 305 12-368 44-396 (399)
163 3pj0_A LMO0305 protein; struct 99.9 1.8E-24 6.2E-29 195.3 13.8 312 11-365 28-359 (359)
164 1mdo_A ARNB aminotransferase; 99.9 2.4E-23 8.2E-28 190.3 20.5 307 10-367 18-385 (393)
165 3ndn_A O-succinylhomoserine su 99.9 6.3E-24 2.2E-28 194.6 16.4 290 30-365 78-413 (414)
166 3qhx_A Cystathionine gamma-syn 99.9 8.1E-23 2.8E-27 186.4 22.5 284 30-365 63-391 (392)
167 3n0l_A Serine hydroxymethyltra 99.9 1.8E-22 6.2E-27 185.9 24.8 313 10-367 37-388 (417)
168 1e5e_A MGL, methionine gamma-l 99.9 1.6E-23 5.6E-28 191.7 17.4 211 32-280 61-280 (404)
169 3mc6_A Sphingosine-1-phosphate 99.9 7.3E-23 2.5E-27 192.8 21.9 321 9-367 75-436 (497)
170 1o69_A Aminotransferase; struc 99.9 1.4E-22 4.7E-27 185.3 23.0 323 11-366 11-385 (394)
171 1ax4_A Tryptophanase; tryptoph 99.9 2.9E-23 9.8E-28 194.1 18.9 338 12-367 55-440 (467)
172 3ecd_A Serine hydroxymethyltra 99.9 3.6E-22 1.2E-26 184.4 25.7 316 10-367 44-396 (425)
173 2vi8_A Serine hydroxymethyltra 99.9 9.1E-23 3.1E-27 187.2 21.6 312 11-367 36-386 (405)
174 1wyu_B Glycine dehydrogenase s 99.9 2E-22 6.8E-27 188.4 24.2 315 8-366 76-439 (474)
175 3dr4_A Putative perosamine syn 99.9 4E-23 1.4E-27 188.7 18.6 314 2-365 22-390 (391)
176 3nyt_A Aminotransferase WBPE; 99.9 1.7E-23 5.8E-28 189.5 15.7 308 4-363 4-359 (367)
177 2aeu_A Hypothetical protein MJ 99.9 1.9E-23 6.6E-28 189.4 15.3 305 10-367 42-370 (374)
178 1cs1_A CGS, protein (cystathio 99.9 4.3E-22 1.5E-26 181.5 24.2 254 30-337 49-324 (386)
179 1ibj_A CBL, cystathionine beta 99.9 2.4E-23 8E-28 193.2 15.4 287 31-367 131-461 (464)
180 2fnu_A Aminotransferase; prote 99.9 3.9E-22 1.3E-26 181.0 22.7 314 5-367 4-371 (375)
181 3acz_A Methionine gamma-lyase; 99.9 2.8E-22 9.7E-27 182.7 21.6 284 30-368 56-389 (389)
182 3uwc_A Nucleotide-sugar aminot 99.9 1E-23 3.4E-28 191.5 11.6 305 14-367 21-370 (374)
183 2po3_A 4-dehydrase; external a 99.9 1.3E-21 4.4E-26 180.6 25.9 307 10-367 30-385 (424)
184 3frk_A QDTB; aminotransferase, 99.9 8.6E-24 3E-28 191.9 11.0 312 5-366 6-366 (373)
185 3ffr_A Phosphoserine aminotran 99.9 1.9E-22 6.5E-27 182.1 19.7 304 10-365 15-361 (362)
186 3a9z_A Selenocysteine lyase; P 99.9 1.2E-21 4.3E-26 181.2 25.4 321 9-367 29-427 (432)
187 3h7f_A Serine hydroxymethyltra 99.9 1.2E-21 4.2E-26 181.8 25.1 317 10-367 57-413 (447)
188 1gc0_A Methionine gamma-lyase; 99.9 9.9E-22 3.4E-26 179.8 22.7 217 30-280 62-282 (398)
189 2ez2_A Beta-tyrosinase, tyrosi 99.9 4.3E-22 1.5E-26 185.6 20.5 328 11-367 57-430 (456)
190 3gbx_A Serine hydroxymethyltra 99.9 8.7E-22 3E-26 181.5 21.6 311 10-367 42-395 (420)
191 2oqx_A Tryptophanase; lyase, p 99.9 2.1E-22 7.3E-27 188.2 17.6 332 12-367 53-441 (467)
192 3nmy_A Xometc, cystathionine g 99.9 2E-22 6.9E-27 183.8 16.6 287 30-366 64-397 (400)
193 1pff_A Methionine gamma-lyase; 99.9 5.4E-22 1.8E-26 177.1 16.8 275 37-364 2-330 (331)
194 2cb1_A O-acetyl homoserine sul 99.9 9.2E-21 3.1E-25 174.1 25.0 186 5-222 28-217 (412)
195 1qgn_A Protein (cystathionine 99.9 3.2E-21 1.1E-25 177.6 21.8 286 31-368 112-445 (445)
196 2qma_A Diaminobutyrate-pyruvat 99.9 5.8E-20 2E-24 172.9 27.5 329 10-368 112-496 (497)
197 1n8p_A Cystathionine gamma-lya 99.9 6.3E-21 2.2E-25 173.9 20.1 214 30-280 52-273 (393)
198 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.7E-21 2.6E-25 176.0 20.7 315 4-366 33-434 (437)
199 3cog_A Cystathionine gamma-lya 99.9 7.8E-22 2.7E-26 180.4 12.7 214 30-280 64-283 (403)
200 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.2E-20 4.3E-25 172.1 20.2 303 10-361 13-389 (390)
201 2c81_A Glutamine-2-deoxy-scyll 99.9 6.5E-20 2.2E-24 168.9 24.0 191 10-230 14-214 (418)
202 2x3l_A ORN/Lys/Arg decarboxyla 99.9 9.5E-22 3.2E-26 182.2 11.7 287 31-367 55-352 (446)
203 3bwn_A AT1G70560, L-tryptophan 99.9 1.8E-21 6E-26 177.6 13.3 272 36-366 71-385 (391)
204 3ju7_A Putative PLP-dependent 99.9 3.4E-20 1.2E-24 168.0 21.6 315 10-367 14-374 (377)
205 2c0r_A PSAT, phosphoserine ami 99.9 1.3E-20 4.4E-25 170.2 18.9 310 10-367 15-360 (362)
206 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.6E-20 1.2E-24 172.3 20.5 292 34-365 134-455 (456)
207 2dgk_A GAD-beta, GADB, glutama 99.9 2E-19 6.8E-24 167.2 25.1 323 10-367 54-433 (452)
208 1w23_A Phosphoserine aminotran 99.9 3.7E-21 1.3E-25 173.6 13.0 312 10-367 14-359 (360)
209 3ri6_A O-acetylhomoserine sulf 99.9 2.8E-20 9.5E-25 170.8 18.8 287 30-366 79-430 (430)
210 2ctz_A O-acetyl-L-homoserine s 99.8 2.9E-20 9.8E-25 171.2 18.7 159 30-222 55-221 (421)
211 1rv3_A Serine hydroxymethyltra 99.8 2.8E-20 9.7E-25 174.0 18.7 311 9-366 55-429 (483)
212 3ht4_A Aluminum resistance pro 99.8 4.5E-20 1.5E-24 169.5 19.3 289 10-331 36-344 (431)
213 2a7v_A Serine hydroxymethyltra 99.8 1.8E-19 6.3E-24 167.1 23.1 313 10-366 66-439 (490)
214 2okj_A Glutamate decarboxylase 99.8 1.5E-18 5.1E-23 163.5 29.6 313 34-368 133-502 (504)
215 3jzl_A Putative cystathionine 99.8 6.7E-19 2.3E-23 160.3 24.2 281 10-332 30-339 (409)
216 2jis_A Cysteine sulfinic acid 99.8 1.8E-18 6.1E-23 163.3 27.9 311 33-368 148-515 (515)
217 3hbx_A GAD 1, glutamate decarb 99.8 5E-19 1.7E-23 166.3 21.9 323 9-367 67-443 (502)
218 2hox_A ALLIIN lyase 1; cystein 99.8 2E-20 7E-25 172.3 12.1 300 12-366 72-423 (427)
219 2fq6_A Cystathionine beta-lyas 99.8 1E-19 3.5E-24 166.5 16.0 218 30-281 79-300 (415)
220 3hvy_A Cystathionine beta-lyas 99.8 9.8E-19 3.3E-23 159.7 21.4 282 11-331 46-355 (427)
221 3i16_A Aluminum resistance pro 99.8 2.8E-18 9.7E-23 156.7 23.2 280 12-331 46-355 (427)
222 4e1o_A HDC, histidine decarbox 99.8 3.7E-17 1.3E-21 152.9 28.9 299 33-367 118-477 (481)
223 1js3_A DDC;, DOPA decarboxylas 99.8 1.3E-17 4.3E-22 156.6 25.3 318 14-367 90-473 (486)
224 2fyf_A PSAT, phosphoserine ami 99.8 6.3E-19 2.1E-23 161.2 16.0 304 10-368 51-398 (398)
225 3k40_A Aromatic-L-amino-acid d 99.8 1.1E-17 3.9E-22 155.9 24.1 301 33-367 113-470 (475)
226 3vp6_A Glutamate decarboxylase 99.8 1.4E-16 4.9E-21 149.8 30.5 311 33-367 135-504 (511)
227 3e77_A Phosphoserine aminotran 99.7 6.3E-17 2.2E-21 145.1 15.8 319 8-367 22-374 (377)
228 1c4k_A Protein (ornithine deca 99.7 1.2E-16 4.2E-21 154.7 17.5 315 30-366 170-564 (730)
229 2vyc_A Biodegradative arginine 99.7 1.1E-16 3.9E-21 156.3 16.3 315 31-366 203-603 (755)
230 1wyu_A Glycine dehydrogenase ( 99.7 4E-16 1.4E-20 144.3 17.6 284 33-365 108-437 (438)
231 3n75_A LDC, lysine decarboxyla 99.7 6.6E-16 2.3E-20 148.4 15.2 313 30-365 192-557 (715)
232 3qm2_A Phosphoserine aminotran 99.7 1.5E-16 5.3E-21 143.4 8.9 312 10-367 38-384 (386)
233 3m5u_A Phosphoserine aminotran 99.6 1.2E-14 4.1E-19 129.9 18.1 306 10-367 16-359 (361)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 4.5E-14 1.6E-18 126.5 20.8 290 48-367 133-460 (501)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 9.6E-14 3.3E-18 126.0 21.4 231 34-287 99-343 (450)
236 3ou5_A Serine hydroxymethyltra 99.3 1.5E-10 5E-15 103.5 18.4 310 10-365 66-438 (490)
237 1vhx_A Putative holliday junct 62.6 14 0.00047 27.8 5.2 59 126-186 43-103 (150)
238 3bzy_B ESCU; auto cleavage pro 53.9 8 0.00027 25.7 2.3 22 163-184 29-50 (83)
239 1tks_A 3,4-dihydroxy-2-butanon 50.4 17 0.00057 28.7 4.0 37 139-179 158-194 (204)
240 3t7y_A YOP proteins translocat 47.2 12 0.00039 25.7 2.3 22 163-184 44-65 (97)
241 2vt1_B Surface presentation of 46.5 12 0.00042 25.4 2.3 22 163-184 29-50 (93)
242 3c01_E Surface presentation of 45.6 13 0.00043 25.6 2.3 22 163-184 29-50 (98)
243 1x7f_A Outer surface protein; 44.7 46 0.0016 29.2 6.3 59 161-227 74-133 (385)
244 3mio_A DHBP synthase, 3,4-dihy 42.5 34 0.0012 27.0 4.6 36 140-179 158-194 (206)
245 3jva_A Dipeptide epimerase; en 41.3 1.7E+02 0.0059 25.2 9.8 143 11-180 140-291 (354)
246 1snn_A DHBP synthase, 3,4-dihy 40.4 35 0.0012 27.4 4.5 36 139-179 177-212 (227)
247 3tj4_A Mandelate racemase; eno 37.9 2E+02 0.0067 25.0 9.5 143 10-179 151-304 (372)
248 3q45_A Mandelate racemase/muco 36.8 1.5E+02 0.0051 25.8 8.5 47 126-180 246-292 (368)
249 3r0u_A Enzyme of enolase super 36.0 1.8E+02 0.0063 25.3 9.0 147 8-180 139-296 (379)
250 2p0o_A Hypothetical protein DU 35.7 36 0.0012 29.8 4.1 59 161-227 50-109 (372)
251 4a35_A Mitochondrial enolase s 34.5 1.3E+02 0.0043 27.1 7.8 46 126-179 310-355 (441)
252 1g57_A DHBP synthase, 3,4-dihy 34.1 52 0.0018 26.3 4.5 35 140-179 167-201 (217)
253 3v7e_A Ribosome-associated pro 33.7 92 0.0032 20.2 5.1 47 127-183 16-62 (82)
254 3ddm_A Putative mandelate race 33.6 1.6E+02 0.0055 25.8 8.3 46 126-179 262-307 (392)
255 3ozy_A Putative mandelate race 33.5 1.7E+02 0.006 25.6 8.5 47 126-180 258-304 (389)
256 3b1s_B Flagellar biosynthetic 39.6 8.9 0.00031 25.7 0.0 22 163-184 29-50 (87)
257 4gqr_A Pancreatic alpha-amylas 32.0 34 0.0011 31.0 3.7 26 160-185 76-101 (496)
258 2jli_A YSCU, YOP proteins tran 31.8 27 0.00093 25.1 2.3 22 163-184 73-94 (123)
259 3pzt_A Endoglucanase; alpha/be 31.6 34 0.0011 29.4 3.4 52 126-180 70-124 (327)
260 7a3h_A Endoglucanase; hydrolas 30.7 36 0.0012 28.7 3.4 52 126-180 45-99 (303)
261 3bzs_A ESCU; auto cleavage pro 30.4 29 0.00099 25.5 2.3 22 163-184 83-104 (137)
262 3o63_A Probable thiamine-phosp 29.9 40 0.0014 27.5 3.4 98 127-230 46-153 (243)
263 1tvn_A Cellulase, endoglucanas 28.9 41 0.0014 28.1 3.4 54 126-180 40-98 (293)
264 1iv0_A Hypothetical protein; r 28.8 67 0.0023 21.9 3.9 57 126-184 39-96 (98)
265 4hpn_A Putative uncharacterize 28.4 94 0.0032 27.1 5.8 45 126-178 250-294 (378)
266 2jlj_A YSCU, YOP proteins tran 28.4 33 0.0011 25.4 2.3 22 163-184 82-103 (144)
267 1bqc_A Protein (beta-mannanase 28.3 46 0.0016 27.9 3.7 22 159-180 63-84 (302)
268 1vjz_A Endoglucanase; TM1752, 28.3 1.2E+02 0.0042 25.7 6.5 57 126-182 38-98 (341)
269 3jug_A Beta-mannanase; TIM-bar 28.0 76 0.0026 27.4 5.0 22 159-180 85-106 (345)
270 1k4i_A 3,4-dihydroxy-2-butanon 27.3 64 0.0022 26.0 4.0 37 139-179 166-212 (233)
271 3n9k_A Glucan 1,3-beta-glucosi 27.3 44 0.0015 29.7 3.4 21 160-180 112-132 (399)
272 3vup_A Beta-1,4-mannanase; TIM 26.9 45 0.0015 28.1 3.4 19 163-181 92-110 (351)
273 2aif_A Ribosomal protein L7A; 26.7 1.8E+02 0.0062 21.0 6.2 44 127-179 46-89 (135)
274 1egz_A Endoglucanase Z, EGZ, C 26.5 47 0.0016 27.7 3.4 53 126-180 40-96 (291)
275 3p8k_A Hydrolase, carbon-nitro 26.1 87 0.003 26.0 5.0 54 126-179 38-100 (281)
276 1k7c_A Rhamnogalacturonan acet 26.0 1.9E+02 0.0065 22.9 6.9 38 141-178 126-167 (233)
277 4hty_A Cellulase; (alpha/beta) 25.7 49 0.0017 28.7 3.4 20 161-180 121-140 (359)
278 4e4u_A Mandalate racemase/muco 25.1 2.8E+02 0.0095 24.5 8.3 46 126-179 263-308 (412)
279 2whl_A Beta-mannanase, baman5; 25.1 48 0.0016 27.7 3.2 22 159-180 62-83 (294)
280 1g01_A Endoglucanase; alpha/be 25.0 51 0.0017 28.7 3.4 52 126-180 55-109 (364)
281 1g94_A Alpha-amylase; beta-alp 24.8 50 0.0017 29.7 3.4 25 160-184 64-88 (448)
282 2lbw_A H/ACA ribonucleoprotein 24.8 1.5E+02 0.0052 20.9 5.4 45 127-180 25-69 (121)
283 1ht6_A AMY1, alpha-amylase iso 24.6 57 0.0019 28.9 3.7 26 160-185 68-93 (405)
284 3bh4_A Alpha-amylase; calcium, 24.6 55 0.0019 29.7 3.7 25 160-184 78-102 (483)
285 1mxg_A Alpha amylase; hyperthe 24.6 56 0.0019 29.3 3.7 25 160-184 86-110 (435)
286 3i4k_A Muconate lactonizing en 24.5 3.4E+02 0.012 23.6 8.7 46 126-179 256-301 (383)
287 1lwj_A 4-alpha-glucanotransfer 24.3 57 0.0019 29.2 3.7 24 160-183 69-92 (441)
288 1ud2_A Amylase, alpha-amylase; 24.2 57 0.0019 29.6 3.7 25 160-184 80-104 (480)
289 1h4p_A Glucan 1,3-beta-glucosi 24.2 53 0.0018 29.2 3.4 23 159-181 112-134 (408)
290 1hvx_A Alpha-amylase; hydrolas 24.1 57 0.0019 30.0 3.7 25 160-184 81-105 (515)
291 1qnr_A Endo-1,4-B-D-mannanase; 24.0 54 0.0019 28.0 3.4 22 160-181 89-110 (344)
292 3b0z_B Flagellar biosynthetic 29.7 16 0.00056 25.8 0.0 22 163-184 29-50 (114)
293 2cks_A Endoglucanase E-5; carb 23.9 47 0.0016 28.0 2.9 52 126-180 44-99 (306)
294 1wpc_A Glucan 1,4-alpha-maltoh 23.6 59 0.002 29.6 3.7 25 160-184 82-106 (485)
295 1qwg_A PSL synthase;, (2R)-pho 23.2 65 0.0022 26.4 3.4 54 126-183 24-77 (251)
296 1nu0_A Hypothetical protein YQ 23.2 1.1E+02 0.0038 22.3 4.4 57 126-184 41-99 (138)
297 2dt9_A Aspartokinase; protein- 23.0 2.4E+02 0.0081 21.0 6.7 46 320-365 111-156 (167)
298 3cpq_A 50S ribosomal protein L 23.0 1.3E+02 0.0043 20.9 4.5 43 127-179 26-68 (110)
299 4e17_B Catenin alpha-1; four h 22.9 1E+02 0.0035 17.0 3.0 25 261-285 11-35 (40)
300 1h1n_A Endo type cellulase ENG 22.7 62 0.0021 27.2 3.4 20 161-180 72-91 (305)
301 3qr3_A Endoglucanase EG-II; TI 22.5 63 0.0021 27.9 3.4 56 127-182 45-105 (340)
302 2z1k_A (NEO)pullulanase; hydro 22.4 65 0.0022 29.2 3.7 24 160-183 96-119 (475)
303 2guy_A Alpha-amylase A; (beta- 22.1 66 0.0023 29.2 3.7 26 160-185 97-122 (478)
304 3dhu_A Alpha-amylase; structur 21.5 70 0.0024 28.7 3.7 24 160-183 83-106 (449)
305 2c0h_A Mannan endo-1,4-beta-ma 21.2 67 0.0023 27.5 3.4 20 162-181 92-111 (353)
306 1ceo_A Cellulase CELC; glycosy 21.2 67 0.0023 27.4 3.4 57 127-183 31-91 (343)
307 1gcy_A Glucan 1,4-alpha-maltot 21.1 71 0.0024 29.5 3.7 27 160-186 92-118 (527)
308 3l55_A B-1,4-endoglucanase/cel 21.1 68 0.0023 27.8 3.4 23 161-183 91-113 (353)
309 3b4u_A Dihydrodipicolinate syn 21.0 2.6E+02 0.0088 23.3 6.9 54 33-87 56-111 (294)
310 1wza_A Alpha-amylase A; hydrol 21.0 72 0.0025 29.0 3.7 24 160-183 81-104 (488)
311 1ece_A Endocellulase E1; glyco 20.8 69 0.0024 27.5 3.4 23 160-182 94-116 (358)
312 2ki0_A DS119; beta-alpha-beta, 20.6 77 0.0026 16.1 2.1 18 160-177 14-31 (36)
313 4dwd_A Mandelate racemase/muco 20.3 3.7E+02 0.013 23.5 8.1 46 126-180 253-298 (393)
314 3fv9_G Mandelate racemase/muco 20.3 2.8E+02 0.0095 24.2 7.2 47 126-180 254-300 (386)
No 1
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=8.7e-53 Score=385.46 Aligned_cols=347 Identities=34% Similarity=0.519 Sum_probs=306.5
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|+|++++.++++++..++.++....++++.+++.+++.+.++|++||++|++.|+++++.++++++||.+.+
T Consensus 98 ~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~ 177 (454)
T 4ao9_A 98 AGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSG 177 (454)
T ss_dssp TTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred hhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeC
Confidence 56899999999999999999887777788899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||.+.......+. . ....+...+|++|++.+++.+.++.+++++|++||+.+++|.+.++++|+
T Consensus 178 ~yHG~t~~~~~~~~~----------~----~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL 243 (454)
T 4ao9_A 178 GYHGGVLGFGARPSP----------T----TVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFL 243 (454)
T ss_dssp CBCSTTCBBSSSBCT----------T----SCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHH
T ss_pred CcCCccccccccccC----------c----cCCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhH
Confidence 999987654332221 1 11234566788999999999998777899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC-CCCccccccCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP-AGPMYQAGTLS 242 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~-~~~~~~~~t~~ 242 (368)
++|+++|++||++||+||+++| |.|..++.+++++.||+++++|++++|+++|.+.+++++++.+.. .+...+++||+
T Consensus 244 ~~lr~lc~~~g~lLI~DEV~tG-R~G~~~a~e~~gv~PDi~t~gK~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~ 322 (454)
T 4ao9_A 244 QALRESATQVGALLVFDEVMTS-RLAPHGLANKLGIRSDLTTLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFN 322 (454)
T ss_dssp HHHHHHHHHHTCEEEEECTTGG-GGSTTCHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTT
T ss_pred HHHHHHHhhcCCEEEEECCCcC-CCccccchhccCCCCcEEEeccccCCCCcceeeeeHHHHHHHHhhccCCccccCCCC
Confidence 9999999999999999999998 788888899999999999999999999999999999999998875 35677899999
Q ss_pred CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHH
Q 017633 243 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 243 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
+|++++++++++++.++++++.+++.++.++++++|+++..+.+.+..+.+.|.++++++....+.++......+.....
T Consensus 323 gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~ 402 (454)
T 4ao9_A 323 NNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQ 402 (454)
T ss_dssp TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHH
Confidence 99999999999999998888999999999999999999998888888999999999999877666665555544555567
Q ss_pred HHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 323 RFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 323 ~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++..|+++||++.|.+ .++++..+|++||++++++|++++.+
T Consensus 403 ~~~~~ll~~Gv~~~p~~--~~~~s~~~T~~dId~~l~al~~~l~~ 445 (454)
T 4ao9_A 403 LLFFHLLNEDIYSSPRG--FVVLSLPLTDADIDRYVAAIGSFIGG 445 (454)
T ss_dssp HHHHHHHHTTEECCTTC--EEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEcCCC--CEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 88899999999999876 34566778999999999999999875
No 2
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=7.6e-51 Score=377.72 Aligned_cols=364 Identities=46% Similarity=0.833 Sum_probs=305.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++||++|++++++.+++.+...++++++...+|++++++.+++.+++++++||++|++.++++++.++++++||++++
T Consensus 66 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~ 145 (434)
T 3l44_A 66 PIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAG 145 (434)
T ss_dssp TCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETT
T ss_pred ccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcC
Confidence 47899999999999999998866667888999999999999998789999999999999999999887778899999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+||+.+...+...+.+......+...+++.....+++.+|++|+++|+++++++++++++++++|+++++|.+.++++++
T Consensus 146 ~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l 225 (434)
T 3l44_A 146 CYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFL 225 (434)
T ss_dssp CCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHH
T ss_pred ccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHH
Confidence 99999888887776654433334444443333446777888899999999987556899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||++||+||+|++|+.|..+..+.+++.||+.+|||++++|+|+|++++++++++.+...+...+++|+++
T Consensus 226 ~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~ 305 (434)
T 3l44_A 226 EKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAG 305 (434)
T ss_dssp HHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCCCc
Confidence 99999999999999999999998666667778889999999999999999999999999999998875555667889999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
|+++++++.++++.+.++++.++++++.+++++.|+++....+....+.+.+.++++.+......++.....++.....+
T Consensus 306 ~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (434)
T 3l44_A 306 NPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGK 385 (434)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHH
Confidence 99999999999998877889999999999999999998777777667888899999988644333332222334455678
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.|+++||.+++++...+++++.++++++++++++|++++.+
T Consensus 386 ~~~~l~~~Gv~v~~~~~~~~rl~~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 386 FFKLMLQEGVNLAPSKYEAWFLTTEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp HHHHHHHTTEECCSSTTCCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeecCCCcEEEecccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999887777888899999999999999999864
No 3
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=9e-50 Score=369.90 Aligned_cols=365 Identities=52% Similarity=0.899 Sum_probs=298.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|++++++.+++++...++++++...++++++++.+++.+++++++||++|++.++++++.+++++.||++++
T Consensus 64 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~ 143 (429)
T 4e77_A 64 PMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEG 143 (429)
T ss_dssp TCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETT
T ss_pred ccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcC
Confidence 37899999999999999998866667788999999999999998789999999999999999998887778899999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+||+.+...+...+.+......+...++.......+..++++|+++|+++++++++++++++++|+++++|.+.++++|+
T Consensus 144 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l 223 (429)
T 4e77_A 144 CYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFL 223 (429)
T ss_dssp CCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHH
T ss_pred ccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHH
Confidence 99999876665554433222223344444444556677888899999999997666899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||++||+||+|++|+.|..+..+.+++.||++|+||++++|+|+|++++++++++.+...+...+++|++.
T Consensus 224 ~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~ 303 (429)
T 4e77_A 224 PGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIGGGMPVGAFGGRREVMNALAPTGPVYQAGTLSG 303 (429)
T ss_dssp HHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGGTTSCCEEEEECHHHHTTBTTTSSBCC--CCCC
T ss_pred HHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeecccccCCCCeEEEEECHHHHHHhccCCCccccCCCCC
Confidence 99999999999999999999998666677778899999999999999999999999999999998875545567889999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC-CCcccchhcccccHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFA 322 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 322 (368)
|+++++++.++++.++++++.++++++.+++++.|+++....+......+.+.++++.+... ...++.....++.....
T Consensus 304 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (429)
T 4e77_A 304 NPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFK 383 (429)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHH
Confidence 99999999999998877889999999999999999998877777767888899999988653 12333333334445568
Q ss_pred HHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 323 RFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 323 ~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++++.|+++||.+.+++.+.+++++.++++|+++++++|+++++++
T Consensus 384 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (429)
T 4e77_A 384 RFFHLMLEEGVYLAPSAFEAGFMSLAHSNEDIQKTVNAARRCFAKL 429 (429)
T ss_dssp HHHHHHHHTTEECCSSTTSCEECCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCeEEeecCCCCEEEeccCCHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999877777888999999999999999998763
No 4
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=2.1e-50 Score=374.07 Aligned_cols=364 Identities=55% Similarity=0.912 Sum_probs=307.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|++++++.+++++...++++++...+|++++++.+++.+++++++||++|++.++++++.+++++.||++++
T Consensus 64 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~ 143 (429)
T 3k28_A 64 PLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIG 143 (429)
T ss_dssp TCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred hcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 47899999999999999998876667888999999999999998789999999999999999999887778889999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+||+.+...+...+.+......+...+++......++.++++|+++++++++++++++++++++|+++++|.+.++++++
T Consensus 144 ~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l 223 (429)
T 3k28_A 144 CYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFL 223 (429)
T ss_dssp CCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHH
T ss_pred CcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHH
Confidence 99999888777766654433344444443333346677888899999999987656899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||++||+||+|++|+.|..+..+.+++.||+.+|||++++|+|+||+++++++++.+...+...+++|+++
T Consensus 224 ~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~ 303 (429)
T 3k28_A 224 EGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTCLGKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSG 303 (429)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEECGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCceehhhhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCCC
Confidence 99999999999999999999988556666677889999999999999989999999999999998875455567789999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
|+++++++.++++.++ +++.++++++++++++.|+++....+....+.+.+.++++.+......++.....++.....+
T Consensus 304 ~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (429)
T 3k28_A 304 NPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAA 382 (429)
T ss_dssp CHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHH
T ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHH
Confidence 9999999999999775 668889999999999999998777777667888899999987654444444444455556788
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+++.|+++||.+++++...+++++.++++++++++++|++++.++
T Consensus 383 ~~~~l~~~Gv~v~~~~~~~~r~~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 383 YYREMVEQGVFLPPSQFEGLFLSTVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHTTEECCSSTTSCBCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCeEEecCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999998777778888999999999999999998753
No 5
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=1.7e-49 Score=365.51 Aligned_cols=355 Identities=24% Similarity=0.317 Sum_probs=289.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|.+++.+++.+..+ ++.+.+...+|++.|.+..+ +.+.++|++||++|++.|+++++.++++.+|
T Consensus 75 ~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~i 154 (456)
T 4atq_A 75 VTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAV 154 (456)
T ss_dssp TCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeE
Confidence 578999999999999999988543 34567888999999999997 3789999999999999999999999999999
Q ss_pred EEEcCCCCCCchhhhhhcCCCcc-ccCC-CCCCCCCCCCCCcccc---cCCCCHHHHHHHHHc-----CCCCeEEEEEcc
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVA-TLGL-PDSPGVPKGATYETLT---APFNDVSALENLFEN-----NKGEIAAIILEP 148 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~---~~~~d~~~le~~~~~-----~~~~~~~~~~~~ 148 (368)
|.+.++|||.+..++..++.... ...+ +...++.......... ...++.+.+++.+.. ++++++++++||
T Consensus 155 i~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEP 234 (456)
T 4atq_A 155 VAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEP 234 (456)
T ss_dssp EEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECS
T ss_pred EEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEecc
Confidence 99999999999988888776432 1111 1111111000000000 111234444443331 346899999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
+.+++|.+.++++|+++++++|++||++||+||+++|| |+|..++++++++.||+++++|+++||+++|.+++++++++
T Consensus 235 iqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~P~~av~~~~~i~~ 314 (456)
T 4atq_A 235 IQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGLPLSAITGRADLLD 314 (456)
T ss_dssp SBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCEEEEEEHHHHT
T ss_pred ccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcCCceeeEecHHHHh
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999988
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEeeccceEEEEe
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-----GHAICGGYISGMFGFFF 302 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~ 302 (368)
.+. ...+++||++|++++++++++++.++++++.++.++..++++++|+++..++ +.+..+++.|.++++++
T Consensus 315 ~~~---~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel 391 (456)
T 4atq_A 315 AVH---PGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIEL 391 (456)
T ss_dssp TSC---TTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEE
T ss_pred ccc---ccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEE
Confidence 886 4558899999999999999999999999999999999999999999988765 34567899999999998
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Cc--cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EA--GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~--~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...... .+.......+.+.|+++|+++.+.+. .. +.|+++++++++++++++|+++++.
T Consensus 392 ~~~~~~------~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 392 VQPGSK------EPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp BCTTSC------CBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCC------CcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 653211 13445567899999999999987543 22 3578999999999999999999875
No 6
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=7.7e-50 Score=370.22 Aligned_cols=365 Identities=70% Similarity=1.163 Sum_probs=310.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|++++++.+++++...++++++...++++++++.+++.+++++++||++|++.++++++.++++++||++++
T Consensus 63 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~ 142 (427)
T 3fq8_A 63 PAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEG 142 (427)
T ss_dssp TCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEET
T ss_pred hhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 37899999999999999998866666788999999999999998789999999999999999998887778889999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+||+.+..+....+.+.....++...++......++..++++|+++|+++++++++++++++++|+++++|.+.++++|+
T Consensus 143 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l 222 (427)
T 3fq8_A 143 CYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFL 222 (427)
T ss_dssp CCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHH
T ss_pred CcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHH
Confidence 99998887776666544333334444443333445677788899999999998767899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
++|+++|++||++||+||+|+||+.|..+..+.+++.||+.|+||++++|+|+||+++++++++.+...+...+++|+++
T Consensus 223 ~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~ 302 (427)
T 3fq8_A 223 EGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSG 302 (427)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEEECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChhhhhhhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCc
Confidence 99999999999999999999988556666677889999999999999999999999999999998875555567889999
Q ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 244 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
|+++++++.++++.+.++++.++++++.+++++.|+++....+.+....+.+.++++.+......++.....++.....+
T Consensus 303 ~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (427)
T 3fq8_A 303 NPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSR 382 (427)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHH
Confidence 99999999999998877889999999999999999998877776667778899999988654433333333445555678
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+++.|+++||.+++++.+.+++++.++++++++++++|++++.++
T Consensus 383 l~~~l~~~Gi~v~~~~~~r~~~~~~~t~e~i~~~l~~l~~~l~~~ 427 (427)
T 3fq8_A 383 FHRGMLEQGIYLAPSQFEAGFTSLAHTEEDIDATLAAARTVMSAL 427 (427)
T ss_dssp HHHHHHHTTEECCSSTTSCEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCcEEecCCCCCEEeeCcCCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999877777888999999999999999998764
No 7
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=1.1e-49 Score=368.03 Aligned_cols=361 Identities=17% Similarity=0.190 Sum_probs=292.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC----CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|+|.+++.+++++...+ +.+++...+|+++|.+..+ +.++|+|++||++|++.|+++++.+
T Consensus 78 ~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~ 157 (473)
T 4e3q_A 78 NMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGK 157 (473)
T ss_dssp TCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999986432 4467888999999999998 6899999999999999999999865
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC----------CHHHHHHHHHc-CCCCe
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN----------DVSALENLFEN-NKGEI 141 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------d~~~le~~~~~-~~~~~ 141 (368)
+++.+||.+.++|||.+..++..++.+......+...+..+...+..+..+.. ..+++++.+.+ +++++
T Consensus 158 ~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~i 237 (473)
T 4e3q_A 158 PQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTI 237 (473)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCce
Confidence 45678999999999999999998876543322233333222111111111111 13556666654 55689
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceee
Q 017633 142 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAY 219 (368)
Q Consensus 142 ~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v 219 (368)
+++++||+.+++|.+.++++|+++|+++|++||++||.||+++|| |+|..++++++++.||+++++|++++| +|+|.+
T Consensus 238 Aavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av 317 (473)
T 4e3q_A 238 AGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAV 317 (473)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEE
T ss_pred EEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccc
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999987 899999
Q ss_pred eehHHHHHHhcC----CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 220 GGRRDIMEMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 220 ~~~~~~~~~~~~----~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
++++++++.+.. .+.+.+++||++|++++++++++++.++++++.++.++..++++++|+++.. .+....+++.|
T Consensus 318 ~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~-~~~v~~vRG~G 396 (473)
T 4e3q_A 318 ILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAE-RPNIGEYRGIG 396 (473)
T ss_dssp EECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTT-STTEEEEEEET
T ss_pred cccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhc-CCCeeEEeecc
Confidence 999998877642 2356789999999999999999999999999999999999999999998754 45567899999
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-cccccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++++++....... ....+.......+.+.++++|+++++.++.. +.|++.++++|+++++++|++++++
T Consensus 397 l~~gielv~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 397 FMWALEAVKDKASK--TPFDGNLSVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp TEEEEEECSBTTTT--BCCCGGGCHHHHHHHHHHHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCcccc--ccccccHHHHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999986532111 0011223346789999999999999877532 4578999999999999999999875
No 8
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=2.6e-46 Score=348.22 Aligned_cols=348 Identities=23% Similarity=0.310 Sum_probs=285.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||++|+|++++.+++.+..++ .++++...+|++++++.++ ..+++++++||++|++.|+++++.+++++.|
T Consensus 72 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~i 151 (451)
T 3oks_A 72 VTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAV 151 (451)
T ss_dssp TCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEE
T ss_pred ccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeE
Confidence 5789999999999999999876443 3567889999999999997 4689999999999999999999887888999
Q ss_pred EEEcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCC------------------CHHHHHHHHHc--C
Q 017633 79 IKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFN------------------DVSALENLFEN--N 137 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------------d~~~le~~~~~--~ 137 (368)
|++.++|||.+...+..++.. .....+. .....+..++.. +++.+++.+.+ .
T Consensus 152 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 224 (451)
T 3oks_A 152 VAFDHAYHGRTNLTMALTAKVMPYKDGFG-------PFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG 224 (451)
T ss_dssp EEETTCCCCSSHHHHHHCCCCTTTTTTCC-------SCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC
T ss_pred EEEcCCcCCccHHHHHhcCCCcccccCCC-------CCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC
Confidence 999999999999888887653 2111111 111122333322 24444455543 2
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccc
Q 017633 138 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPV 216 (368)
Q Consensus 138 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~i 216 (368)
++++++++++|+++++|.+.++++|+++|+++|++||++||+||+|++| +.|..+..+++++.||+++|||++++|+|+
T Consensus 225 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~i 304 (451)
T 3oks_A 225 ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGGLPL 304 (451)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSC
T ss_pred CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCCcce
Confidence 3579999999999999999999999999999999999999999999999 888888888999999999999999999999
Q ss_pred eeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 217 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 217 G~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
||+++++++++.+.. ..+.+|+++|+++++++.++++.+.++++.++++++.+++++.|.++...++....+.+.|.
T Consensus 305 G~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~ 381 (451)
T 3oks_A 305 SAVTGRAEIMDSPHV---SGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGA 381 (451)
T ss_dssp EEEEEEHHHHTCSCT---TSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT
T ss_pred EEEEECHHHHhhhcC---CCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeE
Confidence 999999999888773 44778999999999999999998877889999999999999999998877777777888899
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++++.+.... .+.+......++++.|+++||.+.+++. ..+ ++++.++++++++++++|++++.+
T Consensus 382 ~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 382 MIAMELVKAG------TTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EEEEEEBSTT------SCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCc------cCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999885311 0112345577899999999999998754 333 457888999999999999999865
No 9
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=3e-46 Score=347.82 Aligned_cols=346 Identities=26% Similarity=0.348 Sum_probs=283.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++||++|+|++++.+++++..++ .++.+...+|++++++.++ ..+++++++||++|++.++++++.+++++.|
T Consensus 75 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~i 154 (453)
T 4ffc_A 75 VTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAV 154 (453)
T ss_dssp TCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEE
T ss_pred cCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEE
Confidence 5789999999999999999886443 3577889999999999997 3689999999999999999999877888999
Q ss_pred EEEcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCC----C-------------HHHHHHHHHcCCCC
Q 017633 79 IKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFN----D-------------VSALENLFENNKGE 140 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----d-------------~~~le~~~~~~~~~ 140 (368)
|++.++|||.+...+..++.. .....+.. ....+..++.. | ++.+++.+. +++
T Consensus 155 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~--~~~ 225 (453)
T 4ffc_A 155 VAFDNAYHGRTNLTMALTAKSMPYKSQFGP-------FAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG--AQS 225 (453)
T ss_dssp EEETTCCCCSSHHHHHHCCCCTTTTTTSCS-------CCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC--GGG
T ss_pred EEEcCccCCcchHHHhhcCCCcccccCCCC-------CCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC--CCC
Confidence 999999999999888887653 11111110 11122222221 2 244555443 347
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceee
Q 017633 141 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAY 219 (368)
Q Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v 219 (368)
+++++++|+++++|.+.++++|+++|+++|++||++||+||+|++| +.|..++.+++++.||+.+|||++++|+|+||+
T Consensus 226 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G~~~G~~ 305 (453)
T 4ffc_A 226 LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGGMPLSAV 305 (453)
T ss_dssp EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEE
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCCcCeEEE
Confidence 8999999999999999999999999999999999999999999999 888878888899999999999999999999999
Q ss_pred eehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEE
Q 017633 220 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 299 (368)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (368)
++++++++.+.. ..+.+|+++|+++++++.++++.+.++++.++++++.+++++.|.++...++....+.+.|.+++
T Consensus 306 ~~~~~i~~~~~~---~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 382 (453)
T 4ffc_A 306 TGRAELMDAVYA---GGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLA 382 (453)
T ss_dssp EEEHHHHTTSCT---TSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEE
T ss_pred EECHHHHhhhcc---cCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEE
Confidence 999999888873 44778999999999999999998877889999999999999999998878777677888899999
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccc--ccccCCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~--~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++..... +.++.....++++.|+++||.+.+++. ..+ ++++.++++++++++++|++++.+
T Consensus 383 ~~~~~~~~------~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 383 IEIVKPGT------LEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp EEEBCTTS------CCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCcc------cCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 98853110 112345578899999999999998754 333 457888999999999999999865
No 10
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.8e-47 Score=353.04 Aligned_cols=345 Identities=22% Similarity=0.305 Sum_probs=281.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
++++||++|++++++.+++++...+ +++++...+|++++++.++ +.+++++++||++|++.|+++++.+ +
T Consensus 86 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~ 165 (457)
T 3tfu_A 86 TAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLP 165 (457)
T ss_dssp TCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred hhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999885432 3567889999999999998 7789999999999999999999876 6
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCC-CccccCC-CCCCCCCCCCCCcccccC-----CCCHHHHHHHHHcCCCCeEEEEE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGS-GVATLGL-PDSPGVPKGATYETLTAP-----FNDVSALENLFENNKGEIAAIIL 146 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~d~~~le~~~~~~~~~~~~~~~ 146 (368)
+++.||+++++|||.+..++..++. ......+ +...+ ......| .+|+++|++++++++++++++++
T Consensus 166 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ 239 (457)
T 3tfu_A 166 GKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAA------QVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVV 239 (457)
T ss_dssp TCCEEEEETTCCCCSSHHHHTTSCCC----------CCC------CEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCC------ceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 7789999999999999888877442 1111111 10111 1111111 13789999999865568999999
Q ss_pred cc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehH
Q 017633 147 EP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRR 223 (368)
Q Consensus 147 ~~-~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~ 223 (368)
+| +++++|.+.++++++++|+++|++||++||+||+|+|| +.|..++.+.+++.||++||||+++|| +|+|++++++
T Consensus 240 ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~ 319 (457)
T 3tfu_A 240 EPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTA 319 (457)
T ss_dssp CSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEH
T ss_pred eCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcH
Confidence 99 88999999999999999999999999999999999999 888888888999999999999999988 6999999999
Q ss_pred HHHHHhc--CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 224 DIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 224 ~~~~~~~--~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
++++.+. ..+...+++|+++|+++++++.++++.++++++.++++++.++++++|+++. ..+....+++.|.+++++
T Consensus 320 ~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~vr~~G~~~~i~ 398 (457)
T 3tfu_A 320 DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALPAVTDVRVCGAIGVIE 398 (457)
T ss_dssp HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GSTTEEEEEECSSCEEEE
T ss_pred HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCCCeeeeecCCeEEEEE
Confidence 9999885 2334567899999999999999999998888899999999999999998754 445555677889999988
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-cccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.. +.+..++++.|+++||.+.+.+... +.+++.++++|+++++++|++++.++
T Consensus 399 l~~-------------~~~~~~~~~~l~~~Gv~v~~~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 399 CDR-------------PVDLAVATPAALDRGVWLRPFRNLVYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp ESS-------------CCCHHHHHHHHHHTTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ECC-------------cccHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 742 1125789999999999999876321 23467889999999999999998753
No 11
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=1.1e-46 Score=352.40 Aligned_cols=355 Identities=19% Similarity=0.259 Sum_probs=287.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
++++||++|+|++++.+++++... +.++++...+|++++++.++ +.+++++++||++|++.|+++++.+ +
T Consensus 65 ~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~ 144 (476)
T 3i5t_A 65 CAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRP 144 (476)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred hccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999988532 24678899999999999998 7889999999999999999999887 7
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-----C-C--------HHHHHHHHHc-CC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----N-D--------VSALENLFEN-NK 138 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-d--------~~~le~~~~~-~~ 138 (368)
++++||+++++|||.+..++..++.......+... ..+...+..|. + | +++||+++++ ++
T Consensus 145 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 145 QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIA-----QDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCC-----CTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCCEEEEEcCCcCcCChhhccccCChhhccccCCC-----CCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 78899999999999999888887765433222111 11111222222 2 1 7899999875 23
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccc-ccCCCcchhhhhhhccCC-cc
Q 017633 139 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE-YFGVTPDLTTLGKIIGGG-LP 215 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~-~~~~~~di~s~sK~~~~G-~~ 215 (368)
++++++++||+++++|.+.++++|+++|+++|++||++||+||+|+|| +.|..+.++ ++++.||++++||++++| +|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~p 299 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVP 299 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSC
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcC
Confidence 579999999999999999999999999999999999999999999999 888877788 899999999999999999 99
Q ss_pred ceeeeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 017633 216 VGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 291 (368)
Q Consensus 216 iG~v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 291 (368)
+|++++++++++.+... +.+.+++|+++|++++++++++++.++++++.++++++.+++++.|+.+ .+.+....+
T Consensus 300 lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~v~~v 378 (476)
T 3i5t_A 300 LGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASL-RDLPGVAET 378 (476)
T ss_dssp CEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTSTTEEEE
T ss_pred eEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEE
Confidence 99999999999988742 2346778999999999999999998877889999999999999999854 355666678
Q ss_pred eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 292 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.|.++++++....... ....+......++++.|+++||.+.+.+ ..+| +++.++++++++++++|++++.+
T Consensus 379 ~~~G~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 379 RSVGLVGCVQCLLDPTRA--DGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp EEETTEEEEEECCC-------CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCceeEEEEecCcccc--ccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 889999999885421000 0000011135688999999999999876 4455 45899999999999999998854
No 12
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=2.3e-46 Score=349.23 Aligned_cols=359 Identities=20% Similarity=0.252 Sum_probs=291.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh---c---C
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---T---G 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~---~---~ 74 (368)
++++||++|+|++++.+++++... .+++++...++++++++.++ +.+ +++++||++|++.++++++.+ . +
T Consensus 60 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~ 138 (452)
T 3n5m_A 60 CVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGEPH 138 (452)
T ss_dssp TCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTT
T ss_pred hccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999987532 34677899999999999987 445 999999999999999998765 4 7
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCC---------HHHHHHHHH-cCCCCeEE
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND---------VSALENLFE-NNKGEIAA 143 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d---------~~~le~~~~-~~~~~~~~ 143 (368)
++.||+++++||+.....+..++.......+ +...+......+.....+++| +++|+++++ .+++++++
T Consensus 139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~ 218 (452)
T 3n5m_A 139 RYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAA 218 (452)
T ss_dssp CCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEE
T ss_pred CCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEE
Confidence 8899999999999988888877765432221 222222222233344455566 899999998 44468999
Q ss_pred EEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeee
Q 017633 144 IILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYG 220 (368)
Q Consensus 144 ~~~~~~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~ 220 (368)
++++|+ ++ +|.+.++++++++|+++|++||++||+||+|++| +.|..+..+.+++.||+++|||++++| +|+|+++
T Consensus 219 vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~ 297 (452)
T 3n5m_A 219 FIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATA 297 (452)
T ss_dssp EEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred EEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEEEE
Confidence 999999 78 9989999999999999999999999999999999 888888888999999999999999999 9999999
Q ss_pred ehHHHHHHhcC---CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 221 GRRDIMEMVAP---AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 221 ~~~~~~~~~~~---~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
+++++++.+.. .+...+++|+++|+++++++.++++.++++++.++++++.+++++.|.++...++....+.+.+.+
T Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 377 (452)
T 3n5m_A 298 VKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLL 377 (452)
T ss_dssp EEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSC
T ss_pred ECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEE
Confidence 99999999864 345567889999999999999999988778899999999999999999987777766778888999
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------Ccccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+++.+....... ...+.....++++.|+++||.+.+++. ..+|+ ++.++++++++++++|++++.++
T Consensus 378 ~~i~~~~~~~~~----~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 452 (452)
T 3n5m_A 378 VGIELVNDKETK----EPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMERI 452 (452)
T ss_dssp EEEEEEEETTTT----EECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEecCCccc----CCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhC
Confidence 998875321100 000123346789999999999998762 34554 68899999999999999998764
No 13
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=8.1e-47 Score=350.59 Aligned_cols=363 Identities=41% Similarity=0.720 Sum_probs=286.7
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+++||.+|++++++.+++.+...++++.+...++++++++++++.+++++++||++|++.++++++.+.++++||+++++
T Consensus 68 ~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~ 147 (434)
T 2epj_A 68 LILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGC 147 (434)
T ss_dssp CTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETC
T ss_pred ccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 57999999999999999988555667888899999999999866789999999999999999987666778899999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
||+.....+...+........+...++......+++.++++|+++|+++++++++++++++++|+++++|.+.++++|++
T Consensus 148 yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 227 (434)
T 2epj_A 148 YHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLA 227 (434)
T ss_dssp CCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHH
T ss_pred cCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHH
Confidence 99987766554433111000011112111011235556677999999999864347899999999988898899999999
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
+|+++|++||++||+||+|+||+.|..+..+.+++.||++||||++++|+|+||+++++++++.+...+...+++|+++|
T Consensus 228 ~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~ 307 (434)
T 2epj_A 228 ALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDIIVLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAH 307 (434)
T ss_dssp HHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTC
T ss_pred HHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCeeeecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcC
Confidence 99999999999999999999885565566677888999999999999999999999999998888753334567888999
Q ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 245 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
+++++++.++++.+.++++.++++++++++++.|+++..+.+....+.+.+.++++.+.......+...+.++.....++
T Consensus 308 ~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 387 (434)
T 2epj_A 308 PITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKL 387 (434)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHH
Confidence 99999999999988778899999999999999999876556665556778889999874311111111111123346789
Q ss_pred HHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 325 YRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.|+++||.+.+++...+++++.++++++++++++|++++++
T Consensus 388 ~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 388 HEEMLRRGVFIAPSNLEAVFTGLPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp HHHHHHTTEECCSSTTSCEECCTTCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeccCCCcEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999876667788899999999999999998864
No 14
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-46 Score=346.36 Aligned_cols=360 Identities=53% Similarity=0.893 Sum_probs=285.6
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+++||.+|++++++.+++++...++++.+...++++++++++++.+++++++||++|++.++++++.+.++++||+++++
T Consensus 64 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~ 143 (424)
T 2e7u_A 64 LILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGN 143 (424)
T ss_dssp CTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTC
T ss_pred cccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCC
Confidence 68899999999999999987655677888999999999999976789999999999999999987767778899999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
||+.....+...+.+......|...++......+++.++++|+++|++.++++++++++++++|+++++|.+.++++|++
T Consensus 144 yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 223 (424)
T 2e7u_A 144 YHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLK 223 (424)
T ss_dssp CCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHH
T ss_pred cCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHH
Confidence 99987766654433211100111112211011245566778999999999853347899999999998898899999999
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
+|+++ ++||++||+||+|+||+.|..+..+.+++.||++||||++++|+|+||+++++++++.+...+...+++|+++|
T Consensus 224 ~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~ 302 (424)
T 2e7u_A 224 ALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDLVTLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGN 302 (424)
T ss_dssp HHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSC
T ss_pred HHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcchhhhhhhhhCCcceEEEEEcHHHHhhhcccCCcccCCCCCCC
Confidence 99999 99999999999999885565566677888999999999999999999999999999888753344567888999
Q ss_pred HHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHH
Q 017633 245 PLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 323 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (368)
+++++++.++++.+.+ +++.+++.+++++++++|+++..+.+....+.+.+.++|+++......++.....++.....+
T Consensus 303 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 382 (424)
T 2e7u_A 303 PLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKR 382 (424)
T ss_dssp HHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHH
Confidence 9999999999998877 778999999999999999987666665545677888999987431111111111112344678
Q ss_pred HHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 324 FYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 324 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
+++.|+++||.+.+++...+++++.++++++++++++|++++
T Consensus 383 ~~~~l~~~Gv~v~~~~~~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 383 FFHGLLDRGIYWPPSNFEAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp HHHHHHTTTEECCSSSSSCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCeEEeccCCCceEeeccCCHHHHHHHHHHHHHhC
Confidence 999999999999998766677888999999999999999864
No 15
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=2.3e-46 Score=349.69 Aligned_cols=353 Identities=19% Similarity=0.230 Sum_probs=285.4
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC----CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|+|++++.+++++... .+++++...+|++++++.++ +.+++++++||++|++.++++++.+
T Consensus 66 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~ 145 (472)
T 3hmu_A 66 CVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQ 145 (472)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCC
Confidence 578999999999999999988531 24567899999999999998 6789999999999999999999876
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC----C---C--------HHHHHHHHHcC
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----N---D--------VSALENLFENN 137 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---d--------~~~le~~~~~~ 137 (368)
+++++||+++++|||.+...+..++....+..+.. ..+...+..|. + | +++|++++++.
T Consensus 146 ~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~------~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 219 (472)
T 3hmu_A 146 PEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGL------IPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILEL 219 (472)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCC------CSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCcCCCccHHhhhccCChhhccccCC------CCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhc
Confidence 36789999999999999988888776443222210 01111122222 1 2 78899988752
Q ss_pred -CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-c
Q 017633 138 -KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-L 214 (368)
Q Consensus 138 -~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~ 214 (368)
+++++++++||+++++|.+.++++|+++|+++|++||++||+||+|+|| +.|..++.+++++.||+++|||++++| +
T Consensus 220 ~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~ 299 (472)
T 3hmu_A 220 GENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYA 299 (472)
T ss_dssp CGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSS
T ss_pred CCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCc
Confidence 3579999999999999999999999999999999999999999999999 888888888999999999999999976 8
Q ss_pred cceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH-HHHHHHHHHHHHHHHhcCCceEEee
Q 017633 215 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-KITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 215 ~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
|+|++++++++++.+. .+...+++|+++|+++++++.++++.++++++.++++ ++.+++++.|+++ .+.+....+++
T Consensus 300 plG~v~~~~~i~~~~~-~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~v~~vr~ 377 (472)
T 3hmu_A 300 PIGGSIVCDEVAHVIG-KDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEAL-TDHPLVGEAKI 377 (472)
T ss_dssp CCEEEEEEHHHHHHHT-TSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGG-GGSTTEEEEEE
T ss_pred ceEEEEECHHHHHhcc-cCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEe
Confidence 9999999999999883 3456678899999999999999999887788999999 9999999999664 44666667888
Q ss_pred ccceEEEEeecCCCcccchhcccc-cHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSE-TTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.|.++++++...... .....+. .....++++.|+++||.+++++ ..+| +++.++++++++++++|++++.+
T Consensus 378 ~G~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 378 VGMMASIALTPNKAS--RAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp ETTEEEEEECSCGGG--TCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEEecCccc--cccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999988532100 0000001 2335788999999999999876 4544 46899999999999999998864
No 16
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.4e-45 Score=344.43 Aligned_cols=357 Identities=19% Similarity=0.216 Sum_probs=288.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC----CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|++++++.+++.+.. ..+++++...+|++++++.++ +.+++++++||++|++.++++++.+
T Consensus 62 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~ 141 (460)
T 3gju_A 62 CVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGR 141 (460)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999999999988742 235677889999999999987 7789999999999999999998765
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC----CC------------HHHHHHHHHc
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----ND------------VSALENLFEN 136 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d------------~~~le~~~~~ 136 (368)
++++.||+++++|||.+......++.......+.... .+...+..|. +| +++|++++++
T Consensus 142 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~ 216 (460)
T 3gju_A 142 PEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPR-----APVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA 216 (460)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSC-----TTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCC-----CCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh
Confidence 5788999999999999998888877654332221110 0111111111 22 6899998874
Q ss_pred -CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-
Q 017633 137 -NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG- 213 (368)
Q Consensus 137 -~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G- 213 (368)
+++++++++++|+++++|.+.++++++++|+++|++||++||+||+|++| +.|..+..+++++.||+++|||++++|
T Consensus 217 ~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~ 296 (460)
T 3gju_A 217 EGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAY 296 (460)
T ss_dssp HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTS
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCC
Confidence 33579999999999999999999999999999999999999999999999 888777788899999999999999988
Q ss_pred ccceeeeehHHHHHHhcCC----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 017633 214 LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 289 (368)
Q Consensus 214 ~~iG~v~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 289 (368)
+|+|++++++++++.+... ....+++|+++|+++++++.++++.+.++++.++++++.++++++|.+.+.+++...
T Consensus 297 ~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 376 (460)
T 3gju_A 297 APLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVG 376 (460)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred CCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 8999999999999888521 345677899999999999999999887788999999999999999988877777667
Q ss_pred EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-Cccc--cccCCCHHHHHHHHHHHHHHHh
Q 017633 290 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGF--TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~--~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.+.+.++++.+...... .....+......++++.|+++||.+.+++. ..+| +++.++++++++++++|++++.
T Consensus 377 ~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 377 EVRGDGMLAAVEFVADKDD--RVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVK 454 (460)
T ss_dssp EEEEETTEEEEEECSBTTT--TBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeeeeEEEEEEEccCccc--cccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 7888899999988642110 000111223467899999999999998763 4445 4588999999999999999986
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 455 ~ 455 (460)
T 3gju_A 455 S 455 (460)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=9e-46 Score=344.68 Aligned_cols=360 Identities=22% Similarity=0.248 Sum_probs=269.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh---cC--
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---TG-- 74 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~---~~-- 74 (368)
++++||++|++++++.+++++... .+++++...++++++++.++ +.+++++++||++|++.++++++.+ ++
T Consensus 55 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~ 134 (448)
T 3dod_A 55 LNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKP 134 (448)
T ss_dssp TCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCC
Confidence 578999999999999999987533 34567889999999999997 6789999999999999999999876 66
Q ss_pred -CceEEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccc--------cCCCCHHHHHHHHHcCCCCeEEE
Q 017633 75 -RERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT--------APFNDVSALENLFENNKGEIAAI 144 (368)
Q Consensus 75 -~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~d~~~le~~~~~~~~~~~~~ 144 (368)
+++||+++++|||.....+..++.......+ +....+........+. ...+|+++||+++++++++++++
T Consensus 135 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 214 (448)
T 3dod_A 135 EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAAL 214 (448)
T ss_dssp TCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEE
Confidence 7999999999999988777776654322111 1011111000000000 11124899999998555689999
Q ss_pred EEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeee
Q 017633 145 ILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGG 221 (368)
Q Consensus 145 ~~~~~~-~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~ 221 (368)
+++|++ +++|.+.++++++++|+++|++||++||+||+|++| +.|..++.+.+++.||+++|||++++| +|+|++++
T Consensus 215 i~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~ 294 (448)
T 3dod_A 215 SIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFA 294 (448)
T ss_dssp EEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEE
T ss_pred EEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEE
Confidence 999999 999999999999999999999999999999999999 888877888999999999999999999 59999999
Q ss_pred hHHHHHHhcC----CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 222 RRDIMEMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 222 ~~~~~~~~~~----~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
++++++.+.. .+...+++|+++++++++++.++++.+.++++.++++++.+++++.|.+ +...+....+.+.|.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~ 373 (448)
T 3dod_A 295 TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFM 373 (448)
T ss_dssp EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTE
T ss_pred CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEE
Confidence 9999998874 1235577899999999999999999887788999999999999999998 6666666677788999
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.+........ ..........++++.|+++||.+.+++ ..++ +++.++++++++++++|++++.+
T Consensus 374 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 374 CGAELVRSKETKE--PYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp EEEEECSBTTTTB--CCCGGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCccccc--ccchhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998854211000 000001124678999999999999876 4444 47889999999999999999864
No 18
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=2.1e-45 Score=343.16 Aligned_cols=356 Identities=19% Similarity=0.233 Sum_probs=286.2
Q ss_pred eeccCCCcHHHHHHHHHHHHcCC-C---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------
Q 017633 4 LIILFPSYLQVLAALGETMKKGT-S---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------ 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~-~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------ 72 (368)
++++||++|+|++++.+++++.. . .+++++...++++++++.++ +.+++++++||++|++.++++++.+
T Consensus 61 ~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~ 140 (459)
T 4a6r_A 61 CVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGK 140 (459)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999998743 1 24578899999999999998 6889999999999999999998765
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC----C---C--------HHHHHHHHHc-
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----N---D--------VSALENLFEN- 136 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---d--------~~~le~~~~~- 136 (368)
+++++||+++++|||........++.......+... ..+...+.+|. + | +++|++++++
T Consensus 141 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~ 215 (459)
T 4a6r_A 141 PEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLP-----IPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEI 215 (459)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCS-----CSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCCccHHHHhhcCChhhccccCCC-----CCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHc
Confidence 368899999999999998888887765432222110 11112222222 1 2 7889999875
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-c
Q 017633 137 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-L 214 (368)
Q Consensus 137 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~ 214 (368)
+++++++++++|+++++|.+.++++|+++|+++|++||++||+||+|++| +.|..+..+++++.||+++|||++++| +
T Consensus 216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~ 295 (459)
T 4a6r_A 216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYL 295 (459)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSS
T ss_pred CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCC
Confidence 23578999999999999999999999999999999999999999999999 888777788899999999999999976 8
Q ss_pred cceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHH-HHHHHHHHHHHHHHHhcCCceEEee
Q 017633 215 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-KITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 215 ~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
|+|++++++++++.+...+...+++|+++|+++++++.++++.++++++.++++ ++.+++++.|.+.+...+....+.+
T Consensus 296 ~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 375 (459)
T 4a6r_A 296 PIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRG 375 (459)
T ss_dssp CCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 999999999998887632345677899999999999999999887788999999 9999999999555556666667888
Q ss_pred ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.++++++...... .....+......++++.|+++||.+++++ ..+| +++.++++++++++++|++++.+
T Consensus 376 ~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 376 VGMVQAFTLVKNKAK--RELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp ETTEEEEEECSBTTT--TBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCccc--cccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 899999988642110 00011233446789999999999999976 4444 46889999999999999998864
No 19
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=1.1e-49 Score=367.54 Aligned_cols=347 Identities=33% Similarity=0.507 Sum_probs=287.7
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+++||++|+|++++.+++.+...++++++...+|+++|++++++.+.+++++||++|++.|+++++.++++++||++++
T Consensus 111 ~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~ 190 (465)
T 2yky_A 111 AGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDG 190 (465)
Confidence 35799999999999999998865566788999999999999997678999999999999999999887788899999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|||++...+ .+ +...+++. .++.++++|+++|++++++++++++++++||+++++|.+.++++|+
T Consensus 191 ~yHG~~~~~~--sg--------~~~~g~~~----~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l 256 (465)
T 2yky_A 191 GYHGGLLNFA--SG--------HAPTNAPY----HVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFL 256 (465)
Confidence 9999887666 22 11112111 3455677899999999986546899999999988899899999999
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC--CCCccccccC
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTL 241 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~--~~~~~~~~t~ 241 (368)
++|+++|++||++||+||+|+ ++.|..++.+.+++.||++||||++++|+|+||+++++++++.+.. .+...+.+|+
T Consensus 257 ~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~ 335 (465)
T 2yky_A 257 DLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTF 335 (465)
Confidence 999999999999999999999 8666777788889999999999999999999999999999988875 2334577899
Q ss_pred CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 242 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 242 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
++|++++++++++++.++++++.+++.++.++++++|+++..+.+.+..+++.|.++++.+....+.++...+.++....
T Consensus 336 ~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~ 415 (465)
T 2yky_A 336 NNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLK 415 (465)
Confidence 99999999999999999878899999999999999999987666666678888999999875322222222122223335
Q ss_pred HHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 322 ARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++.|+++||++.+++... +++.++++|+++++++|++++.+
T Consensus 416 ~~~~~~ll~~GV~v~p~~~~~--~s~~~t~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 416 ELFFFHMLRKGIYLAPRGMYA--LSLEIADAGRDAFAEALADFIGE 459 (465)
Confidence 689999999999999876433 77889999999999999998865
No 20
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.4e-44 Score=331.65 Aligned_cols=338 Identities=24% Similarity=0.255 Sum_probs=284.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh-----cCCc
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRE 76 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~-----~~~~ 76 (368)
.+++||++|++++++.+++++..+. .++.+...++++++++.++ .+++++++||++|++.++++++.+ .+++
T Consensus 47 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~ 125 (395)
T 3nx3_A 47 VCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA-LERVFFTNSGTESIEGAMKTARKYAFNKGVKGG 125 (395)
T ss_dssp TCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCC
Confidence 4789999999999999998874322 3567889999999999885 689999999999999999888766 5688
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
+||+++++||+.........+.......+. ....++..++++|+++|+++++ +++++++++|+++++|.+
T Consensus 126 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~~G~~ 195 (395)
T 3nx3_A 126 QFIAFKHSFHGRTLGALSLTANEKYQKPFK-------PLISGVKFAKYNDISSVEKLVN---EKTCAIILESVQGEGGIN 195 (395)
T ss_dssp EEEEETTCCCCSSHHHHTTCCCHHHHGGGC-------SCCSCEEEECTTCHHHHHTTCC---TTEEEEEEESEECTTSCE
T ss_pred EEEEEcCCcCCCCHHHHhhcCCcccccccC-------CCCCCcEEeCCCCHHHHHHhcc---CCeEEEEEeCccCCCCcc
Confidence 999999999999888777766533221111 1123466677889999999987 579999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHH-HHHhcCCCC
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI-MEMVAPAGP 234 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~-~~~~~~~~~ 234 (368)
.++++++++|+++|++||++||+||+|++| +.|..+..+.++..||+.++||++++|+|+|++++++++ ++.+..
T Consensus 196 ~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~~G~~~~~~~~~~~~~~~--- 272 (395)
T 3nx3_A 196 PANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEA--- 272 (395)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTSCCEEEEECHHHHHHHSCT---
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCCceEEEEEchhhhhhhcCC---
Confidence 999999999999999999999999999999 777777788899999999999999999999999999998 888763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..++.+++.++++++++.++++.+.++++.++++++.+++++.|.++...++......+.+.++++.+..
T Consensus 273 ~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~---------- 342 (395)
T 3nx3_A 273 GDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDK---------- 342 (395)
T ss_dssp TCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT----------
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCC----------
Confidence 3466888999999999999999887788999999999999999999877777666677788898988742
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.....++.+.|+++||.+++++...+|+ ++.++++++++++++|+++++++
T Consensus 343 ---~~~~~~~~~~l~~~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 395 (395)
T 3nx3_A 343 ---SVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALKSF 395 (395)
T ss_dssp ---TSCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ---cchHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhC
Confidence 1125788999999999999987666654 67889999999999999998763
No 21
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=9.9e-44 Score=330.37 Aligned_cols=348 Identities=21% Similarity=0.283 Sum_probs=280.0
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-CC-CeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++||.+|++++++.+++.+...+ .++++...++++++++.++ +. +++++++||++|++.++++++.+.++++|
T Consensus 54 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~v 133 (439)
T 3dxv_A 54 AASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGV 133 (439)
T ss_dssp TCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEE
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEE
Confidence 3569999999999999999875433 3467889999999999997 55 79999999999999999988766788899
Q ss_pred EEEcCCCCCCchhhhhhcCCCc--cccCCCCCCCCCCCCCCcccccCCC----------CHHHHHHHHH-cCCCCeEEEE
Q 017633 79 IKFEGCYHGHADPFLVKAGSGV--ATLGLPDSPGVPKGATYETLTAPFN----------DVSALENLFE-NNKGEIAAII 145 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------d~~~le~~~~-~~~~~~~~~~ 145 (368)
|+++++||+.+...+...+... ....+.. ....+..++++ |+++|+++++ .+++++++++
T Consensus 134 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi 206 (439)
T 3dxv_A 134 IAFAGAYHGCTVGSMAFSGHSVQADAAKADG-------LILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAF 206 (439)
T ss_dssp EEETTCCCCSSHHHHCC-------------C-------EEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred EEECCCCCCCcHHHHhhcCCCchhhccccCC-------CCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999999999888877766532 1111100 00112222322 5899999994 4446899999
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHH
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~ 224 (368)
++|+++++|.+.++++++++|+++|++||++||+||+|++| +.|..+..+.+++.||++||||++++|+|+||++++++
T Consensus 207 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~riG~~~~~~~ 286 (439)
T 3dxv_A 207 IEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAE 286 (439)
T ss_dssp ECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTSCCEEEEEEHH
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCcceEEEEECHH
Confidence 99999999999999999999999999999999999999999 77777777888999999999999999999999999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+++.+.. ..+.+++ .++++++++.++++.+.++++.++++++.+++++.|.++...++......+.+.++++.+..
T Consensus 287 ~~~~~~~---~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 362 (439)
T 3dxv_A 287 ILDCASA---FAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVC 362 (439)
T ss_dssp HHTSCSS---SSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEE
T ss_pred HHhhhcC---CCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEec
Confidence 9888873 3456788 99999999999999887788999999999999999999887777666778889999988753
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.... ..+......++++.|+++||.+.+++. ..+|+ ++.++++++++++++|++++.+
T Consensus 363 ~~~~-----~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 363 DRQS-----REPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp ETTT-----TEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred Cccc-----cCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2110 112344567899999999999998764 34443 6788999999999999999865
No 22
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=9e-44 Score=329.80 Aligned_cols=352 Identities=21% Similarity=0.271 Sum_probs=266.9
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~------~ 73 (368)
++++||++|++++++.+++++... ..++++...++++++++.++ +.+++++++||++|++.++++++.+ +
T Consensus 40 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 40 VANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred ccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999887542 24667889999999999998 6789999999999999999988766 6
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCC--cccccCCC--------CHHHHHHHHHcC-CCCeE
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY--ETLTAPFN--------DVSALENLFENN-KGEIA 142 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------d~~~le~~~~~~-~~~~~ 142 (368)
+++.||+++++||+.........+.......+.. ... .+..++.+ |+++|++++++. +++++
T Consensus 120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~ 192 (430)
T 3i4j_A 120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTP-------LMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVA 192 (430)
T ss_dssp TCCEEEEETTC--------------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEE
T ss_pred CCcEEEEEeCCcCCCCcccccccCccccccccCC-------cCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEE
Confidence 7889999999999988777666655332211100 011 23344443 458999999753 25789
Q ss_pred EEEEcccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc-CCCcchhhhhhhccCC-cccee
Q 017633 143 AIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF-GVTPDLTTLGKIIGGG-LPVGA 218 (368)
Q Consensus 143 ~~~~~~~~~-~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~-~~~~di~s~sK~~~~G-~~iG~ 218 (368)
+++++|+++ ++|...++++++++|+++|++||++||+||+|++| +.|..+..+.+ ++.||+++|||++++| +|+||
T Consensus 193 ~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~ 272 (430)
T 3i4j_A 193 AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAG 272 (430)
T ss_dssp EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEE
T ss_pred EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEE
Confidence 999999999 89999999999999999999999999999999999 88877788888 9999999999999999 99999
Q ss_pred eeehHHHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 219 YGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 219 v~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
+++++++++.+... +...+.+++++|+++++++.++++.+.++++.++++++.+++++.|.+++...+....+.+.+.+
T Consensus 273 ~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 352 (430)
T 3i4j_A 273 LLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLL 352 (430)
T ss_dssp EEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTE
T ss_pred EEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEE
Confidence 99999999888642 22456788999999999999999988778899999999999999999987777766677788999
Q ss_pred EEEEeecCCCcccchhcccc-cHHHHHHHHHHHHcCeeecCCC-------CCccc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSE-TTKFARFYRGMLEEGVYFAPSQ-------FEAGF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~~~~~~-------~~~~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.+....... ... +....++++.|+++||.+.++. ...+| +++..+++++++++++|++++++
T Consensus 353 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 353 LGVVLGDLATGQ-----AFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp EEEEEC-----------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccC-----CCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 998874211000 000 1124679999999999999872 23344 45678999999999999999865
No 23
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=1.7e-43 Score=327.60 Aligned_cols=339 Identities=20% Similarity=0.261 Sum_probs=262.6
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~ 73 (368)
.+++||.+|++++++.+++++... ..++.+...+++++++++++ .+++++++||++|++.++++++.+ +
T Consensus 76 ~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~ 154 (433)
T 1z7d_A 76 SVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG-YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPE 154 (433)
T ss_dssp TTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCT
T ss_pred hcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC-CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC
Confidence 357999999999999999987432 23567788999999999884 689999999999999999987643 2
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++||+++++||+.+..++...+.+.....+. ....++..+|++|+++|+++++. +++++++++|+++++
T Consensus 155 gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~-------p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~ 225 (433)
T 1z7d_A 155 NMAKIVVCKNNFSGRTLGCISASTTKKCTSNFG-------PFAPQFSKVPYDDLEALEEELKD--PNVCAFIVEPIQGEA 225 (433)
T ss_dssp TCCEEEEETTC---------------------------------CEEEECTTCHHHHHHHHTS--TTEEEEEECSSBSTT
T ss_pred CCCeEEEEeCCcCCcchhhhcccCCccccccCC-------CCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCC
Confidence 448999999999998776666555322111110 01123456677799999999952 478999999999888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++++++|+++|++||++||+||+|+|| +.|..+.++.+++.||++||||++++| +|+||+++++++++.+..
T Consensus 226 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~ 305 (433)
T 1z7d_A 226 GVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP 305 (433)
T ss_dssp TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT
T ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc
Confidence 988888888999999999999999999999999 878777778889999999999999999 999999999998887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+..|+++|+++++++.++++.+.++++.+++++++++++++|+++....+....+.+.+.++++.+....
T Consensus 306 ---~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----- 377 (433)
T 1z7d_A 306 ---GEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL----- 377 (433)
T ss_dssp ---TCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT-----
T ss_pred ---ccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh-----
Confidence 346688899999999999999988777899999999999999998875445544456778889898874210
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..++++.|+++||.+.+++...+++ ++.++++|+++++++|++++.+
T Consensus 378 -------~~~~~~~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 378 -------VNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp -------CCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 124689999999999999875555554 6788999999999999998764
No 24
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=1e-43 Score=331.47 Aligned_cols=357 Identities=31% Similarity=0.459 Sum_probs=264.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+++||.+|++++++.+++.+...++++.+...++++++++.+++.+++++++||++|++.++++++.+.++++||+++++
T Consensus 69 ~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~ 148 (453)
T 2cy8_A 69 LVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGRRMILRFEGH 148 (453)
T ss_dssp CTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC-
T ss_pred cccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCC
Confidence 67899999999999999987655677889999999999999877789999999999999999987666677899999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
||+.....+...+.... .+...++.......++.++++|+++|+++++++++++++++++|+++++|.+.+++++++
T Consensus 149 yhg~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~ 225 (453)
T 2cy8_A 149 YHGWHDFSASGYNSHFD---GQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLR 225 (453)
T ss_dssp ------------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHH
T ss_pred cCCCchhhHhhcCCccC---CCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHH
Confidence 99987765543332000 011112211112345566777999999999854347899999999888888889999999
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCC--CCccccccCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA--GPMYQAGTLS 242 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~--~~~~~~~t~~ 242 (368)
+|+++|++||++||+||+|++|+.|..+..+.+++.||++|+||++++|+|+||+++++++++.+... +...+++|++
T Consensus 226 ~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~ 305 (453)
T 2cy8_A 226 EGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPDLTCLAKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFT 305 (453)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHTTSSSCC---------CC
T ss_pred HHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCCcEEEEChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCC
Confidence 99999999999999999999885555566677888999999999999999999999999998887641 2234667889
Q ss_pred CCHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec-----C-CCcccchhcc
Q 017633 243 GNPLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-----G-PVYNFEDAKK 315 (368)
Q Consensus 243 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~ 315 (368)
+|+++++++.++++. + .+++.+++++++++++++|+++..+.+....+.+.+.++|+.+.. . ....+.....
T Consensus 306 ~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 384 (453)
T 2cy8_A 306 GNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVAR 384 (453)
T ss_dssp CCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCC
T ss_pred CCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEecccccccccccccccccc
Confidence 999999999999998 7 678899999999999999998765566555567788899998742 0 0000000000
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.....++++.|+++||.+.+++ .+++++.++++++++++++|++++.+
T Consensus 385 ~~~~~~~~l~~~l~~~Gv~v~~~~--~~~l~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 385 PDVKMIAAMRMALILEGVDIGGRG--SVFLSAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp CCHHHHHHHHHHHHHTTEECBTTT--EEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHCCeEEeCCC--CEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 122345789999999999997654 25678889999999999999998764
No 25
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=4.4e-43 Score=325.48 Aligned_cols=357 Identities=22% Similarity=0.257 Sum_probs=275.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCC--CCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 5 IILFPSYLQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+++||++|++++++.+++.+.. ..+++.+...++++.++++++ +.+++++++||++|++.++++++.++++++||++
T Consensus 55 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~ 134 (433)
T 1zod_A 55 AVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGF 134 (433)
T ss_dssp CTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEE
Confidence 4789999999999999987742 235677888999999999998 6889999999999999999887655677899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC---------CHHHHHHHHHcC-CCCeEEEEEcccCC
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN---------DVSALENLFENN-KGEIAAIILEPVVG 151 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------d~~~le~~~~~~-~~~~~~~~~~~~~~ 151 (368)
+++||+.....+...+........+...++.....+..+..+++ |+++|+++++++ ++++++++++|+++
T Consensus 135 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~ 214 (433)
T 1zod_A 135 AQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILS 214 (433)
T ss_dssp TTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEET
T ss_pred CCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccC
Confidence 99999998877766544211100011111110000011112233 389999999752 24789999999988
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhc
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~ 230 (368)
++|...++++++++|+++|++||++||+||+|++| +.|..+..+.++..||++||||++++|+|+||+++++++++.+.
T Consensus 215 ~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G~~ig~~~~~~~~~~~~~ 294 (433)
T 1zod_A 215 SGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAH 294 (433)
T ss_dssp TTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTSSCEEEEECHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCCCCeeEEEEhHHHHHhhc
Confidence 88888888999999999999999999999999999 77776667778889999999999999999999999999988876
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.. ...+++|+++|+++++++.++++.+.++++.+++++++++++++|+++....+......+.+.++++.+......
T Consensus 295 ~~-~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~-- 371 (433)
T 1zod_A 295 EL-GYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRT-- 371 (433)
T ss_dssp HT-TCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTT--
T ss_pred cC-CCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccc--
Confidence 42 223447889999999999999998877789999999999999999887655565455677788889887531100
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCCC----Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+......++++.|+++||.+.+++. ..+|+ ++.++++++++++++|++++.+
T Consensus 372 ---~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 372 ---KEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp ---TEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---cCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 001123457899999999999998752 34454 6688999999999999998865
No 26
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=6e-43 Score=324.29 Aligned_cols=339 Identities=22% Similarity=0.285 Sum_probs=272.8
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------c
Q 017633 4 LIILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------T 73 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~ 73 (368)
.+++||.+|++++++.+++++...+ .++.+...+++++++++++ .+++++++||++|++.++++++.+ +
T Consensus 87 ~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~ 165 (439)
T 2oat_A 87 AVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN-YHKVLPMNTGVEAGETACKLARKWGYTVKGIQK 165 (439)
T ss_dssp TTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred cccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC-CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCC
Confidence 3579999999999999999874332 2456788999999999884 689999999999999999988643 2
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++++||+++++||+.+...+...+.+.....+. ....++..+|++|+++|+++++. +++++++++|+++++
T Consensus 166 g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~-------p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~ 236 (439)
T 2oat_A 166 YKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFG-------PFMPGFDIIPYNDLPALERALQD--PNVAAFMVEPIQGEA 236 (439)
T ss_dssp TCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSC-------SCCTTEEEECSSCHHHHHHHTTS--TTEEEEEECSSBTTT
T ss_pred CCCeEEEEcCCCCCCCHhHhhcCCChhcccCCC-------CCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCC
Confidence 447999999999999887776655322111110 01123566777799999999962 478999999999988
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~ 231 (368)
|.+.++++++++|+++|++||++||+||+|+|| +.|..+.++.+++.||++|+||++++| +|+|++++++++++.+..
T Consensus 237 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~ 316 (439)
T 2oat_A 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP 316 (439)
T ss_dssp TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC
Confidence 988888888999999999999999999999999 778777778889999999999999999 999999999998887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
..+.+|+++|+++++++.++++.+.++++.++++++++++++.|+++ ..+....+.+.+.++++.+....
T Consensus 317 ---~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l--~~~~~~~~~~~g~~~~v~l~~~~----- 386 (439)
T 2oat_A 317 ---GEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL--PSDVVTAVRGKGLLNAIVIKETK----- 386 (439)
T ss_dssp ---TSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS--CTTTEEEEEEETTEEEEEECCCS-----
T ss_pred ---CCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeeeeEEEEEEecCc-----
Confidence 34668899999999999999998877788899999999999988775 23333346677888888874210
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..+..++++.|+++||.+.+.+...+|+ ++.++++|+++++++|++++.++
T Consensus 387 ------~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 439 (439)
T 2oat_A 387 ------DWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILSF 439 (439)
T ss_dssp ------SCCHHHHHHHHHHTTEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ------cHHHHHHHHHHHHCCeEEecCCCCEEEEECccCCCHHHHHHHHHHHHHHHHhC
Confidence 0124689999999999999976555554 67889999999999999998764
No 27
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=1.7e-42 Score=319.80 Aligned_cols=338 Identities=24% Similarity=0.301 Sum_probs=270.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh------cCCc
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRE 76 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~------~~~~ 76 (368)
+++||.+|++++++.+++++.... .++.+...+++++++++++ .+++++++||++|++.++++++.+ ++++
T Consensus 69 ~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~ 147 (420)
T 2pb2_A 69 TALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF-AERVLFMNSGTEANETAFKLARHYACVRHSPFKT 147 (420)
T ss_dssp CTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS-CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred cccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC-CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCC
Confidence 689999999999999998774322 2467889999999999985 689999999999999999988654 4556
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
+||+++++||+....++...+.+.....+.+ ...++..++++|+++|+++++ +++++++++|+++++|.+
T Consensus 148 ~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p-------~~~~~~~~~~~d~~~le~~i~---~~~~~vi~~p~~~~gG~~ 217 (420)
T 2pb2_A 148 KIIAFHNAFHGRSLFTVSVGGQPKYSDGFGP-------KPADIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVQ 217 (420)
T ss_dssp EEEEETTCCCCSSHHHHHHSSCHHHHTTSSS-------CCSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSE
T ss_pred EEEEEeCCcCCcCHHHHHhcCCccccccCCC-------CCCCeEEecCCCHHHHHHHhc---cCceEEEEeCCcCCCCee
Confidence 8999999999998877776665322111100 112345566679999999997 479999999998877877
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
.++.+++++|+++|++||++||+||+|++| +.|..+..+.+++.||++||||++++|+|+|++++++++++.+.. .
T Consensus 218 ~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~sK~l~~G~~iG~~~~~~~l~~~l~~---~ 294 (420)
T 2pb2_A 218 AATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHV---G 294 (420)
T ss_dssp ECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECHHHHTTCC-----
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEecccccCCCceEEEEEhHHHHHhhcC---C
Confidence 788888999999999999999999999999 777766667788889999999999999999999999888777763 2
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
.+..++++|+++++++.++++.+.++++.++++++++++++.|+++....+......+.+.++++.+...
T Consensus 295 ~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~---------- 364 (420)
T 2pb2_A 295 SHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPK---------- 364 (420)
T ss_dssp --CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGG----------
T ss_pred CcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCC----------
Confidence 3567889999999999999998876678889999999999999886544454445667788888877421
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++.+.|+++||.+.+++...+|+ ++.++++|+++++++|++++++
T Consensus 365 -~~~~~~~l~~~l~~~Gi~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 365 -YKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -GTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHCCCEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 00124689999999999999986555554 4788999999999999998865
No 28
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.5e-42 Score=322.65 Aligned_cols=340 Identities=21% Similarity=0.258 Sum_probs=271.7
Q ss_pred eeccCCCcHHHH-H-HHHH---HHHcCCCC--CCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 4 LIILFPSYLQVL-A-ALGE---TMKKGTSF--GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 4 ~~~~g~~~~~v~-~-a~~~---~~~~~~~~--~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
++++||++|+|+ + ++.+ ++.+...+ .++.+...++++.++++++ +.+++++++||++|++.++++++.+.+
T Consensus 65 ~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~ 144 (449)
T 2cjg_A 65 SSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKS 144 (449)
T ss_dssp TCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhc
Confidence 368999999999 9 9999 87775433 2567889999999999985 678999999999999999988764432
Q ss_pred ------------CceEEEEcCCCCCCchhhhhhcCC-CccccCCCCCCCCCCCCCCcccccCCCC---------------
Q 017633 75 ------------RERIIKFEGCYHGHADPFLVKAGS-GVATLGLPDSPGVPKGATYETLTAPFND--------------- 126 (368)
Q Consensus 75 ------------~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d--------------- 126 (368)
+++||+++++||+.+...+...+. +.....+... ..+++.+|++|
T Consensus 145 ~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~ 217 (449)
T 2cjg_A 145 RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKF-------DWPRIDAPYMRPGLDEPAMAALEAEA 217 (449)
T ss_dssp HHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCC-------CCCEECCCCCCTTCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCC-------CCCcEEEcCCCchhhccccchhhHHH
Confidence 789999999999998877777664 1111111111 12334444444
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 205 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s 205 (368)
+++|++.++++.+++++++++|+++++|...++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.||+++
T Consensus 218 ~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t 297 (449)
T 2cjg_A 218 LRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVA 297 (449)
T ss_dssp HHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE
T ss_pred HHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEE
Confidence 345888887544689999999999888988999999999999999999999999999999 8787777778889999999
Q ss_pred hhhhccCCccceeeeehHHHHHHhcC--CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Q 017633 206 LGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 283 (368)
Q Consensus 206 ~sK~~~~G~~iG~v~~~~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 283 (368)
+||++ |+||+++++++++.+.. .....+++|+++|+++++++.++++.+.++++.+++++++++++++|+++..
T Consensus 298 ~sK~l----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~ 373 (449)
T 2cjg_A 298 FGKKT----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAA 373 (449)
T ss_dssp ECGGG----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcc----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 79999999888776332 1223466889999999999999999887778899999999999999998765
Q ss_pred hcCC-ceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHH
Q 017633 284 KAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITA 360 (368)
Q Consensus 284 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~ 360 (368)
..+. ...+.+.+.++++++. ......++++.|+++||.+.+++...+|+ ++.++++++++++++
T Consensus 374 ~~~~~~~~~~~~g~~~~~~~~-------------~~~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~ 440 (449)
T 2cjg_A 374 DFPAVVLDPRGRGLMCAFSLP-------------TTADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAA 440 (449)
T ss_dssp HSTTTSEEEEEETTEEEEECS-------------SHHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHH
T ss_pred hCCCceeeEeeccEEEEEEEC-------------ChHHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 5654 4456777888888763 22345789999999999999986555554 778999999999999
Q ss_pred HHHHHhh
Q 017633 361 AEKVLRQ 367 (368)
Q Consensus 361 l~~~l~~ 367 (368)
|++++.+
T Consensus 441 l~~~l~~ 447 (449)
T 2cjg_A 441 VRSALPV 447 (449)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
No 29
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=2.5e-43 Score=345.89 Aligned_cols=359 Identities=18% Similarity=0.252 Sum_probs=276.0
Q ss_pred eeccCCC-cHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHH-HHhc---
Q 017633 4 LIILFPS-YLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLA-RAFT--- 73 (368)
Q Consensus 4 ~~~~g~~-~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~-~~~~--- 73 (368)
++++||+ +|+|.+++.+++++..+. ++++++..+|+++|++..+ + .++++|++||++|++.|++++ +.+.
T Consensus 391 ~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~ 470 (831)
T 4a0g_A 391 TQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDH 470 (831)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhc
Confidence 5789999 999999999999885433 3567899999999999997 4 689999999999999999998 4442
Q ss_pred -----------CCceEEEEcCCCCCCchhhhhhcCCCccccC--CCCCCCCC-CCC--------CCcccccC--------
Q 017633 74 -----------GRERIIKFEGCYHGHADPFLVKAGSGVATLG--LPDSPGVP-KGA--------TYETLTAP-------- 123 (368)
Q Consensus 74 -----------~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~--------~~~~~~~~-------- 123 (368)
++.+||.+.++|||.+..++..++....... .+...+.. ... +...+..|
T Consensus 471 g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~ 550 (831)
T 4a0g_A 471 NFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAP 550 (831)
T ss_dssp TC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCS
T ss_pred CCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCcccccccc
Confidence 3568999999999999999999876433220 01000000 000 00000111
Q ss_pred ----CCC------------------HHHHHHHHH-----cCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCC
Q 017633 124 ----FND------------------VSALENLFE-----NNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGA 175 (368)
Q Consensus 124 ----~~d------------------~~~le~~~~-----~~~~~~~~~~~~~~-~~~~g~~~~~~~~l~~i~~l~~~~~~ 175 (368)
+++ .+.|++.+. +++++++++++||+ .+.+|.+.++++|+++|+++|++||+
T Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gi 630 (831)
T 4a0g_A 551 EYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKI 630 (831)
T ss_dssp STTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTC
T ss_pred ccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCC
Confidence 112 256777776 34568999999997 89999999999999999999999999
Q ss_pred EEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCCC---CccccccCCCCHHHHHH
Q 017633 176 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG---PMYQAGTLSGNPLAMTA 250 (368)
Q Consensus 176 ~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~a 250 (368)
+||+||+|+|| |+|..++++++++.||++|+||++++| +|+|++++++++++.+.... .+.+++||++|++++++
T Consensus 631 lLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aa 710 (831)
T 4a0g_A 631 PVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCAT 710 (831)
T ss_dssp CEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHH
T ss_pred eEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHH
Confidence 99999999999 999999999999999999999999988 79999999999999887532 35688999999999999
Q ss_pred HHHHHHHHccCCHHHHHHHHHHHHHH----HHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 251 GIHTLKRLKEPGTYEYLNKITGELTQ----GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~l~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
++++++.++++++.+++.++.+++++ .+.+.+.+.+....+.+.|.++++++...... ..++.....++.+
T Consensus 711 ala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~ 785 (831)
T 4a0g_A 711 AAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASN-----SGYASLYAKSLLI 785 (831)
T ss_dssp HHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC--------------CHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccc-----cccchHHHHHHHH
Confidence 99999999877777776665555543 44444556677778999999999998642110 0112344678999
Q ss_pred HHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHHhhC
Q 017633 327 GMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 327 ~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.|+++||++.+.+. .++ +++.++++|+++++++|+++++++
T Consensus 786 ~l~e~Gv~v~p~g~-~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 786 MLREDGIFTRPLGN-VIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHTTEECCCBTT-EEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHCCcEEEecCC-EEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999864 333 568889999999999999998753
No 30
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=1.8e-41 Score=315.96 Aligned_cols=352 Identities=21% Similarity=0.265 Sum_probs=269.9
Q ss_pred eccCCCcHHHHHHHHHHHHcCC--CC-CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc------C
Q 017633 5 IILFPSYLQVLAALGETMKKGT--SF-GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------G 74 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~--~~-~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~------~ 74 (368)
+++||.+|++++++.+++.+.. .+ +++.+...++++.++++++ +.+++++++||++|++.++++++.+. +
T Consensus 62 ~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~ 141 (449)
T 3a8u_X 62 CGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQAT 141 (449)
T ss_dssp CTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred ccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 6789999999999999987642 22 5677888999999999997 77899999999999999998876543 6
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccccCC--CC--------HHHHHHHHHcCC-CCeE
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPF--ND--------VSALENLFENNK-GEIA 142 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~d--------~~~le~~~~~~~-~~~~ 142 (368)
+++||+++++||+.....+...+.+.....+. ...++...........++ -| +++|+++++++. ++++
T Consensus 142 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~ 221 (449)
T 3a8u_X 142 KTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIA 221 (449)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEE
T ss_pred CCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 78999999999999877776655322111110 000100000000000000 04 899999997532 4789
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeee
Q 017633 143 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYG 220 (368)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~ 220 (368)
+++++|+++++|.+.++++++++|+++|++||++||+||+|++| +.|..+..+.+++.||++|+||++++| +|+|+++
T Consensus 222 ~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~ 301 (449)
T 3a8u_X 222 AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVI 301 (449)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEE
Confidence 99999998888988999999999999999999999999999988 777666677888889999999999988 9999999
Q ss_pred ehHHHHHHhcCC------CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 221 GRRDIMEMVAPA------GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 221 ~~~~~~~~~~~~------~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
+++++++.+... ....+.+|+++|+++++++.++++.+.++++.++++++.++++++|++ +...+....+.+.
T Consensus 302 ~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~~~~ 380 (449)
T 3a8u_X 302 ASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG-IKGAKNVIDIRNF 380 (449)
T ss_dssp EEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT-TTTSTTEEEEEEE
T ss_pred ECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HhcCCCeEEEeee
Confidence 999998887643 122456788999999999999999887778899999999999999987 3334444445677
Q ss_pred cceEEEEeecCCCcccchhcccccH--HHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETT--KFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.++++.+.... ... +..++.+.|+++||.+.+++ ..+|+ ++.++++++++++++|+++++++
T Consensus 381 g~~~~i~~~~~~----------~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 381 GLAGAIQIAPRD----------GDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp TTEEEEEECCBT----------TBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEecCc----------ccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 889898874311 001 23468999999999999876 45555 47899999999999999998753
No 31
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=5.3e-41 Score=308.94 Aligned_cols=339 Identities=24% Similarity=0.305 Sum_probs=279.1
Q ss_pred eeccCCCcHHHHHHHHHHHHcCCC--CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh------cCC
Q 017633 4 LIILFPSYLQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGR 75 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~------~~~ 75 (368)
.+++||++|++++++.+++.+... .+++.+...+++++++++++ .+++++++||++|++.++++++.+ +++
T Consensus 50 ~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~ 128 (406)
T 4adb_A 50 VNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF-ADRVFFCNSGAEANEAALKLARKFAHDRYGSHK 128 (406)
T ss_dssp TCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSS-CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred hcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCC-CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 378999999999999999877432 34567889999999999985 459999999999999999887654 566
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+.|++.+++||+.........+.......+. ....++..++++|+++|+++++ +++++++++|+++++|.
T Consensus 129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~p~np~g~~ 198 (406)
T 4adb_A 129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFA-------PLPADIRHAAYNDINSASALID---DSTCAVIVEPIQGEGGV 198 (406)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCGGGTGGGC-------SCCSSEEEECTTCHHHHHTTCS---TTEEEEEECSEETTTTS
T ss_pred cEEEEECCCcCCCcHHHhhccCCccccccCC-------CCCCCceEeCCCcHHHHHHHhc---CCeEEEEEeCCcCCCCC
Confidence 8999999999999888888777644322221 1123456677779999999887 57999999999888887
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+.++.+++++|+++|++||++||+||+|++| +.|..+..+.++..+|+++|||++++|+|+||+++++++++.+..
T Consensus 199 ~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~r~G~~~~~~~~~~~~~~--- 275 (406)
T 4adb_A 199 VPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTV--- 275 (406)
T ss_dssp EECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECHHHHHTCCT---
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEechhhcCCCCeEEEEEcHHHHhhhcc---
Confidence 7778888999999999999999999999998 777766777888899999999999999999999999999888873
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
..+..+++.++++++++.++++.+..+++.++++++++++++.|+++...........+.+.++++.+....
T Consensus 276 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------- 347 (406)
T 4adb_A 276 GTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADY-------- 347 (406)
T ss_dssp TSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTT--------
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCc--------
Confidence 345678899999999999999988667788899999999999999876655555566677888888874310
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|+++||.+.+++...+|+ ++.++++++++++++|++++++
T Consensus 348 ---~~~~~~~~~~l~~~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 348 ---AGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp ---TTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHCCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1135789999999999999987666665 7888999999999999998864
No 32
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=6.2e-41 Score=310.63 Aligned_cols=342 Identities=24% Similarity=0.310 Sum_probs=263.3
Q ss_pred eccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhc-----CC
Q 017633 5 IILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT-----GR 75 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~-----~~ 75 (368)
+++||.+|++++++.+++++... .+++.+...++++.++++++ +.+++++++||++|++.++++++.+. ++
T Consensus 55 ~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~ 134 (429)
T 1s0a_A 55 AIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEAR 134 (429)
T ss_dssp CTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCC
Confidence 68899999999999999876432 14466778999999999998 78999999999999999998765433 37
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCc-cccCC-CCCCCCCCCCCCcccccC---------CCCHHHHHHHHHcCCCCeEEE
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAP---------FNDVSALENLFENNKGEIAAI 144 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~---------~~d~~~le~~~~~~~~~~~~~ 144 (368)
++||+++++||++....+...+... ....+ +...+ ...+.++ ..|+++|++++++++++++++
T Consensus 135 ~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 208 (429)
T 1s0a_A 135 QRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPE------NLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV 208 (429)
T ss_dssp CEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCC------CEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred CeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCC------ceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEE
Confidence 8999999999998776666544211 00000 00000 0111111 137899999998644578999
Q ss_pred EEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeee
Q 017633 145 ILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGG 221 (368)
Q Consensus 145 ~~~~~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~ 221 (368)
+++|+ ++++|.+.++++++++|+++|++||++||+||+|++| +.|..+..+.++..||++++||++++| +|+||+++
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~ 288 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLT 288 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEE
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEe
Confidence 99999 8888988888899999999999999999999999998 766656667778889999999999999 99999999
Q ss_pred hHHHHHHhcCC--CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEE
Q 017633 222 RRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 299 (368)
Q Consensus 222 ~~~~~~~~~~~--~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (368)
++++++.+... +...+.+|+++|+++++++.++++.+.++++.+++++++++++++|+++.. .+....+.+.+.+++
T Consensus 289 ~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~~~~~g~~~~ 367 (429)
T 1s0a_A 289 TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGV 367 (429)
T ss_dssp CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CTTEEEEEEETTEEE
T ss_pred CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEeeEEEE
Confidence 99988887642 112355788999999999999999887777788888888888888876432 333333556677888
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.. ..+..++.+.|+++||.+.+.+ ..+|+ ++.++++|+++++++|++++++
T Consensus 368 ~~~~~-------------~~~~~~l~~~l~~~Gi~v~~~~-~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 368 VETTH-------------PVNMAALQKFFVEQGVWIRPFG-KLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp EEESS-------------CBCHHHHHHHHHHTTEECCCBT-TEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred EEECC-------------cccHHHHHHHHHHCCCEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 87632 1124678899999999999864 34554 4788999999999999998754
No 33
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=3e-40 Score=302.53 Aligned_cols=330 Identities=24% Similarity=0.306 Sum_probs=269.1
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--------cC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TG 74 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--------~~ 74 (368)
+++||.+|++++++.+++...... .++.+...++++++++.++ .+++++++||++|++.++++++.. ++
T Consensus 48 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~ 126 (392)
T 3ruy_A 48 VNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN-KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEAN 126 (392)
T ss_dssp CTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTT
T ss_pred hccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC-CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCC
Confidence 468999999999999998774332 2457788999999999986 789999999999999999887665 45
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
++.|++..++||+....+....+.......+. ....++..++++|+++++++++ +++++++++++++++|
T Consensus 127 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG 196 (392)
T 3ruy_A 127 RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFG-------PMLPGIIVIPYGDLEALKAAIT---PNTAAFILEPIQGEAG 196 (392)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCSCTTTTTTCC-------SCCSSEEEECTTCHHHHHHHCC---TTEEEEEECSSBSTTT
T ss_pred CcEEEEEcCCcCCCCHhhhhccCChhhccccC-------CCCCCCeeeCcccHHHHHHHhc---cCeEEEEEeCccCCCC
Confidence 77999999999999888877766533221111 1112345667779999999997 5799999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC-ccceeeeehHHHHHHhcCC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~~~~~~~~~ 232 (368)
.+.++++++++|+++|++||++||+||+|++| +.|..+..+.++..+|+++|||+++|| +|+||+++++++++.+..
T Consensus 197 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~- 275 (392)
T 3ruy_A 197 INIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP- 275 (392)
T ss_dssp SBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT-
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc-
Confidence 99999999999999999999999999999988 777777777888899999999999988 999999999988887763
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccch
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
..+..+++.++++++++.++++.+..+++.++++++++++++.|+++. .+......+.+.++++.+..
T Consensus 276 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~g~~~~~~~~~-------- 343 (392)
T 3ruy_A 276 --GSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEID--NPMITEVRGKGLFIGIELNE-------- 343 (392)
T ss_dssp --TSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCC--CTTEEEEEEETTEEEEEESS--------
T ss_pred --CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhc--CCCceEEEeeeeEEEEEEcc--------
Confidence 346678899999999999999987667788888888888888887642 13334555667888877631
Q ss_pred hcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
+..++.+.|+++||.+.+++...+|+ ++..+++++++++++|++++
T Consensus 344 -------~~~~l~~~l~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 344 -------PARPYCEQLKAAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp -------CSHHHHHHHHTTTEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHCCcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 23688999999999999987666665 47889999999999999886
No 34
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.6e-40 Score=305.34 Aligned_cols=330 Identities=25% Similarity=0.343 Sum_probs=253.2
Q ss_pred eccCCC-cHHHHHHHHHHHHcCCCC---CCCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 5 IILFPS-YLQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 5 ~~~g~~-~~~v~~a~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
+++||. +|++++++.+++.+...+ .++++...++++.++++++ + .+++++++||++|++.++++++.++ +++|
T Consensus 54 ~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~-~~~v 132 (419)
T 2eo5_A 54 NNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTG-RKYI 132 (419)
T ss_dssp TTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTS-CCEE
T ss_pred hccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhh-CCcE
Confidence 579998 999999999998765332 2667888999999999998 4 6899999999999999998876544 7899
Q ss_pred EEEcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCC---------------------CHHHHH-HHHH
Q 017633 79 IKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFN---------------------DVSALE-NLFE 135 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------d~~~le-~~~~ 135 (368)
|+++++||+.....+...+.. .....+... ...+..++.+ |+++|+ ++++
T Consensus 133 i~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~ 205 (419)
T 2eo5_A 133 IAFLGGFHGRTFGSISLTASKAVQRSIVGPF-------MPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFV 205 (419)
T ss_dssp EEETTCCCCSSHHHHHHCCSCGGGGCSSCCC-------CTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHH
T ss_pred EEECCCcCCCCHhhHhhcCCccccccccCCC-------CCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 999999999988777765542 111111000 0011111111 477888 8887
Q ss_pred cCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccC
Q 017633 136 NNK--GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG 212 (368)
Q Consensus 136 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~ 212 (368)
++. +++++++++|+++++|.+.++++++++|+++|++||++||+||+|++| +.|..+..+.++..||++||||++++
T Consensus 206 ~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~ 285 (419)
T 2eo5_A 206 NLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGG 285 (419)
T ss_dssp HTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGT
T ss_pred hccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccC
Confidence 421 368899999998888888888999999999999999999999999999 77766666778889999999999999
Q ss_pred C-ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 017633 213 G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 291 (368)
Q Consensus 213 G-~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 291 (368)
| +|+||++++++++ .+ . ..+.+|++.|+++++++.++++.+.+ +.++++++++++++.|.++ ...+
T Consensus 286 G~~riG~~~~~~~~~-~~-~---~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L~~~------~~~~ 352 (419)
T 2eo5_A 286 GIMPIGATIFRKDLD-FK-P---GMHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQGL------ADDV 352 (419)
T ss_dssp TTSCCEEEEEEGGGC-CC----------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTS------SSEE
T ss_pred CccceEEEEEchHhh-cC-C---cccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh------hhhe
Confidence 9 9999999988876 55 2 23557889999999999999987653 7777888888877777553 2245
Q ss_pred eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 292 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.+.+.++++++.. ...... +++.|+++||.+++++...+|+ ++.++++++++++++|+++++++
T Consensus 353 ~~~g~~~~i~~~~------------~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 353 RGIGLAWGLEYNE------------KKVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EEETTEEEEECSC------------HHHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EeeeEEEEEEEec------------CccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6678888887621 112345 8899999999999976555555 66889999999999999998753
No 35
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=3.8e-39 Score=298.46 Aligned_cols=348 Identities=27% Similarity=0.386 Sum_probs=266.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCC---CCCCChhHHHHHHHHHhhCCC-C-CeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 5 IILFPSYLQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~-~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
+++||.+|++++++.+++..... .+++.+...+|++.+++++++ . +++++++||++|++.++++++.+.+++.|+
T Consensus 53 ~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~~vi 132 (426)
T 1sff_A 53 LNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTI 132 (426)
T ss_dssp CTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCCeEE
Confidence 37899999999999999876322 235678899999999999943 4 899999999999999998654444555899
Q ss_pred EEcCCCCCCchhhhhhcCCCc-cccCCCCCCCCCCCCCCcccccCC-----C-----CHHHHHHHHHc--CCCCeEEEEE
Q 017633 80 KFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF-----N-----DVSALENLFEN--NKGEIAAIIL 146 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~-----d~~~le~~~~~--~~~~~~~~~~ 146 (368)
+.+++||+.....+...+... ....+.. ....+..++. + |+++|++++++ ++++++++++
T Consensus 133 ~~~p~y~~~~~~~~~~~g~~~~~~~~~~~-------~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~ 205 (426)
T 1sff_A 133 AFSGAYHGRTHYTLALTGKVNPYSAGMGL-------MPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVI 205 (426)
T ss_dssp EETTCCCCSSHHHHHHSSCCTTTTTTSCC-------CCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred EECCCcCCCchHhhhhcCCccccccccCC-------CCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEE
Confidence 999999998876666655421 0000000 0001111121 1 68899999874 1247889999
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHH
Q 017633 147 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 147 ~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~ 225 (368)
+|+++++|...++++++++|+++|++||++||+||+|++| +.|..+..+.++..+|+.||||++++|+|+||+++++++
T Consensus 206 ~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~GlriG~~~~~~~~ 285 (426)
T 1sff_A 206 EPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEV 285 (426)
T ss_dssp CSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSSCCEEEEEEHHH
T ss_pred ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCCCceEEEEEcHHH
Confidence 9998888878999999999999999999999999999998 767666667778889999999999999999999999988
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
++.+.. ..+..+++.|+++++++.++++.+.++++.+++++++++++++|.++....+......+.+.++|+.+...
T Consensus 286 ~~~l~~---~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 362 (426)
T 1sff_A 286 MDAVAP---GGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFED 362 (426)
T ss_dssp HTTSCT---TSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGG
T ss_pred Hhhhcc---CCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecC
Confidence 887763 23557888999999999999998877788999999999999999887544554334455688889887431
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCC--CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. ...+...+..++++.|+++||.+.+++ ...+|+ ++.++++++++++++|++++.+
T Consensus 363 ~~-----~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 363 GD-----HNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp GC-----TTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cc-----ccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 10 000123456789999999999999876 334555 4578999999999999998864
No 36
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=1.3e-39 Score=304.25 Aligned_cols=341 Identities=18% Similarity=0.243 Sum_probs=256.5
Q ss_pred eeccCCCcHHHHHHHHHHHHc-----CCCCCC--CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh---
Q 017633 4 LIILFPSYLQVLAALGETMKK-----GTSFGA--PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--- 72 (368)
Q Consensus 4 ~~~~g~~~~~v~~a~~~~~~~-----~~~~~~--~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--- 72 (368)
.+++||++|+|++++.+++.. ...++. ..++..++++.+++.++ +.++++|++||++|++.|+++++.+
T Consensus 74 ~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~ 153 (472)
T 1ohv_A 74 SIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRS 153 (472)
T ss_dssp TCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhh
Confidence 357999999999999987643 122221 24566666666777776 6789999999999999999988643
Q ss_pred ---------------------cC--CceEEEEcCCCCCCchhhhhhcCCCccc-cCCCCCCCCCCCCCCccccc------
Q 017633 73 ---------------------TG--RERIIKFEGCYHGHADPFLVKAGSGVAT-LGLPDSPGVPKGATYETLTA------ 122 (368)
Q Consensus 73 ---------------------~~--~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------ 122 (368)
++ +++||+++++|||++..++..++.+... ...+.. .+... ..+....
T Consensus 154 ~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~-~~~~~-~~p~~~~~~~~~~ 231 (472)
T 1ohv_A 154 KERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSF-DWPIA-PFPRLKYPLEEFV 231 (472)
T ss_dssp HHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCC-CCCEE-CCCCCCSSGGGCH
T ss_pred hccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCC-CCccc-CCCcccCcccccc
Confidence 12 4899999999999999888887654221 111110 00000 0000111
Q ss_pred CCC------CHHHHHHHHHcCCC---CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCc
Q 017633 123 PFN------DVSALENLFENNKG---EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 192 (368)
Q Consensus 123 ~~~------d~~~le~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~ 192 (368)
+++ |+++|+++++.+.+ ++++++++|+++++|.+.++++|+++|+++|++||++||+||+|+|| +.|..+
T Consensus 232 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~ 311 (472)
T 1ohv_A 232 KENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFW 311 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred ccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCch
Confidence 111 58899999985212 78999999999999999999999999999999999999999999998 777767
Q ss_pred cccccCCC--cchhhhhhh-ccCCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHH
Q 017633 193 AQEYFGVT--PDLTTLGKI-IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 269 (368)
Q Consensus 193 ~~~~~~~~--~di~s~sK~-~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 269 (368)
.++.+++. ||+.||||+ ++|| +++ ++++ .......+++|+++|+++++++.++++.+.++++.+++++
T Consensus 312 ~~~~~gv~~~~Di~t~sK~~l~GG----~~~-~~~~----~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 382 (472)
T 1ohv_A 312 AHEHWGLDDPADVMTFSKKMMTGG----FFH-KEEF----RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAH 382 (472)
T ss_dssp GGGGGCCSSCCSEEEECGGGSSEE----EEE-CGGG----SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hccccCCCCCCCEEEEccccccCC----ccC-chhh----cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 78888886 999999999 6654 434 4443 1122455678899999999999999998877889999999
Q ss_pred HHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cc
Q 017633 270 ITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TS 346 (368)
Q Consensus 270 ~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~ 346 (368)
++++++++|+++...++ ....+.+.+.++++++. ......++++.|+++||.+.+++...+| ++
T Consensus 383 ~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~-------------~~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~ 449 (472)
T 1ohv_A 383 AGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTP-------------DESIRNKLISIARNKGVMLGGCGDKSIRFRPT 449 (472)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECS-------------SHHHHHHHHHHHHHTTEECEEETTTEEEECCC
T ss_pred HHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeC-------------ChhHHHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence 99999999998755554 24456677888888652 2234578999999999999987655555 47
Q ss_pred cCCCHHHHHHHHHHHHHHHhhC
Q 017633 347 LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 347 ~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.++++|+++++++|++++.++
T Consensus 450 ~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 450 LVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999998764
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=1.5e-38 Score=291.68 Aligned_cols=335 Identities=26% Similarity=0.323 Sum_probs=261.9
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh-----cCCce
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRER 77 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~-----~~~~~ 77 (368)
+++|+.+|++++++.+++...... .++.+...+++++++++++ .+++++++||++|++.++++++.+ +++++
T Consensus 52 ~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~ 130 (397)
T 2ord_A 52 NVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF-GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYR 130 (397)
T ss_dssp CTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT-SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred cccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCce
Confidence 688999999999999998774221 2456788999999999985 689999999999999999877543 35678
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
|++++++||+.....+...+.+.....+ |.. ..+..++++|+++|++.++ ++++++++++.++++|.+
T Consensus 131 vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~--------~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~ 199 (397)
T 2ord_A 131 ILSAHNSFHGRTLGSLTATGQPKYQKPFEPLV--------PGFEYFEFNNVEDLRRKMS---EDVCAVFLEPIQGESGIV 199 (397)
T ss_dssp EEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCC--------TTEEEECTTCHHHHHHHCC---TTEEEEEECSEECTTTCE
T ss_pred EEEEcCCcCCCchhhhhccCChhhccccCCCC--------CCeeEecCCCHHHHHHHhh---cCeEEEEEecccCCCCcc
Confidence 9999999999887666655543111111 111 1245566679999999987 478999999988888885
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 235 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~ 235 (368)
.++.+++++|+++|++||++||+||+|+++ +.|.......++..+|++||||++++|+|+||++++++++ .+.. .
T Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~r~G~~~~~~~~~-~l~~---~ 275 (397)
T 2ord_A 200 PATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGVPIGAVIVNERAN-VLEP---G 275 (397)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECSTTC-CCCT---T
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCeeeeccccCCCcCeEEEEEchHhc-ccCC---C
Confidence 666777999999999999999999999988 6665555566777789999999999999999999988765 5442 2
Q ss_pred cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcc
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 315 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (368)
.+..+++.++++++++.++++.+.++++.++++++++++++.|++.....+......+.+.++++.+..
T Consensus 276 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~----------- 344 (397)
T 2ord_A 276 DHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFRE----------- 344 (397)
T ss_dssp SSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT-----------
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECC-----------
Confidence 355678899999999999999887777889999999999999988643444333445667888887632
Q ss_pred cccHHHHHHHHHHHHcCeeecCCCCCccccc--cCCCHHHHHHHHHHHHHHHhhC
Q 017633 316 SETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 316 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~--~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..+..++.+.|+++||.+.+++...+|++ +..+++++++++++|+++++++
T Consensus 345 --~~~~~~l~~~l~~~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 397 (397)
T 2ord_A 345 --EVSNREVATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQGI 397 (397)
T ss_dssp --TSCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred --hHHHHHHHHHHHHCCCEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHhhC
Confidence 11247889999999999999865555654 6789999999999999998763
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=7.4e-38 Score=286.92 Aligned_cols=330 Identities=29% Similarity=0.370 Sum_probs=258.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCC--CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 5 IILFPSYLQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+++|+.+|++++++.+++...... .++.+...+++++++++++ +.+++++++||++|+..+++.++.+.++++||++
T Consensus 57 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~ 136 (395)
T 1vef_A 57 ANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAA 136 (395)
T ss_dssp CTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 678999999999999998764321 2467889999999999997 6789999999999999999876544567889999
Q ss_pred cCCCCCCchhhhhhcCCCccccC-CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
+++||+.....+...+....... .+. ..++..+++.|+++++++++ +++++++++|+++++|.+.+++
T Consensus 137 ~~~y~~~~~~~~~~~g~~~~~~~~~p~--------~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~~~ 205 (395)
T 1vef_A 137 MRGFSGRTMGSLSVTWEPKYREPFLPL--------VEPVEFIPYNDVEALKRAVD---EETAAVILEPVQGEGGVRPATP 205 (395)
T ss_dssp TTCCCCSSHHHHHTCCCHHHHGGGCSC--------SSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCH
T ss_pred cCCcCCCchhhhhhcCCcccccccCCC--------CCCeeEeCCCcHHHHHHHhc---cCEEEEEEeCccCCCCccCCCH
Confidence 99999987766665544321100 111 11234445568999999997 4789999999988889888899
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccc
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~ 239 (368)
+++++|+++|++||++||+||+|+++ +.|..+..+.++..+|++||||++++|+|+||+++++++++.+.. ..+..
T Consensus 206 ~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~~~G~~~~~~~~~~~l~~---~~~~~ 282 (395)
T 1vef_A 206 EFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPK---GGHGT 282 (395)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEEEEEHHHHHTSCT---TSSCC
T ss_pred HHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCCCceEEEEehHHHHhhhcc---CCcCC
Confidence 99999999999999999999999988 556555556677788999999999999999999998888887764 22456
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
+++.++++++++.++++.+.++++.++++++++++++.|+++.. +......+.+.++++.+.. .
T Consensus 283 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~g~~~~~~~~~-------------~- 346 (395)
T 1vef_A 283 TFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS--PKIREVRGMGLMVGLELKE-------------K- 346 (395)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC--TTEEEEEEETTEEEEEESS-------------C-
T ss_pred CcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc--CceEEEEEEEEEEEEEEcC-------------h-
Confidence 77889999999999998876566778888888888888766421 2222345567788887631 1
Q ss_pred HHHHHHHHHH-HcCeeecCCCCCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 320 KFARFYRGML-EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 320 ~~~~~~~~l~-~~Gi~~~~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
..++.+.|+ ++||.+.+++...+|+ ++..+++++++++++|++++
T Consensus 347 -~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 347 -AAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp -SHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 367899999 9999999976556665 55789999999999999876
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=5.1e-36 Score=272.80 Aligned_cols=326 Identities=26% Similarity=0.343 Sum_probs=250.4
Q ss_pred eccCCCcHHHHHHHHHHHHcCC--CCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh----c-CCce
Q 017633 5 IILFPSYLQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF----T-GRER 77 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~----~-~~~~ 77 (368)
+++||.+|++++++.+++.+.. ...++.+...+++++++++++-++++++++||++|+..++++++.+ . ++++
T Consensus 40 ~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~ 119 (375)
T 2eh6_A 40 NSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWK 119 (375)
T ss_dssp CTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred cccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCE
Confidence 5788899999999999887631 1234667789999999999863389999999999999999765333 2 3489
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
|++.+++||++...+....+.......+... ..++..+++.|+++|+++++ +++++++++|+++++|.+.
T Consensus 120 vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~ 189 (375)
T 2eh6_A 120 FISFENSFHGRTYGSLSATGQPKFHKGFEPL-------VPGFSYAKLNDIDSVYKLLD---EETAGIIIEVIQGEGGVNE 189 (375)
T ss_dssp EEEEBTCCCCSSHHHHHHCBCGGGTTTTCSC-------CSSEEEECTTCHHHHHTTCC---TTEEEEEECSEETTTTSEE
T ss_pred EEEECCCcCCCchhhhhhcCCccccCCCCCC-------CCCceeCCCchHHHHHHHhc---CCeEEEEEeCccCCCCCcC
Confidence 9999999999988777665553211111000 11244455568999998887 4789999999888889888
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
++++++++|+++|++||+++|+||+|++| +.+..+..+.++..+|+++|||.+++|+|+||+++++++++.+.. ..
T Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~SK~~~~g~~~G~~~~~~~~~~~~~~---~~ 266 (375)
T 2eh6_A 190 ASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTP---GS 266 (375)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSCCEEEEEEHHHHTTCCT---TS
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEcccccCCCCeEEEEEcHHHHhhhcC---CC
Confidence 98999999999999999999999999988 555444556677778999999999999999999999888877763 22
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
+..++++++++++++.++++.+. ++.++++++++++++.|+++ +. ....+.+.++++.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~~~~------------ 327 (375)
T 2eh6_A 267 HGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKEL----GK-GKVKGRGLMLGLELER------------ 327 (375)
T ss_dssp CCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHT----TS-SEEEEETTEEEEECSS------------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH----hc-CCceEEEEEEEEEEcC------------
Confidence 45677889999999988888764 56677777777777777663 22 2345667888887631
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCCCccccc--cCCCHHHHHHHHHHHHHHH
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~--~~~~~~~i~~~~~~l~~~l 365 (368)
+..++++.|+++||.+.+++...+|++ ...+++++++++++|++++
T Consensus 328 ---~~~~~~~~l~~~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 328 ---ECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp ---CCHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred ---cHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 136788999999999998765556654 5789999999999998764
No 40
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.9e-32 Score=251.60 Aligned_cols=343 Identities=13% Similarity=0.037 Sum_probs=226.9
Q ss_pred ccCCCcHHHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhc
Q 017633 6 ILFPSYLQVLAALGETMKKG----TSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~ 73 (368)
.++ .+|++++++.+++... ..|+ ......++++.+++++ + +.+ ++++++||++|++.+++.+ ..
T Consensus 48 ~~~-~~~~v~~a~~~~~~~~~~~~~~y~-~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~--~~ 123 (429)
T 1yiz_A 48 DYH-APKYALNALAAAANSPDPLANQYT-RGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH--VD 123 (429)
T ss_dssp SSC-CCHHHHHHHHHHHTCSCGGGGSCC-CSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH--CC
T ss_pred CCC-CCHHHHHHHHHHHhccccCccCCC-CCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHh--cC
Confidence 345 5789999999988752 2222 2223455666666553 3 467 9999999999999999876 34
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
+++.|++..++||+..... ...|..+...+....... .......+ .|++++++.++ ++++++++++.+++
T Consensus 124 ~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~np 194 (429)
T 1yiz_A 124 EGDEVIIIEPFFDCYEPMV-KAAGGIPRFIPLKPNKTG-----GTISSADWVLDNNELEALFN---EKTKMIIINTPHNP 194 (429)
T ss_dssp TTCEEEEEESCCTTHHHHH-HHTTCEEEEEECBCCCSS-----SSEEGGGCBCCHHHHHHHCC---TTEEEEEEESSCTT
T ss_pred CCCEEEEcCCCchhHHHHH-HHcCCEEEEEeCCccccc-----ccccccCcccCHHHHHHHhc---cCceEEEECCCCCC
Confidence 5789999999999865443 333433322211111000 00000011 28999999886 46788877776666
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-Ccccc----ccCCCcchhhhhhhcc-CCccceeeeehHHH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQE----YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 225 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~----~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~ 225 (368)
+|.+. +++++++|+++|++||+++|+||+|+++ +.|. ...+. ..+..+++.|+||.++ +|+|+||+++++++
T Consensus 195 tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~ 273 (429)
T 1yiz_A 195 LGKVM-DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEAL 273 (429)
T ss_dssp TCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHH
T ss_pred CCccC-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHH
Confidence 77665 5666999999999999999999999987 5443 11221 2334556779999999 79999999999998
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHH-----HccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-----LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
++.+.. .....+++.++++++++.++++. ...+++.++.+++.+..++.+.+.+.+.+.....+..+.++|+
T Consensus 274 ~~~l~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~ 350 (429)
T 1yiz_A 274 LKNLQM---VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVA 350 (429)
T ss_dssp HHHHHH---HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEE
T ss_pred HHHHHH---HHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEE
Confidence 887762 23446778899999999888886 3225555665555555555665555444554333445667888
Q ss_pred EeecCCCcc-cchhcccccHHHHHHHHHHH-HcCeeecCCC-----------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 301 FFTEGPVYN-FEDAKKSETTKFARFYRGML-EEGVYFAPSQ-----------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 301 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+....... +.. .....+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 351 ~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 351 DWSSLDSKVDLTQ--ETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp ECCSSCTTTTCCS--SSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred Ecccccccccccc--cccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 774310000 000 000124567888887 7899998863 2345677677999999999999998764
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.7e-32 Score=251.04 Aligned_cols=328 Identities=12% Similarity=0.036 Sum_probs=222.4
Q ss_pred cCCCcHHHHHHHHHHHHcCCC-CC-CCChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 7 LFPSYLQVLAALGETMKKGTS-FG-APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~-~~-~~~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..+.+|++++++.+++..... |. ...+...++++++++.++ +.+++++++||++|++.+++.+ ..+++.|++.
T Consensus 72 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~--~~~gd~Vi~~ 149 (421)
T 3l8a_A 72 DFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF--SEKGDAVLIN 149 (421)
T ss_dssp CSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH--SCTEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh--cCCCCEEEEC
Confidence 334789999999999876322 21 234567777777777665 5789999999999999999877 3467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++||+........ +..+...++....+ .+. .|+++|++++++ +++++++++++++++|. ..+++
T Consensus 150 ~~~y~~~~~~~~~~-g~~~~~~~~~~~~~--------~~~---~d~~~le~~i~~--~~~~~vil~~p~nptG~-~~~~~ 214 (421)
T 3l8a_A 150 SPVYYPFARTIRLN-DHRLVENSLQIING--------RFE---IDFEQLEKDIID--NNVKIYLLCSPHNPGGR-VWDND 214 (421)
T ss_dssp ESCCHHHHHHHHHT-TEEEEEEECEEETT--------EEE---CCHHHHHHHHHH--TTEEEEEEESSBTTTTB-CCCHH
T ss_pred CCCcHHHHHHHHHC-CCEEEeccccccCC--------Cee---eCHHHHHHHhhc--cCCeEEEECCCCCCCCC-cCCHH
Confidence 99999865544433 33222111110000 000 189999999974 36888888888777785 44555
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc-----cccCCCcchhhhhhhcc-CCccceeeeeh-HHHHHHhcCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-----EYFGVTPDLTTLGKIIG-GGLPVGAYGGR-RDIMEMVAPA 232 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~-----~~~~~~~di~s~sK~~~-~G~~iG~v~~~-~~~~~~~~~~ 232 (368)
++++|+++|++||++||+||+|+++ +.|.. ..+ +..+..+++.|+||+++ +|+|+|+++++ +++++.+...
T Consensus 215 ~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~ 294 (421)
T 3l8a_A 215 DLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYR 294 (421)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHH
Confidence 5999999999999999999999988 65532 111 12344566889999998 89999999887 8888877631
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-eEEEEeecCCCcccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFE 311 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 311 (368)
.....++++|+++++++.++++.. +++.+++.+..+..++.+.+.+.+.+......+.+. +.|+++...
T Consensus 295 --~~~~~~~~~n~~~~~a~~aal~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~------ 364 (421)
T 3l8a_A 295 --QLANNQHEVPTVGMIATQAAFQYG--KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY------ 364 (421)
T ss_dssp --HHHTTCSCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGG------
T ss_pred --HHhcccCCCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEecccc------
Confidence 112344578999999999998743 334444444444444444444443332233444444 445666321
Q ss_pred hhcccccHHHHHHHHHHHH-cCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|++ +||.+.++. ...+|+++.++++++++++++|++++++
T Consensus 365 ------~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 421 (421)
T 3l8a_A 365 ------AIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFGK 421 (421)
T ss_dssp ------TCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred ------CCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhC
Confidence 1123678888975 599998853 2446777778999999999999998753
No 42
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=4.4e-32 Score=252.02 Aligned_cols=322 Identities=14% Similarity=0.115 Sum_probs=216.0
Q ss_pred CCcHHHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhC----C--CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 9 PSYLQVLAALGETMKKG----TSFGAPCLLENVLAEMVISAV----P--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~----~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
+.++++.+++.+++.+. ..| .+.....+|++++++++ + +.+++++|+||++|+..+++.+ ..++|.|
T Consensus 91 ~p~~~v~~a~~~~l~~~~~~~~~Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l--~~~Gd~V 167 (448)
T 3aow_A 91 FPKEIIRDILVEIMEKYADKALQY-GTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVF--LNPGDIV 167 (448)
T ss_dssp SCHHHHHHHHHHHHHHSHHHHHSC-CCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHH--CCTTCEE
T ss_pred CCHHHHHHHHHHHHHhhhHHHhCC-CCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHH--cCCCCEE
Confidence 35668999998888653 123 23344567777777766 5 4689999999999999999877 3467899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHH----cCCCCeEEEEEcccCCC-C
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE----NNKGEIAAIILEPVVGN-S 153 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~----~~~~~~~~~~~~~~~~~-~ 153 (368)
++..++|++....+.. .|..+...+... .+ .|+++|+++++ +. .+++++++.|+.+| +
T Consensus 168 lv~~p~y~~~~~~~~~-~g~~~~~v~~~~-~g--------------~d~~~L~~~l~~~~~~~-~~~k~v~~~~~~~NPt 230 (448)
T 3aow_A 168 VVEAPTYLAALQAFNF-YEPQYIQIPLDD-EG--------------MKVEILEEKLKELKSQG-KKVKVVYTVPTFQNPA 230 (448)
T ss_dssp EEEESCCHHHHHHHHT-TCCEEEEEEEET-TE--------------ECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTT
T ss_pred EEeCCChHHHHHHHHH-cCCEEEEeccCC-CC--------------CCHHHHHHHHhhhhccC-CCCeEEEECCCCCCCc
Confidence 9999999886544332 233222111110 11 18999999997 42 36788766666555 4
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC----ccccccCCCcchhhhhhhccCCccceeeeehHHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG----GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~----~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
|. ..+.+++++|+++|++||+++|+||+|.++ +.|.. ...+..+..+++.||||.+++|+|+||+++++++++.
T Consensus 231 G~-~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~ 309 (448)
T 3aow_A 231 GV-TMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRK 309 (448)
T ss_dssp CC-CCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHH
Confidence 54 456677999999999999999999999887 54431 1222234456778999999999999999999999888
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc---CCceEEeeccceEEEEeecC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA---GHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 305 (368)
+.. .....+++.|++++.++.++++...-+++.+++++..+..++.+.+.+.+. +.....+..+.++|+.+..
T Consensus 310 l~~---~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~- 385 (448)
T 3aow_A 310 MEI---AKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD- 385 (448)
T ss_dssp HHH---HHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECST-
T ss_pred HHH---HHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCC-
Confidence 763 234456677999999888887632001223333333333333343333332 2322233446677877631
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--------CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--------EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--------~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|+++||.+.++.. ..+|+++.. +++++++++++|++++++
T Consensus 386 ------------~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 386 ------------GIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp ------------TCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHH
T ss_pred ------------CCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 12347899999999999998632 235665544 799999999999998864
No 43
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=248.68 Aligned_cols=341 Identities=12% Similarity=0.070 Sum_probs=220.5
Q ss_pred CcHHHHHHHHHHHHc-CCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKK-GTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|.+++++.+++.. ....+.+.....++++++++++ + +++++++|+||++|+..+++.+ ..+++.|++.
T Consensus 71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l--~~~gd~Vlv~ 148 (447)
T 3b46_A 71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGL--LNAGDEVIVF 148 (447)
T ss_dssp CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHH--cCCCCEEEEe
Confidence 468899999998875 2222223333455666666553 3 3478999999999999999876 3467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCC-CCCCCCCCcccccCC-CCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
.+.|++..... ...|..+...+..... +.. .......+ .|+++|+++++ ++++++++++.+|++|.+.+
T Consensus 149 ~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~----~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~- 219 (447)
T 3b46_A 149 EPFFDQYIPNI-ELCGGKVVYVPINPPKELDQ----RNTRGEEWTIDFEQFEKAIT---SKTKAVIINTPHNPIGKVFT- 219 (447)
T ss_dssp ESCCTTHHHHH-HHTTCEEEEEEEECCGGGGT----SCBCSTTSEECHHHHHTTCC---TTEEEEEEESSCTTTCCCCC-
T ss_pred CCCchhHHHHH-HHcCCEEEEEeCCCcccccc----ccccccCcccCHHHHHHhhc---cCCeEEEEeCCCCCCCcccC-
Confidence 99998865443 3334333221111110 000 00000011 18999998886 46787777766666776654
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccc-----cccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-----EYFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAP 231 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~-----~~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~ 231 (368)
.+++++|+++|++||+++|+||+|.++ +.+..... +.++..+.+.|+||.++ +|+|+||+++ ++++++.+..
T Consensus 220 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~ 299 (447)
T 3b46_A 220 REELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAK 299 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHH
Confidence 566999999999999999999999987 54422111 12455666789999999 8999999999 9998887762
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc-c
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN-F 310 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 310 (368)
..+..+++.++++++++.++++....+++.++++++.+..++.+.+.+.+.++....+..+.++|+.+....... .
T Consensus 300 ---~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~ 376 (447)
T 3b46_A 300 ---AHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDY 376 (447)
T ss_dssp ---HHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTC
T ss_pred ---HHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCcccc
Confidence 334467788999999988888865334444444444444444444444444544444555677787764210000 0
Q ss_pred c-hhcccccHHHHHHHHHHH-HcCeeecCCC-----------CCccccccCCCHHHHHHHHHHHHHH
Q 017633 311 E-DAKKSETTKFARFYRGML-EEGVYFAPSQ-----------FEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 311 ~-~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
. ........+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 377 PYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp CCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred ccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 0 000000124568888887 5799998873 2345777778999999999999873
No 44
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-31 Score=241.66 Aligned_cols=312 Identities=13% Similarity=0.069 Sum_probs=222.2
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
.+|++++++.+++.....++++.....+++++++++++ ..+++++++||++++..+++.+ ..+++.|++..++|++
T Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~Vl~~~~~~~~ 121 (367)
T 3euc_A 44 LPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAA--ARPGAKVMAPVPGFVM 121 (367)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHT--CCTTCEEEEEESCSCC
T ss_pred CCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHH--cCCCCEEEEcCCCHHH
Confidence 78899999999887532334455567899999999986 4579999999999999999866 3467899999999998
Q ss_pred CchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 017633 88 HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
........ |..+...+......+ |+++++++++++ +++++++++.++++|.+.+ .+.+++|+
T Consensus 122 ~~~~~~~~-g~~~~~v~~~~~~~~--------------d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~-~~~l~~i~ 183 (367)
T 3euc_A 122 YAMSAQFA-GLEFVGVPLRADFTL--------------DRGAMLAAMAEH--QPAIVYLAYPNNPTGNLFD-AADMEAIV 183 (367)
T ss_dssp SCHHHHTT-TCEEEEEECCTTSCC--------------CHHHHHHHHHHH--CCSEEEEESSCTTTCCCCC-HHHHHHHH
T ss_pred HHHHHHHc-CCeEEEecCCCCCCC--------------CHHHHHHHhhcc--CCCEEEEcCCCCCCCCCCC-HHHHHHHH
Confidence 76554333 332222111111111 899999999853 5667776666666776665 44499999
Q ss_pred HHHHHh--CCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 168 RITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 168 ~l~~~~--~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
++|++| |+++|+||+|++| ..+.....+..+..+++.|+||...+|+|+||+++++++++.+.... .+++.+
T Consensus 184 ~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~-----~~~~~~ 258 (367)
T 3euc_A 184 RAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVR-----PPYNVN 258 (367)
T ss_dssp HHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGC-----CSSCCC
T ss_pred HhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHHHHHHHHHhC-----CCCCCC
Confidence 999999 9999999999887 33332333444455667899999337899999999999988887422 356789
Q ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 245 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
+++++++.++++. .++.++..++.+..++.+.+.+.+.+.....+..+.++++.+. +..++
T Consensus 259 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~----------------~~~~l 319 (367)
T 3euc_A 259 VLTEATALFALEH---VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP----------------DAAQT 319 (367)
T ss_dssp HHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS----------------CHHHH
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC----------------CHHHH
Confidence 9999998888863 2334445555555555555555555322244556677776652 24778
Q ss_pred HHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 325 YRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.|.++||.++++.. ..+|+++. +++|+++++++|+++++
T Consensus 320 ~~~l~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 320 FDRLLARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp HHHHHTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 8999999999998753 34566655 89999999999999875
No 45
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.98 E-value=1e-31 Score=244.48 Aligned_cols=319 Identities=14% Similarity=0.092 Sum_probs=209.2
Q ss_pred CCcHHHHHHHHHHHHcC-CCCC-CCChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 9 PSYLQVLAALGETMKKG-TSFG-APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~-~~~~-~~~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
..+|++++++.+++... ..|+ ...+..+.+++.+.+.++ +.+++++++||++|++.+++.+ ..+++.|++..+
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~--~~~gd~vl~~~~ 113 (377)
T 3fdb_A 36 STCPAVLQAITDAVQREAFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHF--TPAQSKVIVPTP 113 (377)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH--SCTTCCEEEEES
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHh--cCCCCEEEEcCC
Confidence 37899999999998763 2222 113444444444444332 4689999999999999999876 346788999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++....+.. .|..+...+... . .|+++++++++. +++++++...++++|.+.+ .+.+
T Consensus 114 ~~~~~~~~~~~-~g~~~~~~~~~~--~--------------~d~~~l~~~l~~---~~~~v~i~~p~nptG~~~~-~~~l 172 (377)
T 3fdb_A 114 AYPPFFHLLSA-TQREGIFIDATG--G--------------INLHDVEKGFQA---GARSILLCNPYNPLGMVFA-PEWL 172 (377)
T ss_dssp CCTHHHHHHHH-HTCCEEEEECTT--S--------------CCHHHHHHHHHT---TCCEEEEESSBTTTTBCCC-HHHH
T ss_pred CcHhHHHHHHH-cCCEEEEccCCC--C--------------CCHHHHHHHhcc---CCCEEEEeCCCCCCCCCCC-HHHH
Confidence 99886544333 333332211111 1 189999999984 3445555444666676655 4449
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcc-c-Cccc---cccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLA-Y-GGAQ---EYFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPM 235 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g-~-~~~~---~~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~ 235 (368)
++|+++|++||+++|+||+|+++ +.+ . ...+ +..+..+++.|+||.++ +|+|+||+++ ++++++.+.. .
T Consensus 173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~---~ 249 (377)
T 3fdb_A 173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ---L 249 (377)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH---S
T ss_pred HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHH---H
Confidence 99999999999999999999988 555 2 1111 11223355679999997 7999998765 7888887763 2
Q ss_pred cccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
....+++.++++++++.++++...+ +...++++++++++++.|++... +.....+..+.+.|+.+....
T Consensus 250 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~------- 320 (377)
T 3fdb_A 250 SPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIP--GAKITPMQATYLMWIDFRDTT------- 320 (377)
T ss_dssp CHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHST--TCEECCCSBCSEEEEECTTSC-------
T ss_pred HHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCC--CceEecCCeeEEEEEECcccC-------
Confidence 2445678899999998888874311 22334444555555555444211 332222233344466653210
Q ss_pred cccccHHHHHHHHHHHHc-CeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 314 KKSETTKFARFYRGMLEE-GVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~-Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
. ..++...|+++ ||.+.++.. ..+|+++..+++++++++++|+++++++
T Consensus 321 -----~-~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 321 -----I-EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp -----C-CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred -----C-CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 0 13567777766 999998642 3457777779999999999999998753
No 46
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.98 E-value=2.3e-31 Score=243.27 Aligned_cols=324 Identities=15% Similarity=0.100 Sum_probs=212.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCe-EEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEM-VRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~-v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|++++++.+++.+....+.+.....++++.+++++ + +.++ +++++||++|+..+++.+ ..+++.|++.
T Consensus 40 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~vl~~ 117 (389)
T 1gd9_A 40 TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF--LKDGEEVLIP 117 (389)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT--CCTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHh--CCCCCEEEEc
Confidence 5789999999988764322222233456666666655 4 4678 999999999999999765 3467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|++....+ ...|..+...+.....++. -|++++++.++ ++++++++++.++++|.+. +.+
T Consensus 118 ~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~~~ 180 (389)
T 1gd9_A 118 TPAFVSYAPAV-ILAGGKPVEVPTYEEDEFR------------LNVDELKKYVT---DKTRALIINSPCNPTGAVL-TKK 180 (389)
T ss_dssp ESCCTTHHHHH-HHHTCEEEEEECCGGGTTC------------CCHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHH
T ss_pred CCCchhHHHHH-HHCCCEEEEeccCCccCCC------------CCHHHHHHhcC---cCceEEEEECCCCCCCcCC-CHH
Confidence 99999865443 3334433221111100100 17999999987 3577777766556667655 555
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-Ccccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
.+++|+++|++||+++|+||+|+++ ..+. ......+ +....+.|+||.++ +|+|+||+++++++++.+..
T Consensus 181 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~--- 257 (389)
T 1gd9_A 181 DLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVK--- 257 (389)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH---
T ss_pred HHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHH---
Confidence 6999999999999999999999887 5443 2222222 12223568999998 79999999999988887763
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....+++.+++++.++.++++....+.+.+++.++.+..++.+.+.+.+.+.....+..+.++|+.+..
T Consensus 258 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------- 327 (389)
T 1gd9_A 258 FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRD---------- 327 (389)
T ss_dssp HHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGG----------
T ss_pred HHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccC----------
Confidence 2334566788999988888776332211333333334444444444333334332223334455555421
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 328 --~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 328 --TGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp --GTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 0123468899998 8999999863 2346777667999999999999998865
No 47
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.98 E-value=2.1e-31 Score=242.39 Aligned_cols=319 Identities=15% Similarity=0.077 Sum_probs=216.5
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCC-hhHHHHHHHHHhhC----C-C--CC-eEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPC-LLENVLAEMVISAV----P-S--IE-MVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~----~-~--~~-~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++ .+|.+++++.+++.+...++++. ....++++.+++++ + + ++ ++++++||++++..+++.+ ..+++
T Consensus 36 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l--~~~gd 112 (376)
T 2dou_A 36 DLP-PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLAL--TEPED 112 (376)
T ss_dssp CCC-CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHH--CCTTC
T ss_pred CCC-CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh--cCCCC
Confidence 445 57899999999886532233444 46778888888876 5 2 34 8999999999999999876 34578
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++..++|++....+.. .|..+...+. ..++. .|++++++.++ +++++++++..++++|.+
T Consensus 113 ~vl~~~p~y~~~~~~~~~-~g~~~~~~~~--~~~~~------------~d~~~l~~~l~---~~~~~v~l~~p~nptG~~ 174 (376)
T 2dou_A 113 LLLLPEVAYPSYFGAARV-ASLRTFLIPL--REDGL------------ADLKAVPEGVW---REAKVLLLNYPNNPTGAV 174 (376)
T ss_dssp EEEEESSCCHHHHHHHHH-TTCEEEEECB--CTTSS------------BCGGGSCHHHH---HHEEEEEECSSCTTTCCC
T ss_pred EEEECCCCcHhHHHHHHH-cCCEEEEeeC--CCCCC------------CCHHHHHHhhc---cCceEEEECCCCCCcCcc
Confidence 999999999986554433 3333222111 11110 17888888886 367777776555556765
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCc-cccc---cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEY---FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~~---~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~ 230 (368)
. +.+++++|+++|++||+++|+||+|+++ +.+... .... .+..+.+.|+||.++ +|+|+||+++++++++.+.
T Consensus 175 ~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 253 (376)
T 2dou_A 175 A-DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLE 253 (376)
T ss_dssp C-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHH
Confidence 5 5666999999999999999999999988 544321 1222 233455679999998 8999999999999988876
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
. .....+++.++++++++.++++.. +++.++.++..+..++.+.+.+.+. .....+..+.++|+.+..
T Consensus 254 ~---~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~------ 321 (376)
T 2dou_A 254 R---VKGVIDFNQYAGVLRMGVEALKTP--KEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPE------ 321 (376)
T ss_dssp H---HHHHHCCCSCHHHHHHHHHHHTSC--HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCT------
T ss_pred H---HHHhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCeeEEEEEECCC------
Confidence 3 233445677889988888777532 2344444444455555555544443 221122335567776631
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHH
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..+..++.+.|+++||.+.++. ...+|+++..+++++++++++|++++
T Consensus 322 -------~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 322 -------GVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp -------TCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 1224678999999999998863 23456776679999999999998865
No 48
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.98 E-value=1.9e-30 Score=240.00 Aligned_cols=317 Identities=18% Similarity=0.153 Sum_probs=229.1
Q ss_pred eeccC-CCcHHHHHHHHHHHHc-CCCCC------CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 4 LIILF-PSYLQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 4 ~~~~g-~~~~~v~~a~~~~~~~-~~~~~------~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
.+++| +.+|++++++.+++.. ...++ .+.+...++++.++++++- +++++++||++|+..+++.+ ..++
T Consensus 72 ~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~-~~~i~~~sGs~a~~~al~~l--~~~g 148 (427)
T 2w8t_A 72 YNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGT-TGAIVFSTGYMANLGIISTL--AGKG 148 (427)
T ss_dssp CCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHH--SCTT
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCC-CceEEecCcHHHHHHHHHHh--cCCC
Confidence 34678 5899999999998876 32221 1457789999999999853 46777888999999988765 3456
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCC-CeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG-EIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~-~~~~~~~~~~~~~~g 154 (368)
+.|++.. .+|+.....+...+. +++.++++|+++|++++++..+ ++++++++++++++|
T Consensus 149 d~vl~~~-~~h~~~~~~~~~~g~-------------------~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG 208 (427)
T 2w8t_A 149 EYVILDA-DSHASIYDGCQQGNA-------------------EIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLG 208 (427)
T ss_dssp CEEEEET-TCCHHHHHHHHHSCS-------------------EEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTT
T ss_pred CEEEECC-cccHHHHHHHHHcCC-------------------eeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCC
Confidence 6666655 455544444443332 2344455699999999986433 789999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc-cCccccccCCCcc----hhhhhhhccCCccceeeeehHHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFGVTPD----LTTLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g-~~~~~~~~~~~~d----i~s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
.+.+ +++|+++|++||++||+||+|+++ ... .......+++.++ +.||||+++ ++.||+++++++++.
T Consensus 209 ~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g--~~gG~v~~~~~l~~~ 282 (427)
T 2w8t_A 209 DIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG--TVGGFVVSNHPKFEA 282 (427)
T ss_dssp EECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SCCEEEEECCTTGGG
T ss_pred CccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc--cCCCEEEeCHHHHHH
Confidence 9888 999999999999999999999875 221 1223334555444 678999997 355999999888888
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ccceEEEEeecCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGP 306 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 306 (368)
+......+ ..+.+.++++++++.++++.+.. +++.+++.++++++++.|++. ++...... .++++++.+.
T Consensus 283 l~~~~~~~-~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~--- 354 (427)
T 2w8t_A 283 VRLACRPY-IFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM----GFRLGTETCDSAIVAVMLE--- 354 (427)
T ss_dssp GGGTCHHH-HSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH----TCEESCSSCCSSEEEEEES---
T ss_pred HHHhcccc-cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCcccCCCCCCCEEEEEEC---
Confidence 87532211 23457788999888899988764 456778888888888888775 33222123 5677787762
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-------cccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-------AGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-------~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.....++++.|+++||.+.++..+ .+|+ +..++++++++++++|++++++
T Consensus 355 ----------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 355 ----------DQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp ----------SHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 3345678999999999999886432 3454 3446999999999999998764
No 49
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.98 E-value=1.9e-31 Score=242.58 Aligned_cols=315 Identities=14% Similarity=0.114 Sum_probs=218.0
Q ss_pred HHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhh
Q 017633 16 AALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 93 (368)
Q Consensus 16 ~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~ 93 (368)
+++.+.+......+.+.....++++.+++++. +.+++++++||++|+..+++.+ ..++|.|++..++|++......
T Consensus 46 ~~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~ 123 (375)
T 3op7_A 46 EDFYKKLQGTKLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSL--IEPGDHVISLYPTYQQLYDIPK 123 (375)
T ss_dssp HHHHHHHHTSCCSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHhcCCcCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHh--cCCCCEEEEeCCCchhHHHHHH
Confidence 34555555544334455667899999999873 6789999999999999999876 3567899999999988654433
Q ss_pred hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 017633 94 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 173 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~ 173 (368)
..|..+...+.....++. -|+++++++++ ++++++++++.++++|.+. +.+++++|+++|++|
T Consensus 124 -~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~~~~l~~i~~la~~~ 186 (375)
T 3op7_A 124 -SLGAEVDLWQIEEENGWL------------PDLEKLRQLIR---PTTKMICINNANNPTGAVM-DRTYLEELVEIASEV 186 (375)
T ss_dssp -HTTCEEEEEEEEGGGTTE------------ECHHHHHHHCC---TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHTT
T ss_pred -HcCCEEEEEeccccCCCC------------CCHHHHHHhhc---cCCeEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHc
Confidence 233322211111001100 08999999997 4677778877777777655 555699999999999
Q ss_pred CCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHH
Q 017633 174 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAG 251 (368)
Q Consensus 174 ~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~ 251 (368)
|+++|+||+|+++ +.+.....+.++..+++.||||.++ +|+|+||+++++++++.+.. .....+++.++++++++
T Consensus 187 ~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 263 (375)
T 3op7_A 187 GAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRD---YRDYTMICAGVFDDLVA 263 (375)
T ss_dssp TCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTT---TGGGTTSCCCHHHHHHH
T ss_pred CCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHH---HHhhhccCCCcHHHHHH
Confidence 9999999999887 4322233344566677889999999 89999999999999998874 33456677889999988
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecCCCcccchhcccccHHHHHHHHHH-H
Q 017633 252 IHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-L 329 (368)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 329 (368)
..+++.. +.+.++.+++.+..++.+.+.+.+.+..... +..+.+.++.+.. ..+..++++.| .
T Consensus 264 ~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ll~ 328 (375)
T 3op7_A 264 QLALAHY--QEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAV-------------DMPMEDFCLQLLQ 328 (375)
T ss_dssp HHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECC-------------SSCHHHHHHHHHH
T ss_pred HHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCC-------------CCCHHHHHHHHHH
Confidence 8887743 2334444444444455555544444322222 2334455655531 12246788887 4
Q ss_pred HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 330 EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 330 ~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 329 ~~gi~v~~g~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 329 EHGVLLVPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp HHCEECEEGGGGTCTTEEEECCCSCHHHHHHHHHHHHHHHGG
T ss_pred hCCEEEeChhhhCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 78999998753 456778888889999999999999865
No 50
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.98 E-value=1.2e-30 Score=238.37 Aligned_cols=318 Identities=16% Similarity=0.118 Sum_probs=214.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
.+|.+++++.+++......+.+.....++++.+++++ + +.+ ++++++||++++..+++.+ ..+++.|++.
T Consensus 44 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~vl~~ 121 (386)
T 1u08_A 44 GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITAL--VRNGDEVICF 121 (386)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHH--CCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHh--CCCCCEEEEe
Confidence 5789999999988763222222223456666666653 3 466 9999999999999999876 3467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|++.... +...|..+...+....... .|++++++.++ ++++++++++.++++|.+. +.+
T Consensus 122 ~p~~~~~~~~-~~~~g~~~~~v~~~~~~~~-------------~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~-~~~ 183 (386)
T 1u08_A 122 DPSYDSYAPA-IALSGGIVKRMALQPPHFR-------------VDWQEFAALLS---ERTRLVILNTPHNPSATVW-QQA 183 (386)
T ss_dssp ESCCTTHHHH-HHHTTCEEEEEECCTTTCC-------------CCHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHH
T ss_pred CCCchhHHHH-HHHcCCEEEEeecCcccCc-------------CCHHHHHHhhc---ccCEEEEEeCCCCCCCccC-CHH
Confidence 9999976543 3333433322111110111 18999999986 4677777776666677655 555
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccc---c-ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---E-YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~---~-~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
++++|+++|++||+++|+||+|+++ +.|.. ... . ..+..+.+.|+||.++ +|+|+||+++++++++.+..
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~--- 260 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK--- 260 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHH---
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHH---
Confidence 6999999999999999999999887 54431 111 1 2345556779999999 79999999999988887762
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.....+++.+++++.++.++++.. +++.++++++.+..++.+.+.+.+.+.....+..+.++|+.+...
T Consensus 261 ~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~--------- 329 (386)
T 1u08_A 261 VHQYLTFSVNTPAQLALADMLRAE--PEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAV--------- 329 (386)
T ss_dssp HHHHHTSSCCHHHHHHHHHHHHHC--THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTT---------
T ss_pred HHHhhccCCChHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCC---------
Confidence 233456788899988888888754 334444555555555555555444444332233456777776311
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCC--------CCccccccCCCHHHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~--------~~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
...+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++
T Consensus 330 --~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 330 --STLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp --CCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred --CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 0012467888887 6799998763 234567777799999999999864
No 51
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.98 E-value=8.1e-31 Score=238.97 Aligned_cols=316 Identities=18% Similarity=0.149 Sum_probs=216.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|.+++++.+++.+...| .......++++.++++++ +++++++++||++|++.+++.+ ..+++.|++..++|++.
T Consensus 39 ~~~~v~~a~~~~~~~~~~y-~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~Vl~~~~~~~~~ 115 (381)
T 1v2d_A 39 PPPFLLEAVRRALGRQDQY-APPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSL--VGPGDEVVVLEPFFDVY 115 (381)
T ss_dssp CCHHHHHHHHHHTTTSCSC-CCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCTTCEEEEEESCCTTH
T ss_pred CCHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHh--CCCCCEEEEcCCCchhH
Confidence 6789999999988752222 233457899999999987 6678999999999999999877 35678999999999886
Q ss_pred chhhhhhcCCCccccCCC--CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLP--DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 166 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i 166 (368)
... ....|..+...+.. .... ..|++++++.++ ++++++++++.++++|.+.+ .+++++|
T Consensus 116 ~~~-~~~~g~~~~~v~~~~~~~~~-------------~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~-~~~l~~i 177 (381)
T 1v2d_A 116 LPD-AFLAGAKARLVRLDLTPEGF-------------RLDLSALEKALT---PRTRALLLNTPMNPTGLVFG-ERELEAI 177 (381)
T ss_dssp HHH-HHHTTCEEEEEECEEETTEE-------------ECCHHHHHTTCC---TTEEEEEEESSCTTTCCCCC-HHHHHHH
T ss_pred HHH-HHHcCCEEEEEeCCCCCccC-------------CcCHHHHHHhcC---cCCEEEEECCCCCCCCCccC-HHHHHHH
Confidence 543 33334332221111 0000 017999998886 46788777766666776654 5669999
Q ss_pred HHHHHHhCCEEEEehhhhch-hccc-Ccccc--ccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccC
Q 017633 167 RRITKENGALLIFDEVMTGF-RLAY-GGAQE--YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 241 (368)
Q Consensus 167 ~~l~~~~~~~li~De~~~~~-~~g~-~~~~~--~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~ 241 (368)
+++|++||+++|+||+|+++ . |. ..... ..+..+++.|+||.++ +|+|+||+++++++++.+.. .....++
T Consensus 178 ~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~---~~~~~~~ 253 (381)
T 1v2d_A 178 ARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG---MRQWTSF 253 (381)
T ss_dssp HHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH---HHHHHTS
T ss_pred HHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH---HHhhccc
Confidence 99999999999999999887 4 32 11222 2355667789999998 78999999999888877752 2234567
Q ss_pred CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 242 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 242 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
+.++++++++.++++....+++.+++.++.+..++.+.+.+.+.++....+..+.++|+.+. ..
T Consensus 254 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-------------~~--- 317 (381)
T 1v2d_A 254 SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELP-------------GW--- 317 (381)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECT-------------TC---
T ss_pred CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecC-------------hH---
Confidence 88999999988888755223333444444444444444443334444333333556676652 11
Q ss_pred HHHHHHHHHcCeeecCCC--------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 322 ARFYRGMLEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~--------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++...|.++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 318 -~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 318 -DAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNS 370 (381)
T ss_dssp -CHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred -hHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 15667788999998763 2345666666999999999999998754
No 52
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.97 E-value=2.9e-30 Score=236.03 Aligned_cols=329 Identities=13% Similarity=0.084 Sum_probs=219.2
Q ss_pred cCCCcHHHHHHHHHHHHcCC-CCCC-CChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 7 LFPSYLQVLAALGETMKKGT-SFGA-PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..+.+|++++++.+++.+.. .|+. ..+..+++++++++.++ +.+++++++||++|+..+++.+ ..+++.|++.
T Consensus 38 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l--~~~gd~vl~~ 115 (391)
T 3dzz_A 38 DFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQF--TSPGDQILVQ 115 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHH--SCTTCEEEEC
T ss_pred CCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHh--CCCCCeEEEC
Confidence 33478999999999987632 2221 33556677777776654 4789999999999999999876 3567899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|++....+.. .|..+...+.....+ ... .|++++++++++ ++++++++++.++++|.+.++.+
T Consensus 116 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~--------~~~---~d~~~l~~~l~~--~~~~~v~i~~p~nptG~~~~~~~ 181 (391)
T 3dzz_A 116 EPVYNMFYSVIEG-NGRRVISSDLIYENS--------KYS---VNWADLEEKLAT--PSVRMMVFCNPHNPIGYAWSEEE 181 (391)
T ss_dssp SSCCHHHHHHHHH-TTCEEEECCCEEETT--------EEE---CCHHHHHHHHTS--TTEEEEEEESSBTTTTBCCCHHH
T ss_pred CCCcHHHHHHHHH-cCCEEEEeeeeecCC--------cee---ecHHHHHHHHhc--cCceEEEEECCCCCCCcccCHHH
Confidence 9999875444333 333222211100011 000 189999999974 36777777766677777665444
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc-CccccccCC-Ccc----hhhhhhhcc-CCccceeeeeh-HHHHHHhcCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGV-TPD----LTTLGKIIG-GGLPVGAYGGR-RDIMEMVAPA 232 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~~-~~d----i~s~sK~~~-~G~~iG~v~~~-~~~~~~~~~~ 232 (368)
+++|+++|++||+++|+||+|+++ +.|. ......+.. .+| +.|+||.++ +|+|+||++++ +++++.+...
T Consensus 182 -l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~ 260 (391)
T 3dzz_A 182 -VKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES 260 (391)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence 999999999999999999999887 5553 233333332 256 568999998 89999999886 8888877631
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.....+++.++++++++.++++...+ +...+++.++++++.+.|++... +.....+..+.+.|+.+...
T Consensus 261 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~----- 331 (391)
T 3dzz_A 261 --FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVP--EVKVLDSNASYLAWVDISAL----- 331 (391)
T ss_dssp --HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT--TSEECCCCBSSEEEEECGGG-----
T ss_pred --HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCC--CcEEeccCceEEEEEehhhc-----
Confidence 11234567888999998888875311 22334444444445444444211 23222233344555655311
Q ss_pred chhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 311 EDAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..+..++.+.|+ ++||.+.++.. ..+|+++..+++++++++++|+++++++
T Consensus 332 -------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 332 -------GMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp -------CSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 123578999996 88999998642 3457777789999999999999998763
No 53
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.97 E-value=7.4e-31 Score=238.29 Aligned_cols=307 Identities=15% Similarity=0.102 Sum_probs=210.3
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+++ +|.+++++.+++......+.+.....++++.+++++ + +++++++++||++|+..+++.+ ..+++.|
T Consensus 40 ~~~~-~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~v 116 (370)
T 2z61_A 40 DFNT-PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSI--IDDGDEV 116 (370)
T ss_dssp SSCC-CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHH--CCTTCEE
T ss_pred CCCC-CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHh--cCCCCEE
Confidence 3454 789999999988763222222233455555555554 2 4689999999999999999876 3467899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++..++|++....+. ..|..+ +.++ .|++++++.++ ++++++++++.++++|.+.+
T Consensus 117 l~~~p~~~~~~~~~~-~~g~~~-------------------~~v~-~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~ 172 (370)
T 2z61_A 117 LIQNPCYPCYKNFIR-FLGAKP-------------------VFCD-FTVESLEEALS---DKTKAIIINSPSNPLGEVID 172 (370)
T ss_dssp EEESSCCTHHHHHHH-HTTCEE-------------------EEEC-SSHHHHHHHCC---SSEEEEEEESSCTTTCCCCC
T ss_pred EEeCCCchhHHHHHH-HcCCEE-------------------EEeC-CCHHHHHHhcc---cCceEEEEcCCCCCcCcccC
Confidence 999999988654432 223221 2222 28999999987 36777777666667788887
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
++ |.++|++||+++|+||+|+++ +.|.......+ +....+.|+||.++ +|+|+||+++++++++.+..
T Consensus 173 ----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~- 246 (370)
T 2z61_A 173 ----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILK- 246 (370)
T ss_dssp ----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-
T ss_pred ----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHH-
Confidence 66 999999999999999999887 54432222222 23334568999998 89999999999998887762
Q ss_pred CCccccccCCCCHHHHHHHHHHHHH-Hcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKR-LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~-~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
.....+++.+++++.++.++++. ..+ +.+.++++++++++.+.|++. +.....+..+.++|+.+.
T Consensus 247 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~------ 314 (370)
T 2z61_A 247 --LQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF----GWEVNNPIGAYYVFPNIG------ 314 (370)
T ss_dssp --HHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCBTTEECCBCS------
T ss_pred --HHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc----CCeecCCCcceEEEEecC------
Confidence 33445667899999988887764 211 223445555555555555543 332222233445555441
Q ss_pred cchhcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 310 FEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
. +..++.+.|+ ++||.+.++. ...+|+++..+++++++++++|+++++
T Consensus 315 -------~--~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 315 -------E--DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp -------S--CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred -------C--CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 1 2467899998 7899998863 334677777899999999999999875
No 54
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.97 E-value=3.1e-30 Score=238.31 Aligned_cols=344 Identities=13% Similarity=0.073 Sum_probs=223.9
Q ss_pred CcHHHHHHHHHHHHcCC---CCCCC---ChhHHHHHHHHHhhCC---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 10 SYLQVLAALGETMKKGT---SFGAP---CLLENVLAEMVISAVP---SI-EMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~---~~~~~---~~~~~~l~~~l~~~~~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+|.+++++.+++.... .|+.+ .+...++++++.+.++ .+ +++++++||++++..+++.+ ..+++.|+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~--~~~gd~vl 119 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQAL--VDEGDEVI 119 (422)
T ss_dssp CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHH--CCTTCEEE
T ss_pred CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHH--cCCCCEEE
Confidence 57789999999887632 23211 2334444444444333 23 68999999999999999876 35678899
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCC---CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPD---SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
+..++|++...... ..|..+...+... ..+... ...... -|+++++++++ ++++++++++.+|++|.+
T Consensus 120 ~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~G~~~--~~~~~~---~d~~~l~~~~~---~~~~~v~~~~p~nptG~~ 190 (422)
T 3fvs_A 120 IIEPFFDCYEPMTM-MAGGRPVFVSLKPGPIQNGELG--SSSNWQ---LDPMELAGKFT---SRTKALVLNTPNNPLGKV 190 (422)
T ss_dssp EEESCCTTHHHHHH-HTTCEEEEEECBCCCCCSSSCC--BGGGSB---CCHHHHHTTCC---TTEEEEEEESSCTTTCCC
T ss_pred EcCCCchhhHHHHH-HcCCEEEEEecccccccccccc--cccCCC---CCHHHHHhhcC---CCceEEEECCCCCCCCcC
Confidence 99999988654333 3333332211111 011000 000001 17999998887 467777777766667776
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHh
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~ 229 (368)
. +.+.+++|+++|++||+++|+||+|+++ +.+.. .....+ +..+.+.|+||.++ +|+|+||+++++++++.+
T Consensus 191 ~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~ 269 (422)
T 3fvs_A 191 F-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHL 269 (422)
T ss_dssp C-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHH
Confidence 6 5555999999999999999999999887 54432 222222 22345679999999 899999999999888877
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHH-----HccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKR-----LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
.. .....+++.++++++++.++++. ...+.+.+++.++.+..++.+.+.+.+.+.....+..+.++|+.+..
T Consensus 270 ~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 346 (422)
T 3fvs_A 270 RT---VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD 346 (422)
T ss_dssp HH---HHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred HH---HHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechh
Confidence 62 33456778899999999888874 11245556666666666666666665566554555667777877642
Q ss_pred CCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCC-----------CccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-----------EAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~-----------~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..................+++..|++ +||.+.++.. ..+|+++..+++++++++++|+++++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~l 422 (422)
T 3fvs_A 347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVEL 422 (422)
T ss_dssp HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_pred hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhhC
Confidence 10000000000000114577777664 6999998642 3457778889999999999999998764
No 55
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.97 E-value=2.9e-31 Score=243.29 Aligned_cols=323 Identities=15% Similarity=0.114 Sum_probs=213.8
Q ss_pred ccCCCcHHHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 6 ILFPSYLQVLAALGETMKKG----TSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
+.++.+|++++++.+++.+. ..|+ +.....++++.++++++ +.+++++++||++++..+++.+ ..+++.|++
T Consensus 44 ~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~--~~~gd~Vl~ 120 (397)
T 2zyj_A 44 PELFPKEEAAEAAARILREKGEVALQYS-PTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF--LDEGSPVLL 120 (397)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHTSCC-CTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEE
T ss_pred chhCCHHHHHHHHHHHHHhcchhhhCCC-CCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh--CCCCCEEEE
Confidence 34567789999999887652 2232 33456889999999886 5689999999999999999876 346789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEE-cccCCCCCcccCC
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 159 (368)
..++|++....+.. .|..+...+... .+ .|++++++.+++. +++++++ ...++++|.+ .+
T Consensus 121 ~~p~y~~~~~~~~~-~g~~~~~~~~~~-~~--------------~d~~~l~~~l~~~--~~~~v~~~~~~~nptG~~-~~ 181 (397)
T 2zyj_A 121 EAPSYMGAIQAFRL-QGPRFLTVPAGE-EG--------------PDLDALEEVLKRE--RPRFLYLIPSFQNPTGGL-TP 181 (397)
T ss_dssp EESCCHHHHHHHHT-TCCEEEEEEEET-TE--------------ECHHHHHHHHHHC--CCSCEEECCBSCTTTCCB-CC
T ss_pred eCCCcHHHHHHHHH-cCCEEEecCcCC-CC--------------CCHHHHHHHHhhc--CCeEEEECCCCcCCCCCc-CC
Confidence 99999886544332 233222111110 11 1899999999852 4566644 3334445655 45
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc------CCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF------GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~------~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
.+++++|+++|++||+++|+||+|+++ +.|.. .....+ +....+.|+||++++|+|+||+++++++++.+..
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~ 261 (397)
T 2zyj_A 182 LPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQ 261 (397)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHH
Confidence 666999999999999999999999887 54432 222222 2224467899999988999999999988887762
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc---CCceEEeeccceEEEEeecCCCc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA---GHAICGGYISGMFGFFFTEGPVY 308 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
.....+++.+++++.++.++++...- ++.++..+..+..++.+.+.+.+. +.....+..+.++|+.+..
T Consensus 262 ---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~---- 333 (397)
T 2zyj_A 262 ---AKQGADLHTPMLNQMLVHELLKEGFS-ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK---- 333 (397)
T ss_dssp ---HHHHHHSSCCHHHHHHHHHHHTTTHH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST----
T ss_pred ---HHHhhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC----
Confidence 22344566788998888777752110 122333333333333344433332 2222223456677777631
Q ss_pred ccchhcccccHHHHHHHHHHHHcCeeecCCCC--------CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 309 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--------EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--------~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|.++||.+.++.. ..+|+++.. +++++++++++|++++++
T Consensus 334 ---------~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 334 ---------GLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp ---------TCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 12247899999999999988632 234655444 799999999999998864
No 56
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.97 E-value=9.9e-31 Score=239.78 Aligned_cols=316 Identities=13% Similarity=0.077 Sum_probs=215.1
Q ss_pred CCCcHHHHHHHHHHHHcC-----CCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 8 FPSYLQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
...+|++++++.+++.+. ..|+ +.....++++.+++++ + +.+++++++||++|+..+++.+ ..++
T Consensus 47 ~~~~~~v~~a~~~~~~~~~~~~~~~y~-~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l--~~~g 123 (398)
T 3ele_A 47 IPAPQIVNDTIKELVTDYDSVALHGYT-SAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRAL--TSDA 123 (398)
T ss_dssp SCCCHHHHHHHHHHHHHSCHHHHHSCC-CTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH--CCST
T ss_pred CCCCHHHHHHHHHHHhcCCccccCCcC-CCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHH--cCCC
Confidence 346789999999988763 2232 3333345555555543 3 5789999999999999999877 3456
Q ss_pred -ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 76 -ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 -~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+.|++..++|++....+. ..|..+...+........ |+++++++++ +++++++++..++++|
T Consensus 124 ~d~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~-------------d~~~l~~~l~---~~~~~v~~~~p~nptG 186 (398)
T 3ele_A 124 YDEFITIAPYFPEYKVFVN-AAGARLVEVPADTEHFQI-------------DFDALEERIN---AHTRGVIINSPNNPSG 186 (398)
T ss_dssp TCEEEEESSCCTHHHHHHH-HTTCEEEEECCCTTTSSC-------------CHHHHHHTCC---TTEEEEEECSSCTTTC
T ss_pred CCEEEEeCCCchhhHHHHH-HcCCEEEEEecCCcCCcC-------------CHHHHHHHhC---cCCCEEEEcCCCCCCC
Confidence 899999999987654433 333333222211111111 8999999887 3677777766666677
Q ss_pred cccCCHHHHHHHHHHHHH------hCCEEEEehhhhch-hcccC--ccccccCCCcchhhhhhhcc-CCccceeeeehHH
Q 017633 155 FIAPKPDFLNAIRRITKE------NGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRD 224 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~------~~~~li~De~~~~~-~~g~~--~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~ 224 (368)
.+.+.+ .+++|+++|++ ||+++|+||+|.++ +.+.. ......+..+.+.|+||.++ +|+|+||++++++
T Consensus 187 ~~~~~~-~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 265 (398)
T 3ele_A 187 TVYSEE-TIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE 265 (398)
T ss_dssp CCCCHH-HHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred CCCCHH-HHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcch
Confidence 666544 49999999999 99999999999988 54432 22233444456679999999 8999999988876
Q ss_pred H------HHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceE
Q 017633 225 I------MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 298 (368)
Q Consensus 225 ~------~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 298 (368)
+ .+.+... .....+++.+.+++.++.+.++ +....++++++++++++.|++. +.....+..+.++
T Consensus 266 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~ 336 (398)
T 3ele_A 266 VYDKAELYAAVCGA--GRALGYVCAPSLFQKMIVKCQG---ATGDINAYKENRDLLYEGLTRI----GYHCFKPDGAFYM 336 (398)
T ss_dssp STTHHHHHHHHHHH--HHHTTCCCSCHHHHHHHTTCTT---CCCCHHHHHHHHHHHHHHHHHH----TCCEECCSBSSEE
T ss_pred hhhHHHHHHHHHHH--hhhccccCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHc----CCeecCCCeeEEE
Confidence 3 2222210 0112345667777777655443 4446788888888888888875 3333333344457
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
|+.+.. .+..++++.|.++||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 337 ~~~~~~--------------~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 337 FVKALE--------------DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp EEECSS--------------SCHHHHHHHHHTTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCC--------------CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 776521 1246888899999999998752 346777778999999999999999865
No 57
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.97 E-value=8.1e-31 Score=239.55 Aligned_cols=322 Identities=13% Similarity=0.108 Sum_probs=212.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|.+++++.+++......+.+.....++++.+++++ + +.+++++++||++|+..+++.+ ..+++.|++..
T Consensus 44 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~vl~~~ 121 (388)
T 1j32_A 44 TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAM--IEPGDEVIIPA 121 (388)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEES
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh--cCCCCEEEEcC
Confidence 5788999999988663222222223455555555554 3 4678999999999999999876 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++.... ....|..+...+.....+.. .|++++++.++ ++++++++++.++++|.+.+ .+.
T Consensus 122 ~~~~~~~~~-~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~-~~~ 184 (388)
T 1j32_A 122 PFWVSYPEM-VKLAEGTPVILPTTVETQFK------------VSPEQIRQAIT---PKTKLLVFNTPSNPTGMVYT-PDE 184 (388)
T ss_dssp SCCTHHHHH-HHHTTCEEEEECCCGGGTTC------------CCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC-HHH
T ss_pred CCChhHHHH-HHHcCCEEEEecCCcccCCC------------CCHHHHHHhcC---cCceEEEEeCCCCCCCcCCC-HHH
Confidence 999875443 33334333221111100100 17999999987 36777777666666776654 556
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccc-----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY-----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~-----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
+++|+++|++||+++|+||+|+++ +.+.. ..... .+..+++.|+||.++ +|+|+||+++++++++.+..
T Consensus 185 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~--- 261 (388)
T 1j32_A 185 VRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK--- 261 (388)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHH---
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHH---
Confidence 999999999999999999999887 44421 11111 334556779999998 89999999999988887762
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchh
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.....+++++++++.++.++++.. +++.++..++.+..++.+.+.+.+. ++....+..+.++|+.+..
T Consensus 262 ~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~--------- 330 (388)
T 1j32_A 262 IQGHSTSNVCTFAQYGAIAAYENS--QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAK--------- 330 (388)
T ss_dssp HHHTTTCSCCHHHHHHHHHHHHSC--SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGG---------
T ss_pred HHhhcccCCCHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCC---------
Confidence 334456788899998888877622 2334444444444444444444444 3322222233444443311
Q ss_pred cccccHHHHHHHHHHHH-cCeeecCCC----CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 314 KKSETTKFARFYRGMLE-EGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~-~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|++ +||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 331 ---~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 331 ---TGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp ---GTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 01234688999986 799999864 2456777778999999999999998865
No 58
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.97 E-value=1e-30 Score=241.71 Aligned_cols=327 Identities=13% Similarity=0.026 Sum_probs=218.3
Q ss_pred CCcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 9 PSYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
..+|.+++++.+++...... +.+.....++++.++++++ ..+++++|+||++|++.+++.+. .+++.|++.
T Consensus 71 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~--~~gd~vl~~ 148 (427)
T 3dyd_A 71 PTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLA--NPGQNILVP 148 (427)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhc--CCCCEEEEc
Confidence 36778999999988774332 3355667889999998876 46899999999999999998773 467899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|+++...+.. .|..+....+...... .+ |++++++.+++ +++++++...++++|.+. +.+
T Consensus 149 ~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~---------~~---d~~~l~~~l~~---~~~~v~i~~p~nptG~~~-~~~ 211 (427)
T 3dyd_A 149 RPGFSLYKTLAES-MGIEVKLYNLLPEKSW---------EI---DLKQLEYLIDE---KTACLIVNNPSNPCGSVF-SKR 211 (427)
T ss_dssp ESCCTHHHHHHHH-TTCEEEEEEEEGGGTT---------EE---CHHHHHSSCCT---TEEEEEEESSCTTTCCCC-CHH
T ss_pred CCCchhHHHHHHH-cCCEEEEEecccccCC---------CC---CHHHHHHHhcc---CCCEEEEECCCCCCCCCC-CHH
Confidence 9999876443333 3332221111100000 00 78999988863 566666655566666655 566
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccccCCCcchh---hhhhhcc-CCccceeeeeh-------HHHHHH
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGR-------RDIMEM 228 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~~~~~di~---s~sK~~~-~G~~iG~v~~~-------~~~~~~ 228 (368)
++++|+++|++||+++|+||+|.+| +.+.. .....++..++++ |+||.++ +|+|+||++++ +++.+.
T Consensus 212 ~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~ 291 (427)
T 3dyd_A 212 HLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291 (427)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHH
Confidence 6999999999999999999999988 55543 2334444444444 8999987 78999999886 456666
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 307 (368)
+.. . ...++++++++++++.++++... .++.+...++.+..++.+.+.+.+.+ +....+..+.++++.+.....
T Consensus 292 l~~---~-~~~~~~~~~~~~~a~~~~L~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~ 366 (427)
T 3dyd_A 292 LVK---L-SQRILGPCTIVQGALKSILCRTP-GEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHF 366 (427)
T ss_dssp HHH---H-HHHHCCSCHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGC
T ss_pred HHH---H-HhccCCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhc
Confidence 652 1 22356889999999988887432 22333333333444444444444443 222234456677776642110
Q ss_pred cccchhcccccHHHHHHHHHHH-HcCeeecCCC----CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++..+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 367 --------~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 367 --------PEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp --------TTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 11123467888886 7899999874 2346777788999999999999998864
No 59
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.97 E-value=1.7e-30 Score=236.97 Aligned_cols=323 Identities=10% Similarity=0.036 Sum_probs=215.5
Q ss_pred CCcHHHHHHHHHHHHcC-CCCC-CCChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 9 PSYLQVLAALGETMKKG-TSFG-APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~-~~~~-~~~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+.+|++++++.+++.+. ..|+ ...+...++++.+++.++ +.+++++++||+++++.+++.+ ..+++.|++..+
T Consensus 37 ~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l--~~~gd~vl~~~~ 114 (383)
T 3kax_A 37 EVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF--TKENESVLVQPP 114 (383)
T ss_dssp CCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH--CCTTCEEEECSS
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh--CCCCCEEEEcCC
Confidence 37899999999998763 2232 246788888888888775 5789999999999999999876 356789999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++....+. ..|..+...+.....+ ... .|+++++++++ ++++++++++.++++|.+.+ .+++
T Consensus 115 ~~~~~~~~~~-~~g~~~~~~~~~~~~~--------~~~---~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~~-~~~l 178 (383)
T 3kax_A 115 IYPPFFEMVT-TNNRQLCVSPLQKQND--------TYA---IDFEHLEKQFQ---QGVKLMLLCSPHNPIGRVWK-KEEL 178 (383)
T ss_dssp CCHHHHHHHH-HTTCEEEECCCEEETT--------EEE---CCHHHHHHHHT---TTCCEEEEESSBTTTTBCCC-HHHH
T ss_pred CcHHHHHHHH-HcCCEEEeccceecCC--------cEE---EcHHHHHHHhC---cCCeEEEEeCCCCCCCcCcC-HHHH
Confidence 9987654433 3333322211110011 000 18999999994 45666666666666776554 5559
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC-ccccc-----cCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY-----FGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGP 234 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~-----~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~ 234 (368)
++|+++|++||+++|+||+|+++ +.|.. ..... .+..+.+.|+||.++ +|+|+||+++ ++++++.+....
T Consensus 179 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~- 257 (383)
T 3kax_A 179 TKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQ- 257 (383)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHH-
T ss_pred HHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHH-
Confidence 99999999999999999999887 54432 11211 234455779999999 8999999987 678877776311
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-c-CCceEEeeccceEEEEeecCCCcccch
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-A-GHAICGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
....+++.++++++++.++++.. +++.+++.++.+..++.+.+.+.+ . +.....+..+.+.|+.+...
T Consensus 258 -~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 327 (383)
T 3kax_A 258 -YRQGFHGLNIFAYTAMQSAYTEC--NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL------- 327 (383)
T ss_dssp -HHTTCCCCCHHHHHHHHHHTTTC--HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG-------
T ss_pred -hhcccCCCCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc-------
Confidence 12234478899999988877632 223344444444444444444333 2 23222223334445665321
Q ss_pred hcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
..+..++.+.|+ ++||.+.++.. ..+|+++..+++++++++++|++++
T Consensus 328 -----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 328 -----NLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp -----CCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 123578999998 68999998632 3467777789999999999999876
No 60
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.97 E-value=2.5e-31 Score=244.15 Aligned_cols=323 Identities=12% Similarity=0.039 Sum_probs=214.1
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCC-ChhHHHHHHHHHhhC----C-C--C-CeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAV----P-S--I-EMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~----~-~--~-~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++ .+|.+++++.+++.+....+++ .....++++.+++++ + + + +++++++||+++++.+++.+ ..+++
T Consensus 58 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l--~~~gd 134 (404)
T 2o1b_A 58 DGP-TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV--INPGD 134 (404)
T ss_dssp SSC-CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH--CCTTC
T ss_pred CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh--cCCCC
Confidence 344 5789999999887542111222 234566777777665 5 2 2 79999999999999999876 34578
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++..++|++....+. ..|..+...+... .++. .|+++|++.++ +++++++++..++++|.+
T Consensus 135 ~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~-~~~~------------~d~~~l~~~l~---~~~~~v~l~~p~nptG~~ 197 (404)
T 2o1b_A 135 YVLLPDPGYTDYLAGVL-LADGKPVPLNLEP-PHYL------------PDWSKVDSQII---DKTKLIYLTYPNNPTGST 197 (404)
T ss_dssp EEEEEESCCSSHHHHHH-HTTCEEEEEECCT-TTCC------------CCGGGSCHHHH---HHEEEEEECSSCTTTCCC
T ss_pred EEEEcCCCchhHHHHHH-HCCCEEEEeccCc-ccCc------------CCHHHHHHhhc---cCceEEEEcCCCCCCCcc
Confidence 99999999998755443 3343332221111 1110 17888888886 367777776555556765
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhc
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~ 230 (368)
. +.+++++|+++|++||+++|+||+|+++ +.+.......+ +..+.+.|+||.++ +|+|+||+++++++++.+.
T Consensus 198 ~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~ 276 (404)
T 2o1b_A 198 A-TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALK 276 (404)
T ss_dssp C-CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHH
Confidence 4 5666999999999999999999999887 44432111111 22344678999998 8999999999999888876
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
. .....+++.++++++++.++++.. +++.++.++..+..++.+.+.+.+.+.....+..+.++|+.+..
T Consensus 277 ~---~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~------ 345 (404)
T 2o1b_A 277 K---YQTHTNAGMFGALQDAAIYALNHY--DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPP------ 345 (404)
T ss_dssp H---HHHHHCCCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCT------
T ss_pred H---HHhhccCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCC------
Confidence 2 233445678999999988888753 22344444444444444444444344433223334557777631
Q ss_pred chhcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 346 -------~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 346 -------GYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp -------TCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred -------CCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 112467888887 5799999863 2345676666889999999999998865
No 61
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.97 E-value=1.1e-30 Score=240.31 Aligned_cols=323 Identities=16% Similarity=0.136 Sum_probs=218.3
Q ss_pred cCCCcHHHHHHHHHHHHcCC--CCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 7 LFPSYLQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.++.+|++++++.+++.+.. .++.+.....++++.+++++ + +.+++++++||++|+..+++.+ ..+++.
T Consensus 47 ~~~~~~~v~~a~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~--~~~gd~ 124 (407)
T 2zc0_A 47 ELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVL--IDPGDV 124 (407)
T ss_dssp TTSCHHHHHHHHHHHHHHCGGGGSCCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCE
T ss_pred hhCCHHHHHHHHHHHHhhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHh--cCCCCE
Confidence 35567889999999887631 11223334556666666665 4 4689999999999999999877 346789
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHH----cCCCCeEEEEEccc-CCC
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE----NNKGEIAAIILEPV-VGN 152 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~----~~~~~~~~~~~~~~-~~~ 152 (368)
|++..++|++.... +...|..+...+... .+ .|+++|++.++ ++ ++++++++.++ +++
T Consensus 125 vl~~~p~~~~~~~~-~~~~g~~~~~v~~~~-~~--------------~d~~~l~~~l~~~~~~~-~~~~~v~~~~~~~np 187 (407)
T 2zc0_A 125 VITENPSYINTLLA-FEQLGAKIEGVPVDN-DG--------------MRVDLLEEKIKELKAKG-QKVKLIYTIPTGQNP 187 (407)
T ss_dssp EEEEESCCHHHHHH-HHTTTCEEEEEEEET-TE--------------ECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTT
T ss_pred EEEeCCChHHHHHH-HHHcCCEEEEcccCC-CC--------------CCHHHHHHHHHhhhccc-CCceEEEECCCCCCC
Confidence 99999999885433 333333222111110 11 18999999997 42 36777755444 444
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc---CCCcchhhhhhhccCCccceeeeehHHHHH
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF---GVTPDLTTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~---~~~~di~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
+|.+ .+.+++++|+++|++||+++|+||+|+++ +.+.. .....+ +...++.|+||.+++|+|+||+++++++++
T Consensus 188 tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~ 266 (407)
T 2zc0_A 188 MGVT-MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILK 266 (407)
T ss_dssp TCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHH
T ss_pred CCcC-CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHH
Confidence 6655 45667999999999999999999999887 54432 222222 333467799999999999999999998888
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHH--c-c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--K-E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~--~-~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
.+.. .....+++.+++++.++.++++.. . + +...+++.++++++.+.|++... +.....+..+.++|+.+
T Consensus 267 ~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~ 341 (407)
T 2zc0_A 267 KVLM---QKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP--NAEFTKPIAGMFVMFFL 341 (407)
T ss_dssp HHHH---HHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCT--TSCBCCCSBSSEEEEEC
T ss_pred HHHH---HHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEecCCCcEEEEEEc
Confidence 7763 223345667889998888888643 1 1 34566667777777777765421 12222234456777776
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC--------CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF--------EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~--------~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
.. ..+..++.+.|+++ ||.+.++.. ..+|+++.. +++++++++++|++++++
T Consensus 342 ~~-------------~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 342 PE-------------GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp ST-------------TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred CC-------------CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 21 12347899999998 999998632 234555444 799999999999998865
No 62
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.97 E-value=5.4e-30 Score=231.14 Aligned_cols=314 Identities=13% Similarity=0.054 Sum_probs=217.0
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++ .+|++++++.+++... ..++.....+++++++++++ +.+++++++||++++..+++.+ ..+++.|++..+
T Consensus 26 ~~~~-~~~~v~~a~~~~~~~~--~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l--~~~gd~vl~~~~ 100 (354)
T 3ly1_A 26 NPLG-MSPKAQAAARDAVVKA--NRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAY--ASLEAQLVIPEL 100 (354)
T ss_dssp CSSC-CCHHHHHHHHHTGGGT--TSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEESS
T ss_pred CCCC-CCHHHHHHHHHHHhhC--cCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHH--hCCCCeEEECCC
Confidence 3444 7889999999988763 34466778999999999998 6789999999999999999876 346789999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++..... ...|..+...+......+ |+++++++++++ ++++++++++.++++|.+.+.+ .+
T Consensus 101 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~--------------d~~~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~-~l 163 (354)
T 3ly1_A 101 TYGDGEHFA-KIAGMKVTKVKMLDNWAF--------------DIEGLKAAVAAY-SGPSIVYLVNPNNPTGTITPAD-VI 163 (354)
T ss_dssp SCTHHHHHH-HHTTCEEEEECCCTTSCC--------------CHHHHHHHHHTC-SSCEEEEEESSCTTTCCCCCHH-HH
T ss_pred CchHHHHHH-HHcCCEEEEecCCCCCCC--------------CHHHHHHHhccC-CCCCEEEEeCCCCCcCCCcCHH-HH
Confidence 888764333 333333322222111111 899999999853 3577777666666677766633 37
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccC-ccc---ccc-CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EYF-GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~---~~~-~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
++|+++| +||+++|+||+|.++ ..+.. ... +.. +....+.|+||.++ +|+|+||+++++++++.+....
T Consensus 164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--- 239 (354)
T 3ly1_A 164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYV--- 239 (354)
T ss_dssp HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGT---
T ss_pred HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhc---
Confidence 7777777 699999999999887 54432 111 122 33455678999999 8999999999999998887432
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
..++.++++++++.++++.. ++.++.+++.+..++.+.+.+.+.++. ..++.+.++|+.+..
T Consensus 240 --~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~------------ 301 (354)
T 3ly1_A 240 --AGEKINFSGVDAALASMNDS---AFITYSKKSNDVSRQILLKALEDLKLP-YLPSEGNFVFHQLVV------------ 301 (354)
T ss_dssp --TCSCCCHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHTCC-BCCCCSSEEEEECSS------------
T ss_pred --CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHCCCe-ECCCCceEEEEECCC------------
Confidence 22678999999888877622 233333344444444444433333433 234556777776521
Q ss_pred ccHHHHHHHHHHHHcCeeecCCC----CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+..++.+.|.++||.+. +. ...+|+++. +++|+++++++|++++++
T Consensus 302 ---~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 ---PLKDYQTHMADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ---CHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 24788999999999998 42 233566654 889999999999999864
No 63
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=3.1e-31 Score=245.13 Aligned_cols=325 Identities=13% Similarity=0.134 Sum_probs=214.6
Q ss_pred cCCCcHHHHHHHHHHHHcC----CCCCCCChhHHHHHHHHHhhC----C----CCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 7 LFPSYLQVLAALGETMKKG----TSFGAPCLLENVLAEMVISAV----P----SIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~----~----~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.++.+|++++++.+++... ..|+ +.....++++.+++++ + +.+++++++||++++..+++.+ ..+
T Consensus 56 ~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l--~~~ 132 (425)
T 1vp4_A 56 ETFPRKELAEIAKEIIEKEYHYTLQYS-TTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLF--LDD 132 (425)
T ss_dssp GGSCHHHHHHHHHHHHHHSHHHHTSCC-CTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHH--CCT
T ss_pred ccCCHHHHHHHHHHHHhhcchhhcCCC-CCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHh--CCC
Confidence 4567789999999988753 2232 2233456666666655 4 3579999999999999999866 346
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC-----CCCeEEEEEccc
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-----KGEIAAIILEPV 149 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~-----~~~~~~~~~~~~ 149 (368)
++.|++..++|++....+.. .|..+...+... .+ .|++++++.+++. ..+++++++.++
T Consensus 133 gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~--------------~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 133 ESYCVLDDPAYLGAINAFRQ-YLANFVVVPLED-DG--------------MDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp TCEEEEEESCCHHHHHHHHT-TTCEEEEEEEET-TE--------------ECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred CCEEEEeCCCcHHHHHHHHH-cCCEEEEeccCC-CC--------------CCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 78999999999886544332 333222111110 11 1899999999741 126777754444
Q ss_pred -CCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc---CCCcchhhhhhhccCCccceeeeehH
Q 017633 150 -VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF---GVTPDLTTLGKIIGGGLPVGAYGGRR 223 (368)
Q Consensus 150 -~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~---~~~~di~s~sK~~~~G~~iG~v~~~~ 223 (368)
++++|.+ .+.+++++|+++|++||+++|+||+|+++ +.+.. .....+ +....+.|+||.+++|+|+||+++++
T Consensus 197 ~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 275 (425)
T 1vp4_A 197 FHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK 275 (425)
T ss_dssp SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred CCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH
Confidence 4445655 45666999999999999999999999887 54432 222222 23344669999999899999999999
Q ss_pred HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc--c--CCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceE
Q 017633 224 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E--PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMF 298 (368)
Q Consensus 224 ~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~--~--~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~ 298 (368)
++++.+.. .....+++.|++++.++.++++... + +...++++++++++.+.|++..... +.....+..+.++
T Consensus 276 ~~~~~l~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~ 352 (425)
T 1vp4_A 276 EFIRKIVQ---AKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFI 352 (425)
T ss_dssp HHHHHHHH---HHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEE
T ss_pred HHHHHHHH---HhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEE
Confidence 88887763 2334556779999999888887531 1 2234445555666666665532110 2222223456677
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC--------CCccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------FEAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------~~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
|+.+.. ..+..++++.|+++||.+.++. ...+|+++.. +++++++++++|++++.+
T Consensus 353 ~~~~~~-------------~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 353 WLTLPE-------------GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp EEECCT-------------TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCC-------------CCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 877632 1123568889999999998863 2335665544 799999999999998754
No 64
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.97 E-value=4.5e-30 Score=234.76 Aligned_cols=324 Identities=11% Similarity=0.036 Sum_probs=215.9
Q ss_pred CCCcHHHHHHHHHHHHcCC-CCC-CCChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 8 FPSYLQVLAALGETMKKGT-SFG-APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~-~~~-~~~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+.+|++++++.+++.+.. .|+ ...+...++++++++.++ +.+++++++||++|++.+++.+ ..+++.|++..
T Consensus 44 ~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~--~~~gd~vl~~~ 121 (391)
T 4dq6_A 44 FKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINEL--TKANDKIMIQE 121 (391)
T ss_dssp SCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH--SCTTCEEEECS
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHh--CCCCCEEEEcC
Confidence 3467899999999887632 221 235677788888888765 4789999999999999999877 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
++|++....+.. .|..+...+.. ...+ ... -|+++++++++ + ++++++++.++++|.+.++.+
T Consensus 122 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~--------~~~---~d~~~l~~~l~---~-~~~v~i~~p~nptG~~~~~~~ 185 (391)
T 4dq6_A 122 PVYSPFNSVVKN-NNRELIISPLQKLENG--------NYI---MDYEDIENKIK---D-VKLFILCNPHNPVGRVWTKDE 185 (391)
T ss_dssp SCCTHHHHHHHH-TTCEEEECCCEECTTS--------CEE---CCHHHHHHHCT---T-EEEEEEESSBTTTTBCCCHHH
T ss_pred CCCHHHHHHHHH-cCCeEEeeeeeecCCC--------ceE---eeHHHHHHHhh---c-CCEEEEECCCCCCCcCcCHHH
Confidence 999886544433 33332221111 0011 000 18999999997 3 777777666666777655444
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc-----CCCcchhhhhhhcc-CCccceeeeehH-HHHHHhcCC
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-----GVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPA 232 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~-----~~~~di~s~sK~~~-~G~~iG~v~~~~-~~~~~~~~~ 232 (368)
+++|+++|++||+++|+||+|+++ +.|.. .....+ +....+.|+||.++ +|+|+||+++++ ++++.+...
T Consensus 186 -l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~ 264 (391)
T 4dq6_A 186 -LKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDA 264 (391)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999887 54432 122121 22234668999998 899999998864 777776631
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEEeec-cceEEEEeecCCCccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGYI-SGMFGFFFTEGPVYNF 310 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~ 310 (368)
.....+++.++++++++.++++.. +++.++..++.+..++.+.+.+.+ .+......+. +.+.|+.+...
T Consensus 265 --~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----- 335 (391)
T 4dq6_A 265 --FTRIDIKRNNCFSLVATEASYNNG--ESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSAL----- 335 (391)
T ss_dssp --HHHTTCCCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGG-----
T ss_pred --HHhhcCCCCCHHHHHHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhc-----
Confidence 112345578899999988888743 233444444444444444444433 2222223333 34445665310
Q ss_pred chhcccccHHHHHHHHHHHHc-CeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 311 EDAKKSETTKFARFYRGMLEE-GVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..+..++.+.|+++ ||.+.++.. ..+|+++..+++++++++++|+++++
T Consensus 336 -------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 391 (391)
T 4dq6_A 336 -------GLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAIN 391 (391)
T ss_dssp -------CCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred -------CCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 12357899999998 999988632 34677777899999999999998863
No 65
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=2.4e-30 Score=236.46 Aligned_cols=318 Identities=16% Similarity=0.133 Sum_probs=214.7
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 7 LFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
++ .+|.+++++.+++......+.+.....++++.+++++ + +++++++++||++|+..+++.+ ..+++.|+
T Consensus 53 ~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l--~~~gd~Vl 129 (389)
T 1o4s_A 53 FP-TPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMAL--LDPGDEVI 129 (389)
T ss_dssp SC-CCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEE
T ss_pred CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHh--CCCCCEEE
Confidence 44 3788999999988663222222233456666666654 3 4679999999999999999876 34678999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|++....+ ...|..+...+.....++. -|+++++++++ ++++++++++.++++|.+. +
T Consensus 130 ~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~ 192 (389)
T 1o4s_A 130 VFSPVWVSYIPQI-ILAGGTVNVVETFMSKNFQ------------PSLEEVEGLLV---GKTKAVLINSPNNPTGVVY-R 192 (389)
T ss_dssp EEESCCTTHHHHH-HHTTCEEEEEECCGGGTTC------------CCHHHHHHTCC---TTEEEEEEESSCTTTCCCC-C
T ss_pred EcCCCchhHHHHH-HHcCCEEEEEecCCccCCC------------CCHHHHHHhcc---cCceEEEEcCCCCCCCCCC-C
Confidence 9999998865443 3333333221111100100 17999999886 3677777766666677655 4
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
.+++++|+++|++||+++|+||+|+++ ..+.......+ +....+.|+||.++ +|+|+||+++++++++.+..
T Consensus 193 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~-- 270 (389)
T 1o4s_A 193 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK-- 270 (389)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHH--
Confidence 556999999999999999999999877 44422222222 33334568999998 89999999999988887762
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.....+++.+++++.++.++++.. -+.+.+++.++++++.+.|++. ++....+..+.++|+.+.
T Consensus 271 -~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~---------- 334 (389)
T 1o4s_A 271 -IQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKM----GVKFVEPEGAFYLFFKVR---------- 334 (389)
T ss_dssp -HHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSBSSEEEEECS----------
T ss_pred -HhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhc----CCeeecCCcceEEEEeCC----------
Confidence 334456778888888877766421 1334566666677776666653 332222333555666552
Q ss_pred cccccHHHHHHHHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 314 KKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..++.+.|+ ++||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 335 -----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 335 -----GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp -----SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred -----CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 12467889997 88999988742 345676667999999999999998854
No 66
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.97 E-value=3.2e-30 Score=236.23 Aligned_cols=316 Identities=11% Similarity=0.034 Sum_probs=212.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCC---CChhHHHHHHHHHhhCC----CCC-eEEEeCChHHHHHHHHHHHHHhcCC----ce
Q 017633 10 SYLQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP----SIE-MVRFVNSGTEACMGVLRLARAFTGR----ER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~----~~~-~v~~~~~gt~a~~~al~~~~~~~~~----~~ 77 (368)
.+|.+++++.+++.....|+. ..+...++++++.+.++ +++ ++++++||++++..+++.+.. +++ +.
T Consensus 44 ~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~-~g~~~~~d~ 122 (396)
T 3jtx_A 44 TPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLN-PVSDGIKPA 122 (396)
T ss_dssp CCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCC-C---CCCCE
T ss_pred CCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhC-CCCccCCCE
Confidence 678999999998765434432 23455556666655554 266 999999999999999987732 222 68
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
|++..++|++....+. ..|..+...+.. ..++. -|+++++++++. ++++++++..+|++|.+.
T Consensus 123 vl~~~p~~~~~~~~~~-~~g~~~~~v~~~-~~g~~------------~d~~~l~~~~~~---~~~~v~l~~p~nptG~~~ 185 (396)
T 3jtx_A 123 IVSPNPFYQIYEGATL-LGGGEIHFANCP-APSFN------------PDWRSISEEVWK---RTKLVFVCSPNNPSGSVL 185 (396)
T ss_dssp EEEEESCCHHHHHHHH-HTTCEEEEEECC-TTTCC------------CCGGGSCHHHHH---TEEEEEEESSCTTTCCCC
T ss_pred EEEcCCCcHhHHHHHH-HcCCEEEEeecC-CCCCc------------cCHHHHHHhhcc---CcEEEEEECCCCCCCCcC
Confidence 9999999987654433 333333222221 11111 078888888874 577777665566667666
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc-cCcccc--------ccCCCcchhhhhhhcc-CCccceeeeehHHHH
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQE--------YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 226 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g-~~~~~~--------~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~ 226 (368)
+.++ +++|+++|++||+++|+||+|.++ +.+ ...... ..+..+++.|+||.++ +|+|+||++++++++
T Consensus 186 ~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (396)
T 3jtx_A 186 DLDG-WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELL 264 (396)
T ss_dssp CHHH-HHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHH
T ss_pred CHHH-HHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHH
Confidence 5444 999999999999999999999988 554 222211 1445566789999988 789999999999998
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
+.+.. .....+++.++++++++.++++ .+++.++.+++.+..++.+.+.+.+. .....+..+.++|+.+..
T Consensus 265 ~~~~~---~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~-- 335 (396)
T 3jtx_A 265 KNFLL---YRTYHGSAMSIPVQRASIAAWD---DEQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPD-- 335 (396)
T ss_dssp HHHHH---HHHHHTCCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTT--
T ss_pred HHHHH---HHhhcccCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCC--
Confidence 88762 3344567889999999888876 23344445555555555555544433 122233446677777631
Q ss_pred CcccchhcccccHHHHHHHHHHHH-cCeeecCCCC------------CccccccCCCHHHHHHHHHHHHHHH
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF------------EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~------------~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+..++++.|++ +||.+.++.. ..+|+++..+++++++++++|++++
T Consensus 336 ------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 336 ------------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp ------------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred ------------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 124678888864 6999988632 3456777779999999999999875
No 67
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.97 E-value=1.3e-30 Score=238.40 Aligned_cols=318 Identities=14% Similarity=0.085 Sum_probs=206.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.+++.+....+.+.....++++.+++++ + +.+++++|+||++|+..+++.+ ..+++.|++..
T Consensus 45 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l--~~~gd~vl~~~ 122 (391)
T 3h14_A 45 APRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTAL--FDSGDRVGIGA 122 (391)
T ss_dssp SCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH--CCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHh--cCCCCEEEEcC
Confidence 3788999999988653222222223456666666654 2 5789999999999999999876 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++....+. ..|..+.........++. -|++++++. +++++++++.++++|.+.+.+ .
T Consensus 123 p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~------------~d~~~l~~~------~~~~v~i~~p~nptG~~~~~~-~ 182 (391)
T 3h14_A 123 PGYPSYRQILR-ALGLVPVDLPTAPENRLQ------------PVPADFAGL------DLAGLMVASPANPTGTMLDHA-A 182 (391)
T ss_dssp SCCHHHHHHHH-HTTCEEEEEECCGGGTTS------------CCHHHHTTS------CCSEEEEESSCTTTCCCCCHH-H
T ss_pred CCCccHHHHHH-HcCCEEEEeecCcccCCC------------CCHHHHHhc------CCeEEEECCCCCCCCccCCHH-H
Confidence 99987654333 333332221111111110 177877655 355555555566667666544 4
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc-CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF-GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAG 239 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~-~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~ 239 (368)
+++|+++|++||+++|+||+|+++ +.+.......+ +....+.|+||.++ +|+|+||+++++++++.+.. .....
T Consensus 183 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~---~~~~~ 259 (391)
T 3h14_A 183 MGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVER---IAQNM 259 (391)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHH---HHHHT
T ss_pred HHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHH---HHhhh
Confidence 999999999999999999999988 55433222222 23344568999998 89999999999888887762 33446
Q ss_pred cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCcccchhccccc
Q 017633 240 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSET 318 (368)
Q Consensus 240 t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (368)
+++++++++.++.++++ .+++.++.+++.+..++.+.+.+.+.+...... ..+.++|+.+... .
T Consensus 260 ~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~ 324 (391)
T 3h14_A 260 FICAPHASQVAALAALD---CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDL------------T 324 (391)
T ss_dssp TCCCCHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTT------------C
T ss_pred ccCCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCcc------------C
Confidence 67888999988887776 223344444444444455544444444432222 3345666665310 1
Q ss_pred HHHHHHHHHHHHc-CeeecCCC-------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 319 TKFARFYRGMLEE-GVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 319 ~~~~~~~~~l~~~-Gi~~~~~~-------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..++++.|+++ ||.+.++. ...+|+++..+++++++++++|++++.+
T Consensus 325 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 325 DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 2357888998876 99998863 2245677777999999999999999865
No 68
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.4e-30 Score=239.88 Aligned_cols=320 Identities=17% Similarity=0.131 Sum_probs=211.4
Q ss_pred CcHHHHHHHHHHHHcC-CCCCCCChhHHHHHHHHHhhC----C---CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAV----P---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~----~---~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+++++.+++.+. ..|. +.....++++.+++++ + +.+ ++++++||++|+..+++.+ ..+++.|++
T Consensus 39 ~~~~v~~a~~~~~~~~~~~y~-~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~--~~~gd~Vl~ 115 (411)
T 2o0r_A 39 GPPKMLQAAQDAIAGGVNQYP-PGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL--VEPGSEVLL 115 (411)
T ss_dssp CCHHHHHHHHHHHHTTCCSCC-CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHH--CCTTCEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHh--cCCCCEEEE
Confidence 6789999999998763 2232 2222345555555553 3 356 8999999999999999876 346789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
..++|++.... +...|..+...+.... .+ .. .|+++++++++ ++++++++++.++++|.+. +
T Consensus 116 ~~~~y~~~~~~-~~~~g~~~~~v~~~~~~~~---------~~---~d~~~l~~~l~---~~~~~v~l~~~~nptG~~~-~ 178 (411)
T 2o0r_A 116 IEPFYDSYSPV-VAMAGAHRVTVPLVPDGRG---------FA---LDADALRRAVT---PRTRALIINSPHNPTGAVL-S 178 (411)
T ss_dssp EESCCTTHHHH-HHHTTCEEEEEECEEETTE---------EE---CCHHHHHHHCC---TTEEEEEEESSCTTTCCCC-C
T ss_pred eCCCcHhHHHH-HHHcCCEEEEeeccccccC---------CC---CCHHHHHHhhc---cCceEEEEeCCCCCCCCCC-C
Confidence 99999986443 3333433222111100 00 00 18999999986 3677777776666677655 5
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-ccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
.+++++|+++|++||+++|+||+|+++ +.|.. ..... .+..+.+.|+||.++ +|+|+||+++++++++.+..
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~- 257 (411)
T 2o0r_A 179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRA- 257 (411)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHH-
Confidence 566999999999999999999999887 54431 22222 233445679999998 89999999999988887762
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.....+++.++++++++.++++...+ +.+.+++.++++++.+.|++ .+.....+..+.++|+.+...
T Consensus 258 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~----- 326 (411)
T 2o0r_A 258 --AKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTE----IGFAVHDSYGTYFLCADPRPL----- 326 (411)
T ss_dssp --HHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HTCEECCCCBSSEEEEECGGG-----
T ss_pred --HHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCEecCCCeeEEEEEecCCC-----
Confidence 22344667788888888888874311 22344455555555555544 343322233455777776320
Q ss_pred chhcccccHHHHHHHHHHH-HcCeeecCCC-----------------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGML-EEGVYFAPSQ-----------------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 327 ------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 327 ------GYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp ------TCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC-
T ss_pred ------CCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 0012467888887 6799998752 2345677777999999999999987643
No 69
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.97 E-value=2.8e-30 Score=235.70 Aligned_cols=320 Identities=16% Similarity=0.152 Sum_probs=208.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|.+++++.+.+......+.+.....++++.+++++ + +++++++|+||++++..+++.+ ..++|.|++..
T Consensus 45 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l--~~~gd~Vlv~~ 122 (385)
T 1b5p_A 45 TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI--LDPGDEVIVLS 122 (385)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh--cCCCCEEEEcC
Confidence 3578999998887653222222223455555555544 3 3679999999999999999766 35678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++..... ...|..+.........++. .|+++++++++ ++++++++...+|++|.+++ .+.
T Consensus 123 p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~-~~~ 185 (385)
T 1b5p_A 123 PYWVSYPEMV-RFAGGVVVEVETLPEEGFV------------PDPERVRRAIT---PRTKALVVNSPNNPTGAVYP-KEV 185 (385)
T ss_dssp SCCTHHHHHH-HHTTCEEEEEECCGGGTTC------------CCHHHHHTTCC---TTEEEEEEESSCTTTCCCCC-HHH
T ss_pred CCchhHHHHH-HHcCCEEEEeecCcccCCC------------CCHHHHHHhcC---CCCEEEEEeCCCCCCCCCcC-HHH
Confidence 9987654333 3334333221111101110 17899998886 35666666555555666554 455
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc--CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF--GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~--~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~ 238 (368)
+++|+++|++||+++|+||+|.++ ..+....+..+ +....+.||||.++ +|+|+||+++++++++.+.. ....
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~---~~~~ 262 (385)
T 1b5p_A 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMAS---VSRQ 262 (385)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH---HHHT
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHH---HHhh
Confidence 999999999999999999999887 43322222222 22233568999999 79999999999988887762 2233
Q ss_pred ccCCCCHHHHHHHHHHHHH---Hcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh
Q 017633 239 GTLSGNPLAMTAGIHTLKR---LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~---~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
.+++++.+++.++.++++. ..+ +...++++++++++.+.|++. ++....+..+.++|..+...
T Consensus 263 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------- 330 (385)
T 1b5p_A 263 STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL----GLKAVRPSGAFYVLMDTSPI-------- 330 (385)
T ss_dssp TTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCBCCCSBTTEEEEECTTT--------
T ss_pred ccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCeeEEEEEecCCC--------
Confidence 4567888999888888763 211 223445555555665555553 33322333445566655210
Q ss_pred cccccHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 314 KKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+..++.+.|+++||.+.++.. ..+|+++..+++++++++++|++++.+
T Consensus 331 ----~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 331 ----APDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384 (385)
T ss_dssp ----CSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC--
T ss_pred ----CCCHHHHHHHHHHCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 11247789999999999998743 346777788999999999999887654
No 70
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=5e-30 Score=231.98 Aligned_cols=311 Identities=14% Similarity=0.068 Sum_probs=217.8
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++ .+|++++++.+++..... ++.....+++++++++++ +.+++++++||++|+..+++.+ +.|++..+
T Consensus 36 ~~~~-~~~~v~~a~~~~~~~~~~--y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~------d~vi~~~~ 106 (361)
T 3ftb_A 36 NPLG-IPKSFLNNIDEGIKNLGV--YPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF------EKILIIVP 106 (361)
T ss_dssp CTTC-SCHHHHTTHHHHHHGGGS--CCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC------SEEEEEES
T ss_pred CCCC-CCHHHHHHHHHHHHHhcC--CCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc------CcEEEecC
Confidence 4444 578999999998877433 355667899999999997 6789999999999999999754 78999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++....... .|..+...+.....++ ++++++++++. +++++++..++++|.+.+. +++
T Consensus 107 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~--------------~~~~l~~~l~~----~~~v~i~~p~nptG~~~~~-~~l 166 (361)
T 3ftb_A 107 SYAEYEINAKK-HGVSVVFSYLDENMCI--------------DYEDIISKIDD----VDSVIIGNPNNPNGGLINK-EKF 166 (361)
T ss_dssp CCTHHHHHHHH-TTCEEEEEECCTTSCC--------------CHHHHHHHTTT----CSEEEEETTBTTTTBCCCH-HHH
T ss_pred ChHHHHHHHHH-cCCeEEEeecCcccCC--------------CHHHHHHhccC----CCEEEEeCCCCCCCCCCCH-HHH
Confidence 99886544333 3333322212111122 68999999872 5555555555666765554 449
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCC---cchhhhhhhcc-CCccceeee-ehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT---PDLTTLGKIIG-GGLPVGAYG-GRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~---~di~s~sK~~~-~G~~iG~v~-~~~~~~~~~~~~~~~~~ 237 (368)
++|+++|++||+++|+||+|+++ +.+........+.. ..+.|+||.++ +|+|+||++ .++++++.+....
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~---- 242 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQ---- 242 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTS----
T ss_pred HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhC----
Confidence 99999999999999999999888 43112222222222 23458999999 899999997 8999988887432
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.+++.|+++++++.++++ ++++.++.+++.+..++.+.+.+.+.+... ...+.+.++++.+..
T Consensus 243 -~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~------------ 306 (361)
T 3ftb_A 243 -NPWNINCFAEMAAINCLK---DTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN------------ 306 (361)
T ss_dssp -CTTCSCHHHHHHHHHTSS---CHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS------------
T ss_pred -CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC------------
Confidence 356789999998887776 233445555555555666666555554333 556667787876631
Q ss_pred ccHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+..++.+.|.++||.+.++.. ..+|+++. +.++++++++.|+++.+.
T Consensus 307 --~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 307 --ISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp --SCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHhc
Confidence 2247899999999999998642 23455544 788889999999888765
No 71
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.2e-30 Score=240.22 Aligned_cols=325 Identities=13% Similarity=0.088 Sum_probs=209.6
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC----C---CC-CeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV----P---SI-EMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.++ .+|.+++++.+++.+...+++ +.....++++.+++++ + ++ +++++++||++|+..+++.+ ..+++
T Consensus 48 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~--~~~gd 124 (412)
T 2x5d_A 48 DGP-TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT--LDHGD 124 (412)
T ss_dssp CSC-CCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH--CCTTC
T ss_pred CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh--CCCCC
Confidence 344 678999999888765322222 3444567777777766 4 34 69999999999999999876 34678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++..++|++....+.. .|..+...+.....++ . .|+++++++++ ++++++++...++++|.+
T Consensus 125 ~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~---------~---~d~~~l~~~i~---~~~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 125 TILVPNPSYPIHIYGAVI-AGAQVRSVPLVPGIDF---------F---NELERAIRESI---PKPRMMILGFPSNPTAQC 188 (412)
T ss_dssp EEEEEESCCHHHHHHHHH-HTCEEEEEECSTTSCH---------H---HHHHHHHHTEE---SCCSEEEEESSCTTTCCC
T ss_pred EEEEcCCCchhHHHHHHH-cCCEEEEeecCCccCC---------C---CCHHHHHHhcc---cCceEEEECCCCCCCCCc
Confidence 999999999986554433 3333221111110010 0 16788888876 345555554444556655
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-Cccccc----cCCCcchhhhhhhcc-CCccceeeeehHHHHHHh
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~ 229 (368)
. +.+++++|+++|++||+++|+||+|+++ +.|. ...... .+....+.|+||.++ +|+|+||+++++++++.+
T Consensus 189 ~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 267 (412)
T 2x5d_A 189 V-ELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL 267 (412)
T ss_dssp C-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHH
Confidence 4 5566999999999999999999999887 5443 112222 233344678999999 899999999999988887
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.. .....+++.+++++.++.++++...+ +.+.++++++++++.+.|++. +.....+..+.++|+.+....
T Consensus 268 ~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~- 339 (412)
T 2x5d_A 268 AR---IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA----GWMVENPKASMYVWAKIPEPY- 339 (412)
T ss_dssp HH---HHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCCCCSBSSEEEEECCTTT-
T ss_pred HH---HHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCEecCCCeeeEEEEEcCCcc-
Confidence 63 33445678899999998888773211 223344445555555555543 333222233556777662110
Q ss_pred cccchhcccccHHHHHHHHHHHH-cCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|++ +||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 340 ---------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 340 ---------AHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp ---------GGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 00134678888875 6999998632 345776667999999999999998865
No 72
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=1.1e-29 Score=232.74 Aligned_cols=319 Identities=18% Similarity=0.218 Sum_probs=227.0
Q ss_pred ceeccC-CCcHHHHHHHHHHHHcCCC------C-CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILF-PSYLQVLAALGETMKKGTS------F-GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g-~~~~~v~~a~~~~~~~~~~------~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.+++| +.+|++++++.+++.+... + +...+...+++++++++++..+ .+++++|++|+..+++.+ ..+
T Consensus 50 ~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-~i~~~sGt~a~~~~l~~~--~~~ 126 (399)
T 3tqx_A 50 ANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTDD-TILYSSCFDANGGLFETL--LGP 126 (399)
T ss_dssp SCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCSE-EEEESCHHHHHHTTHHHH--CCT
T ss_pred ccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCCc-EEEECchHHHHHHHHHHh--cCC
Confidence 346788 6899999999998876211 1 2245678999999999987444 555557899999988766 345
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCC---CeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG---EIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~---~~~~~~~~~~~~ 151 (368)
++.|++..+.|.. ....+...+. +++.++..|++++++.+++..+ +++++++++.++
T Consensus 127 gd~v~~~~~~~~~-~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 186 (399)
T 3tqx_A 127 EDAIISDELNHAS-IIDGIRLCKA-------------------QRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFS 186 (399)
T ss_dssp TCEEEEETTCCHH-HHHHHHSCCS-------------------EEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEET
T ss_pred CCEEEECCcccHH-HHHHHHHcCC-------------------ceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCC
Confidence 6677776655543 3333333333 2334444588899999886322 788999999888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCC--Ccchh--hhhhhccCCccceeeeehHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRRDI 225 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~--~~di~--s~sK~~~~G~~iG~v~~~~~~ 225 (368)
++|.+.+ +++|+++|++||+++|+||+| .++ ........+.+++ .+|++ |+||+++ |++.||+++++++
T Consensus 187 ptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-g~~gG~~~~~~~~ 261 (399)
T 3tqx_A 187 MDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG-GASGGYTSGHKEI 261 (399)
T ss_dssp TTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC-SSCCEEEEECHHH
T ss_pred CCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc-cCceEEEEcCHHH
Confidence 8999888 999999999999999999999 454 2111123445554 56766 8999998 6788999999998
Q ss_pred HHHhcCCCCccccccCCCCHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 226 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
++.+....... ..+.+.++++++++.++++.+ .. +.+.++++++++++++.|++. +... ..+.++++++.+.
T Consensus 262 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~~~~~~~~~ 335 (399)
T 3tqx_A 262 IEWLRNRSRPY-LFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL----GFQL-VPGNHPIIPVMLG 335 (399)
T ss_dssp HHHHHHHCHHH-HSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH----TCCB-CCCSSSEEEEEEE
T ss_pred HHHHHHhCcce-eccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc----CCCc-CCCCCCEEEEEeC
Confidence 88876422111 123467889999998888876 21 445677777777777777765 3322 2556777787763
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------Cccccc--cCCCHHHHHHHHHHHHHHHhhC
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~~~--~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++++.|+++||.+.++.. ..+|++ ...+++++++++++|+++++++
T Consensus 336 -------------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 336 -------------DAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -------------CHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -------------CHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 334568899999999999996532 234554 3679999999999999998763
No 73
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=1e-29 Score=230.13 Aligned_cols=309 Identities=13% Similarity=0.072 Sum_probs=212.6
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
+++ .+|++++++.+++.. ..+++.....+++++++++++ +.+++++++||+++++.+++.+ ..+++.|++..++
T Consensus 43 ~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~ 117 (363)
T 3ffh_A 43 PLG-TSKKVAAIQANSSVE--TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVL--LDTTTNTVMATPT 117 (363)
T ss_dssp TTC-CCHHHHHHHHTCBSC--CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH--CSTTCEEEEEESS
T ss_pred CCC-CCHHHHHHHHHHHHH--hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCC
Confidence 444 678999999887654 234456667899999999998 6789999999999999999876 3567899999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|++....... .|..+...+... .+.. |++++++.++ ++++++++++.++++|.+.+ .+.+.
T Consensus 118 ~~~~~~~~~~-~g~~~~~v~~~~-~~~~-------------d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~-~~~l~ 178 (363)
T 3ffh_A 118 FVQYRQNALI-EGAEVREIPLLQ-DGEH-------------DLEGMLNAID---EKTTIVWICNPNNPTGNYIE-LADIQ 178 (363)
T ss_dssp CHHHHHHHHH-HTCEEEEEECCT-TSCC-------------CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC-HHHHH
T ss_pred hHHHHHHHHH-cCCEEEEecCCC-CCCc-------------CHHHHHHhcc---cCCCEEEEeCCCCCcCCCcC-HHHHH
Confidence 8875443333 333332222211 1111 8999999997 46888877777777787776 22255
Q ss_pred HHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcc----hhhhhhhcc-CCccceeeeehHHHHHHhcCCCCcccc
Q 017633 165 AIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD----LTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQA 238 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~d----i~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~ 238 (368)
+++++|++ |+++|+||+|+++ + +...........++ +.|+||.++ +|+|+||+++++++++.+....
T Consensus 179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~----- 251 (363)
T 3ffh_A 179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVR----- 251 (363)
T ss_dssp HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTC-----
T ss_pred HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhC-----
Confidence 55555555 9999999999988 5 43322211111122 568999999 8999999999999988887432
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+++.++++++++.++++ +.++.+..+++.+..++.+.+.+.+ .+.. ..+..+.++++.+..
T Consensus 252 ~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~------------- 314 (363)
T 3ffh_A 252 PPFNTTSIGQKLAIEAIK---DQAFIGECRTSNANGIKQYEAFAKRFEKVK-LYPANGNFVLIDLGI------------- 314 (363)
T ss_dssp CSCCCBHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCCSSEEEEECSS-------------
T ss_pred CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHhhCCCce-ECCCCCeEEEEECCC-------------
Confidence 366789999999988886 2234445555555555555555544 3332 345566777776521
Q ss_pred cHHHHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHH
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
+..++.+.|.++||.+.++.. ..+|+++. +++|+++++++|++++
T Consensus 315 --~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 315 --EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKLL 363 (363)
T ss_dssp --CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHhC
Confidence 247899999999999998753 34566655 8999999999999864
No 74
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.97 E-value=1.7e-30 Score=236.47 Aligned_cols=316 Identities=11% Similarity=0.003 Sum_probs=211.5
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCC---ChhHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAP---CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
++++ .+|.+++++.+++.....|+.+ .+...++++++.+.++ +.+++++++||++++..+++.+....+++.|
T Consensus 33 ~~~~-~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~v 111 (376)
T 3ezs_A 33 PQFE-TPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTI 111 (376)
T ss_dssp CCSC-CCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCC-CCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEE
Confidence 3444 6789999998887543333321 2344445555544445 5789999999999999999877331117899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++..++|++...... ..|..+...+.....++ ++ ++++.+.. ++++++++..++++|.+.+
T Consensus 112 l~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~--------------~~-~l~~~~~~---~~~~v~~~~p~nptG~~~~ 172 (376)
T 3ezs_A 112 AYPNPFYQIYEGAAK-FIKAKSLLMPLTKENDF--------------TP-SLNEKELQ---EVDLVILNSPNNPTGRTLS 172 (376)
T ss_dssp EEEESCCTHHHHHHH-HTTCEEEEEECCGGGTS--------------CC-CCCHHHHH---HCSEEEECSSCTTTCCCCC
T ss_pred EEecCCcHhHHHHHH-HcCCEEEEcccCCCCCc--------------ch-hHHhhhcc---CCCEEEEcCCCCCcCCCCC
Confidence 999999987654433 33333222111111111 22 44555552 4556666555555666554
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccc---------ccCCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE---------YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~---------~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
.+++++|+++|++||+++|+||+|.++ +.+...... ..+..+.+.|+||.++ +|+|+||+++++++++
T Consensus 173 -~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 251 (376)
T 3ezs_A 173 -LEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLE 251 (376)
T ss_dssp -HHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred -HHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHH
Confidence 455999999999999999999999988 544332221 2444566779999997 8999999999999988
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
.+.. .....+++.++++++++.++++ .++..++.+++.+..++.+.+.+. ++. .+..+.++|+.+.
T Consensus 252 ~~~~---~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~---- 317 (376)
T 3ezs_A 252 KYKA---FRAYLGYTSANAIQKASEAAWL---DDRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQ---- 317 (376)
T ss_dssp HHHH---HHTTTCCCCCHHHHHHHHHHHH---CSHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECS----
T ss_pred HHHH---HHhhhcCCCChHHHHHHHHHHh---CcHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECC----
Confidence 8763 3344567889999999888877 233445555555555555555443 322 4456677777652
Q ss_pred cccchhcccccHHHHHHHHHHHH-cCeeecCCCC--------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF--------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~--------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+..++++.|++ +||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 318 ------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 318 ------------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp ------------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred ------------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 24788999988 8999987632 335676667999999999999999864
No 75
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.97 E-value=1.8e-30 Score=238.79 Aligned_cols=321 Identities=10% Similarity=0.090 Sum_probs=216.3
Q ss_pred CcHHHHHHHHHHHHcCC--CCC---CCChhHHHHHHHHHhhCC-C--C-CeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP-S--I-EMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~-~--~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|++++++.+++.+.. .|+ ...+...++++++++.++ + + +++++++||++|+..+++.+ ..+++.|++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l--~~~gd~vl~ 131 (407)
T 3nra_A 54 PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT--VARGDKVAI 131 (407)
T ss_dssp CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT--CCTTCEEEE
T ss_pred CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh--CCCCCEEEE
Confidence 67889999999887531 121 234577788888888776 2 3 79999999999999999765 356789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCC-----CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLP-----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
..++|++.... +...|..+...... ...... |++++++.+++ ++++++++..++++|.
T Consensus 132 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~---~~~~v~~~~p~nptG~ 194 (407)
T 3nra_A 132 VQPDYFANRKL-VEFFEGEMVPVQLDYVSADETRAGL-------------DLTGLEEAFKA---GARVFLFSNPNNPAGV 194 (407)
T ss_dssp EESCCTHHHHH-HHHTTCEEEEEEBCCCSSCCSSCCB-------------CHHHHHHHHHT---TCCEEEEESSCTTTCC
T ss_pred cCCcccchHHH-HHHcCCEEEEeecccccccCcCCCc-------------CHHHHHHHHhh---CCcEEEEcCCCCCCCc
Confidence 99888865433 33334333221110 011111 89999999984 4555555444566676
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc-----CCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~-----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
+. +.+++++|+++|++||+++|+||+|+++ +.+.. ...... +..+.+.|+||.++ +|+|+||+++++++++
T Consensus 195 ~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 273 (407)
T 3nra_A 195 VY-SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIA 273 (407)
T ss_dssp CC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHH
T ss_pred cc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHH
Confidence 55 5555999999999999999999999887 54432 222222 23345678999999 8999999999999888
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.+.. .....+++.++++++++.++++ ..+++.+...++.+..++.+.+.+.+. ++....+..+.++|+.+..
T Consensus 274 ~l~~---~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-- 346 (407)
T 3nra_A 274 RMEK---LQAIVSLRAAGYSQAVLRGWFD--EAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPK-- 346 (407)
T ss_dssp HHHH---HHHHHTSSSCHHHHGGGGGTTC--CCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCC--
T ss_pred HHHH---HHhhhccCCChHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCC--
Confidence 8763 3344566778888777666554 123455555555666666666655555 3322223334565655421
Q ss_pred CcccchhcccccHHHHHHHHHHHH-cCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++.+.|++ +||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 347 ----------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 347 ----------LAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp ----------BSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 12235788898876 5999998642 345677777999999999999999865
No 76
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.97 E-value=7.9e-30 Score=236.65 Aligned_cols=324 Identities=10% Similarity=-0.014 Sum_probs=213.4
Q ss_pred CcHHHHHHHHHHHHcCC-CCCCCChhHHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHHhcCCc--eEE
Q 017633 10 SYLQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARAFTGRE--RII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~~~~~~--~vi 79 (368)
.+|++++++.+++.... ..+.+.....++++.++++++ ..+++++|+||++++..+++.+....+++ .|+
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl 137 (437)
T 3g0t_A 58 APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTL 137 (437)
T ss_dssp CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEE
T ss_pred CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEE
Confidence 68899999999887533 222222223566666666553 47899999999999999998773114677 899
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|++....+... |..+...... ..++ . -|+++++++++. ++++++++...++++|.+.+.
T Consensus 138 ~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~~~---------~---~d~~~l~~~l~~--~~~~~v~l~~p~nptG~~~~~ 201 (437)
T 3g0t_A 138 FIDPGFNLNKLQCRIL-GQKFESFDLF-EYRG---------E---KLREKLESYLQT--GQFCSIIYSNPNNPTWQCMTD 201 (437)
T ss_dssp EEESCCHHHHHHHHHH-TCCCEEEEGG-GGCT---------T---HHHHHHHHHHTT--TCCCEEEEESSCTTTCCCCCH
T ss_pred EeCCCcHhHHHHHHHc-CCEEEEEeec-CCCC---------c---cCHHHHHHHHhc--CCceEEEEeCCCCCCCCcCCH
Confidence 9999998865444433 3322211111 0110 0 078999999942 355555543335556765554
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcccC---------ccccc-cCCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYG---------GAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~---------~~~~~-~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
+.+++|+++|++||++||+||+|+++ ..+.. ..... .+....+.|+||.++ +|+|+||+++++++++
T Consensus 202 -~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 202 -EELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYE 280 (437)
T ss_dssp -HHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHH
T ss_pred -HHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhh
Confidence 44999999999999999999999877 43221 11111 333344668999999 8999999999998888
Q ss_pred -H-----------------hcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 017633 228 -M-----------------VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHA 288 (368)
Q Consensus 228 -~-----------------~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 288 (368)
. +. ......+++.+++++.++.++++.... +...+...++.+..++.+.+.+.+.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 357 (437)
T 3g0t_A 281 REYPDLEESFGRLRFGEALSS---SALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFN 357 (437)
T ss_dssp CBCGGGHHHHSCSBHHHHHHT---THHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred hhhhcccccccccchhHHHHH---HHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 6 55 233445678899999999999886532 1113344444444444444444434432
Q ss_pred eE------Ee-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC------CccccccCC-CHHHH
Q 017633 289 IC------GG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAH-SSDDI 354 (368)
Q Consensus 289 ~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~-~~~~i 354 (368)
.. .+ ..+.++|+.+. ..+..++.+.|+++||.+.++.. ..+|+++.. +++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i 423 (437)
T 3g0t_A 358 IVYDKDGNEPLADGFYFTVGYK--------------GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQF 423 (437)
T ss_dssp ESSCEETTEECCSSSEEEEEET--------------TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGH
T ss_pred EeccccCCCCCceeEEEEEecC--------------CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHH
Confidence 22 13 45667777763 12357899999999999998753 345654444 89999
Q ss_pred HHHHHHHHHHHhh
Q 017633 355 QHTITAAEKVLRQ 367 (368)
Q Consensus 355 ~~~~~~l~~~l~~ 367 (368)
++++++|++++++
T Consensus 424 ~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 424 PDLEKRLQMLNAE 436 (437)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998764
No 77
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.97 E-value=2e-29 Score=232.02 Aligned_cols=337 Identities=12% Similarity=0.026 Sum_probs=219.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC-ChhHHHHHHHHHhhC----C---CC-CeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAV----P---SI-EMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~----~---~~-~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|++++++.+++......+++ .....++++.+++++ + .+ +++++++||++++..+++.+ ..+++.|++
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~--~~~gd~vl~ 114 (410)
T 3e2y_A 37 PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGL--VDPGDEVII 114 (410)
T ss_dssp CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH--CCTTCEEEE
T ss_pred CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh--cCCCCEEEE
Confidence 4678999999988753221222 222345555555543 2 34 79999999999999999876 356788999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCC--CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
..++|++..... ...|..+....... ..+. ........ -|+++++++++ ++++++++++.++++|.+++
T Consensus 115 ~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~g~----~~~~~~~~-~d~~~l~~~~~---~~~~~v~~~~p~nptG~~~~ 185 (410)
T 3e2y_A 115 MVPFYDCYEPMV-RMAGAVPVFIPLRSKPTDGM----KWTSSDWT-FDPRELESKFS---SKTKAIILNTPHNPLGKVYT 185 (410)
T ss_dssp EESCCTTHHHHH-HHTTCEEEEEECEECCCCSS----CCBGGGEE-CCHHHHHTTCC---TTEEEEEEESSCTTTCCCCC
T ss_pred eCCCchhhHHHH-HHcCCEEEEEeccccccccc----cccccCCc-CCHHHHHhhcC---CCceEEEEeCCCCCCCcCcC
Confidence 999998765433 33333322211110 0000 00000000 17899998886 46888888777777777664
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC-cccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHHHhcC
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~ 231 (368)
.+.+++|+++|++||+++|+||+|+++ +.+.. .....+ +....+.|+||.++ +|+|+||+++++++++.+.
T Consensus 186 -~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~- 263 (410)
T 3e2y_A 186 -RQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQ- 263 (410)
T ss_dssp -HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHH-
T ss_pred -HHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHH-
Confidence 445999999999999999999999987 55432 222222 22345668999999 8999999999999888776
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHH-----HccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKR-----LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
......+++.+++++.++.++++. ...+.+.++..++.+..++.+.+.+.+.+.....+..+.++|+.+....
T Consensus 264 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 341 (410)
T 3e2y_A 264 --TVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG 341 (410)
T ss_dssp --HHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred --HHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence 233456778899999999888874 1124455666666666666666666556655455566777787765321
Q ss_pred CcccchhcccccHHHHHHHHHHH-HcCeeecCCCC-----------CccccccCCCHHHHHHHHHHHHH
Q 017633 307 VYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-----------EAGFTSLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~-----------~~~~~~~~~~~~~i~~~~~~l~~ 363 (368)
. .... ...+.....+++..++ ++||.+.+++. ..+|+++..+++++++++++|++
T Consensus 342 ~-~~~~-~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 342 A-DLSD-MNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp C-CCTT-CCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred c-cccc-ccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 0 0000 0001122357777665 67999988643 23577888899999999999975
No 78
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.97 E-value=1.9e-29 Score=231.35 Aligned_cols=322 Identities=15% Similarity=0.074 Sum_probs=209.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.+++.... ..++.. ..++++.+++++ + +.+++++++||++|+..+++.+ ..+++.|++..
T Consensus 45 ~~~~v~~a~~~~~~~~~-~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l--~~~gd~vl~~~ 120 (399)
T 1c7n_A 45 NPPELIEGLKKYLDETV-LGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREF--TKPGDGVIIIT 120 (399)
T ss_dssp CCHHHHHHHHHHHHHCC-CSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH--CCTTCEEEECS
T ss_pred CCHHHHHHHHHHHhcCC-CCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh--cCCCCEEEEcC
Confidence 57899999999886532 222322 556666666653 3 4679999999999999999876 24578999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++....+. ..|..+...+.....+ ... .|++++++.+++ ++++++++...++++|.+. +.++
T Consensus 121 p~~~~~~~~~~-~~g~~~~~~~~~~~~g--------~~~---~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~-~~~~ 185 (399)
T 1c7n_A 121 PVYYPFFMAIK-NQERKIIECELLEKDG--------YYT---IDFQKLEKLSKD--KNNKALLFCSPHNPVGRVW-KKDE 185 (399)
T ss_dssp SCCTHHHHHHH-TTTCEEEECCCEEETT--------EEE---CCHHHHHHHHTC--TTEEEEEEESSBTTTTBCC-CHHH
T ss_pred CCcHhHHHHHH-HcCCEEEecccccCCC--------CEE---EcHHHHHHHhcc--CCCcEEEEcCCCCCCCcCc-CHHH
Confidence 99988654433 2333222211100000 000 189999999974 3577777655555567654 5666
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hccc-Cccccc-----cCCCcchhhhhhhcc-CCccceeeeeh-HHHHHHhcCCC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY-----FGVTPDLTTLGKIIG-GGLPVGAYGGR-RDIMEMVAPAG 233 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~-----~~~~~di~s~sK~~~-~G~~iG~v~~~-~~~~~~~~~~~ 233 (368)
+++|+++|++||++||+||+|+++ +.+. ...... .+....+.|+||.++ +|+|+||++++ +++++.+..
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~-- 263 (399)
T 1c7n_A 186 LQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTK-- 263 (399)
T ss_dssp HHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHH--
Confidence 999999999999999999999887 5443 222222 233345679999999 89999999886 668877763
Q ss_pred CccccccC-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEEeecc-ceEEEEeecCCCccc
Q 017633 234 PMYQAGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGYIS-GMFGFFFTEGPVYNF 310 (368)
Q Consensus 234 ~~~~~~t~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 310 (368)
.....++ +.++++++++.++++.. +++.++.++..+..++.+.+.+.+ .+......+.+ .++|+.+...
T Consensus 264 -~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----- 335 (399)
T 1c7n_A 264 -SRDATSGMPFTTLGYKACEICYKEC--GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRAL----- 335 (399)
T ss_dssp -HHHHTTCCCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGG-----
T ss_pred -HHhhcccCCCCHHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccC-----
Confidence 2222333 56889999888888642 233444444444444444444433 32111223334 4446665310
Q ss_pred chhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|+ ++||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 336 -------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 336 -------KMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKD 392 (399)
T ss_dssp -------CCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHH
Confidence 112467899998 68999998642 345777777789999999999998864
No 79
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=5.1e-29 Score=226.07 Aligned_cols=311 Identities=15% Similarity=0.099 Sum_probs=216.1
Q ss_pred ccCCCcHHHHHHHHHHHHcC--CCCCCCChhHHHHHHHHHhh------CC-CCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKG--TSFGAPCLLENVLAEMVISA------VP-SIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~l~~~l~~~------~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
+++ .+|++++++.+++.+. ....++.....++++.++++ ++ +.+++++++|++++++.+++.+ ..+++
T Consensus 41 ~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l--~~~gd 117 (369)
T 3cq5_A 41 PYP-PSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF--GGPGR 117 (369)
T ss_dssp CSC-CCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH--CSTTC
T ss_pred CCC-CCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh--cCCCC
Confidence 355 6889999999988652 11222333235788888887 55 5789999999999999999776 34678
Q ss_pred eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 77 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.|++..++|++..... ...|..+...+.. ... ..|++++++.++++ +++++++++.++++|.+
T Consensus 118 ~Vl~~~~~y~~~~~~~-~~~g~~~~~v~~~--~~~------------~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~ 180 (369)
T 3cq5_A 118 TALGFQPSYSMHPILA-KGTHTEFIAVSRG--ADF------------RIDMDVALEEIRAK--QPDIVFVTTPNNPTGDV 180 (369)
T ss_dssp EEEEEESSCTHHHHHH-HHTTCEEEEEECC--TTS------------SCCHHHHHHHHHHH--CCSEEEEESSCTTTCCC
T ss_pred EEEEcCCChHHHHHHH-HHcCCEEEEecCC--cCC------------CCCHHHHHHHhhcc--CCCEEEEeCCCCCCCCC
Confidence 9999999998765433 3333333221111 110 01799999999842 46677777777778888
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcc-ccccC-CCcchhhhhhhcc-CCccceeeeehHHHHHHhcCC
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFG-VTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~-~~~~~-~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~ 232 (368)
.+ ++++.++|+.+++++|+||+|+++ ....... .+.++ ..+.+.|+||.++ +|+|+||+++++++++.+...
T Consensus 181 ~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~ 256 (369)
T 3cq5_A 181 TS----LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLV 256 (369)
T ss_dssp CC----HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTT
T ss_pred CC----HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHc
Confidence 87 788888888889999999999887 3222111 12334 4456779999998 899999999999888888743
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
. .+++.++++++++.++++.... +...+++.++++++.+.|++ .++. ..+..++++++.+.
T Consensus 257 ~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~-------- 318 (369)
T 3cq5_A 257 R-----LPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE----LGYA-VVPSESNFVFFGDF-------- 318 (369)
T ss_dssp S-----CTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH----HTCE-EECCSSSEEEEECC--------
T ss_pred C-----CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCE-ECCCCCeEEEEECC--------
Confidence 2 3456889999998888874211 33455566666666666655 3333 23455677777652
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCC-CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+..++.+.|.++||.+.+++ ...+|+++. +++|+++++++|++++.
T Consensus 319 -------~~~~~l~~~l~~~gi~v~~~~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 319 -------SDQHAAWQAFLDRGVLIRDVGIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp -------SSHHHHHHHHHHTTEECBCCSCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred -------CCHHHHHHHHHHCCEEEEECCCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 124678899999999999874 234566655 89999999999999875
No 80
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=2e-29 Score=230.46 Aligned_cols=325 Identities=13% Similarity=0.038 Sum_probs=209.0
Q ss_pred cCCCcHHHHHHHHHHHHcC-CCCCC-CCh-hHHHHHHHHHhhCC---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 7 LFPSYLQVLAALGETMKKG-TSFGA-PCL-LENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~-~~~~~-~~~-~~~~l~~~l~~~~~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
++ .+|++++++.+++... ..|.. ..+ ..+++++.+.+.++ +.+++++++||+++++.+++.+ ..+++.|++
T Consensus 40 ~~-~~~~v~~a~~~~~~~~~~~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l--~~~gd~vl~ 116 (390)
T 1d2f_A 40 FA-TAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW--SETGEGVVI 116 (390)
T ss_dssp SC-CCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS--SCTTCEEEE
T ss_pred CC-CCHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHh--cCCCCEEEE
Confidence 45 6789999999988653 22221 223 44444444444443 4679999999999999999866 245789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
..++|++....+.. .|..+...+.....+ .+. .|++++++++++. +++++++...++++|.+.+.
T Consensus 117 ~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~--------~~~---~d~~~l~~~l~~~--~~~~v~l~~p~nptG~~~~~- 181 (390)
T 1d2f_A 117 HTPAYDAFYKAIEG-NQRTVMPVALEKQAD--------GWF---CDMGKLEAVLAKP--ECKIMLLCSPQNPTGKVWTC- 181 (390)
T ss_dssp EESCCHHHHHHHHH-TTCEEEEEECEECSS--------SEE---CCHHHHHHHHTST--TEEEEEEESSCTTTCCCCCT-
T ss_pred cCCCcHHHHHHHHH-CCCEEEEeecccCCC--------ccc---cCHHHHHHHhccC--CCeEEEEeCCCCCCCcCcCH-
Confidence 99999986544433 333322211110000 000 1899999999742 57777665555556766554
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcccCc-cccccCCC-cc-hhhhhhhcc-CCccceeeeeh-HHHHHHhcCCCC
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVT-PD-LTTLGKIIG-GGLPVGAYGGR-RDIMEMVAPAGP 234 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~-~~~~~~~~-~d-i~s~sK~~~-~G~~iG~v~~~-~~~~~~~~~~~~ 234 (368)
+++++|+++|++||+++|+||+|+++ +.|... ....+... .| +.|+||.++ +|+|+||++++ +++++.+..
T Consensus 182 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~--- 258 (390)
T 1d2f_A 182 DELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLS--- 258 (390)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCccHhhcccChhheEEEECCHHHHHHHHH---
Confidence 55999999999999999999999887 544321 22112111 12 889999999 89999999884 777777652
Q ss_pred ccc-cccC-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-c-CCceEEeecc-ceEEEEeecCCCcc
Q 017633 235 MYQ-AGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-A-GHAICGGYIS-GMFGFFFTEGPVYN 309 (368)
Q Consensus 235 ~~~-~~t~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~~ 309 (368)
... ..++ +.++++++++.++++.. +++.++.++..+..++.+.+.+.+ . +.. ...+.+ .++|+.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~---- 331 (390)
T 1d2f_A 259 ALKGRDGLSSPSVLALTAHIAAYQQG--APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRPL---- 331 (390)
T ss_dssp HHHTTSCCCSCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGGG----
T ss_pred HHhhhcccCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEcccc----
Confidence 222 3444 77899998888888742 223444444444444444444433 3 222 223333 4456665310
Q ss_pred cchhcccccHHHHHHHHHHH-HcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 310 FEDAKKSETTKFARFYRGML-EEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|+ ++||.+.++.. ..+|+++..+++++++++++|++++.+
T Consensus 332 --------~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 332 --------NIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp --------CCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --------CCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 012467899999 58999988642 346777777899999999999998865
No 81
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=1.2e-29 Score=229.74 Aligned_cols=313 Identities=16% Similarity=0.068 Sum_probs=207.0
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+++| .+|++++++.+++.....| +.....++++.++++++ +.+++++++||++++..+++.+ +++.|++..+
T Consensus 34 ~~~~-~~~~v~~a~~~~~~~~~~y--~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~----~gd~vl~~~p 106 (364)
T 1lc5_A 34 NPLG-MPVSVKRALIDNLDCIERY--PDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL----KPRRAMIVTP 106 (364)
T ss_dssp CTTC-CCHHHHHHHHHTGGGGGSC--CCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH----CCSEEEEEES
T ss_pred CCCC-CCHHHHHHHHHHHHHhhcC--CCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc----CCCeEEEeCC
Confidence 3466 6789999999887653333 44457899999999987 6789999999999999999876 3489999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCC-HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
+|++....... .|..+...+.....++ + ++++.+.++ ++++++++...++++|.+. +.++
T Consensus 107 ~y~~~~~~~~~-~g~~~~~v~~~~~~~~--------------~~l~~~~~~~~---~~~~~v~i~~p~nptG~~~-~~~~ 167 (364)
T 1lc5_A 107 GFAEYGRALAQ-SGCEIRRWSLREADGW--------------QLTDAILEALT---PDLDCLFLCTPNNPTGLLP-ERPL 167 (364)
T ss_dssp CCTHHHHHHHH-TTCEEEEEECCGGGTT--------------CCCTTHHHHCC---TTCCEEEEESSCTTTCCCC-CHHH
T ss_pred CcHHHHHHHHH-cCCeEEEEeCCccccc--------------chhHHHHHhcc---CCCCEEEEeCCCCCCCCCC-CHHH
Confidence 99986544333 3333222111100111 1 233333332 3455555433345566554 5666
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccC-cc-ccccCCCcchhhhhhhcc-CCccceeee-ehHHHHHHhcCCCCccc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYFGVTPDLTTLGKIIG-GGLPVGAYG-GRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~-~~-~~~~~~~~di~s~sK~~~-~G~~iG~v~-~~~~~~~~~~~~~~~~~ 237 (368)
+++|+++|++||+++|+||+|+++ +.+.. .. .+..+....+.|+||.++ +|+|+||++ +++++++.+...
T Consensus 168 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~----- 242 (364)
T 1lc5_A 168 LQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQ----- 242 (364)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHH-----
T ss_pred HHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHh-----
Confidence 999999999999999999999887 43321 11 122334445679999999 899999998 899988877632
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
..+++.|+++++++.++++. .++.++.++..+..++.+.+.+.+.+.....++.+.++++.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~------------- 306 (364)
T 1lc5_A 243 QMPWSVNALAALAGEVALQD---SAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER------------- 306 (364)
T ss_dssp SCTTCSCHHHHHHHHHGGGC---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC-------------
T ss_pred CCCCCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCC-------------
Confidence 13567899999888777752 23444555555555555555554443222334556677776521
Q ss_pred cHHHHHHHHHHHHcCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...++.+.|+++||.+.++.. ..+|+++. ++++++++++.|++++++
T Consensus 307 --~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 307 --EDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp --TTCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC--
T ss_pred --cHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhhc
Confidence 124688889999999998742 23455543 688899999999988754
No 82
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=1.9e-30 Score=240.25 Aligned_cols=327 Identities=14% Similarity=0.078 Sum_probs=210.2
Q ss_pred cHHH--HHHHHHHHHc-CCCCCCCChhHHHHHHHHHhhC-----C-CCCe---EEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 11 YLQV--LAALGETMKK-GTSFGAPCLLENVLAEMVISAV-----P-SIEM---VRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 11 ~~~v--~~a~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~-----~-~~~~---v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
+|.+ ++++.+++.. ....+.+.....++++.+++++ + ++++ +++|+||++|+..+++.+ ..+++.|
T Consensus 63 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--~~~gd~V 140 (430)
T 2x5f_A 63 KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLF--VNQDDTI 140 (430)
T ss_dssp ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHH--CCTTCEE
T ss_pred chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHH--hCCCCEE
Confidence 4555 7777665543 2222223334678888888877 5 5677 999999999999999876 3467899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++..++|++....+....|..+...+....... .|++++++++++++.+++++++...+|++|.+ .
T Consensus 141 l~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~-------------~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~ 206 (430)
T 2x5f_A 141 LLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGH-------------YTTDSLVEALQSYNKDKVIMILNYPNNPTGYT-P 206 (430)
T ss_dssp EEESSCCTHHHHHHTTTTCCEEEEECCBCTTSC-------------BCSHHHHHHHHHCCSSEEEEEECSSCTTTCCC-C
T ss_pred EEcCCcCccHHHHHHHhcCCeEEEEeccCccCC-------------cCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCc-C
Confidence 999999988644333203332222111110111 17899999998643466765555445556655 5
Q ss_pred CHHHHHHHHHHHHH-----hCCEEEEehhhhch-hcccC-ccc--cc---cCC---Ccchhhhhhhcc-CCccceeeee-
Q 017633 159 KPDFLNAIRRITKE-----NGALLIFDEVMTGF-RLAYG-GAQ--EY---FGV---TPDLTTLGKIIG-GGLPVGAYGG- 221 (368)
Q Consensus 159 ~~~~l~~i~~l~~~-----~~~~li~De~~~~~-~~g~~-~~~--~~---~~~---~~di~s~sK~~~-~G~~iG~v~~- 221 (368)
+.+++++|+++|++ ||+++|+||+|+++ +.+.. ... .. .+. ...+.|+||.++ +|+|+||+++
T Consensus 207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~ 286 (430)
T 2x5f_A 207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG 286 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence 56669999999999 99999999999887 54431 121 11 222 233568999998 8999999999
Q ss_pred --hHHHHHHhcCCCC-ccccccCCCCHHHHHHHHHHHH-HHc-cCC---HHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 017633 222 --RRDIMEMVAPAGP-MYQAGTLSGNPLAMTAGIHTLK-RLK-EPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGY 293 (368)
Q Consensus 222 --~~~~~~~~~~~~~-~~~~~t~~~~~~~~~a~~~~l~-~~~-~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 293 (368)
++++++.+..... ..+..+++.++++++++.++++ ... .+. ..++++++++.+.+.|++.+...+.....+.
T Consensus 287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~ 366 (430)
T 2x5f_A 287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFN 366 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCC
T ss_pred cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCC
Confidence 8888887763110 0111567889999999888886 320 011 2333444444444444321102332222223
Q ss_pred ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHH-cCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 294 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.++|+.+. ..+..++++.|++ +||.+.+++...+|+++. .+++++++++++|++++++
T Consensus 367 ~g~~~~~~~~--------------~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 367 SGYFMAIKVH--------------DVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp BSSEEEEEES--------------SSCHHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC--------------CCCHHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 3445777763 1124688999998 899999985556777655 7999999999999999865
No 83
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=1.6e-29 Score=228.63 Aligned_cols=305 Identities=16% Similarity=0.116 Sum_probs=208.3
Q ss_pred CcHHHHHHHHHHHHcC--CCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 10 SYLQVLAALGETMKKG--TSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
.+|++++++.+++... ..++++.....+++++++++++ +.+++++++||++|+..+++.+ ..++|.|++..++|+
T Consensus 40 ~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l--~~~gd~Vl~~~p~~~ 117 (360)
T 3hdo_A 40 PSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAF--AAEGEEIGYVHPSYS 117 (360)
T ss_dssp CCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH--CCTTCEEEEESSSCT
T ss_pred CCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHH--hCCCCEEEEcCCChH
Confidence 6789999999988763 1233444456899999999987 6789999999999999999866 346789999999998
Q ss_pred CCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 017633 87 GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 166 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i 166 (368)
+........ |..+...+. .... +++++ .+.. ++++++++..++++|.+.+ ++++
T Consensus 118 ~~~~~~~~~-g~~~~~v~~--~~~~--------------~~~~l---~~~~--~~~~v~i~~p~nptG~~~~----~~~l 171 (360)
T 3hdo_A 118 YYGTLAEVQ-GARVRTFGL--TGDF--------------RIAGF---PERY--EGKVFFLTTPNAPLGPSFP----LEYI 171 (360)
T ss_dssp HHHHHHHHH-TCEEEEECB--CTTS--------------SBTTC---CSSB--CSSEEEEESSCTTTCCCCC----HHHH
T ss_pred HHHHHHHHC-CCEEEEeeC--CCCC--------------CHHHH---Hhhc--CCCEEEEeCCCCCCCCCcC----HHHH
Confidence 765443333 332222111 1111 12112 1111 2335555555667888888 8899
Q ss_pred HHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCC
Q 017633 167 RRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 167 ~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~ 244 (368)
.++|+++|+++|+||+|++| ..+.....+..+....+.|+||.++ +|+|+||+++++++++.+.... .+++.+
T Consensus 172 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-----~~~~~~ 246 (360)
T 3hdo_A 172 DELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIR-----DHYNLD 246 (360)
T ss_dssp HHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHS-----CSCCSC
T ss_pred HHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhC-----CCCCCC
Confidence 99999999999999999887 3222222233344455679999998 8999999999999988876322 346789
Q ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHH
Q 017633 245 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 324 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (368)
+++++++.++++. .++.++..++.+..++.+.+.+.+.+.. ...+.+.++++.+. ..+..++
T Consensus 247 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~l 308 (360)
T 3hdo_A 247 RLAQAACVAALRD---QAYLSECCRRIRETREWFTTELRSIGYD-VIPSQGNYLFATPP--------------DRDGKRV 308 (360)
T ss_dssp HHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCE-ECCCSSSEEEEECT--------------TCCHHHH
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHCCCE-EcCCCccEEEEECC--------------CCCHHHH
Confidence 9999998888873 2233444444444444444444444433 34556677776542 1235788
Q ss_pred HHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 325 YRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 325 ~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
.+.|.++||.+++++. ..+|+++. +++|+++++++|+++-+
T Consensus 309 ~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 309 YDGLYARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence 9999999999998753 34566655 89999999999998753
No 84
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=3.7e-29 Score=226.66 Aligned_cols=312 Identities=13% Similarity=0.080 Sum_probs=214.8
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++ .+|++++++.+++.....| +.....+++++++++++ +.+++++++||++++..+++.+ ..+++.|++..+
T Consensus 40 ~~~~-~~~~v~~a~~~~~~~~~~y--~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l--~~~gd~vl~~~~ 114 (365)
T 3get_A 40 NPFG-TPPKAIECLRQNANKAHLY--PDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSK--LNSKNAFLQAGV 114 (365)
T ss_dssp CTTC-SCHHHHHHHHHHGGGTTSC--CCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH--CCTTCEEEECSS
T ss_pred CCCC-CCHHHHHHHHHHHHhhccC--CCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHH--hCCCCEEEEeCC
Confidence 3444 6789999999988754333 33333799999999987 6789999999999999999876 346789999988
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++....+. ..|..+...+.....+ . |+++++++++ +++++++++..++++|.+.+.+ .+
T Consensus 115 ~~~~~~~~~~-~~g~~~~~v~~~~~~~-~-------------d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~-~l 175 (365)
T 3get_A 115 TFAMYEIYAK-QCGAKCYKTQSITHNL-D-------------EFKKLYETHK---DEIKLIFLCLPNNPLGECLDAS-EA 175 (365)
T ss_dssp CCTHHHHHHH-HHTCEEEECSSSSCCH-H-------------HHHHHHHHTT---TTEEEEEEESSCTTTCCCCCHH-HH
T ss_pred ChHHHHHHHH-HcCCEEEEEecCCCCC-C-------------CHHHHHHHhC---CCCCEEEEcCCCCCCCCCcCHH-HH
Confidence 8876544333 3343332221101111 1 7899999987 4678777766666677766633 36
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-h--cccC-c-cc---cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCC
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-R--LAYG-G-AQ---EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGP 234 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~--~g~~-~-~~---~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~ 234 (368)
++|+++| ++|+++|+||+|+++ . .+.. . .. +..+....+.|+||.++ +|+|+||+++++++++.+....
T Consensus 176 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~- 253 (365)
T 3get_A 176 TEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLR- 253 (365)
T ss_dssp HHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHS-
T ss_pred HHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhc-
Confidence 6777766 579999999999877 3 3321 1 11 12233345668999998 8999999999999888876322
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhc
Q 017633 235 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 235 ~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.+++.++++++++.++++. .++.++.+++.+..++.+.+.+.+.+.. ..++.+.++|+.+..
T Consensus 254 ----~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~~~~~~~~~~---------- 315 (365)
T 3get_A 254 ----APFNVSNLALKAAVAAMDD---DEFTEKTLENNFSQMELYKEFAKKHNIK-IIDSYTNFITYFFDE---------- 315 (365)
T ss_dssp ----CTTCSCHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHHHTTCE-ECCCSSSEEEEECSS----------
T ss_pred ----CCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCE-ECCCCCeEEEEECCC----------
Confidence 3456889999998888762 2334444444444444444444444433 345556777776531
Q ss_pred ccccHHHHHHHHHHHHcCeeecCCC---CCccccccCCCHHHHHHHHHHHHHHH
Q 017633 315 KSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
. +..++.+.|.++||.+.++. ...+|+++. +++|+++++++|++++
T Consensus 316 ---~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 316 ---K-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ---S-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred ---C-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 1 35789999999999999886 345666655 8999999999999886
No 85
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.97 E-value=4.6e-29 Score=230.56 Aligned_cols=298 Identities=13% Similarity=0.139 Sum_probs=197.2
Q ss_pred hhHHHHHHHHHhhCC-C---------CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccc
Q 017633 33 LLENVLAEMVISAVP-S---------IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 102 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~---------~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 102 (368)
++..++++++.+.++ . .+++++|+|+++++..+++.+ ..+++.|++..++|++....+ ...|..+..
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~ 158 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI--INPGDNVLLDEPAYSGTLQSL-HPLGCNIIN 158 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH--CCTTCEEEEESSCCHHHHHHH-GGGTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh--CCCCCEEEEeCCCcHHHHHHH-HHcCCEEEE
Confidence 445555555555444 2 269999999999999999876 346789999999998864433 333333221
Q ss_pred cCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---------CCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHH
Q 017633 103 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---------GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKE 172 (368)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---------~~~~~~~~~~~~~~-~g~~~~~~~~l~~i~~l~~~ 172 (368)
..... .++ |+++|++++++.+ +++++++++|+.+| +|.+ .+.+++++|+++|++
T Consensus 159 v~~~~-~~~--------------d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 159 VASDE-SGI--------------VPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNS-LTSERKKEIYELARK 222 (425)
T ss_dssp ECEET-TEE--------------CHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHH
T ss_pred eCcCC-CCC--------------CHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHH
Confidence 11110 111 7999999997421 35778877665544 5554 556669999999999
Q ss_pred hCCEEEEehhhhch-hcccC-cc---ccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCHHH
Q 017633 173 NGALLIFDEVMTGF-RLAYG-GA---QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 247 (368)
Q Consensus 173 ~~~~li~De~~~~~-~~g~~-~~---~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 247 (368)
||+++|+||+|+++ +.+.. .. .+..+....+.||||.+++|+|+||+++++++++.+.. .....+++.++++
T Consensus 223 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~---~~~~~~~~~~~~~ 299 (425)
T 2r2n_A 223 YDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVIL---HIQVSTLHPSTFN 299 (425)
T ss_dssp TTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHH---HHHTTTCSSCHHH
T ss_pred cCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHH---HHHHhcCCCCHHH
Confidence 99999999999987 54431 12 22223345567999999999999999999998887762 3344567889999
Q ss_pred HHHHHHHHHHHccC---CH----HHHHHHHHHHHHHHHHHHHHhcCCc-eEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 248 MTAGIHTLKRLKEP---GT----YEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 248 ~~a~~~~l~~~~~~---~~----~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
+.++.++++.+.++ ++ .++++++++.+.+.|++.+ .+.. ...+..+.++|+.+... .
T Consensus 300 q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~p~~g~~~~~~~~~~-------------~ 364 (425)
T 2r2n_A 300 QLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWL--TGLAEWHVPAAGMFLWIKVKGI-------------N 364 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--SSSEEECCCSBSSEEEEEETTC-------------S
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCeEEeCCCceEEEEEEeCCC-------------C
Confidence 99988888753221 22 2333344444444444321 0221 12345567788877321 1
Q ss_pred HHHH-HHHHHHHcCeeecCCCC---------CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 320 KFAR-FYRGMLEEGVYFAPSQF---------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 320 ~~~~-~~~~l~~~Gi~~~~~~~---------~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
+..+ +.+.|.++||.+.++.. ..+|+++. .+++++++++++|++++++
T Consensus 365 ~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 365 DVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 1234 57788899999988632 34566655 7999999999999998865
No 86
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.97 E-value=8.9e-30 Score=234.03 Aligned_cols=323 Identities=14% Similarity=0.049 Sum_probs=208.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.+++.+....+.+.....++++.+++++ + +.+++++++||++|+..+++.+ ..+++.|++..
T Consensus 55 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l--~~~gd~Vl~~~ 132 (406)
T 1xi9_A 55 PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGAL--LDPGDEILVPG 132 (406)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHh--CCCCCEEEEcC
Confidence 4688999999988764322222223455566655554 2 4689999999999999999876 34678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++....+ ...|..+...+.....++ . -|+++|++.++ ++++++++++.++++|.++ +.++
T Consensus 133 ~~~~~~~~~~-~~~g~~~~~v~~~~~~~~---------~---~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~-~~~~ 195 (406)
T 1xi9_A 133 PSYPPYTGLV-KFYGGKPVEYRTIEEEDW---------Q---PDIDDIRKKIT---DRTKAIAVINPNNPTGALY-DKKT 195 (406)
T ss_dssp SCCHHHHHHH-HHTTCEEEEEEEEGGGTS---------E---ECHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHH
T ss_pred CCCccHHHHH-HHcCCEEEEeecCCCcCC---------c---CCHHHHHHhhC---cCceEEEEECCCCCCCCCc-CHHH
Confidence 9998754433 233332221111100010 0 17999999987 3677777776666677655 4556
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccC--C-Ccchhhhhhhcc-CCccceeee--ehH----HHHHHhcC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG--V-TPDLTTLGKIIG-GGLPVGAYG--GRR----DIMEMVAP 231 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~--~-~~di~s~sK~~~-~G~~iG~v~--~~~----~~~~~~~~ 231 (368)
+++|+++|++||+++|+||+|+++ +.+.......++ . ...+.|+||.++ +|+|+||++ +++ ++++.+..
T Consensus 196 l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~ 275 (406)
T 1xi9_A 196 LEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDR 275 (406)
T ss_dssp HHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHH
Confidence 999999999999999999999887 533223333332 1 222348999998 799999998 888 88887763
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCccc
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
..... ++.+++++.++.++++.. .++.+++.++.+..++.+.+.+.+. ++....+..+.++|+.+...
T Consensus 276 ---~~~~~-~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----- 344 (406)
T 1xi9_A 276 ---LARIR-LCPNTPAQFAAIAGLTGP--MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVG----- 344 (406)
T ss_dssp ---HHHHT-CCSCSHHHHHHHHHHHSC--CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSC-----
T ss_pred ---HHHhh-cCCCHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCcc-----
Confidence 11222 577888888888888632 2223344444444444444444333 22111122244445454210
Q ss_pred chhcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 311 EDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|+++++++
T Consensus 345 ------~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 345 ------PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp ------SCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred ------CCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 0123467888887 8899998864 23467766799999999999999998653
No 87
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.97 E-value=2.4e-29 Score=233.26 Aligned_cols=308 Identities=11% Similarity=0.061 Sum_probs=194.8
Q ss_pred hhHHHHHHHHHhhCC---------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCcccc
Q 017633 33 LLENVLAEMVISAVP---------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 103 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~---------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 103 (368)
....+|++.++++++ +.+++++++||++|++.+++.+ ..+++.|++..++|++.........|.++...
T Consensus 86 ~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~ 163 (435)
T 3piu_A 86 HGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCL--ADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI 163 (435)
T ss_dssp TCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE
T ss_pred CCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHh--cCCCCeEEECCCccccHHHHHHHhcCCEEEEe
Confidence 334566666666653 3789999999999999999877 34678899999888765433322334333221
Q ss_pred CCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 104 GLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
......++. .|+++|++++++. ..+++++++++.++++|.+.+ .+.+++|+++|++||++||+|
T Consensus 164 ~~~~~~~~~------------~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~li~D 230 (435)
T 3piu_A 164 HCTSSNGFQ------------ITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMT-RNELYLLLSFVEDKGIHLISD 230 (435)
T ss_dssp ECCGGGTSC------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHHTCEEEEE
T ss_pred eCCCccCCc------------CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHHcCCEEEEe
Confidence 111111100 1899999999751 236777777666666776555 445999999999999999999
Q ss_pred hhhhch-hcccCc-cccccC----CC-----cc----hhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCC
Q 017633 181 EVMTGF-RLAYGG-AQEYFG----VT-----PD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSG 243 (368)
Q Consensus 181 e~~~~~-~~g~~~-~~~~~~----~~-----~d----i~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~ 243 (368)
|+|+++ +.+..+ ...... .+ +| +.|+||+++ +|+|+||+++ ++.+.+.+.. ...++..
T Consensus 231 ea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-----~~~~~~~ 305 (435)
T 3piu_A 231 EIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-----MSSFGLV 305 (435)
T ss_dssp CTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHH-----HGGGSCC
T ss_pred ccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHH-----HhhcCCC
Confidence 999886 444322 111111 11 23 568999999 8999999988 5667666652 2234456
Q ss_pred CHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHH
Q 017633 244 NPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 244 ~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
++++++++.+.++...- +++.++.+++.+..++.+.+.+.+.++....+..+.++|+.+..... ........
T Consensus 306 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~-------~~~~~~~~ 378 (435)
T 3piu_A 306 SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLR-------SNTFEAEM 378 (435)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSS-------SSSHHHHH
T ss_pred CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccc-------cCCchhHH
Confidence 78888887776652210 11222333333333444444444445433333444788887743110 01112456
Q ss_pred HHHHHHHHc-CeeecCCCC------CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 323 RFYRGMLEE-GVYFAPSQF------EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 323 ~~~~~l~~~-Gi~~~~~~~------~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
++.+.|+++ ||.+.++.. ..+|+++.. +++++++++++|++++++
T Consensus 379 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 379 ELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp HHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 888999887 999998642 335665555 999999999999999864
No 88
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.97 E-value=1.1e-28 Score=227.05 Aligned_cols=313 Identities=15% Similarity=0.071 Sum_probs=218.3
Q ss_pred ceeccCC-CcHHHHHHHHHHHHcCC-C------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFP-SYLQVLAALGETMKKGT-S------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~-~~~~v~~a~~~~~~~~~-~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.+++|+ .+|++++++.+++.+.. . .....+...+++++++++++.. ..+++++|++++..+++.+ ..+
T Consensus 66 s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGt~a~~~~l~~~--~~~ 142 (409)
T 3kki_A 66 SNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFD-ECLLSQSGWNANVGLLQTI--CQP 142 (409)
T ss_dssp CSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHH--CCT
T ss_pred ccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCC-eEEEecchHHHHHHHHHHh--cCC
Confidence 3456666 68999999999998721 1 1123356778999999988643 4566678999999998766 346
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+|.|++..+.| +.....+...+.. ++.++..|+++++++++++ ++++++++++++++|
T Consensus 143 gd~Vl~~~~~~-~~~~~~~~~~g~~-------------------~~~~~~~d~~~le~~l~~~--~~~~vi~~~~~nptG 200 (409)
T 3kki_A 143 NTNVYIDFFAH-MSLWEGARYANAQ-------------------AHPFMHNNCDHLRMLIQRH--GPGIIVVDSIYSTLG 200 (409)
T ss_dssp TCEEEEETTSC-HHHHHHHHHTTCE-------------------EEEECTTCHHHHHHHHHHH--CSCEEEEESBCTTTC
T ss_pred CCEEEECCCcC-HHHHHHHHHcCCe-------------------EEEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCC
Confidence 67777766554 4334444443332 2233334899999999853 468999999999899
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhc--h-hcccCccccccCC--Ccch--hhhhhhccCCccceeeeehHHHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTG--F-RLAYGGAQEYFGV--TPDL--TTLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~--~-~~g~~~~~~~~~~--~~di--~s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
.+.+ +++|+++|++||++||+||+|++ + +.|..+ ...++. .+|+ .|+||++++| .||+++++++++
T Consensus 201 ~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~~~~~ 273 (409)
T 3kki_A 201 TIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGAGL-LAELGLTREVHFMTASLAKTFAYR--AGAIWCNNEVNR 273 (409)
T ss_dssp CBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCSS--CEEEEESSSGGG
T ss_pred CcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCcc-hhhcCCCCCCCEEEeecchhhCCC--ceEEEECHHHHH
Confidence 8888 99999999999999999999976 4 334332 234444 3455 6899999965 589999888777
Q ss_pred HhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC
Q 017633 228 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 306 (368)
Q Consensus 228 ~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (368)
.+........ .+.+.++++++++.++++.+.+ +.+.++++++++++++.|+++ ++. +.+.+.++++.+.
T Consensus 274 ~~~~~~~~~~-~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~--~~~~~~~~~~~~~--- 343 (409)
T 3kki_A 274 CVPFISYPAI-FSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL----GLT--IRSESQIIGLETG--- 343 (409)
T ss_dssp THHHHCHHHH-HSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT----TCC--CCCSSSEEEEEEE---
T ss_pred HHHHhCcCcc-ccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCc--cCCCCCEEEEEeC---
Confidence 6653221111 2234688888899899987754 345666777777777777654 332 2246777787763
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCC-------CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++++.|+++||.+.+.. ...+|+ +..++++++++++++|++++++
T Consensus 344 ----------~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 344 ----------DERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp ----------SHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 33446789999999999996542 223454 4457999999999999999864
No 89
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.97 E-value=2.9e-29 Score=233.64 Aligned_cols=322 Identities=12% Similarity=0.078 Sum_probs=206.9
Q ss_pred CcHHHHHHHHHHHHc-----CCCCCCCChhHHHHHHHHHhhC----C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 10 SYLQVLAALGETMKK-----GTSFGAPCLLENVLAEMVISAV----P-SIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~----~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+|+|++++.+++.+ ....+.+.....+|++.+++++ + ..+++++++|+++++..+ ... ..++|.|+
T Consensus 83 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l--~~~gd~Vl 159 (449)
T 3qgu_A 83 LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMM--FGSKPTVA 159 (449)
T ss_dssp CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHH--HCSSSCEE
T ss_pred CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHH--hCCCCEEE
Confidence 577999999998874 2222234455778888888886 4 678999999999999988 333 25678999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|++........+..+.... . ...+++.++.++-+.+...+.+. +++++++++..+|++|.+. +
T Consensus 160 ~~~p~~~~~~~~~~~~g~~g~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~p~NPtG~~~-~ 227 (449)
T 3qgu_A 160 VQDPSYPVYVDTSVMMGMTGDHNG-T---------GFDGIEYMVCNPDNHFFPDLSKA-KRTDIIFFCSPNNPTGAAA-T 227 (449)
T ss_dssp EEESCCTHHHHHHHHHTCSCCBCS-S---------SBTTEEEEECCGGGTTCCCGGGC-CCCSEEEEESSCTTTCCCC-C
T ss_pred EcCCCChhHHHHHHHcCCcccccc-c---------ccceeEEEecccccCCcCChhHc-CCCCEEEEeCCCCCCCCcC-C
Confidence 999999887655544443311000 0 00011222221110110011111 3556666655555566655 5
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hccc-Ccccccc----CCCcchhhhhhhcc-CCccceeeeehHHHHH-----
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDIME----- 227 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~----- 227 (368)
.+++++|+++|++||+++|+||+|+++ +.+. ......+ +..+.+.|+||+++ +|+|+||+++++++++
T Consensus 228 ~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~ 307 (449)
T 3qgu_A 228 RAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEP 307 (449)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCB
T ss_pred HHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhh
Confidence 555999999999999999999999988 5442 2222222 23345679999999 8999999999877654
Q ss_pred ---HhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 228 ---MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 228 ---~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
.+. ......+++++++++.++.++++.... +++.+++.++++++++.|++ .++....+..+.++|+.
T Consensus 308 ~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 380 (449)
T 3qgu_A 308 VHADWN---RVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE----MGFSVYGGDDAPYIWVG 380 (449)
T ss_dssp HHHHHH---HHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCEEESSSSSEEEEE
T ss_pred HHHHHH---HHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeeeCCCCeeEEEEE
Confidence 222 112234447789999988888764211 23445555555555555554 35443434456777777
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+. ..+..++++.|+++ ||.+.++.. ..+|+++..+++++++++++|++++.+
T Consensus 381 ~~--------------~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 381 FP--------------GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp CT--------------TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CC--------------CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 62 11246788888876 999998642 346777778999999999999998853
No 90
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.97 E-value=2.5e-28 Score=223.98 Aligned_cols=318 Identities=19% Similarity=0.225 Sum_probs=222.9
Q ss_pred ceeccCC-CcHHHHHHHHHHHHc-CCCCC---C---CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcC
Q 017633 3 QLIILFP-SYLQVLAALGETMKK-GTSFG---A---PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 3 ~~~~~g~-~~~~v~~a~~~~~~~-~~~~~---~---~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
+.+++|+ .+|++++++.+++.. ...++ + ..+...++++.++++++-. +.+++++|++++..+++.+ ..+
T Consensus 52 ~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~~~~~~~~--~~~ 128 (401)
T 1fc4_A 52 ANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSCFDANGGLFETL--LGA 128 (401)
T ss_dssp CSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCHHHHHHTTHHHH--CCT
T ss_pred ccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCChHHHHHHHHHHH--cCC
Confidence 3467886 799999999998876 22111 1 2567899999999999733 4556668999999988766 345
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCC---CeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG---EIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~---~~~~~~~~~~~~ 151 (368)
++.|++..+. |+.....+...|. +++.++..|++++++.+++..+ +++++++++.++
T Consensus 129 gd~v~~~~~~-~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 188 (401)
T 1fc4_A 129 EDAIISDALN-HASIIDGVRLCKA-------------------KRYRYANNDMQELEARLKEAREAGARHVLIATDGVFS 188 (401)
T ss_dssp TCEEEEETTC-CHHHHHHHHTSCS-------------------EEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEET
T ss_pred CCEEEEcchh-HHHHHHHHHHcCC-------------------ceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcC
Confidence 6667666554 4433333332222 2333444589999999975212 578888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch-h-cccCccccccCCC--cchh--hhhhhccCCccceeeeehHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGVT--PDLT--TLGKIIGGGLPVGAYGGRRD 224 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~-~-~g~~~~~~~~~~~--~di~--s~sK~~~~G~~iG~v~~~~~ 224 (368)
++|.+.+ +++|.++|++||+++|+||+|+ ++ . .+..+ ...+++. .|++ |+||.++++. .||++++++
T Consensus 189 ptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~-gG~~~~~~~ 262 (401)
T 1fc4_A 189 MDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS-GGYTAARKE 262 (401)
T ss_dssp TTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS-CEEEEECHH
T ss_pred CCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC-CEEEEcCHH
Confidence 8898888 9999999999999999999994 77 3 33321 2223332 3554 8999996554 499999999
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEee
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 303 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (368)
+++.+...... ...+++.++++++++.++++.+.. +++.++++++++++++.|++. +... .+..++++++.+.
T Consensus 263 ~~~~l~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~~~~~~~~~ 336 (401)
T 1fc4_A 263 VVEWLRQRSRP-YLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA----GFTL-AGADHAIIPVMLG 336 (401)
T ss_dssp HHHHHHHHCHH-HHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT----TCCB-CCSSSSEEEEEEE
T ss_pred HHHHHHHhCcC-ceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCcc-cCCCCCEEEEEcC
Confidence 88877632211 223557899999999999987753 346677777777777777764 3322 2456778888762
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-------ccccc--cCCCHHHHHHHHHHHHHHHhhC
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-------AGFTS--LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-------~~~~~--~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
+..+..++.+.|.++||.+.++..+ .+|++ ..++++++++++++|+++++++
T Consensus 337 -------------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 337 -------------DAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp -------------CHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -------------ChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2345678999999999999986432 34554 3479999999999999998753
No 91
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.96 E-value=1e-28 Score=228.47 Aligned_cols=302 Identities=13% Similarity=0.074 Sum_probs=194.2
Q ss_pred HHHHHHHHHhhCC---------CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCC
Q 017633 35 ENVLAEMVISAVP---------SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 105 (368)
Q Consensus 35 ~~~l~~~l~~~~~---------~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (368)
..++++.++++++ +.+++++++|++++++.+++.+. .+++.|++..++|++.........|..+...+.
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~--~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~ 162 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA--DPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHC 162 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC--CTTCEEEEESSCCTTHHHHTTTTTCCEEEEECC
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC--CCCCeEEEccCCCcchHHHHHHhcCCEEEEeec
Confidence 4566666666542 36789999999999999998763 457899999999988543333233433322211
Q ss_pred CCCCCCCCCCCCcccccCCCCHHHHHHHHHc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehh
Q 017633 106 PDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 182 (368)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~ 182 (368)
....++. .|++++++++++ ..++++++++.+.++++|.+. +.+++++|+++|++||++||+||+
T Consensus 163 ~~~~~~~------------~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea 229 (428)
T 1iay_A 163 ESSNNFK------------ITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTL-DKDTLKSVLSFTNQHNIHLVCDEI 229 (428)
T ss_dssp CTTTTTC------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECT
T ss_pred CCccCCc------------CCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHCCeEEEEecc
Confidence 1111110 179999999874 223577666555455566654 667799999999999999999999
Q ss_pred hhch-hcccCc-ccccc-------CCCcc----hhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHHH
Q 017633 183 MTGF-RLAYGG-AQEYF-------GVTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLA 247 (368)
Q Consensus 183 ~~~~-~~g~~~-~~~~~-------~~~~d----i~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~ 247 (368)
|.++ +.+..+ ....+ +..+| +.|+||.++ +|+|+||+++ ++++++.+.. ...+++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 304 (428)
T 1iay_A 230 YAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARK-----MSSFGLVSTQT 304 (428)
T ss_dssp TGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHH-----HHTTSCCCHHH
T ss_pred ccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHH-----HHhcccCCHHH
Confidence 9887 443221 21111 11245 568999998 8999999988 6778877762 12335678888
Q ss_pred HHHHHHHHHHHc---c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHH
Q 017633 248 MTAGIHTLKRLK---E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 248 ~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
+.++.++++... + +++.+++.++++++.+.|++ .+.....+..+.++|+.+..... .+......
T Consensus 305 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~ 373 (428)
T 1iay_A 305 QYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV----VGIKCLKNNAGLFCWMDLRPLLR-------ESTFDSEM 373 (428)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBCCCSSSSEEEEECGGGCS-------SSSHHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCcccCCCeeEEEEEechhhcC-------CCchhHHH
Confidence 888777765221 0 12333444444555444444 34332222256677887632100 00112456
Q ss_pred HHHHHHHHc-CeeecCCCC------CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 323 RFYRGMLEE-GVYFAPSQF------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 323 ~~~~~l~~~-Gi~~~~~~~------~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
++++.|+++ ||.+.++.. ..+|+++. .+++++++++++|++++++
T Consensus 374 ~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 374 SLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 789999987 999998642 24566555 7999999999999999865
No 92
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.96 E-value=1.4e-28 Score=228.00 Aligned_cols=323 Identities=11% Similarity=0.067 Sum_probs=200.8
Q ss_pred CCcHHHHHHHHHHHHcCC----CC-CCCChhHHHHHHHHHhhC----C-CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 9 PSYLQVLAALGETMKKGT----SF-GAPCLLENVLAEMVISAV----P-SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~----~~-~~~~~~~~~l~~~l~~~~----~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
..+|.|++++.+++.+.. .+ +.+.....+|++.+++++ + ..+++++++|+++++..+..++ .++|.|
T Consensus 69 ~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l~~l~---~~gd~V 145 (432)
T 3ei9_A 69 PIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMF---GSNVTI 145 (432)
T ss_dssp CCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHHH---CTTCCE
T ss_pred CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHHHHHc---CCCCEE
Confidence 467899999999887521 12 223455677888888874 4 6789999999999998743333 578899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++..++|++...........+....... ...+++.++.++-..+...+.+. +++++++++..+|++|.+.+
T Consensus 146 l~~~p~y~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~-~~~~~v~l~~p~NPtG~~~~ 216 (432)
T 3ei9_A 146 AVQDPSYPAYVDSSVIMGQTGQFNTDVQ--------KYGNIEYMRCTPENGFFPDLSTV-GRTDIIFFCSPNNPTGAAAT 216 (432)
T ss_dssp EEEESCCTHHHHHHHHHTCSCCEETTTT--------EETTCEEEECCGGGTTSCCGGGC-CCCSEEEEESSCTTTCCCCC
T ss_pred EEeCCCCHHHHHHHHHcCCccccccccc--------ccCceEEeccCcccCCcCChhhC-CCCCEEEEeCCCCCCCCCCC
Confidence 9999999887555444433221100000 00011112211000000001111 34555555555555666554
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCcccccc----CCCcchhhhhhhcc-CCccceeeeehHHH-------
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGAYGGRRDI------- 225 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~----~~~~di~s~sK~~~-~G~~iG~v~~~~~~------- 225 (368)
.+++++|+++|++||++||+||+|.++ ..+.......+ +....+.|+||+++ +|+|+||+++++++
T Consensus 217 -~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~ 295 (432)
T 3ei9_A 217 -REQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFP 295 (432)
T ss_dssp -HHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCB
T ss_pred -HHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHH
Confidence 455999999999999999999999988 44332222222 22344679999999 89999999988776
Q ss_pred -HHHhcCCCCccccccCCCCHHHHHHHHHHHHHH-cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE
Q 017633 226 -MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 301 (368)
Q Consensus 226 -~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~-~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (368)
.+.+.. .....+++++++++.++.+++... .+ +++.++++++++++++.|++ .++....+..+.++|+.
T Consensus 296 ~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 368 (432)
T 3ei9_A 296 VAKDFNR---IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS----LGYDVYGGKNAPYVWVH 368 (432)
T ss_dssp HHHHHHH---HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCEEECSSSSEEEEE
T ss_pred HHHHHHH---HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH----CCceecCCCcceEEEEE
Confidence 555542 222334467888888888776421 11 23344555555555555554 34433333456677877
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC------CCccccccCCCHHHHHHHHHHHHHHH
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
+. ..+..+++..|+++ ||.+.++. ...+|+++..+++++++++++|++--
T Consensus 369 ~~--------------~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 369 FP--------------NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425 (432)
T ss_dssp CT--------------TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CC--------------CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 63 11246778887765 99998863 23467788889999999999998753
No 93
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.96 E-value=6.6e-28 Score=221.00 Aligned_cols=314 Identities=19% Similarity=0.194 Sum_probs=219.4
Q ss_pred ccCC-CcHHHHHHHHHHHHcCC-CC------CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 6 ILFP-SYLQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 6 ~~g~-~~~~v~~a~~~~~~~~~-~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
++|+ .+|++++++.+++.... .+ ....+...++++++++.++ .+++++++||++|+..+++.+ ..+++.
T Consensus 53 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~v~~~~ggt~a~~~~~~~~--~~~gd~ 129 (398)
T 3a2b_A 53 YLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG-KEAAILFSTGFQSNLGPLSCL--MGRNDY 129 (398)
T ss_dssp TTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHS--SCTTCE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHH--hCCCCE
Confidence 4566 78899999999886532 11 1235778899999999875 368999999999999999876 345677
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCC-CeEEEEEcccCCCCCcc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG-EIAAIILEPVVGNSGFI 156 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~-~~~~~~~~~~~~~~g~~ 156 (368)
|++..+.|... ...+...|.. ++.++..|++++++.+++..+ +++++++++.++++|.+
T Consensus 130 V~~~~p~~~~~-~~~~~~~g~~-------------------~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~ 189 (398)
T 3a2b_A 130 ILLDERDHASI-IDGSRLSFSK-------------------VIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDI 189 (398)
T ss_dssp EEEETTCCHHH-HHHHHHSSSE-------------------EEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCB
T ss_pred EEECCccCHHH-HHHHHHcCCc-------------------eEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCc
Confidence 87777665543 3444443332 233333489999999986432 67888888888888988
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc-cCccccccCCC--cchh--hhhhhccC-CccceeeeehHHHHHHh
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFGVT--PDLT--TLGKIIGG-GLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g-~~~~~~~~~~~--~di~--s~sK~~~~-G~~iG~v~~~~~~~~~~ 229 (368)
.+ +++|+++|++||+++|+||+|+.+ ... .....+.++.. +|++ |+||.+++ | ||+++++++++.+
T Consensus 190 ~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l 262 (398)
T 3a2b_A 190 VN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFL 262 (398)
T ss_dssp CC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHH
T ss_pred cC----HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHH
Confidence 87 999999999999999999999654 211 11122334432 4555 89999983 5 9999999888877
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCc
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 308 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
.... .....+.+.++..++++.++++.+.. +++.++++++++++.+.|++. +... ..+.++++|+.+.
T Consensus 263 ~~~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~g~~~~~~~~----- 331 (398)
T 3a2b_A 263 KHNA-RSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH----GFDL-GATESPILPIFIR----- 331 (398)
T ss_dssp HHHC-HHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT----TCCB-CSCCSSEEEEECC-----
T ss_pred HHhc-ccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc----CCCc-CCCCCCEEEEEcC-----
Confidence 6311 11223334566665566677776533 456777788888888887764 3222 2334677777752
Q ss_pred ccchhcccccHHHHHHHHHHHHcCeeecCCCC-------CccccccC--CCHHHHHHHHHHHHHHHhhC
Q 017633 309 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTSLA--HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~~~~~--~~~~~i~~~~~~l~~~l~~~ 368 (368)
...+..++.+.|+++||.+.++.. ..+|+++. ++++++++++++|++++.++
T Consensus 332 --------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 332 --------SNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp --------CHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred --------CHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 234567899999999999998743 23565544 59999999999999998653
No 94
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.96 E-value=1.5e-29 Score=233.34 Aligned_cols=330 Identities=11% Similarity=0.015 Sum_probs=207.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhCC-------------CCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAVP-------------SIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-------------~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
.+|++++++.+++......++ +.....++++.++++++ +.+++++++||++|+..+++.+ ..++
T Consensus 51 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l--~~~g 128 (416)
T 1bw0_A 51 TSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAI--CDAG 128 (416)
T ss_dssp CCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHH--CCTT
T ss_pred CCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHh--CCCC
Confidence 568899999998876432222 23345566666666554 4689999999999999999876 3467
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+.|++..++|++.... +...|..+.........+. . .|++++++.++. +++++++...++++|.
T Consensus 129 d~vl~~~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~---------~---~d~~~l~~~l~~---~~~~v~i~~p~nptG~ 192 (416)
T 1bw0_A 129 DYALVPQPGFPHYETV-CKAYGIGMHFYNCRPENDW---------E---ADLDEIRRLKDD---KTKLLIVTNPSNPCGS 192 (416)
T ss_dssp CEEEEEESCCTHHHHH-HHHTTCEEEEEEEEGGGTT---------E---ECHHHHHHHCCT---TEEEEEEESSCTTTCC
T ss_pred CEEEEcCCCcHhHHHH-HHHcCcEEEEeecCcccCC---------C---CCHHHHHHHhcc---CCeEEEEeCCCCCCCc
Confidence 8999999999886543 3333333221111000000 0 179999998873 4555544444555666
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc-----CccccccCC---Ccchhhhhhhcc-CCccceeeeehHH-
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-----GGAQEYFGV---TPDLTTLGKIIG-GGLPVGAYGGRRD- 224 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-----~~~~~~~~~---~~di~s~sK~~~-~G~~iG~v~~~~~- 224 (368)
+. +.+++++|+++|++||++||+||+|.++ +.+. ......+.. ...+.|+||.++ +|+|+||++++++
T Consensus 193 ~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~ 271 (416)
T 1bw0_A 193 NF-SRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH 271 (416)
T ss_dssp CC-CHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred cc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence 54 5667999999999999999999999887 5443 112222221 123458999997 7899999988653
Q ss_pred -HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEe
Q 017633 225 -IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFF 302 (368)
Q Consensus 225 -~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 302 (368)
+++.+..........+++.|+++++++.++++... +++.++..++.+..++.+.+.+.+. +.....+..+.++|+.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 350 (416)
T 1bw0_A 272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP-QEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI 350 (416)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEE
T ss_pred hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeC
Confidence 33222200001112456789999999888887322 2233444444444555555554444 22212233466777766
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..... +...+..++++.|+ ++||.+.++.. ..+|+++..+++++++++++|++++++
T Consensus 351 ~~~~~--------~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 351 DLEKY--------RDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp CGGGB--------SSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHc--------CCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 32100 01123467888885 78999998742 346777778999999999999998864
No 95
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.96 E-value=5.4e-29 Score=229.28 Aligned_cols=318 Identities=14% Similarity=0.057 Sum_probs=201.5
Q ss_pred cHHHHHHHHHHHHc-CCCC-CCCChhHHHHHHHHHhhC-C------CCCeEEE--eCChHHHHHHHHHHHHHhcCC----
Q 017633 11 YLQVLAALGETMKK-GTSF-GAPCLLENVLAEMVISAV-P------SIEMVRF--VNSGTEACMGVLRLARAFTGR---- 75 (368)
Q Consensus 11 ~~~v~~a~~~~~~~-~~~~-~~~~~~~~~l~~~l~~~~-~------~~~~v~~--~~~gt~a~~~al~~~~~~~~~---- 75 (368)
+|.+++++.+.+.. ...+ +.+.....++++.+++++ + ..+++++ |+||++|++.+++++....++
T Consensus 50 ~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~ 129 (412)
T 1ajs_A 50 LPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNK 129 (412)
T ss_dssp CHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCC
T ss_pred cHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCC
Confidence 37899999887732 1222 235556678888888877 3 3589999 999999999998655444566
Q ss_pred -ceEEEEcCCCCCCchhhhhhcCCC-ccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 76 -ERIIKFEGCYHGHADPFLVKAGSG-VATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 76 -~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
+.|++..++|++....... .|.. +...... ...... |++++++.++++.++++++++...+++
T Consensus 130 ~d~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~v~~~~p~np 195 (412)
T 1ajs_A 130 DTPVYVSSPTWENHNGVFTT-AGFKDIRSYRYWDTEKRGL-------------DLQGFLSDLENAPEFSIFVLHACAHNP 195 (412)
T ss_dssp CSCEEEEESCCTHHHHHHHH-TTCSCEEEEECEETTTTEE-------------CHHHHHHHHHHSCTTCEEEEESSSCTT
T ss_pred CCeEEEcCCCcHHHHHHHHH-cCCceeEEEeeecCCCCcc-------------CHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 8999999999986544333 3333 2221110 001101 799999999864345666655555555
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc---cCccccccCCCcc----hhhhhhhccC-Cccceeeee--
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA---YGGAQEYFGVTPD----LTTLGKIIGG-GLPVGAYGG-- 221 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g---~~~~~~~~~~~~d----i~s~sK~~~~-G~~iG~v~~-- 221 (368)
+|. ..+.+++++|+++|++||++||+||+|.++ +.+ .......+...+| +.|+||.+++ |+|+||+++
T Consensus 196 tG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~ 274 (412)
T 1ajs_A 196 TGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVA 274 (412)
T ss_dssp TCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred CCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEec
Confidence 565 455666999999999999999999999988 543 2222322211122 5689999995 999999988
Q ss_pred -hHHH----HHHhcCCCCccccccCC-CCHHHHHHHHHHHHHHc------c--CCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 222 -RRDI----MEMVAPAGPMYQAGTLS-GNPLAMTAGIHTLKRLK------E--PGTYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 222 -~~~~----~~~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~------~--~~~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
++++ ++.+.. ....+++ ++++++.++.++++... + +.+.++++++++++.+.|++.....+.
T Consensus 275 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 350 (412)
T 1ajs_A 275 KEPDSILRVLSQMQK----IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTW 350 (412)
T ss_dssp SSHHHHHHHHHHHHH----HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred CCHHHHHHHHHHHHH----HHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCe
Confidence 7764 333331 1223444 58888988888886431 1 233445555555555555543100012
Q ss_pred ceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHh
Q 017633 288 AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~ 366 (368)
....+..+.+.|..+ + ...+...+.++||.+.++ +|+++. .+++++++++++|+++++
T Consensus 351 ~~~~~~~~~~~~~~~--------------~---~~~~~~~l~~~gv~v~~~----~Ris~~~~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 351 NHITDQIGMFSFTGL--------------N---PKQVEYLINQKHIYLLPS----GRINMCGLTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp HHHHHCCSSEEECCC--------------C---HHHHHHHHHTTCEECCTT----SEEEGGGCCTTTHHHHHHHHHHHHH
T ss_pred eEEcCCCceEEEeCC--------------C---HHHHHHHHHhCCEEecCC----cEEEeeeCCHHHHHHHHHHHHHHHH
Confidence 222223344444322 1 234445566789999985 355544 489999999999999987
Q ss_pred hC
Q 017633 367 QI 368 (368)
Q Consensus 367 ~~ 368 (368)
++
T Consensus 410 ~~ 411 (412)
T 1ajs_A 410 KI 411 (412)
T ss_dssp HC
T ss_pred hc
Confidence 64
No 96
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.96 E-value=1.8e-29 Score=233.22 Aligned_cols=303 Identities=12% Similarity=0.055 Sum_probs=204.7
Q ss_pred CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHH--HHHHHHHHh-cC--------CceEEEEcCCCCCCchhhhhhcCC
Q 017633 31 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACM--GVLRLARAF-TG--------RERIIKFEGCYHGHADPFLVKAGS 98 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~--~al~~~~~~-~~--------~~~vi~~~~~~~~~~~~~~~~~~~ 98 (368)
+.....+|++.++++++ +++++++|+|+++++. .+++.+... ++ ++.|++..++|++....+... |.
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~ 146 (423)
T 3ez1_A 68 GVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL-GF 146 (423)
T ss_dssp CTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH-TC
T ss_pred CCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc-CC
Confidence 44567899999999998 7789999999999997 777665331 23 589999999998865443333 33
Q ss_pred CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH-HHhCCEE
Q 017633 99 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT-KENGALL 177 (368)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~-~~~~~~l 177 (368)
.+...+... .++ |+++|++++++. +++++++++|+.+|++....+.+.+++|+++| ++||+++
T Consensus 147 ~~~~v~~~~-~g~--------------d~~~l~~~l~~~-~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~l 210 (423)
T 3ez1_A 147 ELLTVDMQS-DGP--------------DVDAVERLAGTD-PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTI 210 (423)
T ss_dssp EEEEEEEET-TEE--------------CHHHHHHHHHSC-TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEE
T ss_pred EEEeccCCC-CCC--------------CHHHHHHHHhhC-CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEE
Confidence 322111111 111 899999999632 47888888876555433444555599999999 9999999
Q ss_pred EEehhhhch-hcc-c-Cc--cc-------cccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 178 IFDEVMTGF-RLA-Y-GG--AQ-------EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 178 i~De~~~~~-~~g-~-~~--~~-------~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
|+||+|..+ ..+ . .. .. +..+....+.||||.+.+|+|+||+++++++++.+.. .....+++.++
T Consensus 211 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~---~~~~~~~~~~~ 287 (423)
T 3ez1_A 211 FADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSK---YLGAQSIGPNK 287 (423)
T ss_dssp EEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHH---HHHHSCSCCCH
T ss_pred EEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHH---HHhhhccCCCH
Confidence 999999753 222 1 11 11 1223445577999996689999999999998888762 33456678899
Q ss_pred HHHHHHHHHHHH-Hcc-----CCHHHHHHHHHHHHHHHHHHHHHhcC--CceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 246 LAMTAGIHTLKR-LKE-----PGTYEYLNKITGELTQGIIDAGKKAG--HAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 246 ~~~~a~~~~l~~-~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
+++.++.++++. ... ....+.+.++++.+++.|.+.+...+ .....+..+.++|+.+..
T Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~------------- 354 (423)
T 3ez1_A 288 VEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE------------- 354 (423)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS-------------
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC-------------
Confidence 999988888774 110 11223344455555555555444443 222234456788887732
Q ss_pred cHHHHHHHHHHHHcCeeecCCC----------CCccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQ----------FEAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~----------~~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
. +..++.+.|.++||.+.+++ ...+|+++.. +++++++++++|++++.+
T Consensus 355 ~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 355 P-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp S-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred C-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 1 24678888999999999832 1234665554 999999999999998864
No 97
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=1.3e-28 Score=223.45 Aligned_cols=317 Identities=12% Similarity=0.077 Sum_probs=219.2
Q ss_pred ccCCCcHHHHHHHHHHHHcCC--------C-CCCCChhHHHHHHH-HHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC
Q 017633 6 ILFPSYLQVLAALGETMKKGT--------S-FGAPCLLENVLAEM-VISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~--------~-~~~~~~~~~~l~~~-l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
+.++.+|++++++.+++.... . ...+.+...+++++ ++++++.. ++++++||++|+..+++.+ ..++
T Consensus 17 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~--~~~g 93 (371)
T 2e7j_A 17 TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSL--AKKD 93 (371)
T ss_dssp HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHH--CCTT
T ss_pred cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHH--hCCC
Confidence 356678999999998876531 1 12356778999999 99999744 9999999999999999877 3567
Q ss_pred ceEEEEcCCCCCCchhhhhhcCCCccccC--CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC--CCeEEEEEcccCC
Q 017633 76 ERIIKFEGCYHGHADPFLVKAGSGVATLG--LPDSPGVPKGATYETLTAPFNDVSALENLFENNK--GEIAAIILEPVVG 151 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~--~~~~~~~~~~~~~ 151 (368)
+.|++..++|++.... +...|..+.... ......+ |++++++.++++. ++++++++++.++
T Consensus 94 d~vl~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~~~~--------------d~~~l~~~l~~~~~~~~~~~v~~~~~~n 158 (371)
T 2e7j_A 94 AWVVMDENCHYSSYVA-AERAGLNIALVPKTDYPDYAI--------------TPENFAQTIEETKKRGEVVLALITYPDG 158 (371)
T ss_dssp CEEEEETTCCHHHHHH-HHHTTCEEEEECCCCTTTCCC--------------CHHHHHHHHHHHTTTSCEEEEEEESSCT
T ss_pred CEEEEccCcchHHHHH-HHHcCCeEEEeecccCCCCCc--------------CHHHHHHHHHhhcccCCeEEEEEECCCC
Confidence 8999999999887555 333444332222 1111111 8999999998531 3678888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHH-hc
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM-VA 230 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~-~~ 230 (368)
++|.+.+ +++|.++|++||+++|+||+|+.+.. ......++.+..+.|+||++++|.|+||+++++++++. +.
T Consensus 159 ptG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~ 232 (371)
T 2e7j_A 159 NYGNLPD----VKKIAKVCSEYDVPLLVNGAYAIGRM--PVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLR 232 (371)
T ss_dssp TTCCCCC----HHHHHHHHHTTTCCEEEECTTTBTTB--CCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTC
T ss_pred CCcccCC----HHHHHHHHHHcCCeEEEECccccCCC--CCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhcc
Confidence 8898888 89999999999999999999975411 12233344333345889999977799999999887776 65
Q ss_pred CCCCccccc-----cCCCCHHHHHHHHHHHHHHccCCHHHHH--HHHHHHHHHHHHHHHHhcCCceEEee--ccceEEEE
Q 017633 231 PAGPMYQAG-----TLSGNPLAMTAGIHTLKRLKEPGTYEYL--NKITGELTQGIIDAGKKAGHAICGGY--ISGMFGFF 301 (368)
Q Consensus 231 ~~~~~~~~~-----t~~~~~~~~~a~~~~l~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~ 301 (368)
..... ... +++.++.+++++.++++.+.+ .+.+++ +++++++++.|++. ++....+. .++++++.
T Consensus 233 ~~~~~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~ 306 (371)
T 2e7j_A 233 RSEKY-KNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKL----GIKQLGDNPHNHDLMFFH 306 (371)
T ss_dssp BCSSC-TTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHT----TCEEESSSSCCSSEEEEE
T ss_pred ccccC-cccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc----CcEEecCCCccCceEEEE
Confidence 42221 111 445677778777788877654 455667 77778887777664 33222121 36677776
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC-------C--CCccc-cccC---CCHHHHHHHHHHHHHHHhhC
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS-------Q--FEAGF-TSLA---HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~--~~~~~-~~~~---~~~~~i~~~~~~l~~~l~~~ 368 (368)
+. +..++.+.|.++||.+.+. + ...+| +++. ++++++++++++|+++++++
T Consensus 307 ~~----------------~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 307 AE----------------VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp CH----------------HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CC----------------CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 51 3578889999999998761 1 23456 6544 79999999999999998764
No 98
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=3.3e-29 Score=232.93 Aligned_cols=304 Identities=15% Similarity=0.093 Sum_probs=196.1
Q ss_pred ChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHHHHHHHHHHHhcCCc--------------eEEEE-cCCCCCCc
Q 017633 32 CLLENVLAEMVISAV------P-SIEMVRFVNSGTEACMGVLRLARAFTGRE--------------RIIKF-EGCYHGHA 89 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~--------------~vi~~-~~~~~~~~ 89 (368)
.....++++.+++++ + +++++++|+||++|+..+++.+. .+++ .|++. .++|+++.
T Consensus 82 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~--~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~ 159 (444)
T 3if2_A 82 PQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFG--GAFVNEHSQDKESKSVDKSILLPLTPEYIGYS 159 (444)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSS--EEEECC-------CEEEEEEEESSSSCCGGGT
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHh--CCCccccccccccccccceEEEeCCCCccchh
Confidence 344567777777765 3 67899999999999999998763 2333 56665 77777654
Q ss_pred hhhhhhcCCCccccCCCCCCCCCCCCCCcccccC----------CCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 90 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP----------FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
....... .....+..++.++ .-|+++|++++.+..+++++++++..++++|.+++
T Consensus 160 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~- 224 (444)
T 3if2_A 160 DVHVEGQ--------------HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLT- 224 (444)
T ss_dssp TCCSSSC--------------CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCC-
T ss_pred hcccccc--------------hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCC-
Confidence 3211000 0000111112111 01899999885321146777777655566776655
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccC---ccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYG---GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY 236 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~---~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~ 236 (368)
.+.+++|+++|++||++||+||+|..+..+.. ......+...++.|+||...+|+|+||+++++++++.+.. ..
T Consensus 225 ~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~---~~ 301 (444)
T 3if2_A 225 DEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVSA---MN 301 (444)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHHHHHHH---HH
Confidence 44599999999999999999999964311111 1111234445677999985589999999999999888763 33
Q ss_pred ccccCCCCHHHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccc
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 311 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (368)
+..+++.+++++.++.+.++...- +.+.++++++++.+++.|.+.+...+.....+..+.++|+.+...
T Consensus 302 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~------ 375 (444)
T 3if2_A 302 AVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDL------ 375 (444)
T ss_dssp HHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTC------
T ss_pred HhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCC------
Confidence 445667788888888777762210 123445556666666666665433332223345567778776321
Q ss_pred hhcccccHHHHHHHHHHHHcCeeecCCCCC--------------ccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 312 DAKKSETTKFARFYRGMLEEGVYFAPSQFE--------------AGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~--------------~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++++.|.++||.+.++..+ .+|+++..+++++++++++|++++.+
T Consensus 376 ------~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 376 ------PISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp ------SSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 223578899999999999986432 35666666999999999999998864
No 99
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.96 E-value=4.2e-29 Score=230.46 Aligned_cols=319 Identities=11% Similarity=0.013 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC---CCC---eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP---SIE---MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~---~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
+.+.+++.+........+.+.....++++.+++++. +.+ ++++|+||++|+..+++.+ ..++|.|++..++|
T Consensus 59 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--~~~gd~Vl~~~p~~ 136 (418)
T 3rq1_A 59 KTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNY--TEPGDEVLTADWYW 136 (418)
T ss_dssp HHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH--SCTTCEEEEESSCC
T ss_pred HHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHh--cCCCCEEEECCCCc
Confidence 456666655332211122233345666777766542 345 9999999999999999866 35678999999988
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC--CCCeEEEEEccc-CCCCCcccCCHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIAAIILEPV-VGNSGFIAPKPDF 162 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~--~~~~~~~~~~~~-~~~~g~~~~~~~~ 162 (368)
+++...+ ...|..+...++....+.. |++++++.+++. ++.++++++++. +|++|.+.+.++
T Consensus 137 ~~~~~~~-~~~g~~~~~v~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~- 201 (418)
T 3rq1_A 137 GAYRVIC-SDTGRTLVTYSLFDEHNNF-------------NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKD- 201 (418)
T ss_dssp THHHHHH-HHTTCEEEEECSBCTTSSB-------------CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHH-
T ss_pred hhHHHHH-HHcCCEEEEEeeeCCCCCc-------------CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHH-
Confidence 8765443 3334333222221111111 899999999742 123445666544 566776665444
Q ss_pred HHHHHHHHH------HhCCEEEEehhhhch-hccc---CccccccCCCcc-----hhhhhhhcc-CCccceeeee---hH
Q 017633 163 LNAIRRITK------ENGALLIFDEVMTGF-RLAY---GGAQEYFGVTPD-----LTTLGKIIG-GGLPVGAYGG---RR 223 (368)
Q Consensus 163 l~~i~~l~~------~~~~~li~De~~~~~-~~g~---~~~~~~~~~~~d-----i~s~sK~~~-~G~~iG~v~~---~~ 223 (368)
+++|+++|+ +||+++|+||+|.+| +.+. .+.....++.++ +.||||.++ +|+|+||+++ ++
T Consensus 202 l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~ 281 (418)
T 3rq1_A 202 WDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE 281 (418)
T ss_dssp HHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH
Confidence 999999999 899999999999888 5442 111222333333 238999998 8999999988 88
Q ss_pred HHHHHhcCCCCcccc-ccCCCCHHHHHHHHHHHHHHc------c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 224 DIMEMVAPAGPMYQA-GTLSGNPLAMTAGIHTLKRLK------E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 224 ~~~~~~~~~~~~~~~-~t~~~~~~~~~a~~~~l~~~~------~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
++++.+......... ...+.+.+++.++.++++... + ..+.++++++++.+.+.|+++ +.....+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~ 357 (418)
T 3rq1_A 282 EIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV----GLPMLPYRG 357 (418)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCCCCCS
T ss_pred HHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCc
Confidence 888877632111111 223578888888777664210 0 123344555555555555554 333233334
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhhC
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~ 368 (368)
+.++|+.+ .+..++++.|.++||.+.+++ ..+|+++. .+++++++++++|+++++++
T Consensus 358 ~~~~~~~~----------------~~~~~~~~~l~~~gi~v~~g~-~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 358 GFFITIPT----------------DSANAICEELKKEHIYVIALA-NGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp SSEEEEEC----------------TTHHHHHHHHHHTTEECEECS-SEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred eEEEEcCC----------------CCHHHHHHHHHhCCEEEecCC-CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 44555543 124678889999999999974 34677665 59999999999999998753
No 100
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.96 E-value=6.1e-29 Score=229.29 Aligned_cols=328 Identities=13% Similarity=0.066 Sum_probs=206.1
Q ss_pred ceeccCCCcH--------HHHHHHHHHHHcCC-----CCCCCChhHHHHHHHHHhhC------C-CCCeEEEeCChHHHH
Q 017633 3 QLIILFPSYL--------QVLAALGETMKKGT-----SFGAPCLLENVLAEMVISAV------P-SIEMVRFVNSGTEAC 62 (368)
Q Consensus 3 ~~~~~g~~~~--------~v~~a~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~------~-~~~~v~~~~~gt~a~ 62 (368)
..++||++.| .+++++.+.+.+.. ..+.+.....++++.+++++ + ++++|++|+||++|+
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al 111 (417)
T 3g7q_A 32 GAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAF 111 (417)
T ss_dssp CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHH
Confidence 4567777543 23444444443321 12334455677888888775 3 578999999999999
Q ss_pred HHHHHHHHHhcCCc-----eEEEE-cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC------CCHHHH
Q 017633 63 MGVLRLARAFTGRE-----RIIKF-EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF------NDVSAL 130 (368)
Q Consensus 63 ~~al~~~~~~~~~~-----~vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l 130 (368)
..+++.+. .+++ .|++. .++|++........... ...+..+..++. -|++++
T Consensus 112 ~~~~~~l~--~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~~~l 175 (417)
T 3g7q_A 112 FYLFNLFA--GRRADGSTKKVLFPLAPEYIGYADSGLEDDLF--------------VSARPNIELLPEGQFKYHVDFEHL 175 (417)
T ss_dssp HHHHHHHS--BC----CCBEEEESSCCCHHHHHC-----CCE--------------EECCCEEEEEGGGEEEEECCGGGC
T ss_pred HHHHHHHc--CCCccCCcceEEEeCCCccccchhhccchhhh--------------ccccCcccccCCcccccccCHHHh
Confidence 99998773 2333 78886 88888754332211100 000011111111 167777
Q ss_pred HHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC---ccccccCCCcchhhhh
Q 017633 131 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG---GAQEYFGVTPDLTTLG 207 (368)
Q Consensus 131 e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~---~~~~~~~~~~di~s~s 207 (368)
+ ++ ++++++++++.+|++|.+++.++ +++|+++|++||+++|+||+|..+..+.. ......+....+.|||
T Consensus 176 ~--~~---~~~~~v~~~~p~NptG~~~~~~~-~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 249 (417)
T 3g7q_A 176 H--IG---EETGMICVSRPTNPTGNVITDEE-LMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLS 249 (417)
T ss_dssp C--CC---TTEEEEEEESSCTTTCCCCCHHH-HHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESG
T ss_pred c--cc---cCceEEEECCCCCCCCCccCHHH-HHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEech
Confidence 6 33 46777777666666776665554 99999999999999999999965311111 0111223344567999
Q ss_pred hhccCCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHHHHHH
Q 017633 208 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAG 282 (368)
Q Consensus 208 K~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~~~ 282 (368)
|...+|+|+||+++++++++.+.. ..+..+++++++++.++.+.++...- +.+.++++++++.+++.|.+.+
T Consensus 250 K~~~~G~r~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 326 (417)
T 3g7q_A 250 KLGLPGSRCGIIIANDKTITAIAN---MNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYL 326 (417)
T ss_dssp GGTCTTSCCEEEECCHHHHHHHHH---HHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHC
T ss_pred hccCCCcceEEEEeCHHHHHHHHH---hhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 954489999999999999888763 33556667788888888777762210 1133445556666666666654
Q ss_pred HhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-------------CccccccCC
Q 017633 283 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------EAGFTSLAH 349 (368)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------------~~~~~~~~~ 349 (368)
...+.....+..+.++|+.+... ..+..++++.|.++||.+.++.. ..+|+++..
T Consensus 327 ~~~~~~~~~~~~g~~~~~~~~~~------------~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~ 394 (417)
T 3g7q_A 327 SEERCLIHKPEGAIFLWLWFKDL------------PITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP 394 (417)
T ss_dssp CTTTCEEECCCBSSEEEEECTTC------------SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS
T ss_pred ccCCceeeCCCcceEEEEEcCCC------------CCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC
Confidence 33333333445577778776321 22357889999999999988632 245666667
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 017633 350 SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 350 ~~~~i~~~~~~l~~~l~~ 367 (368)
+++++++++++|++++.+
T Consensus 395 ~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 395 EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998864
No 101
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.96 E-value=7.8e-29 Score=227.94 Aligned_cols=313 Identities=15% Similarity=0.086 Sum_probs=203.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++ +++......+.+.....++++.+++++ + +.+++++++||++|+..+++.+ ..+++.|++..
T Consensus 57 ~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~--~~~gd~Vl~~~ 133 (409)
T 2gb3_A 57 TPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI--ANPGDEILVLE 133 (409)
T ss_dssp CCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHH--CCTTCEEEEEE
T ss_pred CCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHh--CCCCCEEEEcC
Confidence 567899999 887653222222223345555555544 2 3588999999999999999876 35678999999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCC-HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
++|++..... ...|..+...+.....++ + +++|+++++ ++++++++++.++++|.+. +.+
T Consensus 134 ~~~~~~~~~~-~~~g~~~~~v~~~~~~~~--------------~~~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~ 194 (409)
T 2gb3_A 134 PFYANYNAFA-KIAGVKLIPVTRRMEEGF--------------AIPQNLESFIN---ERTKGIVLSNPCNPTGVVY-GKD 194 (409)
T ss_dssp SCCTHHHHHH-HHHTCEEEEEECCGGGTS--------------CCCTTGGGGCC---TTEEEEEEESSCTTTCCCC-CHH
T ss_pred CCchhHHHHH-HHcCCEEEEeccCCCCCC--------------ccHHHHHHhhC---cCCeEEEECCCCCCCCCCc-CHH
Confidence 9998765433 333433222111100011 2 456666665 3677777776666677665 455
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccc--hhhhhhhcc-CCccceeeeehH-HHHHHhcCCCCc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPD--LTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAGPM 235 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~d--i~s~sK~~~-~G~~iG~v~~~~-~~~~~~~~~~~~ 235 (368)
++++|+++|++||+++|+||+|+++ +.+..... ..+. ..| +.|+||.++ +|+|+||+++++ ++++.+.. .
T Consensus 195 ~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~---~ 270 (409)
T 2gb3_A 195 EMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMK---L 270 (409)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHH---H
T ss_pred HHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHH---H
Confidence 6999999999999999999999887 44432222 1122 234 458999998 799999999988 88887762 2
Q ss_pred cccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcccch
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFED 312 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
....+ +.+++++.++.++++...+ +.+.+++.++++++++.|++ .++.. ..+..+.++|+.+.
T Consensus 271 ~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~--------- 336 (409)
T 2gb3_A 271 AQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE----HGLKRFTKPSGAFYITAELP--------- 336 (409)
T ss_dssp HHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCBCCCSBSSEEEEECS---------
T ss_pred HhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH----cCceeeeCCCeeEEEEEEeC---------
Confidence 23333 7788888888877752110 22334445555555555544 34332 22334556666552
Q ss_pred hcccccHHHHHHHHHHHHc------CeeecCCC---------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 313 AKKSETTKFARFYRGMLEE------GVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~------Gi~~~~~~---------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|+++ ||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 337 -----~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 337 -----VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp -----SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 11246789999987 99998762 2345676668999999999999998864
No 102
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.96 E-value=1.3e-28 Score=222.17 Aligned_cols=289 Identities=12% Similarity=0.074 Sum_probs=195.5
Q ss_pred CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCC-ceEEEEcCCCCCCchhhhhhcCCCccccCCCC
Q 017633 30 APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 107 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (368)
|++....++++.++++++ +++++++++|++++++.+++.+. .++ ++|++..++|++....+.. .|..+...+..
T Consensus 55 Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~--~~g~d~Vl~~~p~~~~~~~~~~~-~g~~~~~v~~~- 130 (356)
T 1fg7_A 55 YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC--EPGKDAILYCPPTYGMYSVSAET-IGVECRTVPTL- 130 (356)
T ss_dssp CCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC--CTTTCEEEECSSSCTHHHHHHHH-HTCEEEECCCC-
T ss_pred CCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh--CCCCCEEEEeCCChHHHHHHHHH-cCCEEEEeeCC-
Confidence 344447899999999997 67899999999999999998762 355 8999999999886544433 34333221111
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
.... .|++++++.++ +++++++++.++++|.+.+ .+++++|+++|+ ||+++|+||+|.++
T Consensus 131 -~~~~------------~d~~~l~~~i~----~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~~~~~~ 191 (356)
T 1fg7_A 131 -DNWQ------------LDLQGISDKLD----GVKVVYVCSPNNPTGQLIN-PQDFRTLLELTR-GKAIVVADEAYIEFC 191 (356)
T ss_dssp -TTSC------------CCHHHHHTSCT----TEEEEEEESSCTTTCCCCC-HHHHHHHHHHHT-TTCEEEEECTTGGGS
T ss_pred -CCCC------------CCHHHHHHHhc----CCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCCEEEEEccchhhc
Confidence 1100 17888888775 4666666665666776654 566999999999 99999999999887
Q ss_pred hcccCccc-cccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 187 RLAYGGAQ-EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 187 ~~g~~~~~-~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
........ +.++....+.|+||.++ +|+|+||+++++++++.+... ..+++.|++++.++.++++.... ++.
T Consensus 192 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~-~~~ 265 (356)
T 1fg7_A 192 PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKV-----IAPYPLSTPVADIAAQALSPQGI-VAM 265 (356)
T ss_dssp GGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHH-----SCSSCSCHHHHHHHHHHTSHHHH-HHH
T ss_pred CCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCccH-HHH
Confidence 32222221 22334445679999999 899999999999988887632 23457889999888877753210 113
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-ceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecC-CCC--
Q 017633 265 EYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAP-SQF-- 340 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-~~~-- 340 (368)
++..++.+..++.+.+.+.+.+. ....+..++++++.+. +..++.+.|.++||.+++ +..
T Consensus 266 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----------------~~~~l~~~L~~~gI~v~~~g~~~~ 329 (356)
T 1fg7_A 266 RERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----------------ASSAVFKSLWDQGIILRDQNKQPS 329 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----------------THHHHHHHHHHTTEECEECTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC----------------CHHHHHHHHHHCCEEEEECCCCCC
Confidence 44444444444444444444442 1233455667777651 246789999999999998 532
Q ss_pred --CccccccCCCHHHHHHHHHHHHHH
Q 017633 341 --EAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 341 --~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
..+|+++. +++|+++++++|+++
T Consensus 330 ~~~~iRis~~-~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 330 LSGCLRITVG-TREESQRVIDALRAE 354 (356)
T ss_dssp CTTEEEEECC-CHHHHHHHHHHHHTC
T ss_pred CCCeEEEEeC-CHHHHHHHHHHHHhh
Confidence 23566554 689999999998764
No 103
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.96 E-value=2.5e-29 Score=232.00 Aligned_cols=318 Identities=13% Similarity=0.040 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC-------CCC--eEEEeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 12 LQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP-------SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~--~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
|.+++++.+++.....+ +.+.....++++.+++++. +++ ++++|+||++|+..++++.....++|.|++.
T Consensus 70 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~ 149 (420)
T 4f4e_A 70 RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAIS 149 (420)
T ss_dssp HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEe
Confidence 79999999988763322 3334455677777777652 356 8999999999999997654445678899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.++|++....+.. .|..+...++ ....... |++++++.+++++++++++++++.+|++|.+.+ .
T Consensus 150 ~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~-~ 214 (420)
T 4f4e_A 150 DPSWENHRALFDM-AGFEVVAYPYYDAKTNGV-------------NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLN-D 214 (420)
T ss_dssp ESCCHHHHHHHHH-TTCCEEEEECEETTTTEE-------------CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCC-H
T ss_pred CCCcHhHHHHHHH-cCCeEEEeeeeccccCcc-------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCC-H
Confidence 9999876443333 3333322111 1111111 899999999866557788887777777776554 5
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hccc--Ccccc----ccCCCcchhhhhhhcc-CCccceeeee---hHHHHHHh
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQE----YFGVTPDLTTLGKIIG-GGLPVGAYGG---RRDIMEMV 229 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~~~----~~~~~~di~s~sK~~~-~G~~iG~v~~---~~~~~~~~ 229 (368)
+.+++|+++|++||+++|+||+|.++ ..+. ..... ..+....+.||||.++ +|+|+||+++ ++++++.+
T Consensus 215 ~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~ 294 (420)
T 4f4e_A 215 AQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARV 294 (420)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHH
Confidence 55999999999999999999999888 4321 11111 1222334568999999 7999999853 45554432
Q ss_pred cC-CCCccccccCCCCHHHHHHHHHHHHHH------cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 230 AP-AGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 230 ~~-~~~~~~~~t~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
.. ........+.+++.+++.++.+.++.. .+ +.+.++++++++.+.+.|++.....++....+..+.+.|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~ 374 (420)
T 4f4e_A 295 LSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYS 374 (420)
T ss_dssp HHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEEC
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEe
Confidence 21 001112234455677777766655421 00 2234555555666656555542211332222334445554
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccCC-CHHHHHHHHHHHHHHH
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAH-SSDDIQHTITAAEKVL 365 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l 365 (368)
.+. ...+...|.++||.+.+++ |+++.. +++++++++++|++++
T Consensus 375 ~~~-----------------~~~~~~~l~~~gI~v~~~~----Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 375 GLT-----------------SAQVDRLREEFGIYAVSTG----RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCC-----------------HHHHHHHHHHHCEECCTTS----EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCC-----------------HHHHHHHHHhCCEEecCCC----eEEEecCCHHHHHHHHHHHHHHh
Confidence 331 2456667778899999975 554443 7888999999999886
No 104
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.96 E-value=4e-27 Score=214.71 Aligned_cols=309 Identities=17% Similarity=0.145 Sum_probs=212.5
Q ss_pred cC-CCcHHHHHHHHHHHHc-CC-----CC-CCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 7 LF-PSYLQVLAALGETMKK-GT-----SF-GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 7 ~g-~~~~~v~~a~~~~~~~-~~-----~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
+| +.+|++++++.+++.. .. .+ +...+...++++.++++++- ++.+++++|++++..+++.+ ..+++.|
T Consensus 50 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sGt~a~~~~~~~~--~~~gd~v 126 (384)
T 1bs0_A 50 LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY-SRALLFISGFAANQAVIAAM--MAKEDRI 126 (384)
T ss_dssp TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHH--CCTTCEE
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEeCCcHHHHHHHHHHh--CCCCcEE
Confidence 67 4889999999998876 21 12 12457889999999999863 35667778899999998765 3455666
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
++.. .+|+.....+...|. +++.+|..|++++++.+++..+.++++++++.++++|.+.+
T Consensus 127 ~~~~-~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~ 186 (384)
T 1bs0_A 127 AADR-LSHASLLEAASLSPS-------------------QLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP 186 (384)
T ss_dssp EEET-TCCHHHHHHHHTSSS-------------------EEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC
T ss_pred EEcc-cccHHHHHHHHHcCC-------------------CEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC
Confidence 5555 455544444443333 23334445899999999864334788888888888898888
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHHhcCCC
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
+++|+++|++||+++|+||+|+.+ . .+... ...++..+|++ |+||.+++ +.||+++++++++.+....
T Consensus 187 ----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~~--~GG~~~~~~~~~~~l~~~~ 259 (384)
T 1bs0_A 187 ----LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS-CWLQKVKPELLVVTFGKGFGV--SGAAVLCSSTVADYLLQFA 259 (384)
T ss_dssp ----HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH-HHHTTCCCSEEEEESSSTTSS--CCEEEEECHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHcCcEEEEECCcccceecCCCCch-HHhcCCCCcEEEeeccchhhc--cCcEEEeCHHHHHHHHHhc
Confidence 999999999999999999999643 2 22221 23455567776 89999983 3399999998888776322
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.. ...+.+.++++++++.++++.+.+ +++.++++++++++++.|++ .+.. ...+.++++++.+.
T Consensus 260 ~~-~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~------- 326 (384)
T 1bs0_A 260 RH-LIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD----LPFT-LADSCSAIQPLIVG------- 326 (384)
T ss_dssp HH-HHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT----SSCE-ECSCCSSBCCEEEE-------
T ss_pred hh-hhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh----cCCc-ccCCCCCEEEEEeC-------
Confidence 11 223346789999999988887752 23445555555555555544 3432 12245666677652
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCCC-------Cccccc--cCCCHHHHHHHHHHHHHH
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------~~~~~~--~~~~~~~i~~~~~~l~~~ 364 (368)
...+..++.+.|.++||.+.++.. ..+|++ ..++++++++++++|+++
T Consensus 327 ------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 327 ------DNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp ------SHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 234567899999999999998643 234543 445899999999999875
No 105
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.96 E-value=4e-29 Score=229.02 Aligned_cols=318 Identities=14% Similarity=0.014 Sum_probs=199.5
Q ss_pred HHHHHHHHH-HHHcCCCCCC-CChhHHHHHHHHHhhCC-------CCC--eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 12 LQVLAALGE-TMKKGTSFGA-PCLLENVLAEMVISAVP-------SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 12 ~~v~~a~~~-~~~~~~~~~~-~~~~~~~l~~~l~~~~~-------~~~--~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
|++++++.+ ++.....+++ +.....++++.+++++. +++ ++++|+||++++..++++.....+++.|++
T Consensus 47 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~ 126 (397)
T 3fsl_A 47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWV 126 (397)
T ss_dssp HHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEE
Confidence 799999998 8775322222 33445667777776652 356 899999999999999765444467889999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
..++|++....+.. .|..+...+. +...+.. |++++++.++++++++++++++..+|++|.+.+
T Consensus 127 ~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~- 191 (397)
T 3fsl_A 127 SDPTWENHVAIFAG-AGFEVSTYPWYDEATNGV-------------RFNDLLATLKTLQAGSIVLLHPCCHNPTGADLT- 191 (397)
T ss_dssp ESSCCHHHHHHHHH-TTCCEEEECCEETTTTEE-------------CHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCC-
T ss_pred eCCCchhHHHHHHH-cCCceEEEeeeeccCCcC-------------cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCC-
Confidence 99999876443333 3333322111 0011111 899999999875456777777666666776555
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hcc--cCccc----cccCCCcchhhhhhhcc-CCccceeeee---hHHHHHH
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLA--YGGAQ----EYFGVTPDLTTLGKIIG-GGLPVGAYGG---RRDIMEM 228 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g--~~~~~----~~~~~~~di~s~sK~~~-~G~~iG~v~~---~~~~~~~ 228 (368)
.+.+++|+++|++||+++|+||+|.++ ..+ ..... +..+....+.||||.++ +|+|+||+++ ++++++.
T Consensus 192 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~ 271 (397)
T 3fsl_A 192 NDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGR 271 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHH
Confidence 444999999999999999999999887 431 11111 12233344668999999 8999999964 4555543
Q ss_pred hcCC-CCccccccCCCCHHHHHHHHHHHHHH------cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEE
Q 017633 229 VAPA-GPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 299 (368)
Q Consensus 229 ~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (368)
+... .......+.+++.+++.++.+.++.. .+ +.+.++++++++++++.|++.....+.....+..+.+.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 3fsl_A 272 VLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSY 351 (397)
T ss_dssp HHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEE
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEe
Confidence 3210 01112234445667777666555411 01 234555666666666666664321123222233345555
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccCC-CHHHHHHHHHHHHHHH
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAH-SSDDIQHTITAAEKVL 365 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l 365 (368)
+.+. ...+...|.++||.+.+++ |+++.. +++++++++++|++++
T Consensus 352 ~~~~-----------------~~~~~~~l~~~gi~v~~g~----Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 352 TGLS-----------------AAQVDRLREEFGVYLIASG----RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp CCCC-----------------HHHHHHHHHTTCEECCTTC----EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred cCCC-----------------HHHHHHHHHhCCEEECCCC----eEEEEecCHhhHHHHHHHHHhhC
Confidence 4331 2446677778899999986 544444 7788999999998864
No 106
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.96 E-value=4.8e-29 Score=228.40 Aligned_cols=318 Identities=16% Similarity=0.079 Sum_probs=199.0
Q ss_pred CCcHHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC-------CCCeEEE--eCChHHHHHHHHHHHHHhcCCceE
Q 017633 9 PSYLQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP-------SIEMVRF--VNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
+.+|.+++++.+++.+...+ +.+.....++++++++++. +.+++++ ++||++|++.+++++....+++.|
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~V 123 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRV 123 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEE
Confidence 34589999998887653222 3355567788888888762 2678988 999999999999776544578899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
++..++|++....+.. .|..+...+... ..... |++++++.+++++++++++++...++++|.+
T Consensus 124 l~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~- 188 (396)
T 2q7w_A 124 WVSNPSWPNHKSVFNS-AGLEVREYAYYDAENHTL-------------DFDALINSLNEAQAGDVVLFHGCCHNPTGID- 188 (396)
T ss_dssp EEEESCCTHHHHHHHH-TTCEEEEEECEETTTTEE-------------CHHHHHHHHTTCCTTCEEEEECSSCTTTCCC-
T ss_pred EEcCCCchhHHHHHHH-cCCceEEEecccCCCCCc-------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-
Confidence 9999999986544433 233222111100 01101 7999999998543346666655555556654
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc--cCccccccC----CCcchhhhhhhcc-CCccceeeee---hH---
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLA--YGGAQEYFG----VTPDLTTLGKIIG-GGLPVGAYGG---RR--- 223 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g--~~~~~~~~~----~~~di~s~sK~~~-~G~~iG~v~~---~~--- 223 (368)
.+.+++++|+++|++||+++|+||+|.++ +.+ .......+. ....+.|+||.++ +|+|+||+++ ++
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~ 268 (396)
T 2q7w_A 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETV 268 (396)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHH
Confidence 45556999999999999999999999887 432 222222121 1122568999999 8999999986 55
Q ss_pred -HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHH------cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec
Q 017633 224 -DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 294 (368)
Q Consensus 224 -~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 294 (368)
++++.+.. .....+.++++++++++.++++.. .+ +.+.++++++++++.+.|++.....++....+..
T Consensus 269 ~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 345 (396)
T 2q7w_A 269 DRAFSQMKA---AIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN 345 (396)
T ss_dssp HHHHHHHHH---HHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred HHHHHHHHH---HHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC
Confidence 34444431 112223345888888887777532 00 1233445555555555555432100122122233
Q ss_pred cceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHH
Q 017633 295 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVL 365 (368)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l 365 (368)
+.++|+.+ + ...+...|.++||.+.++ +|+++. .+++++++++++|++++
T Consensus 346 ~~~~~~~~--------------~---~~~~~~~l~~~gv~v~~~----~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 346 GMFSFSGL--------------T---KEQVLRLREEFGVYAVAS----GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp SSEEECCC--------------C---HHHHHHHHHHHCEECCTT----CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred ceEEEecC--------------C---HHHHHHHHHhcCeeecCC----ceEEEeecCHHHHHHHHHHHHhcC
Confidence 44444432 1 134566677889999985 355433 38999999999998764
No 107
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.96 E-value=3.9e-28 Score=222.65 Aligned_cols=313 Identities=14% Similarity=0.111 Sum_probs=202.6
Q ss_pred CcHHHHHHHHHHHHcC----CCCCC-CChhHHHHHHHHHhh--CC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 10 SYLQVLAALGETMKKG----TSFGA-PCLLENVLAEMVISA--VP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~----~~~~~-~~~~~~~l~~~l~~~--~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
.+|.+++++.+++... ..+++ +.....++++.++++ .+ ..+++++++|+++++..++.++ .+++.|++
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~~---~~gd~Vl~ 123 (400)
T 3asa_A 47 LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFF---GPNQTVAI 123 (400)
T ss_dssp CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHHH---CSSCEEEE
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHHc---CCCCEEEE
Confidence 5788999999888652 12223 445678999999998 34 4689999999999999866543 46789999
Q ss_pred EcCCCCCCchhhhhhcCCC-ccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 81 FEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
..++|++....+ ...|.. +...+.....++. .|++ + + ++++++++++.++++|.+. +
T Consensus 124 ~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~------------~~l~---~-~----~~~~~v~l~~p~nptG~~~-~ 181 (400)
T 3asa_A 124 QDPSYPAYLDIA-RLTGAKEIIALPCLQENAFF------------PEFP---E-D----THIDILCLCSPNNPTGTVL-N 181 (400)
T ss_dssp EESCCHHHHHHH-HHTTCSEEEEEECCGGGTTC------------CCCC---T-T----CCCSEEEEESSCTTTCCCC-C
T ss_pred CCCCcHHHHHHH-HHcCCcceEecccchhcCcc------------cChh---h-c----cCccEEEEeCCCCCCCCcC-C
Confidence 999998865433 333433 2221111100110 0221 1 1 2456666655555567655 5
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hccc-CccccccC----CCcchhhhhhhcc-CCccceeeeehHHH-------
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFG----VTPDLTTLGKIIG-GGLPVGAYGGRRDI------- 225 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~-~~~~~~~~----~~~di~s~sK~~~-~G~~iG~v~~~~~~------- 225 (368)
.+++++|+++|++||+++|+||+|.++ ..+. ......++ ....+.|+||.++ +|+|+||+++++++
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~ 261 (400)
T 3asa_A 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF 261 (400)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB
T ss_pred HHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh
Confidence 666999999999999999999999987 4443 12222222 2234679999998 89999999988776
Q ss_pred HHHhcCCCCccccccC-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEE-ee
Q 017633 226 MEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF-FT 303 (368)
Q Consensus 226 ~~~~~~~~~~~~~~t~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~ 303 (368)
++.+.. .....++ +.+.+++.++.++++...-+.+.++++++++++++.|++. +.....+..+.++|+. +.
T Consensus 262 ~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~ 334 (400)
T 3asa_A 262 VIQDWE---RFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT----GFEVFGGEHAPYLWVKPTQ 334 (400)
T ss_dssp HHHHHH---HHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT----TCEEEECSSSSEEEEECCC
T ss_pred HHHHHH---HHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC----CCeeeCCCCceEEEEeccC
Confidence 444431 1122333 5788999988888875422445667777777777777653 4332222346677877 42
Q ss_pred cCCCcccchhcccccHHHHHHHHHHHH-cCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 304 EGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. ..+..++++.|++ +||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 335 ~-------------~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 335 A-------------NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp T-------------TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC----
T ss_pred C-------------CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 1 1112467777875 499999863 2346677778999999999999988764
No 108
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.96 E-value=6.7e-29 Score=229.27 Aligned_cols=300 Identities=10% Similarity=0.013 Sum_probs=201.9
Q ss_pred ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHH--HHHHHHHHHhc---C--------CceEEEEcCCCCCCchhhhhhcC
Q 017633 32 CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC--MGVLRLARAFT---G--------RERIIKFEGCYHGHADPFLVKAG 97 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~--~~al~~~~~~~---~--------~~~vi~~~~~~~~~~~~~~~~~~ 97 (368)
.....+|++.++++++ ++++|++|+|+++++ ..+++.+.. + + ++.|++..++|+++...+... |
T Consensus 75 ~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~-~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~-g 152 (422)
T 3d6k_A 75 LLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTW-GNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF-G 152 (422)
T ss_dssp SSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHH-CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH-T
T ss_pred CCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcC-cccccccccccCCCCEEEEeCCccHHHHHHHHHc-C
Confidence 3447899999999987 678999999999997 455555432 2 1 346999999998875444333 3
Q ss_pred CCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH-HhCCE
Q 017633 98 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK-ENGAL 176 (368)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~-~~~~~ 176 (368)
..+...+... .++ |++++++.++. .+++++++.|+.+|++....+.+++++|+++|+ +||++
T Consensus 153 ~~~~~v~~~~-~g~--------------d~~~l~~~l~~--~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~ 215 (422)
T 3d6k_A 153 FEMINVPMTD-EGP--------------DMGVVRELVKD--PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFR 215 (422)
T ss_dssp CEEEEEEEET-TEE--------------CHHHHHHHHTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCE
T ss_pred CEEEecCCCC-CCC--------------CHHHHHHHHhc--CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCE
Confidence 3322111111 111 89999999973 267888866665554334556666999999999 99999
Q ss_pred EEEehhhhc--h-hccc-Cccc-------cccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 177 LIFDEVMTG--F-RLAY-GGAQ-------EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 177 li~De~~~~--~-~~g~-~~~~-------~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|+||+|.. | ..+. .... +..+..+.+.||||...+|+|+||+++++++++.+.. .....+++.+.
T Consensus 216 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~---~~~~~~~~~~~ 292 (422)
T 3d6k_A 216 IVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYAS---HANVRGIGPNK 292 (422)
T ss_dssp EEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHH---HHHHHCSCCCH
T ss_pred EEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHH---HHHhhcCCCCH
Confidence 999999974 5 3332 1122 1234456678999995589999999999998888763 33445667899
Q ss_pred HHHHHHHHHHHHHc---c--CCHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 246 LAMTAGIHTLKRLK---E--PGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 246 ~~~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
+++.++.++++... + +...+.++++++.+++.|.+.+...+. ....+..+.++|+.+.. .
T Consensus 293 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~-------------~- 358 (422)
T 3d6k_A 293 LNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP-------------G- 358 (422)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST-------------T-
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC-------------C-
Confidence 99988887775210 0 112344455666666666665444432 21233456778887731 1
Q ss_pred HHHHHHHHHHHcCeeecCCCC----------CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 320 KFARFYRGMLEEGVYFAPSQF----------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~~----------~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
+..++.+.|.++||.+.+++. ..+|+++. ++++++++++++|++++.+
T Consensus 359 ~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 359 TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 235678888999999998421 23566666 6999999999999998764
No 109
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=5.9e-27 Score=214.88 Aligned_cols=314 Identities=20% Similarity=0.151 Sum_probs=213.4
Q ss_pred ccCC-CcHHHHHHHHHHHHcC-CC------CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 6 ILFP-SYLQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 6 ~~g~-~~~~v~~a~~~~~~~~-~~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
++|+ .+|++++++.+++.+. .. .+...+...++++.++++++..+.++++ +|++++..++.++....+++.
T Consensus 56 ~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~-sG~~a~~~~~~~l~~~~~gd~ 134 (401)
T 2bwn_A 56 YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFS-SAYNANDATLSTLRVLFPGLI 134 (401)
T ss_dssp TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEES-CHHHHHHHHHHHHHHHSTTCE
T ss_pred cccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEEC-CcHHHHHHHHHHHhcCCCCCE
Confidence 3344 4778999999988762 11 1224567899999999999865667765 678888888765433335677
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~ 156 (368)
|++..+.|+... ......| .+++.++.+|++++++.+++.. ++++++++++.++++|.+
T Consensus 135 Vl~~~~~~~~~~-~~~~~~g-------------------~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~ 194 (401)
T 2bwn_A 135 IYSDSLNHASMI-EGIKRNA-------------------GPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDF 194 (401)
T ss_dssp EEEETTCCHHHH-HHHHHSC-------------------CCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCB
T ss_pred EEECchhhHHHH-HHHHHcC-------------------CeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCc
Confidence 887776665433 2222222 2344455558999999998643 368889999988889998
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhh-ch--hcccCccccccCC----Ccchhhhhhhcc-CCccceeeeehHHHHHH
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV----TPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~-~~--~~g~~~~~~~~~~----~~di~s~sK~~~-~G~~iG~v~~~~~~~~~ 228 (368)
.+ +++|+++|++||+++|+||+|+ ++ ..|..+. ...++ .+.+.|+||+++ +| ||+++++++++.
T Consensus 195 ~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~ 266 (401)
T 2bwn_A 195 GP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA-ERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDA 266 (401)
T ss_dssp CC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-HHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHH
T ss_pred CC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-eccCccccCcEEEeechhhccCCC---CEEecCHHHHHH
Confidence 88 9999999999999999999997 33 2333222 33333 334569999998 44 889888888877
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 305 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (368)
+........ .+.+.++++++++.++++.+.+. .+.++++++++++++.|++. +.... ...++++++.+.
T Consensus 267 l~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~-~~~~~~~~~~~~-- 338 (401)
T 2bwn_A 267 VRSYAPGFI-FSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL----GMPII-DHGSHIVPVVIG-- 338 (401)
T ss_dssp HHHHCHHHH-TSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH----TCCBC-CCSSSCEEEECC--
T ss_pred HHHhCcCce-ecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC----CCccc-CCCCCeEEEEeC--
Confidence 653221112 12244678888888899887542 45677777778887777765 22211 233457777652
Q ss_pred CCcccchhcccccHHHHHHHHHHH-HcCeeecCCCC-------Cccccc--cCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~-------~~~~~~--~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++.+.|+ ++||.+.++.. ..+|++ ..++++|+++++++|++++++
T Consensus 339 -----------~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 339 -----------DPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -----------CHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -----------ChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 2344678999996 78999987532 234543 447999999999999998765
No 110
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=3.6e-27 Score=211.16 Aligned_cols=302 Identities=13% Similarity=0.093 Sum_probs=205.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
|+++ .+|.+++++.+.+..... ++.....++++.++++++ +.+++++++|+++++..++..+ +++.|++..+
T Consensus 26 ~~~~-~~~~v~~a~~~~~~~~~~--y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~----~gd~vl~~~p 98 (337)
T 3p1t_A 26 NPEA-VEPRVQAAIAAAAARINR--YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF----SSMRFVTAWP 98 (337)
T ss_dssp CCSC-CCHHHHHHHHHHGGGTTS--CCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS----TTSEEEEESS
T ss_pred CCCC-CCHHHHHHHHHhhhhhcc--CCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc----CCCeEEEeCC
Confidence 5666 678999999998776433 366788999999999998 6789999999999999998765 6789999998
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
+|++.... +...|..+...+.....++ |++++++. .+++++++...++++|.+.+ +
T Consensus 99 ~~~~~~~~-~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~-----~~~~~v~i~~p~nptG~~~~----~ 154 (337)
T 3p1t_A 99 GFDGYRAR-IAVSGLRHFEIGLTDDLLL--------------DPNDLAQV-----SRDDCVVLANPSNPTGQALS----A 154 (337)
T ss_dssp SCSHHHHH-HTTSCCEEEEECBCTTSSB--------------CHHHHTTC-----CTTEEEEEESSCTTTCCCCC----H
T ss_pred CcHHHHHH-HHHcCCEEEEecCCCCCCC--------------CHHHHHhh-----cCCCEEEEeCCCCCCCCCCC----H
Confidence 88875432 2333332222111111111 78888764 24566666666677888888 8
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccC
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 241 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~ 241 (368)
+++.++|+++++ +|+||+|.+| ..+.. .....+....+.|+||.++ +|+|+||+++++++++.+.... .++
T Consensus 155 ~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~-----~~~ 227 (337)
T 3p1t_A 155 GELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ-----WFC 227 (337)
T ss_dssp HHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS-----CTT
T ss_pred HHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc-----CCC
Confidence 899999999997 6669999877 33221 1122233344668999998 8999999999999988887422 345
Q ss_pred CCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHH
Q 017633 242 SGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 320 (368)
Q Consensus 242 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (368)
+.+.+++.++.++++.... +...+++.++++++.+.|++ .+.. ...+.+.++++... +
T Consensus 228 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~-------------~--- 286 (337)
T 3p1t_A 228 NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRG----LGYR-VASSEANFVLVENA-------------A--- 286 (337)
T ss_dssp CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTCC-BCCCSSSEEEEECT-------------T---
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CcCE-ECCCCCeEEEEEcC-------------C---
Confidence 6788888887777652211 12233444444444444444 4433 23445666666541 1
Q ss_pred HHHHHHHHHHcCeeecCCCC----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 321 FARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 321 ~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..++.+.|.++||.+.++.. ..+|+++. +++++++++++|+++.+
T Consensus 287 ~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 287 GERTLRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYSD 335 (337)
T ss_dssp THHHHHHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhh
Confidence 24677888999999998753 34566654 78999999999998764
No 111
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.96 E-value=4.4e-29 Score=228.53 Aligned_cols=320 Identities=15% Similarity=0.025 Sum_probs=202.5
Q ss_pred CCcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhC-C---CCCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 9 PSYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAV-P---SIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~-~---~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+.+|.+++++.+++.....+++ +.....++++.+++++ + +.+++++ ++||++|++.+++.+..+.+++.|++.
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~ 123 (394)
T 2ay1_A 44 PIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVS 123 (394)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEc
Confidence 3468999999888765322223 3455678888888876 3 3678998 999999999999877554567899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.++|++........ |..+...+... ..... |++++++.+++++++++++++.+.++++|.+ .+.
T Consensus 124 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~-~~~ 188 (394)
T 2ay1_A 124 DPTWPNHVSIMNFM-GLPVQTYRYFDAETRGV-------------DFEGMKADLAAAKKGDMVLLHGCCHNPTGAN-LTL 188 (394)
T ss_dssp ESCCHHHHHHHHHH-TCCEEEEECEETTTTEE-------------CHHHHHHHHHTCCTTCEEEEESSSCTTTCCC-CCH
T ss_pred CCCChhHHHHHHHc-CCceEEEecccccCCcc-------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCH
Confidence 99999865544333 33322111100 01101 7999999998643346666666666666765 455
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hcc--cCcccc---ccC-CCcchhhhhhhcc-CCccceeeee---hHHHHHHh
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLA--YGGAQE---YFG-VTPDLTTLGKIIG-GGLPVGAYGG---RRDIMEMV 229 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g--~~~~~~---~~~-~~~di~s~sK~~~-~G~~iG~v~~---~~~~~~~~ 229 (368)
+++++|+++|++||+++|+||+|+++ +.+ ...... ..+ ....+.|+||.++ +|+|+||+++ ++++++.+
T Consensus 189 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l 268 (394)
T 2ay1_A 189 DQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELA 268 (394)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHH
Confidence 66999999999999999999999887 432 111122 111 1122458999999 8999999987 66554332
Q ss_pred cCC-CCccccccCCCCHHHHHHHHHHHHHH------c--cCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 230 APA-GPMYQAGTLSGNPLAMTAGIHTLKRL------K--EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 230 ~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
... .......+.++++++++++.++++.. . -+.+.++++++++++.+.|++.....++....+..+.++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~ 348 (394)
T 2ay1_A 269 QGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRL 348 (394)
T ss_dssp HHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEEC
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEee
Confidence 210 01111222234888888888777633 1 12345556666666666666543110122122233555554
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccccc-CCCHHHHHHHHHHHHHH
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSL-AHSSDDIQHTITAAEKV 364 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~-~~~~~~i~~~~~~l~~~ 364 (368)
.+ + ...+...|.++||.+.++ +|+++ .++++++++++++|+++
T Consensus 349 ~~--------------~---~~~~~~~l~~~gi~v~~~----~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 349 GA--------------T---PEQVKRIKEEFGIYMVGD----SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp CC--------------C---HHHHHHHHHHHCEECCTT----CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CC--------------C---HHHHHHHHHhCCEEecCC----CeEEeecCCHhhHHHHHHHHHHc
Confidence 33 1 135667777899999986 34433 35899999999999876
No 112
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.8e-27 Score=217.09 Aligned_cols=318 Identities=13% Similarity=0.101 Sum_probs=214.3
Q ss_pred CCCcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 8 FPSYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
++.+|++++++.+++.. .++ ...+...++++++++.++ + .+++++++||++|+..+++.+ ..+++.|++..++
T Consensus 29 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l--~~~gd~vl~~~~~ 104 (386)
T 2dr1_A 29 VACFPEVLEIMKVQMFS--HRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNG--VSKGGKVLVTIIG 104 (386)
T ss_dssp CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHH--SCTTCEEEEEESS
T ss_pred cCCcHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHh--hcCCCeEEEEcCC
Confidence 34567788877665432 221 114677888999999887 3 577999999999999999876 3567899999999
Q ss_pred CCCC-chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 85 YHGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 85 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
|++. ........|..+....... .+. .|+++|++.+++. ++++++++++.++++|.+.+ +
T Consensus 105 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l 165 (386)
T 2dr1_A 105 AFGKRYKEVVESNGRKAVVLEYEP-GKA-------------VKPEDLDDALRKN-PDVEAVTITYNETSTGVLNP----L 165 (386)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCT-TCC-------------CCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----H
T ss_pred chhHHHHHHHHHhCCceEEEecCC-CCC-------------CCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCC----H
Confidence 9873 2233333343332221111 111 1899999999643 36777888777788888887 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC----------
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG---------- 233 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~---------- 233 (368)
++|.++|++||+++|+||+|+.... ......++.+.-+.++||+++++.++||+++++++++.+....
T Consensus 166 ~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
T 2dr1_A 166 PELAKVAKEHDKLVFVDAVSAMGGA--DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPL 243 (386)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTB--CCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHH
T ss_pred HHHHHHHHHcCCeEEEEccccccCc--cccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHH
Confidence 9999999999999999999974311 1222233332223467799996556999999998888774210
Q ss_pred ---Cc--cccccCCCCHHHHHHHHHHHHHHccC----CHHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEEEE
Q 017633 234 ---PM--YQAGTLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFF 301 (368)
Q Consensus 234 ---~~--~~~~t~~~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~ 301 (368)
.. ....+++.++++++++.++++.+.+. .+.++++++++++++.|++. +.....+ ..+.++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~ 319 (386)
T 2dr1_A 244 YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI----GLDILAEPGHESPTITAVL 319 (386)
T ss_dssp HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCCBSSCTTCBCSSEEEEE
T ss_pred HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc----CCeeCcCccccCCceEEEE
Confidence 00 12345577888999988888876544 34566666666666666653 3221111 135666776
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC----CccccccC--CCHHHHHHHHHHHHHHHhh
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLA--HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----~~~~~~~~--~~~~~i~~~~~~l~~~l~~ 367 (368)
+. ...+..++.+.|.++||.+.++.. ..+|+++. ++++++++++++|++++++
T Consensus 320 ~~-------------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 320 TP-------------PGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CC-------------TTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cC-------------CCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 52 112357899999999999998742 34565544 7999999999999998864
No 113
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.96 E-value=4.8e-28 Score=223.96 Aligned_cols=302 Identities=10% Similarity=-0.034 Sum_probs=205.4
Q ss_pred CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHH--HHHHHHHHHh-c---------CCceEEEEcCCCCCCchhhhhhcC
Q 017633 31 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEAC--MGVLRLARAF-T---------GRERIIKFEGCYHGHADPFLVKAG 97 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~--~~al~~~~~~-~---------~~~~vi~~~~~~~~~~~~~~~~~~ 97 (368)
+.....+|++.++++++ +++++++|+|+++++ +.+++.+... + +++.|++..++|++....+.. .|
T Consensus 76 ~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~-~g 154 (427)
T 3ppl_A 76 GLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITER-FG 154 (427)
T ss_dssp CSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHH-TT
T ss_pred CCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHH-cC
Confidence 34567899999999987 678999999999999 4777655331 2 178999999999876544333 33
Q ss_pred CCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH-HHhCCE
Q 017633 98 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT-KENGAL 176 (368)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~-~~~~~~ 176 (368)
..+...+... .++ |+++|+++++. +++++++++|..+|++....+.+.+++|+++| ++||++
T Consensus 155 ~~~~~v~~~~-~g~--------------d~~~l~~~l~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ 217 (427)
T 3ppl_A 155 FEMISVPMNE-DGP--------------DMDAVEELVKN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFR 217 (427)
T ss_dssp CEEEEEEEET-TEE--------------CHHHHHHHTTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCE
T ss_pred CEEEEeCCCC-CCC--------------CHHHHHHHHhc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCE
Confidence 3322111111 111 89999999952 47889988876655433444555599999999 999999
Q ss_pred EEEehhhhch-hcccC---ccc-------cccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCCCCH
Q 017633 177 LIFDEVMTGF-RLAYG---GAQ-------EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 245 (368)
Q Consensus 177 li~De~~~~~-~~g~~---~~~-------~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~ 245 (368)
+|+||+|.++ +.+.. ... +..+....+.||||...+|+|+||+++++++++.+.. .....+++.++
T Consensus 218 ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~---~~~~~~~~~~~ 294 (427)
T 3ppl_A 218 VVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTG---HAGIRGIGPNK 294 (427)
T ss_dssp EEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHH---HHHHHCSCCCH
T ss_pred EEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHH---HhhcccCCCCH
Confidence 9999999885 33221 111 1234455678999996689999999999998888762 33445677888
Q ss_pred HHHHHHHHHHHHH---cc--CCHHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeccceEEEEeecCCCcccchhcccccH
Q 017633 246 LAMTAGIHTLKRL---KE--PGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 319 (368)
Q Consensus 246 ~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
+++.++.++++.. .+ ....+.++++++.+.+.|.+.+...+ .....+..+.++|+.+.. .
T Consensus 295 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~-------------~- 360 (427)
T 3ppl_A 295 VNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP-------------G- 360 (427)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECST-------------T-
T ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCc-------------c-
Confidence 9888877776521 00 12344455566666666665444432 222334457778887631 1
Q ss_pred HHHHHHHHHHHcCeeecCCC----------CCccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 320 KFARFYRGMLEEGVYFAPSQ----------FEAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~----------~~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
+..++.+.|.++||.+.+++ ...+|+++.. +++++++++++|++++.+
T Consensus 361 ~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 361 TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLL 419 (427)
T ss_dssp CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 24678899999999999843 1234665555 899999999999998864
No 114
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=4.5e-27 Score=215.07 Aligned_cols=315 Identities=14% Similarity=0.064 Sum_probs=206.1
Q ss_pred CcHHHHHHHHHHHHcCCCC--C--CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh-----------c
Q 017633 10 SYLQVLAALGETMKKGTSF--G--APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-----------T 73 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~--~--~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~-----------~ 73 (368)
.+|++++++.+++...... . ...+...++++++++.++ +.+++++++||++|+..+++.++.. .
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~ 121 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKN 121 (397)
T ss_dssp CCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCC
Confidence 5678999999888753221 1 124566789999999998 6789999999999999999877553 2
Q ss_pred CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+++.|++..++|++... .....|..+...+.... +.. |+++++++++++ +++++++++.++++
T Consensus 122 ~gd~vl~~~~~~~~~~~-~~~~~g~~~~~v~~~~~-~~~-------------d~~~l~~~i~~~--~~~~v~~~~~~npt 184 (397)
T 3f9t_A 122 EHPKIIVPITAHFSFEK-GREMMDLEYIYAPIKED-YTI-------------DEKFVKDAVEDY--DVDGIIGIAGTTEL 184 (397)
T ss_dssp SSCEEEEETTCCTHHHH-HHHHHTCEEEEECBCTT-SSB-------------CHHHHHHHHHHS--CCCEEEEEBSCTTT
T ss_pred CCeEEEECCcchhHHHH-HHHHcCceeEEEeeCCC-CcC-------------CHHHHHHHHhhc--CCeEEEEECCCCCC
Confidence 47888888888776433 33333443322221111 111 899999999853 56667766667778
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h--ccc---------CccccccCCCcchhhhhhhccCCccceeeee
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R--LAY---------GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGG 221 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~---------~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~ 221 (368)
|.+.+ +++|.++|++||+++|+||+|+++ . .+. .+.... +.+..+.+++|.+++|.|+|++++
T Consensus 185 G~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~ 259 (397)
T 3f9t_A 185 GTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILF 259 (397)
T ss_dssp CCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEE
T ss_pred CCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEE
Confidence 88877 999999999999999999999765 2 221 222333 555556788999888889999977
Q ss_pred hH-HHHHHhcCCCCccc--------cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 017633 222 RR-DIMEMVAPAGPMYQ--------AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG 292 (368)
Q Consensus 222 ~~-~~~~~~~~~~~~~~--------~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 292 (368)
++ .+.+.+.....+.. +.+.+.+.+++.++...+....-+...+++.++++++++.|++. +......
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~ 335 (397)
T 3f9t_A 260 KDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN----NFKPVIE 335 (397)
T ss_dssp SSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCBSSC
T ss_pred eCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC----CCEEEcC
Confidence 54 45554432111111 11112234455554444432111334556666666666666654 3322223
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-Ccccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
..++++++.+. + ..++.+.|.++||.+.++.. ..+|+ ...++++++++++++|++++.
T Consensus 336 ~~~~~~~~~~~-------------~---~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 336 PILNIVAIEDE-------------D---YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CSSSEEEEECT-------------T---HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred CCccEEEEEeC-------------C---HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 44566666541 1 47889999999999998864 34555 445799999999999999875
No 115
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=4.9e-28 Score=221.15 Aligned_cols=322 Identities=13% Similarity=0.066 Sum_probs=214.7
Q ss_pred ccCCCcHHHHHHHHHHHHcCCC---C---CCCC--hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCc
Q 017633 6 ILFPSYLQVLAALGETMKKGTS---F---GAPC--LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRE 76 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~---~---~~~~--~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~ 76 (368)
.+|+.++++++++.+++..... + .++. +...++++.++++++ +.+++++++||++|++.+++.++ ..+++
T Consensus 24 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~-~~~gd 102 (390)
T 1elu_A 24 GQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLD-WHQGD 102 (390)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSC-CCTTC
T ss_pred ccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCC-CCCCC
Confidence 4567788999999998875321 1 2232 678899999999998 66799999999999999998662 24678
Q ss_pred eEEEEcCCCCCCchhh---hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 77 RIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 77 ~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
.|++..++|++..... ....|..+...+....... ..|++++++.++ ++++++++++.++++
T Consensus 103 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~i~---~~~~~v~~~~~~npt 167 (390)
T 1elu_A 103 EILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQ------------GDAAAVLANHLG---PKTRLVILSHLLWNT 167 (390)
T ss_dssp EEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSS------------SCHHHHHHTTCC---TTEEEEEEESBCTTT
T ss_pred EEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCc------------cchHHHHHHhcC---CCceEEEEeccccCC
Confidence 9999999998865432 2223433322211100000 017889988886 468888888888888
Q ss_pred CcccCCHHHHHHHHHHHH----HhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITK----ENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIME 227 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~----~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~ 227 (368)
|.+.+ +++|.++|+ +||+++|+||+|+.... ..... ...+|++ |+||++.+|.++|++++++++++
T Consensus 168 G~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~~g~~--~~~~~--~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~ 239 (390)
T 1elu_A 168 GQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL--PLDFS--RLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLG 239 (390)
T ss_dssp CCBCC----HHHHHHHHHHCCSSSCCEEEEECTTTBTTB--CCCTT--TSCCSEEEEESSSTTCCCTTCEEEEECTTTGG
T ss_pred ceecC----HHHHHHHHhhhhhhcCcEEEEEcccccCCc--CCChh--hcCCCEEEccccccccCCCceEEEEECHHhHh
Confidence 98888 999999999 99999999999962111 11112 2234554 58997777888999999988877
Q ss_pred HhcCCCCc-------------------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 017633 228 MVAPAGPM-------------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GH 287 (368)
Q Consensus 228 ~~~~~~~~-------------------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~ 287 (368)
.+...... ......+.+.++++++.++++.+.+.++.+.+.++.+..++.+.+.+.+. +.
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 319 (390)
T 1elu_A 240 EINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHV 319 (390)
T ss_dssp GCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred hcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 76532100 01123356778888887888877554433344444444444444443333 22
Q ss_pred ceEE--eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-CCccccc--cCCCHHHHHHHHHHHH
Q 017633 288 AICG--GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTS--LAHSSDDIQHTITAAE 362 (368)
Q Consensus 288 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~~~~~--~~~~~~~i~~~~~~l~ 362 (368)
.... ...++++.+.+.. ..+..++.+.|.++||.+.++. ...+|++ ...+++++++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 386 (390)
T 1elu_A 320 HCLATSAPQAGLVSFTVDS-------------PLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLA 386 (390)
T ss_dssp EESCSSCCSSSEEEEEECS-------------SSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHT
T ss_pred EEecCccccccEEEEEcCC-------------CCCHHHHHHHHHHCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHH
Confidence 1111 2356677776521 1124678999999999999875 3455654 5689999999999987
Q ss_pred HH
Q 017633 363 KV 364 (368)
Q Consensus 363 ~~ 364 (368)
++
T Consensus 387 ~~ 388 (390)
T 1elu_A 387 DF 388 (390)
T ss_dssp TC
T ss_pred hh
Confidence 53
No 116
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.95 E-value=5.7e-28 Score=222.48 Aligned_cols=315 Identities=13% Similarity=0.083 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC-C--CCC---eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV-P--SIE---MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~--~~~---~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
+.+.+++.+........+.+.....++++.+++++ + +.+ ++++|+||++|+..+++.+ ..++|.|++..++|
T Consensus 58 ~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~--~~~gd~Vl~~~p~~ 135 (413)
T 3t18_A 58 PSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSY--LDEGDPLICHDYYW 135 (413)
T ss_dssp HHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH--CCSSCEEEEESSCC
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHh--cCCCCEEEECCCCc
Confidence 46777776533221112223334456666666644 1 244 9999999999999999866 35678999999888
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC--CCCeEEEEEccc-CCCCCcccCCHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIAAIILEPV-VGNSGFIAPKPDF 162 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~--~~~~~~~~~~~~-~~~~g~~~~~~~~ 162 (368)
+++.... ...|..+...++....+.. |++++++.+++. ++..+++++++. +|++|.+.+.++
T Consensus 136 ~~~~~~~-~~~g~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~- 200 (413)
T 3t18_A 136 APYRKIC-EEFGRNFKTFEFFTDDFAF-------------NIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEE- 200 (413)
T ss_dssp THHHHHH-HHHTCEEEEECCBCTTSSB-------------CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHH-
T ss_pred ccHHHHH-HHhCCeEEEeeccCCCCCc-------------CHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHH-
Confidence 7754433 3344433322221111111 899999999741 123436666544 566776665444
Q ss_pred HHHHHHHHH------HhCCEEEEehhhhch-hcccC--cccc-ccCCCcc---h--hhhhhhcc-CCccceeeee---hH
Q 017633 163 LNAIRRITK------ENGALLIFDEVMTGF-RLAYG--GAQE-YFGVTPD---L--TTLGKIIG-GGLPVGAYGG---RR 223 (368)
Q Consensus 163 l~~i~~l~~------~~~~~li~De~~~~~-~~g~~--~~~~-~~~~~~d---i--~s~sK~~~-~G~~iG~v~~---~~ 223 (368)
+++|+++|+ +||++||+||+|.+| +.+.. .... ..++.++ + .||||.++ +|+|+||+++ ++
T Consensus 201 l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~ 280 (413)
T 3t18_A 201 WDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSK 280 (413)
T ss_dssp HHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCH
T ss_pred HHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCH
Confidence 999999999 899999999999988 55432 1112 2233333 2 38999999 8999999988 88
Q ss_pred HHHHHhcCCCCcccc-ccCCCCHHHHHHHHHHHHHHc-----c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 224 DIMEMVAPAGPMYQA-GTLSGNPLAMTAGIHTLKRLK-----E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 224 ~~~~~~~~~~~~~~~-~t~~~~~~~~~a~~~~l~~~~-----~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
++++.+......... .+.+.+.+++.++.++++... + +.+.++++++++.+.+.|++ .++....+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~~ 356 (413)
T 3t18_A 281 EIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE----NKLTMIPYFGG 356 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCBCCCSS
T ss_pred HHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCccCCCce
Confidence 888877632111111 223578888888776664221 0 12334455555555555544 34333333344
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
.++|+.+. +..++++.|.++||.+.++. ..+|+++. .+++++ +++|++++++
T Consensus 357 ~~~~~~~~----------------~~~~~~~~l~~~gv~v~~g~-~~iRis~~~~~~~~~---l~~l~~~l~~ 409 (413)
T 3t18_A 357 FFTFIPTD----------------KAFDIVKDLEKENIFTIPSA-KGIRVAICGVGEEKI---PKLVQRLAFY 409 (413)
T ss_dssp SCEEEECS----------------CHHHHHHHHHHTTEECEECS-SEEEECTTTSCGGGH---HHHHHHHHHH
T ss_pred EEEEeCCC----------------CHHHHHHHHHhCCEEEecCC-CceEEEEeeCCHHHH---HHHHHHHHHH
Confidence 45555431 24678888999999999974 34666544 355555 6777766643
No 117
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=4.9e-27 Score=214.74 Aligned_cols=319 Identities=13% Similarity=0.092 Sum_probs=213.2
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 7 LFPSYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
.++.+|++++++.+++.. ..+ ...+...+++++++++++ +.+++++++||++|+..+++.+ ..+++.|++..++
T Consensus 17 ~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~--~~~gd~Vl~~~~~ 92 (392)
T 2z9v_A 17 PVNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASL--ISPDDVVLNLASG 92 (392)
T ss_dssp CCCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHH--CCTTCCEEEEESS
T ss_pred CcCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHh--cCCCCEEEEecCC
Confidence 345778899988776653 222 123457899999999998 5689999999999999999876 4567889999988
Q ss_pred CCCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 85 YHGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
|++.... .....|..+....... .+. .|++++++.+++. ++++++++++.++++|.+.+ +
T Consensus 93 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l 153 (392)
T 2z9v_A 93 VYGKGFGYWAKRYSPHLLEIEVPY-NEA-------------IDPQAVADMLKAH-PEITVVSVCHHDTPSGTINP----I 153 (392)
T ss_dssp HHHHHHHHHHHHHCSCEEEEECCT-TSC-------------CCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECC----H
T ss_pred cccHHHHHHHHHcCCceEEeeCCC-CCC-------------CCHHHHHHHHhcC-CCCcEEEEeccCCCCceecc----H
Confidence 8875321 1122344332222211 111 1899999999643 35677888887788888888 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC-----C----
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG-----P---- 234 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~-----~---- 234 (368)
++|.++|++||+++|+||+|+.-. .......++.+.-+.|+||+++++.++|++++++++++.+.... .
T Consensus 154 ~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 231 (392)
T 2z9v_A 154 DAIGALVSAHGAYLIVDAVSSFGG--MKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSI 231 (392)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTT--BSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCS
T ss_pred HHHHHHHHHcCCeEEEEcccccCC--cccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccH
Confidence 999999999999999999996211 11222333332234567898886667799999998887764311 0
Q ss_pred --------ccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEE-e---eccceEE
Q 017633 235 --------MYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICG-G---YISGMFG 299 (368)
Q Consensus 235 --------~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~---~~~~~~~ 299 (368)
.......+.+..+++++.++++.+.+. .+.++++++++++++.|+++ +..... . ..+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~ 307 (392)
T 2z9v_A 232 VDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM----GLSVWAASDSIASPTTTA 307 (392)
T ss_dssp GGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSSSSGGGBCTTEEE
T ss_pred HHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc----CCeeccCCccccCCceEE
Confidence 001123345677777777777766443 34566677777777777663 322111 1 1355666
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC----CCcccccc---CCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTSL---AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~----~~~~~~~~---~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+. +..+..++.+.|.++ ||.+.++. ...+|++. .++++++++++++|++++++
T Consensus 308 ~~~~-------------~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 308 VRTP-------------DGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp EECC-------------TTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EECC-------------CCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 6652 112246899999998 99998864 23456653 57999999999999998865
No 118
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.95 E-value=1.8e-27 Score=219.05 Aligned_cols=319 Identities=13% Similarity=0.040 Sum_probs=199.0
Q ss_pred CcHHHHHHHHH-HHHcCCCC-CCCChhHHHHHHHHHhhCC-------CCCeEEE--eCChHHHHHHHHHHHHHhcCCceE
Q 017633 10 SYLQVLAALGE-TMKKGTSF-GAPCLLENVLAEMVISAVP-------SIEMVRF--VNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 10 ~~~~v~~a~~~-~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+|.+++++.+ .+.....+ +.+.....++++.+++++. .++++++ |+||++|++.+++++....+++.|
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~V 127 (412)
T 1yaa_A 48 VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLV 127 (412)
T ss_dssp CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEE
Confidence 44789999988 77532222 2244556778888887762 2679999 999999999997555444577899
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
++..++|++....+.. .|..+...+. ...... .|++++++.++++++.++++++...++++|.+.
T Consensus 128 l~~~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~-------------~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~ 193 (412)
T 1yaa_A 128 YLSKPTWANHMAIFEN-QGLKTATYPYWANETKS-------------LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDP 193 (412)
T ss_dssp EEEESCCTTHHHHHHT-TTCCEEEEECEETTTTE-------------ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCC
T ss_pred EEeCCCCccHHHHHHH-cCceEEEEeeecCCCCc-------------cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC
Confidence 9999999986543333 3333222111 000111 179999999986433355555455555566554
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcc---cCccc---cccC----CCcchhhhhhhccC-Cccceeee--e--
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLA---YGGAQ---EYFG----VTPDLTTLGKIIGG-GLPVGAYG--G-- 221 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g---~~~~~---~~~~----~~~di~s~sK~~~~-G~~iG~v~--~-- 221 (368)
+.+.+++|+++|++||+++|+||+|.++ +.+ ..... ...+ ....+.|+||.+++ |+|+||++ +
T Consensus 194 -~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~ 272 (412)
T 1yaa_A 194 -TSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTK 272 (412)
T ss_dssp -CHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCS
T ss_pred -CHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecC
Confidence 4555999999999999999999999887 433 22112 1111 12235689999995 99999998 7
Q ss_pred ---hHH----HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 017633 222 ---RRD----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--------EPGTYEYLNKITGELTQGIIDAGKKAG 286 (368)
Q Consensus 222 ---~~~----~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~~~ 286 (368)
+++ +++.+.. .....+.+++.+++.++.++++... -+.+.++++++++++.+.|++.....+
T Consensus 273 ~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 349 (412)
T 1yaa_A 273 QAQNKTIKPAVTSQLAK---IIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGN 349 (412)
T ss_dssp CTTHHHHHHHHHHHHHH---HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred CCCCHHHHHHHHHHHHH---HHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 666 6666652 1223344558888888888876431 022344555555555555555321001
Q ss_pred CceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHH
Q 017633 287 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVL 365 (368)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l 365 (368)
+....+..+.+.|..+ + ...+...+.++||.+.+ .+|+++. .+++++++++++|++++
T Consensus 350 ~~~~~~~~~~~~~~~~--------------~---~~~~~~~l~~~gi~v~~----~~Ris~~~~~~~~i~~~~~~l~~~~ 408 (412)
T 1yaa_A 350 WDHIVNQCGMFSFTGL--------------T---PQMVKRLEETHAVYLVA----SGRASIAGLNQGNVEYVAKAIDEVV 408 (412)
T ss_dssp CTHHHHCCSSEEECCC--------------C---HHHHHHHHHHHCEECCT----TSEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred eeeeccCceEEEeeCC--------------C---HHHHHHHHHhCCEEecc----CcEEEEccCCHhHHHHHHHHHHHHH
Confidence 2222222333434321 1 23454445578999997 3455444 48999999999999988
Q ss_pred hh
Q 017633 366 RQ 367 (368)
Q Consensus 366 ~~ 367 (368)
+.
T Consensus 409 ~~ 410 (412)
T 1yaa_A 409 RF 410 (412)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 119
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.95 E-value=2.3e-26 Score=211.84 Aligned_cols=324 Identities=13% Similarity=0.058 Sum_probs=213.0
Q ss_pred ceeccCCCcHHHHHHHHHHHHcCCCCCCC---ChhHHHHHHHHHhhCC-CCCeEE-EeCChHHHHHHHHHHHHHhcCCce
Q 017633 3 QLIILFPSYLQVLAALGETMKKGTSFGAP---CLLENVLAEMVISAVP-SIEMVR-FVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 3 ~~~~~g~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~~-~~~~v~-~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
...+++++++.+.+++.+++.+.....++ .+...+++++++++++ +.+.++ +++||++|+..+++.+ ..+++.
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l--~~~gd~ 88 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASV--IEPEDD 88 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHH--CCTTCE
T ss_pred cceeecCCCcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHh--cCCCCE
Confidence 34567877777777777776653222222 3457899999999998 555555 8999999999999766 467889
Q ss_pred EEEEcCCCCCCch-hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 78 IIKFEGCYHGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 78 vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
|++.+++|++... ......|..+...+......+ |++++++++++. +++++++++.++++|..
T Consensus 89 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~i~~~--~~~~v~~~~~~nptG~~ 152 (416)
T 3isl_A 89 VLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVF--------------DPEDIIREIKKV--KPKIVAMVHGETSTGRI 152 (416)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCC--------------CHHHHHHHHHHH--CCSEEEEESEETTTTEE
T ss_pred EEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCC--------------CHHHHHHHHhhC--CCcEEEEEccCCCCcee
Confidence 9999999887332 233333443332222111111 899999999842 56788888888888888
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC---
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG--- 233 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~--- 233 (368)
.+ +++|.++|++||+++|+||+|+.. ........++.+..+.+++|++.++.++|++++++++++.+....
T Consensus 153 ~~----l~~i~~l~~~~~~~li~D~a~~~~--~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~ 226 (416)
T 3isl_A 153 HP----LKAIGEACRTEDALFIVDAVATIG--GCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVE 226 (416)
T ss_dssp CC----CHHHHHHHHHTTCEEEEECTTTTT--TSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC----
T ss_pred cC----HHHHHHHHHHcCCEEEEECCcccc--CCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhcccccc
Confidence 88 999999999999999999999621 111222333433334567799887778999999998887765321
Q ss_pred --------------------------------CccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHH
Q 017633 234 --------------------------------PMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGI 278 (368)
Q Consensus 234 --------------------------------~~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l 278 (368)
........+.+..++.++.++++.+.+. ++.+++.++++++++.|
T Consensus 227 ~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (416)
T 3isl_A 227 RGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGI 306 (416)
T ss_dssp --------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 0001123355777888877888766543 35566666666666666
Q ss_pred HHHHHhcCCceEEe---eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC----CCcccccc---
Q 017633 279 IDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTSL--- 347 (368)
Q Consensus 279 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~----~~~~~~~~--- 347 (368)
++. +...... ..+.++++.+. +..+..++.+.|+++ ||.+.++. ...+|+++
T Consensus 307 ~~~----g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~ 369 (416)
T 3isl_A 307 KAM----GLRLFGDDSCKMPVVTCVEIP-------------GGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGY 369 (416)
T ss_dssp HHT----TCCBCSCGGGBCTTEEEEECC-------------TTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGG
T ss_pred HHc----CCEeccCccccCCcEEEEeCC-------------CCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccC
Confidence 663 3221111 12456666552 122357899999887 99999763 22345543
Q ss_pred CCCHHHHHHHHHHHHHHHhh
Q 017633 348 AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 348 ~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++++++++++|++++.+
T Consensus 370 ~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 370 SCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp GCSHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHH
Confidence 33444499999999998865
No 120
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=5.8e-26 Score=208.47 Aligned_cols=316 Identities=14% Similarity=0.115 Sum_probs=209.5
Q ss_pred CCCcHHHHHHHHHHHHcCC---CCC------CCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHH--hcC
Q 017633 8 FPSYLQVLAALGETMKKGT---SFG------APCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARA--FTG 74 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~---~~~------~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~--~~~ 74 (368)
++.+|++++++.+++.+.. ..+ .+.+...+++++++++++. .+++++++||++|+..+++.++. ..+
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~ 112 (406)
T 1kmj_A 33 AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRA 112 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCT
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCC
Confidence 4578899999999987632 111 1346678999999999974 68999999999999999987642 356
Q ss_pred CceEEEEcCCCCCCchhh---hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
++.|++..++||+..... ....|..+...+... .+. .|+++++++++ ++++++++++.++
T Consensus 113 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-------------~d~~~l~~~l~---~~~~~v~~~~~~n 175 (406)
T 1kmj_A 113 GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP-DGT-------------LQLETLPTLFD---EKTRLLAITHVSN 175 (406)
T ss_dssp TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT-TSC-------------BCGGGHHHHCC---TTEEEEEEESBCT
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC-CCC-------------cCHHHHHHHhc---cCCeEEEEeCCCc
Confidence 789999999998865432 222343332221111 111 17899999887 4688899988888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHHHh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMV 229 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~ 229 (368)
++|.+.+ +++|+++|++||+++|+||+|+.... ......++ +|+ .|+||.+++ .++|++++++++++.+
T Consensus 176 ptG~~~~----l~~i~~l~~~~~~~li~D~~~~~g~~--~~~~~~~~--~d~~~~s~~K~~g~-~G~G~~~~~~~~~~~~ 246 (406)
T 1kmj_A 176 VLGTENP----LAEMITLAHQHGAKVLVDGAQAVMHH--PVDVQALD--CDFYVFSGHKLYGP-TGIGILYVKEALLQEM 246 (406)
T ss_dssp TTCCBCC----HHHHHHHHHHTTCEEEEECTTTTTTS--CCCHHHHT--CSEEEEEGGGTTSC-TTCEEEEECHHHHHHC
T ss_pred cccCcCC----HHHHHHHHHHcCCEEEEEchhhcCCC--CCcccccC--CCEEEEEchhccCC-CCcEEEEEeHHHHhhc
Confidence 8898888 99999999999999999999974211 11222233 454 579999962 2389999999998887
Q ss_pred cCCCCcc------------------ccccCCCCHHHHHHHH-HHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 230 APAGPMY------------------QAGTLSGNPLAMTAGI-HTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 230 ~~~~~~~------------------~~~t~~~~~~~~~a~~-~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
....... .....+.+.+.+.+++ ++++.+.+. .+.++++++++++++.|++ .+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~ 322 (406)
T 1kmj_A 247 PPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES----VPD 322 (406)
T ss_dssp CCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT----STT
T ss_pred CCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc----CCC
Confidence 6422100 0111234555555554 677766432 2344444555555554443 321
Q ss_pred ceEEee--ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC------------CCcccc--ccCCCH
Q 017633 288 AICGGY--ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFT--SLAHSS 351 (368)
Q Consensus 288 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------~~~~~~--~~~~~~ 351 (368)
...... .++++.+.+. ..+..++.+.|.++||.+.++. ...+|+ ...+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~ 388 (406)
T 1kmj_A 323 LTLYGPQNRLGVIAFNLG--------------KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH 388 (406)
T ss_dssp EEEESCTTCCSEEEEEET--------------TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCH
T ss_pred eEEecCCCcCCEEEEEEC--------------CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCH
Confidence 122233 4666666542 1124678889999999998764 133454 344599
Q ss_pred HHHHHHHHHHHHHHhh
Q 017633 352 DDIQHTITAAEKVLRQ 367 (368)
Q Consensus 352 ~~i~~~~~~l~~~l~~ 367 (368)
+|+++++++|+++++.
T Consensus 389 ~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 389 EEVDRLVTGLQRIHRL 404 (406)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 121
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=4e-26 Score=207.93 Aligned_cols=317 Identities=17% Similarity=0.172 Sum_probs=207.8
Q ss_pred cCCCcHHHHHHHHHHHHcCCCC--------CCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH--hcCC
Q 017633 7 LFPSYLQVLAALGETMKKGTSF--------GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA--FTGR 75 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~--------~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~--~~~~ 75 (368)
.++.+|++++++.+++.+.... +.+.+...+++++++++++ +.+++++++||++|+..+++.+.. ..++
T Consensus 10 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~g 89 (384)
T 1eg5_A 10 TTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRK 89 (384)
T ss_dssp CCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTC
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCC
Confidence 4578999999999998752110 0123456889999999997 567999999999999999987752 1467
Q ss_pred ceEEEEcCCCCCCchhhh--hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFL--VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+.|++..++|++...... ...|..+...+... .+. .|+++|++.++ ++++++++++.++++
T Consensus 90 d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~i~---~~~~~v~~~~~~npt 152 (384)
T 1eg5_A 90 RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS-RGV-------------VKLEELEKLVD---EDTFLVSIMAANNEV 152 (384)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT-TSC-------------BCHHHHHHHCC---TTEEEEEEESBCTTT
T ss_pred CEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC-CCc-------------cCHHHHHHHhC---CCCeEEEEECCCCCc
Confidence 899999988887544332 23343332211111 111 18999999987 368888888888888
Q ss_pred CcccCCHHHHHHHHHHHHHhC--CEEEEehhhhchhcccCccccccCCCcchh--hhhhhcc-CCccceeeeehHHH--H
Q 017633 154 GFIAPKPDFLNAIRRITKENG--ALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPVGAYGGRRDI--M 226 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~--~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~-~G~~iG~v~~~~~~--~ 226 (368)
|.+.+ +++|.++|++|| +++|+||+|+ + .........+ .+|++ ++||.++ +| +||+++++++ .
T Consensus 153 G~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~-~~~~~~~~~~--~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~ 222 (384)
T 1eg5_A 153 GTIQP----VEDVTRIVKKKNKETLVHVDAVQT-I-GKIPFSLEKL--EVDYASFSAHKFHGPKG--VGITYIRKGVPIR 222 (384)
T ss_dssp CBBCC----HHHHHHHHHHHCTTCEEEEECTTT-T-TTSCCCCTTT--CCSEEEEEGGGGTSCTT--CEEEEECTTSCCC
T ss_pred ccccC----HHHHHHHHHhcCCceEEEEEhhhh-c-CCcccCchhc--CCCEEEecHHHhcCCCc--eEEEEEcCCCccc
Confidence 98888 999999999999 9999999996 3 1111222223 34554 6779877 35 7999988765 2
Q ss_pred HHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEEEE
Q 017633 227 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFF 301 (368)
Q Consensus 227 ~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~ 301 (368)
..+...+......+++.+.+++.++.++++.+.+ +++.++++++++++.+.|++ .++....+ ..+.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~ 298 (384)
T 1eg5_A 223 PLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN----LGAHIITPLEISLPNTLSVS 298 (384)
T ss_dssp CSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT----TTCEECSCTTSBCTTEEEEE
T ss_pred cccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC----CCeEEeCCcccCCCCEEEEE
Confidence 2222111001124557788999888888886532 23445555555555555544 23321111 123455554
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------CccccccC--CCHHHHHH
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFTSLA--HSSDDIQH 356 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~~~~~--~~~~~i~~ 356 (368)
+. ..+..++.+.|.++||.+.++.. ..+|+++. ++++|+++
T Consensus 299 ~~--------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~ 364 (384)
T 1eg5_A 299 FP--------------NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDY 364 (384)
T ss_dssp CT--------------TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHH
T ss_pred eC--------------CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHH
Confidence 41 11246788999999999998531 23455544 79999999
Q ss_pred HHHHHHHHHhhC
Q 017633 357 TITAAEKVLRQI 368 (368)
Q Consensus 357 ~~~~l~~~l~~~ 368 (368)
++++|+++++++
T Consensus 365 ~~~~l~~~~~~~ 376 (384)
T 1eg5_A 365 FLKKIEEILSFL 376 (384)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999998653
No 122
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=2e-27 Score=217.33 Aligned_cols=315 Identities=10% Similarity=0.039 Sum_probs=207.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCC--CChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGA--PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
.+|++++++.+++. .+.. ..+...+++++++++++ . .+++++++||++|++.+++.+ ..+++.|++...+|
T Consensus 34 ~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~--~~~gd~vl~~~~~~ 108 (393)
T 3kgw_A 34 LAPRVLAAGSLRMI---GHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNL--LEPGDSFLTGTNGI 108 (393)
T ss_dssp CCHHHHHHTTCCCC---CTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHH--CCTTCEEEEEESSH
T ss_pred CCHHHHHHhccccc---CcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhc--CCCCCEEEEEeCCc
Confidence 35566666655322 1221 23567789999999987 3 346999999999999999877 46788999988777
Q ss_pred CCCc-hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 86 HGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
++.. .......|..+...+...... .|++++++.++++ +++++++++.++++|.+.+ ++
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~ 168 (393)
T 3kgw_A 109 WGMRAAEIADRIGARVHQMIKKPGEH--------------YTLQEVEEGLAQH--KPVLLFLVHGESSTGVVQP----LD 168 (393)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTCC--------------CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CT
T ss_pred hhHHHHHHHHHcCCceEEEeCCCCCC--------------CCHHHHHHHHhhC--CCcEEEEeccCCcchhhcc----HH
Confidence 6432 222333344332222211111 1899999999852 5777788888888888888 89
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCcc--------
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY-------- 236 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~-------- 236 (368)
+|.++|++||++||+||+|+.. +..+..+.++.+..+.++||+++++.++|++++++++++.+.......
T Consensus 169 ~i~~l~~~~~~~li~De~~~~g--~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
T 3kgw_A 169 GFGELCHRYQCLLLVDSVASLG--GVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDIT 246 (393)
T ss_dssp THHHHHHHTTCEEEEECTTTTT--TSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred HHHHHHHHcCCEEEEECCcccc--CcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence 9999999999999999999611 112223334443334566799987778999999999888775322100
Q ss_pred ------------ccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceE----Eeeccce
Q 017633 237 ------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAIC----GGYISGM 297 (368)
Q Consensus 237 ------------~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~ 297 (368)
...+.+.+..+++++.++++.+.+ +++.+++.++++++++.|++. +.... ....+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~ 322 (393)
T 3kgw_A 247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM----GLKFFVKDPEIRLPTI 322 (393)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSSSSGGGBCSSE
T ss_pred HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----CCeeccCChhhcCCeE
Confidence 112345678888888888887654 334566666666776666664 32211 1112344
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC----Ccccccc---CCCHHHHHHHHHHHHHHHhhC
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSL---AHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~----~~~~~~~---~~~~~~i~~~~~~l~~~l~~~ 368 (368)
.++.+. +..+..++.+.|+++ ||.+.++.. ..+|++. .++++++++++++|+++++++
T Consensus 323 ~~~~~~-------------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 323 TTVTVP-------------AGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp EEEECC-------------TTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCC-------------CCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 455542 222357899999988 999998642 2345543 359999999999999998653
No 123
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.92 E-value=3.5e-30 Score=235.65 Aligned_cols=320 Identities=11% Similarity=0.044 Sum_probs=203.9
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.+++.... ++++.. ..++++.+++++ + +.+++++++||++|+..+++.+. .+++.|++..
T Consensus 45 ~~~~v~~a~~~~~~~~~-~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~--~~gd~vl~~~ 120 (392)
T 3b1d_A 45 VMPEVKQAIHDYAEQLV-YGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT--KEGEAVLINS 120 (392)
Confidence 46789999988876522 223332 556666666654 2 36799999999999999998763 4568899999
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
++|++........ +..+.........+ ... .|++++++.+++ ++++++++...++++|.+.+ .++
T Consensus 121 p~~~~~~~~~~~~-g~~~~~~~~~~~~g--------~~~---~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~-~~~ 185 (392)
T 3b1d_A 121 PVYPPFARSVRLN-NRKLVSNSLKEENG--------LFQ---IDFEQLENDIVE--NDVKLYLLCNPHNPGGRVWE-REV 185 (392)
Confidence 9999876443322 22221111100000 000 178888888863 25666666555556676554 445
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hccc----Cccccc--cCCCcchhhhhhhcc-CCccceeeeehH-HHHHHhcCCC
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAY----GGAQEY--FGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAG 233 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~----~~~~~~--~~~~~di~s~sK~~~-~G~~iG~v~~~~-~~~~~~~~~~ 233 (368)
+++|+++|++||+++|+||+|+++ +.+. ...... .+..+++.|+||.++ +|+|+||+++++ ++++.+....
T Consensus 186 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 265 (392)
T 3b1d_A 186 LEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQ 265 (392)
Confidence 999999999999999999999988 5442 112212 344566789999999 899999998864 4887776422
Q ss_pred Ccccccc-CCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-eEEEEeecCCCcc
Q 017633 234 PMYQAGT-LSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYN 309 (368)
Q Consensus 234 ~~~~~~t-~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 309 (368)
...+ .+.++++++++.++++...+ +.+.+++.++++.+.+.|++... +.. ...+.++ ++|+.+..
T Consensus 266 ---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~~~~~~~~~~i~~~~----- 334 (392)
T 3b1d_A 266 ---LVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAP--RLK-VMKPQGTYLIWLDFSD----- 334 (392)
Confidence 2222 24578888888888763211 22333444444444444443111 222 2233333 44555521
Q ss_pred cchhcccccHHHHHHHHHHH-HcCeeecCCC------CCccccccCCCHHHHHHHHHHHHHHHh
Q 017633 310 FEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...+..++++.|+ ++||.+.++. ...+|+++..+++++++++++|++++.
T Consensus 335 -------~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 335 -------YGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 0123467888897 7899999863 234677777789999999999998875
No 124
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=1.3e-26 Score=210.76 Aligned_cols=315 Identities=13% Similarity=0.074 Sum_probs=206.5
Q ss_pred cHHHHHHHHHHHHcCCCCCCC--ChhHHHHHHHHHhhCC-CC--CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 11 YLQVLAALGETMKKGTSFGAP--CLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~-~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
+|++++++.+++.. +.++ .+...++++++++.++ +. +.+++++||++|++.+++.+ ..++|.|++..++|
T Consensus 31 ~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~--~~~gd~vi~~~~~~ 105 (376)
T 3f0h_A 31 SEEVRAIGAEQVPY---FRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNC--FTKKDKVLVIDGGS 105 (376)
T ss_dssp CHHHHHHHTSCCCC---CSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHH--CCTTCCEEEEESSH
T ss_pred cHHHHHHhcCCCCC---CCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhc--cCCCCeEEEEeCCh
Confidence 56777777654422 2222 2566788889999876 32 45566999999999999876 35678899998878
Q ss_pred CCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 86 HGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
++.... .....+..+.....+....+ |+++++++++ ++++++++++.++++|.+.+ ++
T Consensus 106 ~~~~~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~ 164 (376)
T 3f0h_A 106 FGHRFVQLCEIHEIPYVALKLEHGKKL--------------TKEKLYEYDN---QNFTGLLVNVDETSTAVLYD----TM 164 (376)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTCCC--------------CHHHHHTTTT---SCCCEEEEESEETTTTEECC----HH
T ss_pred hhHHHHHHHHHcCCceEEEeCCCCCCC--------------CHHHHHHhhc---cCceEEEEecccCCcceecC----HH
Confidence 774332 22223433322222211111 8999988765 46788888877788898888 99
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC--cc------
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--MY------ 236 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~--~~------ 236 (368)
+|+++|++||+++|+||+|+.. +..+..+.++.+..+.++||+++++.++|++++++++++.+..... ..
T Consensus 165 ~i~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
T 3f0h_A 165 MIGEFCKKNNMFFVCDCVSAFL--ADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDA 242 (376)
T ss_dssp HHHHHHHHTTCEEEEECTTTTT--TSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccc--CccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHH
Confidence 9999999999999999999743 1123344556655667889999866778999999998887763211 00
Q ss_pred ------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ccceEEEEeecCCCcc
Q 017633 237 ------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYN 309 (368)
Q Consensus 237 ------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (368)
....++.+..+++++.++++.+.+++..+.+.++.+.+++.+.+.+.+.+....... ...++.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~------- 315 (376)
T 3f0h_A 243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHP------- 315 (376)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEE-------
T ss_pred HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeC-------
Confidence 012345556566777778877755534556666666666666666555442211111 122222221
Q ss_pred cchhcccccHHHHHHHHHHHHc-CeeecCCC----CCccccc--cCCCHHHHHHHHHHHHHHHhh
Q 017633 310 FEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~----~~~~~~~--~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++.+.|+++ ||.++++. ...+|++ ..++++|+++++++|++++++
T Consensus 316 -------~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 316 -------TTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp -------SSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred -------CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 222357899999998 99998763 2345553 467999999999999998864
No 125
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=9.2e-26 Score=208.10 Aligned_cols=318 Identities=13% Similarity=0.112 Sum_probs=209.4
Q ss_pred CCCcHHHHHHHHHHHHcCC------CCCCC---ChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHH--hcC
Q 017633 8 FPSYLQVLAALGETMKKGT------SFGAP---CLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARA--FTG 74 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~------~~~~~---~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~--~~~ 74 (368)
++.++++++++.+++.+.. .+.++ .+...++++.++++++. .+++++++||++|++.+++.+.. ..+
T Consensus 38 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~ 117 (420)
T 1t3i_A 38 SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKA 117 (420)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCT
T ss_pred CCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCC
Confidence 3567899999999887631 11122 35678999999999974 58999999999999999987631 356
Q ss_pred CceEEEEcCCCCCCch---hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 75 RERIIKFEGCYHGHAD---PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
++.|++..++|++... ......|..+...... ..+. .|+++++++++ ++++++++++.++
T Consensus 118 gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~-------------~d~~~l~~~l~---~~~~~v~~~~~~n 180 (420)
T 1t3i_A 118 GDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD-EQES-------------FDLEHFKTLLS---EKTKLVTVVHISN 180 (420)
T ss_dssp TCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC-TTSS-------------BCHHHHHHHCC---TTEEEEEEESBCT
T ss_pred CCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC-CCCC-------------cCHHHHHHhhC---CCceEEEEeCCcc
Confidence 7899999999998642 2222334333221111 1110 18999999987 4688888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
++|.+.+ +++|.++|++||+++|+||+|+.... ......++.+.-+.|+||.+++ .++|++++++++++.+..
T Consensus 181 ptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~di~~~s~sK~~~~-~g~G~~~~~~~~~~~~~~ 253 (420)
T 1t3i_A 181 TLGCVNP----AEEIAQLAHQAGAKVLVDACQSAPHY--PLDVQLIDCDWLVASGHKMCAP-TGIGFLYGKEEILEAMPP 253 (420)
T ss_dssp TTCBBCC----HHHHHHHHHHTTCEEEEECTTTTTTS--CCCHHHHTCSEEEEEGGGTTSC-TTCEEEEECHHHHHHSCC
T ss_pred cccCcCC----HHHHHHHHHHcCCEEEEEhhhccCCc--cCchhhcCCCEEEEehhhhcCC-CceEEEEEchHHHhhcCc
Confidence 8898888 99999999999999999999973211 1122334432224467797653 349999999999888764
Q ss_pred CCCcc-----------------ccccCCCCHHHHHHHHH-HHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 017633 232 AGPMY-----------------QAGTLSGNPLAMTAGIH-TLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAI 289 (368)
Q Consensus 232 ~~~~~-----------------~~~t~~~~~~~~~a~~~-~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~ 289 (368)
..... ...+.+.+++.+.+++. +++.+.+ +.+.++++++++++++.|++ . +...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~ 329 (420)
T 1t3i_A 254 FFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ----IPQLRL 329 (420)
T ss_dssp CSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT----CTTEEE
T ss_pred eecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh----CCCeEE
Confidence 32110 01122445565555554 6776643 23445555555555555544 3 2221
Q ss_pred EEee-----ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC------------CCccccccC--CC
Q 017633 290 CGGY-----ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFTSLA--HS 350 (368)
Q Consensus 290 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------~~~~~~~~~--~~ 350 (368)
..+. .++++++.+.. .+..++.+.|.++||.+.++. ...+|+++. ++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~ 395 (420)
T 1t3i_A 330 YGPNPKHGDRAALASFNVAG--------------LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNT 395 (420)
T ss_dssp ESCCGGGSCBCSEEEEEETT--------------BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCC
T ss_pred eCCCccccccCCEEEEEECC--------------CCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCC
Confidence 1121 36666766521 124678889999999999872 334555444 59
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017633 351 SDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 351 ~~~i~~~~~~l~~~l~~ 367 (368)
++++++++++|++++++
T Consensus 396 ~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 396 KEEIDLFLQSLQATIRF 412 (420)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998865
No 126
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=1.8e-26 Score=208.89 Aligned_cols=315 Identities=15% Similarity=0.125 Sum_probs=208.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCC---hhHHHHHHHHHhhCCC---CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPC---LLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~---~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
.+|++++++.+++. +.++. +...+++++++++++. .+++++++||++|+..+++.+. .+++.|++.++
T Consensus 15 ~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~--~~gd~vi~~~~ 88 (366)
T 1m32_A 15 TSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL--GPQDKVLIVSN 88 (366)
T ss_dssp CCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC--CTTCCEEEEES
T ss_pred CCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc--CCCCeEEEEeC
Confidence 56788888866431 22221 6678999999999872 2479999999999999998763 45678888877
Q ss_pred CCCCCc-hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 84 CYHGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
.+|+.. .......|..+....... .+ ..|+++++++++++ .+++++++...++++|.+.+
T Consensus 89 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~---- 149 (366)
T 1m32_A 89 GAYGARMVEMAGLMGIAHHAYDCGE-VA-------------RPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNP---- 149 (366)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEECCT-TS-------------CCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----
T ss_pred CCccHHHHHHHHHhCCceEEEeCCC-CC-------------CCCHHHHHHHHhcC-CCeEEEEEecccCCcceecC----
Confidence 777642 233333344433222211 11 12899999999864 23566655555567788888
Q ss_pred HHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHHHhcCCCC-ccc--
Q 017633 163 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-MYQ-- 237 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~-~~~-- 237 (368)
+++|.++|++||+++|+||+|+.... ......+ .+|+ .|+||+++++.++|++++++++++.+..... +..
T Consensus 150 l~~i~~l~~~~~~~li~Dea~~~~~~--~~~~~~~--~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIVDAMSSFGGI--PMDIAAL--HIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDL 225 (366)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTS--CCCTTTT--TCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCH
T ss_pred HHHHHHHHHHcCCEEEEECCccccCc--Ccccccc--CccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccH
Confidence 99999999999999999999963211 1122222 3454 4788999766678999999988877764211 100
Q ss_pred ------------cccCCCCHHHHHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceE
Q 017633 238 ------------AGTLSGNPLAMTAGIHTLKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMF 298 (368)
Q Consensus 238 ------------~~t~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~ 298 (368)
...++.+..+++++.++++.+.+.+ +.++++++++++++.|++. +.....+ ..+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~ 301 (366)
T 1m32_A 226 YAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL----GFNTLLDDELHSPIIT 301 (366)
T ss_dssp HHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT----TCCBSSCGGGBCSSEE
T ss_pred HHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC----CCeeccCchhcCceEE
Confidence 0125778888888888888765433 4566666666666666653 3221111 234477
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC---CCccccc--cCCCHHHHHHHHHHHHHHHhhC
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~~~~~--~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
++.+... ...+..++.+.|.++||.+.++. ...+|++ ..++++++++++++|+++++++
T Consensus 302 ~~~~~~~-----------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 302 AFYSPED-----------PQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp EEECCCC-----------TTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred EEEcCcc-----------CCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7765310 01235789999999999998874 2345543 4468999999999999988653
No 127
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=6e-27 Score=213.41 Aligned_cols=314 Identities=15% Similarity=0.105 Sum_probs=208.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CC--CeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~--~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
.+|++++++.+++... ......+...+++++++++++ +. +++++++||++|+. ++..+ ..+++.|++.+++||
T Consensus 13 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~--~~~gd~vi~~~~~~~ 88 (384)
T 3zrp_A 13 IKEDVLVAGLENNVGF-TSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL--LKPNDKILVVSNGVF 88 (384)
T ss_dssp CCHHHHHHTTCCSCCT-TSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG--CCTTCEEEEECSSHH
T ss_pred CCHHHHHHhhcccccc-ccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh--cCCCCEEEEecCCcc
Confidence 4567777776654321 111224567889999999987 44 88999999999999 88655 457889999999988
Q ss_pred CCchhhh-hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 87 GHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 87 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
+.....+ ...|..+...+.... +. .|++++++.++++ +++++++++.++++|.+.+ +++
T Consensus 89 ~~~~~~~~~~~g~~~~~v~~~~~-~~-------------~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~ 148 (384)
T 3zrp_A 89 GDRWEQIFKRYPVNVKVLRPSPG-DY-------------VKPGEVEEEVRKS--EYKLVALTHVETSTGVREP----VKD 148 (384)
T ss_dssp HHHHHHHHTTSSCEEEEECCSTT-CC-------------CCHHHHHHHHHHS--CEEEEEEESEETTTTEECC----HHH
T ss_pred hHHHHHHHHHcCCcEEEecCCCC-CC-------------CCHHHHHHHHHhC--CCcEEEEeCCCCCCceECc----HHH
Confidence 7433222 223333322222111 11 1899999999853 5888888888888898888 999
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHh-cCCCC---------c
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMV-APAGP---------M 235 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~-~~~~~---------~ 235 (368)
|.++|++||+++|+||+|+... .......++.+..+.++||+++++.++|++++++++++.+ ..... .
T Consensus 149 i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (384)
T 3zrp_A 149 VINKIRKYVELIVVDGVSSVGA--EEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNW 226 (384)
T ss_dssp HHHHHGGGEEEEEEECTTTTTT--SCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHH
T ss_pred HHHHHHhcCCEEEEECcccccC--ccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHH
Confidence 9999999999999999996221 1122223333333457779998777899999999887776 21100 0
Q ss_pred c---------ccccC-CCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEe----eccceE
Q 017633 236 Y---------QAGTL-SGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGG----YISGMF 298 (368)
Q Consensus 236 ~---------~~~t~-~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----~~~~~~ 298 (368)
. ....+ +.+...+.++.++++.+.+. .+.++++++++++.+.|++. +...... ..+.++
T Consensus 227 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~ 302 (384)
T 3zrp_A 227 LPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL----GLEIVARRPESYSNTVT 302 (384)
T ss_dssp HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSCSSGGGBCSSEE
T ss_pred HHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC----CCeEccCcccccCccEE
Confidence 0 11122 45677777777788766543 35566666666666666654 3221111 134555
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC---Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.+. . .+..++.+.|.++||.+.++.. ..+|+ ...++++++++++++|++++++
T Consensus 303 ~~~~~-------------~-~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 303 GVILK-------------V-ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp EEECS-------------S-SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEECC-------------C-CCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHH
Confidence 66652 1 2357899999999999998752 23454 3457999999999999998864
No 128
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.95 E-value=2.1e-26 Score=207.30 Aligned_cols=302 Identities=15% Similarity=0.065 Sum_probs=200.1
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
++++ .+|++++++.+++.....| +.....+++++++++++ +++++++|+||++++..+++.+. ++.|++..+
T Consensus 25 ~~~~-~~~~v~~a~~~~~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~----gd~Vi~~~p 97 (350)
T 3fkd_A 25 WTDG-DKDHLEKHLVENLNCIRHY--PEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR----GSRSLIAIP 97 (350)
T ss_dssp CCCS-CCHHHHHHHHHTGGGGGSC--CCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT----TCEEEEEES
T ss_pred CCCC-CCHHHHHHHHHhHhHHhcC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC----CCEEEEeCC
Confidence 3444 7889999999887543333 33334799999999998 67899999999999999998762 789999999
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
+|++...... ..|..+. .++. ++.+.+. ++++++++++..+|++|.+.+
T Consensus 98 ~~~~~~~~~~-~~g~~~~-------------------~v~~~~~~~~~~------~~~~~~v~i~~p~nptG~~~~---- 147 (350)
T 3fkd_A 98 SFAEYEDACR-MYEHEVC-------------------FYPSNEDIGEAD------FSNMDFCWLCNPNNPDGRLLQ---- 147 (350)
T ss_dssp CCHHHHHHHH-HTTCEEE-------------------EEETTSCGGGSC------CTTCSEEEEESSCTTTCCCCC----
T ss_pred CcHHHHHHHH-HcCCeEE-------------------EEecCCccccCc------cCCCCEEEEeCCCCCcCCCCC----
Confidence 9887643333 2333222 1111 1111110 025566666555666777777
Q ss_pred HHHHHHHHHHhC-CEEEEehhhhch-hcccCc--cccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccc
Q 017633 163 LNAIRRITKENG-ALLIFDEVMTGF-RLAYGG--AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 163 l~~i~~l~~~~~-~~li~De~~~~~-~~g~~~--~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~ 237 (368)
++++.++++.++ .++|+||+|.++ ..+... ..+..+....+.|+||.++ +|+|+||+++++++++.+....
T Consensus 148 ~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---- 223 (350)
T 3fkd_A 148 RTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS---- 223 (350)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC----
T ss_pred HHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC----
Confidence 444445554443 499999999887 444321 1222333345678999999 8999999999999999887533
Q ss_pred cccCCCCHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 316 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (368)
.+++.+++++.++.++++.... .+..++..++++++.+.|++ .+.....+..+.++++.+..
T Consensus 224 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~------------ 286 (350)
T 3fkd_A 224 -TPWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNR----LDGVEVHPSGTTFFLLRLKK------------ 286 (350)
T ss_dssp -CTTCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHH----STTEEECCCSSSEEEEEESS------------
T ss_pred -CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEECCCCCcEEEEECCC------------
Confidence 3557889999998888874431 12233333556666665554 32222344556677766631
Q ss_pred ccHHHHHHHHHHHH-cCeeecCCCC------CccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 317 ETTKFARFYRGMLE-EGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 317 ~~~~~~~~~~~l~~-~Gi~~~~~~~------~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. +..++.+.|++ +||.+.++.. ..+|+++. +++++++++++|++++.+
T Consensus 287 -~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 287 -G-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp -S-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred -C-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 1 35789999999 8999998742 23556544 788999999999988754
No 129
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.95 E-value=4.7e-27 Score=210.28 Aligned_cols=294 Identities=11% Similarity=0.059 Sum_probs=191.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC----CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
.+|++++++.+++.....++++.....++++.++++++ +.+++++++||++++..+++.+ ++.|++. ++|
T Consensus 33 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-----gd~Vl~~-p~y 106 (335)
T 1uu1_A 33 FPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-----DRSVFFP-PTY 106 (335)
T ss_dssp CCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS-----SEEEECS-SSC
T ss_pred CCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh-----CCcEEEC-CCc
Confidence 68899999998873322223344447889999999886 4689999999999999999755 5789888 999
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEE-EcccCCCCCcccCCHHHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~ 164 (368)
++..... ...|..+... +..... .+ |++++ +++++++ ++| +|++|.+.+ .+
T Consensus 107 ~~~~~~~-~~~g~~~~~v--~~~~~~---------~~---d~~~l--------~~~~~v~l~~p-~nptG~~~~----~~ 158 (335)
T 1uu1_A 107 SCYRIFA-KAVGAKFLEV--PLTKDL---------RI---PEVNV--------GEGDVVFIPNP-NNPTGHVFE----RE 158 (335)
T ss_dssp HHHHHHH-HHHTCEEEEC--CCCTTS---------CC---CCCCC--------CTTEEEEEESS-CTTTCCCCC----HH
T ss_pred HHHHHHH-HHcCCeEEEe--ccCCCC---------CC---CHHHc--------CCCCEEEEeCC-CCCCCCCCC----HH
Confidence 8865433 3334333221 111110 01 34433 1456555 555 555677666 44
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCcc-ccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcCCCCccccccCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 242 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~-~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~ 242 (368)
++.++++.+| ++|+||+|+++..+.... .+..+....+.|+||.++ +|+|+||+++++++++.+.... .+++
T Consensus 159 ~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~-----~~~~ 232 (335)
T 1uu1_A 159 EIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR-----LPFN 232 (335)
T ss_dssp HHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS-----CTTC
T ss_pred HHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc-----CCCC
Confidence 5555555558 899999998772122111 222334455679999999 8999999999999888776321 3457
Q ss_pred CCHHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 243 GNPLAMTAGIHTLKRLK-EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 243 ~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
.|++++.++.++++... -+.+.++++++++++.+.|++. +.. ..+..++++|+.+. . .+.
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~~~~~~~~-------------~-~~~ 293 (335)
T 1uu1_A 233 VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM----GYR-ITDSRGNFVFVFME-------------K-EEK 293 (335)
T ss_dssp SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH----TCC-BCCCCSSEEEEECC-------------T-HHH
T ss_pred cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----CcE-EcCCCCeEEEEECC-------------C-CCH
Confidence 89999999888887421 0223445555555555555553 332 22344667776652 2 345
Q ss_pred HHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHH
Q 017633 322 ARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~ 364 (368)
.++.+.|.++||.+.+. ...+|+++. +++|+++++++|+++
T Consensus 294 ~~~~~~l~~~gi~v~~~-~~~iRis~~-~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 294 ERLLEHLRTKNVAVRSF-REGVRITIG-KREENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHHTEEEEEE-TTEEEEECC-CHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHCCEEEEEC-CCeEEEEeC-CHHHHHHHHHHHHhh
Confidence 78999999999999983 345666654 467899999998764
No 130
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.95 E-value=3.5e-27 Score=219.18 Aligned_cols=299 Identities=10% Similarity=0.030 Sum_probs=186.4
Q ss_pred CCChhHHHHHHHHHhhC-C-C-----CCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh---hcC
Q 017633 30 APCLLENVLAEMVISAV-P-S-----IEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV---KAG 97 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~-~-~-----~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~~~ 97 (368)
.+.....++++.+++++ + + .+++++ |+||++|+..++.+.....+++.|++..++|+.+...+.. ..|
T Consensus 91 ~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G 170 (448)
T 3meb_A 91 PPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLK 170 (448)
T ss_dssp CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTT
T ss_pred CCCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCC
Confidence 34456678888888886 4 3 479999 9999999998664443445788999999888765443330 334
Q ss_pred CCccccCC-CCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 017633 98 SGVATLGL-PDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 175 (368)
Q Consensus 98 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~ 175 (368)
..+...++ ... .+.. |++++++.+++.+++++++++...+|++|.+.+ .+.+++|+++|++||+
T Consensus 171 ~~v~~~~~~~~~~~~~~-------------d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~l~~~~~~ 236 (448)
T 3meb_A 171 VPYKEYTYLRKDGELEI-------------DFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFT-EAQWKELLPIMKEKKH 236 (448)
T ss_dssp SCCEEECCBCTTSCSSB-------------CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCC-HHHHHHHHHHHHHHTC
T ss_pred CeEEEEeccccccCCCc-------------CHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCC-HHHHHHHHHHHHHCCC
Confidence 43332222 111 1111 899999999875445666666666666676554 4459999999999999
Q ss_pred EEEEehhhhch-hccc---Ccccccc-CCCcc---hhhhhhhcc-CCccceee--ee---------hH----HHHHHhcC
Q 017633 176 LLIFDEVMTGF-RLAY---GGAQEYF-GVTPD---LTTLGKIIG-GGLPVGAY--GG---------RR----DIMEMVAP 231 (368)
Q Consensus 176 ~li~De~~~~~-~~g~---~~~~~~~-~~~~d---i~s~sK~~~-~G~~iG~v--~~---------~~----~~~~~~~~ 231 (368)
++|+||+|.++ ..+. ......+ +..++ +.||||.++ +|+|+||+ ++ ++ ++++.+.
T Consensus 237 ~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~- 315 (448)
T 3meb_A 237 IAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMT- 315 (448)
T ss_dssp EEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHH-
T ss_pred EEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHH-
Confidence 99999999887 4321 1111111 12223 568999999 79999997 55 34 4555544
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHHHhcC------CceEEeeccce
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLK--------EPGTYEYLNKITGELTQGIIDAGKKAG------HAICGGYISGM 297 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~~~~~~~~ 297 (368)
......+.+++.+++.++.++++... -+.+.++++++++++++.|++... .+ .....+..+.+
T Consensus 316 --~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~~~~~~~~~~~~g~~ 392 (448)
T 3meb_A 316 --LQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKT-PGPGSKGTWDHILTAIGMF 392 (448)
T ss_dssp --HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCSTTTCCCTHHHHCCSSE
T ss_pred --HHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CCcCcccccceeCCCceEE
Confidence 12233455667788888777664210 022334445555555555544210 01 11112233334
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHH-HHcCeeecCCCCCccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQFEAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
.|..+ + .++...| .++||.+.++. .|+++.. +++++++++++|++++.+
T Consensus 393 ~~~~~--------------~----~~~~~~ll~~~gV~v~~G~---gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 393 TFTGL--------------T----PEHVDYLKEKWSIYLVKAG---GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp EECCC--------------C----HHHHHHHHHHHCEEECSGG---GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EecCC--------------C----HHHHHHHHHhCCEEEeCCC---cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 44332 1 3555566 46799999964 2665554 888899999999999865
No 131
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.2e-25 Score=204.66 Aligned_cols=317 Identities=10% Similarity=0.048 Sum_probs=208.6
Q ss_pred CCcHHHHHHHHHHHHcCCC-----CCC---CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHH-HhcCCceE
Q 017633 9 PSYLQVLAALGETMKKGTS-----FGA---PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR-AFTGRERI 78 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~-----~~~---~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~-~~~~~~~v 78 (368)
+.+|++++++.+++..... +.+ ..+...+++++++++++ +++++++++||++++..+++.+. ...+++.|
T Consensus 37 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~v 116 (406)
T 3cai_A 37 LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEV 116 (406)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEE
Confidence 5788999999998876321 111 24567899999999987 56899999999999999886541 23567899
Q ss_pred EEEcCCCCCCchhhhhh---cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 79 IKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
++.+++|++........ .|..+.........+.. |+++|++.++ ++++++++++.++++|.
T Consensus 117 i~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~-------------d~~~l~~~l~---~~~~~v~~~~~~nptG~ 180 (406)
T 3cai_A 117 IVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGEL-------------PTWQWESLIS---KSTRLVAVNSASGTLGG 180 (406)
T ss_dssp EEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCC-------------CGGGHHHHCC---TTEEEEEEESBCTTTCB
T ss_pred EEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCc-------------CHHHHHHHhC---CCceEEEEeCCcCCccc
Confidence 99998888765544432 34433222221111111 7899999886 46888888888888898
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchhhhhhhccCCccce-eeeehHHHHHHhcCCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVG-AYGGRRDIMEMVAPAG 233 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG-~v~~~~~~~~~~~~~~ 233 (368)
+.+ +++|.++|++||+++|+||+|+. |.. .....++.+.-+.|+||.+++ ++| ++++++++++.+....
T Consensus 181 ~~~----l~~i~~l~~~~~~~li~D~a~~~---g~~~~~~~~~~~d~~~~s~~K~~g~--~~G~~~~~~~~~~~~l~~~~ 251 (406)
T 3cai_A 181 VTD----LRAMTKLVHDVGALVVVDHSAAA---PYRLLDIRETDADVVTVNAHAWGGP--PIGAMVFRDPSVMNSFGSVS 251 (406)
T ss_dssp BCC----CHHHHHHHHHTTCEEEEECTTTT---TTCCCCHHHHCCSEEEEEGGGGTSC--SCEEEEESCHHHHHTSCCCC
T ss_pred cCC----HHHHHHHHHHcCCEEEEEccccc---CCCCCCchhcCCCEEEeehhhhcCC--CcCeEEEEehHHHhhcCCcc
Confidence 888 89999999999999999999962 221 223334433334578898764 399 9999998888776432
Q ss_pred Cc------cccccCCCCHHHHHHHHHHHHHHccCC-------------HHHHHHHHHHHHHHHHHHHHHhcCCceEEee-
Q 017633 234 PM------YQAGTLSGNPLAMTAGIHTLKRLKEPG-------------TYEYLNKITGELTQGIIDAGKKAGHAICGGY- 293 (368)
Q Consensus 234 ~~------~~~~t~~~~~~~~~a~~~~l~~~~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~- 293 (368)
.. ......+.+..+++++.++++.+.+.+ +.+.+.++.+.+++.+.+.+.+.+.......
T Consensus 252 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 331 (406)
T 3cai_A 252 TNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP 331 (406)
T ss_dssp SCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCC
T ss_pred cCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCc
Confidence 10 011133567777777777888775422 2344444444555555554444321111111
Q ss_pred --ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-------------CCccccc--cCCCHHHHHH
Q 017633 294 --ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------------FEAGFTS--LAHSSDDIQH 356 (368)
Q Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------~~~~~~~--~~~~~~~i~~ 356 (368)
.++++++.+. ..+..++.+.|.++||.+.++. ...+|++ ..++++++++
T Consensus 332 ~~~~~~~~~~~~--------------~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~ 397 (406)
T 3cai_A 332 EAQIPVVSFAVH--------------KVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQ 397 (406)
T ss_dssp SSBCSEEEEEET--------------TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHH
T ss_pred cccCCEEEEEEC--------------CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHH
Confidence 2445566542 1124678899999999998764 1345554 4458999999
Q ss_pred HHHHHHHH
Q 017633 357 TITAAEKV 364 (368)
Q Consensus 357 ~~~~l~~~ 364 (368)
++++|+++
T Consensus 398 ~~~~l~~~ 405 (406)
T 3cai_A 398 LVRALASL 405 (406)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99998753
No 132
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-26 Score=212.28 Aligned_cols=314 Identities=15% Similarity=0.124 Sum_probs=209.8
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCC-CChhHHHHHHHHHhhCC-CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 8 FPSYLQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAVP-SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
++.+|++++++.+++.. .++. ..+...++++++++.++ +.+ ++++++||++|+..+++.+ ..+++.|++..++
T Consensus 43 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~--~~~gd~Vl~~~~~ 118 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPVG--HLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANA--VEPGDVVLIGVAG 118 (393)
T ss_dssp CCCCHHHHHHHSSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHH--CCTTCEEEEEESS
T ss_pred CCCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhc--cCCCCEEEEEcCC
Confidence 34677888888776543 2211 12567888899998887 556 8999999999999999877 3567899999999
Q ss_pred CCCCc-hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 85 YHGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
|++.. .......|..+...+.+. .+ ..|+++|++.++++ +++++++++.++++|.+.+ +
T Consensus 119 ~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----l 178 (393)
T 1vjo_A 119 YFGNRLVDMAGRYGADVRTISKPW-GE-------------VFSLEELRTALETH--RPAILALVHAETSTGARQP----L 178 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCT-TC-------------CCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----C
T ss_pred hhHHHHHHHHHHcCCceEEEecCC-CC-------------CCCHHHHHHHHhhC--CceEEEEeccCCCcceecc----H
Confidence 98721 222233343332222111 11 12899999999842 4667777777788888887 8
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHHhcCC----CCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPA----GPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~~----~~~~~ 237 (368)
++|+++|++||+++|+||+|+ + ........ ...+|++ ++||+++++.|+|++++++++++.+... .....
T Consensus 179 ~~i~~l~~~~~~~li~Dea~~-~-g~~~~~~~--~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1vjo_A 179 EGVGELCREFGTLLLVDTVTS-L-GGVPIFLD--AWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYL 254 (393)
T ss_dssp TTHHHHHHHHTCEEEEECTTT-T-TTSCCCTT--TTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred HHHHHHHHHcCCEEEEECCcc-c-cCcCCccc--ccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceec
Confidence 999999999999999999997 3 11112222 2344554 6779998555999999999888877421 11111
Q ss_pred ------------cccC-CCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEee---ccceE
Q 017633 238 ------------AGTL-SGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGY---ISGMF 298 (368)
Q Consensus 238 ------------~~t~-~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~ 298 (368)
..++ +.+.++++++.++++.+.++ .+.++++++++++.+.|++. ++....+. .+.++
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~ 330 (393)
T 1vjo_A 255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI----GLSLHVEKEYRLPTLT 330 (393)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSSCGGGBCSSEE
T ss_pred CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc----CCcccCCccccCCcEE
Confidence 1233 67888999988898876432 34566677777777777653 32211111 12345
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC----Cccccc---cCCCHHHHHHHHHHHHHHHh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTS---LAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~----~~~~~~---~~~~~~~i~~~~~~l~~~l~ 366 (368)
++.+. ...+..++.+.|.++ ||.+.++.. ..+|++ +..+++++++++++|+++++
T Consensus 331 ~~~~~-------------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 331 TVCIP-------------DGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp EEECC-------------TTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred EEEcC-------------CCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 55541 122357899999988 999998742 345555 45678889999999998763
No 133
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=1.3e-25 Score=206.87 Aligned_cols=319 Identities=13% Similarity=0.035 Sum_probs=213.2
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCC--------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh----
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGA--------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---- 72 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~---- 72 (368)
..++.+|++++++.+++........ ..+...+++++++++++ +.+++++++||+++++.+++.+...
T Consensus 36 ~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~ 115 (416)
T 1qz9_A 36 SLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATR 115 (416)
T ss_dssp TSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhccccccc
Confidence 3467888999999999875321111 13566899999999998 5689999999999999998776433
Q ss_pred cCCceEEEEcCCCCCCchhhhh-hcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 73 TGRERIIKFEGCYHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
.+++++|+.++.+|+....... .... . ..+.+++.++. +++++++++ ++++++++++.++
T Consensus 116 ~~gd~vii~~~~~~~~~~~~~~~~~~~----------~----~~g~~~~~v~~--~~~l~~~i~---~~~~~v~~~~~~n 176 (416)
T 1qz9_A 116 SPERRVIVTETSNFPTDLYIAEGLADM----------L----QQGYTLRLVDS--PEELPQAID---QDTAVVMLTHVNY 176 (416)
T ss_dssp STTCCEEEEETTSCHHHHHHHHHHHHH----------H----CSSCEEEEESS--GGGHHHHCS---TTEEEEEEESBCT
T ss_pred CCCCcEEEEcCCCCCchHHHHHHHHHH----------h----cCCceEEEeCc--HHHHHHHhC---CCceEEEEecccc
Confidence 4566777777777764333221 1100 0 00112333333 677888886 4788898888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccc-eeeeehHHHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPV-GAYGGRRDIMEM 228 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~i-G~v~~~~~~~~~ 228 (368)
++|.+.+ +++|.++|++||+++|+||+|+.-. .......++ +|++ +++|++++|.++ |++++++++++.
T Consensus 177 ptG~~~~----l~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~--~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~ 248 (416)
T 1qz9_A 177 KTGYMHD----MQALTALSHECGALAIWDLAHSAGA--VPVDLHQAG--ADYAIGCTYKYLNGGPGSQAFVWVSPQLCDL 248 (416)
T ss_dssp TTCBBCC----HHHHHHHHHHHTCEEEEECTTTTTT--SCCCHHHHT--CSEEEECSSSTTCCCTTCCCEEEECTTTTTT
T ss_pred CcccccC----HHHHHHHHHHcCCEEEEEccccccC--cCCChhhcC--CCEEEecCcccCCCCCCCeEEEEECHHHHhc
Confidence 8898888 9999999999999999999996211 111222333 4554 567999888888 999999887766
Q ss_pred hcCCCCc--------------------cccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhc
Q 017633 229 VAPAGPM--------------------YQAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 229 ~~~~~~~--------------------~~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
+...... ......+.+..+++++.++++.+.++. +.++++++++++++.|.+.....
T Consensus 249 l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 328 (416)
T 1qz9_A 249 VPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAH 328 (416)
T ss_dssp SCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 6532110 011223567788888888888775433 56667777777777776642200
Q ss_pred CCceEEe----eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccccc---CCCHHHHHHHH
Q 017633 286 GHAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSL---AHSSDDIQHTI 358 (368)
Q Consensus 286 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~---~~~~~~i~~~~ 358 (368)
+.....+ ..++++++.+. + ..++.+.|.++||.+...+...+|+++ .++++|+++++
T Consensus 329 g~~~~~~~~~~~~~~~~~~~~~-------------~---~~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~ 392 (416)
T 1qz9_A 329 ELTLVTPREHAKRGSHVSFEHP-------------E---GYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAV 392 (416)
T ss_dssp CCEECSCSSGGGBCSEEEEECT-------------T---HHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHH
T ss_pred CeEEeCCCCHHHcCCEEEEecC-------------C---HHHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHH
Confidence 2221111 13456666541 1 467899999999998765445566643 57999999999
Q ss_pred HHHHHHHhh
Q 017633 359 TAAEKVLRQ 367 (368)
Q Consensus 359 ~~l~~~l~~ 367 (368)
++|++++++
T Consensus 393 ~~l~~~~~~ 401 (416)
T 1qz9_A 393 QILGEILDR 401 (416)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998864
No 134
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.95 E-value=1.1e-26 Score=219.95 Aligned_cols=342 Identities=13% Similarity=0.006 Sum_probs=198.2
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC----CC------CCeEEEeCChHHHHHHHHHHHH---Hh
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV----PS------IEMVRFVNSGTEACMGVLRLAR---AF 72 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~------~~~v~~~~~gt~a~~~al~~~~---~~ 72 (368)
..++.+|++++++.+++.. ..|+.+.....++++.+++++ ++ .+++++|+||++|+..++..+. ..
T Consensus 112 ~~~~~~~~~v~a~~~~~~~-~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~ 190 (533)
T 3f6t_A 112 ELGLNRDKVVAEWVNGAVA-NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLL 190 (533)
T ss_dssp TTCCCHHHHHHHHHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred CCCcCCcHHHHHHHHHHHh-CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcc
Confidence 3455678888888887765 334334443444555555443 11 4799999999999999997521 12
Q ss_pred cCCceEEEEcCCCCCCchhhhhhcCCCccccCCCC---CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc
Q 017633 73 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD---SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 149 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~ 149 (368)
.+++.|++..++|++...... ..+..+....+.. ..... |+++|+++++ +++++++++..
T Consensus 191 ~~gd~Viv~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~-------------d~~~l~~~l~---~~~k~v~l~~p 253 (533)
T 3f6t_A 191 KKGDKIAINEPIFTPYLRIPE-LKDYELVEVDLHSYEKNDWEI-------------EPNEIEKLKD---PSIKALIVVNP 253 (533)
T ss_dssp CTTCEEEEESSCCHHHHTSGG-GGGSEEEEECCCEETTTTSEE-------------CHHHHHHHSC---TTEEEEEEESS
T ss_pred CCcCEEEEcCCCcHHHHHHHH-HcCCeEEEEEecCCcccCCCC-------------CHHHHHHHhC---CCCeEEEEeCC
Confidence 467899999998887543332 2333222211110 01111 7999999886 46777777655
Q ss_pred CCCCCcccCCHHHHHHHHHHHH-HhCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHH--
Q 017633 150 VGNSGFIAPKPDFLNAIRRITK-ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRD-- 224 (368)
Q Consensus 150 ~~~~g~~~~~~~~l~~i~~l~~-~~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~-- 224 (368)
++++|.+.+ .+.+++|+++|+ +||+++|+||+|.++ ...........+....+.||||.++ +|+|+||++++++
T Consensus 254 ~NPtG~~~~-~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 254 TNPTSKEFD-TNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332 (533)
T ss_dssp CTTTCBCCC-HHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred CCCCccccC-HHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence 555676555 445999999999 589999999999987 4222111111223355679999998 8999999988765
Q ss_pred ---HHHHhc-----------------------------CCCCccccccCCCCHHHHHHHH-HHHHHHc-------cCCHH
Q 017633 225 ---IMEMVA-----------------------------PAGPMYQAGTLSGNPLAMTAGI-HTLKRLK-------EPGTY 264 (368)
Q Consensus 225 ---~~~~~~-----------------------------~~~~~~~~~t~~~~~~~~~a~~-~~l~~~~-------~~~~~ 264 (368)
+++.+. .........+.+.+++++.++. .++..+. .+...
T Consensus 333 ~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~ 412 (533)
T 3f6t_A 333 FDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYI 412 (533)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHH
T ss_pred HHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHH
Confidence 443321 0012223455566777776632 1223332 12223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchh---cccccHHHHHHHHHHH-HcCeeecCCCC
Q 017633 265 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA---KKSETTKFARFYRGML-EEGVYFAPSQF 340 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~-~~Gi~~~~~~~ 340 (368)
++.+++.+..++.+.+.+. .+.....+..+.++|+.+........... ......+..+++..++ ++||.+.++..
T Consensus 413 ~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~ 491 (533)
T 3f6t_A 413 DIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVG 491 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEE
T ss_pred HHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcc
Confidence 3333333333333333332 33332334455566666531000000000 0000012345665555 67999999742
Q ss_pred -----CccccccC-CCHHHHHHHHHHHHHHHhh
Q 017633 341 -----EAGFTSLA-HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 341 -----~~~~~~~~-~~~~~i~~~~~~l~~~l~~ 367 (368)
..+|+++. .+++++++++++|++++.+
T Consensus 492 f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 492 FGAKPGELRVSQANLPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp ECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 34577766 5999999999999998864
No 135
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.95 E-value=1.1e-27 Score=218.64 Aligned_cols=316 Identities=11% Similarity=0.010 Sum_probs=191.1
Q ss_pred HHHHHHHHHHH-Hc-CCCCCCCChhHHHHHHHHHhhC-C------CCC--eEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 12 LQVLAALGETM-KK-GTSFGAPCLLENVLAEMVISAV-P------SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 12 ~~v~~a~~~~~-~~-~~~~~~~~~~~~~l~~~l~~~~-~------~~~--~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
+.++++.. .+ +. ....|.+.....+|++++++++ + ..+ ++++|+||++|+..++.++..+.+ |.|++
T Consensus 50 ~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv 127 (405)
T 3k7y_A 50 DSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYV 127 (405)
T ss_dssp HHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEE
T ss_pred HHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEE
Confidence 45666655 33 33 2333445567778888888865 2 124 469999999999999977654336 99999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCC-CCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEccc-CCCCCccc
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGL-PDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIA 157 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~-~~~~g~~~ 157 (368)
.+++|..+...+. ..|..+...++ ... .++ |++++++.+++. ++++++++++. +|++|.++
T Consensus 128 ~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~--------------d~~~l~~~l~~~-~~~~~i~l~~~~~NPTG~~~ 191 (405)
T 3k7y_A 128 TNPPYINHVNMIE-SRGFNLKYINFFDYNLIDI--------------NYDLFLNDLRNI-PNGSSVILQISCYNPCSVNI 191 (405)
T ss_dssp ESSCCHHHHHHHH-TTTCEEEEECCEETTTTEE--------------CHHHHHHHHHHS-CSSCEEEECCSSCTTTCCCC
T ss_pred eCCCCHhHHHHHH-HcCCeEEEEeccccccCCc--------------CHHHHHHHHHhC-CCCeEEEEeCCCCCCCCCCC
Confidence 9999987654433 33333322221 111 111 899999999854 24567777766 45566554
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccC---ccccc----cCCCcchhhhhhhcc-CCccceeeee---hHHH
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG---GAQEY----FGVTPDLTTLGKIIG-GGLPVGAYGG---RRDI 225 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~---~~~~~----~~~~~di~s~sK~~~-~G~~iG~v~~---~~~~ 225 (368)
+.+++++|+++|++||+++|+||+|.++ ..+.. ..... ......+.||||.|+ +|||+||+++ ++++
T Consensus 192 -s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~ 270 (405)
T 3k7y_A 192 -EEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEE 270 (405)
T ss_dssp -CHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHH
T ss_pred -CHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHH
Confidence 5555999999999999999999999988 43210 11111 112233568999999 9999999743 5665
Q ss_pred HHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHc-cCCH-------HHHHHHHHHHHHHHHHHHHHhcCC----ceEEe
Q 017633 226 MEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGT-------YEYLNKITGELTQGIIDAGKKAGH----AICGG 292 (368)
Q Consensus 226 ~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~-~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~ 292 (368)
++.+... .........+.+.+++.++..+++.-. .+.| +++++++++.+.+.|++-..+.+. ....+
T Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p 350 (405)
T 3k7y_A 271 KKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK 350 (405)
T ss_dssp HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS
T ss_pred HHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC
Confidence 5443210 011111222456677777666664210 0112 333455555555555410003332 11223
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhhC
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~ 368 (368)
..|.++|+.+ + .+++..|.++||.+.|++ |++++ .+++++++++++|++++.++
T Consensus 351 ~gg~f~~~~l-------------~-----~~~~~~L~~~gV~v~p~~----Ris~a~~~~~~i~~~~~~i~~~~~~~ 405 (405)
T 3k7y_A 351 QRGLFSFVPL-------------L-----AKIAEHLKTHHIYIINNG----RINVSGITKNNVDYIADKICLSLSQI 405 (405)
T ss_dssp CCSSEEECGG-------------G-----GGGTTTTTTTTEECCTTS----EEEGGGCCTTHHHHHHHHHHHHHHCC
T ss_pred CceEEEecCC-------------C-----HHHHHHHHHCCEeecCCC----eEEEeccCHHHHHHHHHHHHHHHhhC
Confidence 3444555432 1 133556677899999975 67664 58899999999999998753
No 136
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=5.9e-26 Score=208.81 Aligned_cols=314 Identities=14% Similarity=0.095 Sum_probs=207.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC--ChhHHHHHHHHHhhCC-CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAP--CLLENVLAEMVISAVP-SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~-~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
.+|++++++.+.+ ..+..+ .+...+++++++++++ +.+ .+++++||++|++.+++.+ ..+++.|++.+++|
T Consensus 24 ~~~~v~~a~~~~~---~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~--~~~gd~Vl~~~~~~ 98 (411)
T 3nnk_A 24 ADPRVLRAMSSQL---IGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSA--IRPGDKVLVPVFGR 98 (411)
T ss_dssp CCHHHHHHHTSCC---CCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHH--CCTTCEEEEEECSH
T ss_pred CCHHHHHHhhccc---cccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHh--cCCCCEEEEecCCc
Confidence 3455666655432 122211 2456889999999887 444 4889999999999999877 46788999999999
Q ss_pred CCCc-hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 86 HGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|+.. .......|..+...+.+. .+.. |+++++++++++ ++++++++++++++|.+.+ ++
T Consensus 99 ~~~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~ 158 (411)
T 3nnk_A 99 FGHLLCEIARRCRAEVHTIEVPW-GEVF-------------TPDQVEDAVKRI--RPRLLLTVQGDTSTTMLQP----LA 158 (411)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCT-TCCC-------------CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CT
T ss_pred hHHHHHHHHHHcCCeEEEEecCC-CCCC-------------CHHHHHHHHhhC--CCeEEEEeCCCCCcceecc----HH
Confidence 8742 223333344332222211 1111 899999999853 5778888888888898888 89
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCC----------
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP---------- 234 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~---------- 234 (368)
+|+++|++||+++|+||+|+.. ........++.+..+.+++|+++++.++|++++++++++.+.....
T Consensus 159 ~i~~l~~~~~~~li~Dea~~~~--~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 236 (411)
T 3nnk_A 159 ELGEICRRYDALFYTDATASLG--GNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAH 236 (411)
T ss_dssp THHHHHHHHTCEEEEECTTTBT--TBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTC
T ss_pred HHHHHHHHcCCEEEEECCcccC--CcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhccccccccccccc
Confidence 9999999999999999998621 1122333445444456788998877789999999998877654220
Q ss_pred -----------------------ccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 017633 235 -----------------------MYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHA 288 (368)
Q Consensus 235 -----------------------~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~ 288 (368)
.......+.+..+++++.++++.+.++ .+.+++.++++++++.|++. +..
T Consensus 237 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~ 312 (411)
T 3nnk_A 237 RDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM----GLE 312 (411)
T ss_dssp CCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCC
T ss_pred ccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----CCE
Confidence 001122355777888887888766543 34566666666776666653 322
Q ss_pred eEE---eeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC----CCccccc---cCCCHHHHHHH
Q 017633 289 ICG---GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTS---LAHSSDDIQHT 357 (368)
Q Consensus 289 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~----~~~~~~~---~~~~~~~i~~~ 357 (368)
... ...+.++++.+. +..+..++.+.|+++ ||.++++. ...+|++ ..+++++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~ 379 (411)
T 3nnk_A 313 TFGDLKHKMNNVLGVVIP-------------QGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTT 379 (411)
T ss_dssp BCSCGGGBCSSEEEEECC-------------TTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHH
T ss_pred eCCCcccccccEEEEECC-------------CCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHH
Confidence 111 122455566542 122357889999887 99998763 2234544 34589999999
Q ss_pred HHHHHHHHhh
Q 017633 358 ITAAEKVLRQ 367 (368)
Q Consensus 358 ~~~l~~~l~~ 367 (368)
+++|++++++
T Consensus 380 ~~~l~~~l~~ 389 (411)
T 3nnk_A 380 LSALEAVLNY 389 (411)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999865
No 137
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.94 E-value=2.7e-26 Score=215.83 Aligned_cols=334 Identities=13% Similarity=0.061 Sum_probs=197.9
Q ss_pred CcHHHHHHHHHHHHcC---C-CCCCCChhHHHHHHHHHhhC----C---CCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 10 SYLQVLAALGETMKKG---T-SFGAPCLLENVLAEMVISAV----P---SIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---~-~~~~~~~~~~~l~~~l~~~~----~---~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.++++++++.+.+... . ..+.+.....++++.+++++ + +.+++++|+||++++..++..+. ..+++.|
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~~gd~V 185 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI-RNEKDGI 185 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC-CSTTEEE
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc-CCCCCEE
Confidence 5666788777777663 1 12233344556666666654 2 57899999999999999998762 1367889
Q ss_pred EEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCc
Q 017633 79 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~ 155 (368)
++..++|+..... +...|..+....+....++ ..|+++|++++++. ..+++++++...+|++|.
T Consensus 186 lv~~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~ 252 (500)
T 3tcm_A 186 LVPIPQYPLYSAS-IALHGGALVPYYLNESTGW------------GLETSDVKKQLEDARSRGINVRALVVINPGNPTGQ 252 (500)
T ss_dssp EEEESCCTHHHHH-HHHTTCEEEEEECBTTTTS------------BCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCC
T ss_pred EEeCCCcHhHHHH-HHHcCCEEEEEecccccCC------------CCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcc
Confidence 9999888765443 3334443322222111111 01899999999851 125666665555555666
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc--Ccccc----ccCC---C---cchhhhhhhc-c-CCccceeee
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQE----YFGV---T---PDLTTLGKII-G-GGLPVGAYG 220 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~~~----~~~~---~---~di~s~sK~~-~-~G~~iG~v~ 220 (368)
+++ .+.+++|+++|++||+++|+||+|.++ +.+. ...+. .++. . .-+.||||++ + +|+|+||++
T Consensus 253 ~~s-~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 331 (500)
T 3tcm_A 253 VLA-EENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFE 331 (500)
T ss_dssp CCC-HHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEE
T ss_pred cCC-HHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEE
Confidence 555 444999999999999999999999876 4321 22211 1211 1 1234899999 5 799999998
Q ss_pred e---hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHH-----------Hcc-CCHHHHHHHHHHHHHHHHHHHHHhc
Q 017633 221 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-----------LKE-PGTYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 221 ~---~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~-----------~~~-~~~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
+ ++++++.+... ...+++.+.+++.++..+++. ... +.+.++++++++.+++.|++ .
T Consensus 332 ~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~ 403 (500)
T 3tcm_A 332 ITGFSAPVREQIYKI----ASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK----L 403 (500)
T ss_dssp EESCCTTHHHHHHHH----HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----S
T ss_pred EeCCCHHHHHHHHHH----HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C
Confidence 7 88888877631 123456788888877766641 110 22334444555555554443 3
Q ss_pred -CCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHH-HHHHHcCeeecCCCCC-------ccccccCCCHHHHHH
Q 017633 286 -GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQFE-------AGFTSLAHSSDDIQH 356 (368)
Q Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~~~-------~~~~~~~~~~~~i~~ 356 (368)
++....+..+.+.|..+..+. ......+.........++ +.|.++||.+.|+..+ .+|+++..+++++++
T Consensus 404 ~g~~~~~~~g~~~~~~~~~lp~-~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~ 482 (500)
T 3tcm_A 404 EGITCNEAEGAMYVFPQICLPQ-KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPA 482 (500)
T ss_dssp TTEECCCCCBTTEECCEECCCH-HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHH
T ss_pred CCcEEecCCeEEEEeeeecCch-hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHH
Confidence 222222233444454332100 000000000000123333 5555679999987432 357777789999999
Q ss_pred HHHHHHHHHhh
Q 017633 357 TITAAEKVLRQ 367 (368)
Q Consensus 357 ~~~~l~~~l~~ 367 (368)
++++|++++++
T Consensus 483 ~i~~l~~~~~~ 493 (500)
T 3tcm_A 483 VISRFTVFHEA 493 (500)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 138
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.94 E-value=6.6e-27 Score=215.12 Aligned_cols=318 Identities=13% Similarity=0.060 Sum_probs=192.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhC-C-C-----CCeEE--EeCChHHHHHHHHHHHHHh-cCCceEE
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAV-P-S-----IEMVR--FVNSGTEACMGVLRLARAF-TGRERII 79 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-~-----~~~v~--~~~~gt~a~~~al~~~~~~-~~~~~vi 79 (368)
++|.+.+++.++.......+.+.....++++.+++++ + . .+++. .+.+|+++++.+..++..+ .++|.|+
T Consensus 56 ~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vl 135 (409)
T 4eu1_A 56 DQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIY 135 (409)
T ss_dssp SCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEE
T ss_pred CCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEE
Confidence 4566888887763322223334555678888888875 3 2 46674 4889999999886655433 4568999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|++.... +...|..+...+.....+. . .|++++++.+++++++++++++...+|++|.+.+
T Consensus 136 v~~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~- 201 (409)
T 4eu1_A 136 GPDVGYPNHESI-FAKAGMELTPYSYYDPATK---------G---LNLAGMLECLDKAPEGSVILVHACAHNPTGVDPT- 201 (409)
T ss_dssp EESSCCTHHHHH-HHHTTCEEEEECCEETTTT---------E---ECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCC-
T ss_pred EeCCCcHhHHHH-HHHcCCeEEEEEeecCcCC---------c---CcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCC-
Confidence 999888776433 3333433322111000110 0 0899999999865445666665444555665555
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch-hccc---Cccccc-cCCCcc---hhhhhhhcc-CCccceee---eehHH---
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQEY-FGVTPD---LTTLGKIIG-GGLPVGAY---GGRRD--- 224 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~---~~~~~~-~~~~~d---i~s~sK~~~-~G~~iG~v---~~~~~--- 224 (368)
.+.+++|+++|++||+++|+||+|.++ ..+. ...... .+..++ +.||||.++ +|+|+||+ +.+++
T Consensus 202 ~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~ 281 (409)
T 4eu1_A 202 HDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAK 281 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHH
Confidence 445999999999999999999999888 4331 111111 133333 358999999 89999995 56676
Q ss_pred -HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeecc
Q 017633 225 -IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--------EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 295 (368)
Q Consensus 225 -~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 295 (368)
+++.+. ......+++++.+++.++.++++... -+.++++++++++++++.|++......+....+..+
T Consensus 282 ~l~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 358 (409)
T 4eu1_A 282 RLVSQLA---LLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVG 358 (409)
T ss_dssp HHHHHHH---HHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCS
T ss_pred HHHHHHH---HHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCce
Confidence 555554 22234555677888888887776210 022344555555555555554310000211122333
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+.|..+ + .+++..|+ ++||.+.+++ .+++ ...+++++++++++|++++
T Consensus 359 ~~~~~~~--------------~----~~~~~~ll~~~gv~v~p~~--Ri~~-~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 359 MMAYTGL--------------T----REQVELLRSEYHIYMTLNG--RAAV-SGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp SEEECCC--------------C----HHHHHHHHHHHCEECCTTC--EEEG-GGCCTTTHHHHHHHHHHHH
T ss_pred EEEEeCC--------------C----HHHHHHHHHcCCEEEcCCC--EEEE-EecCHhhHHHHHHHHHHHh
Confidence 4444322 1 34456665 5699999974 2222 2357788999999999876
No 139
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=5.3e-26 Score=204.70 Aligned_cols=312 Identities=14% Similarity=0.086 Sum_probs=206.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC--ChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAP--CLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
.+|++++++.+++.. +.++ .+...+++++++++++ + .+++++++||++|+..+++.+. + ++|++.+++
T Consensus 11 ~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~---~-d~vl~~~~~ 83 (353)
T 2yrr_A 11 IPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD---R-GPVLVLVNG 83 (353)
T ss_dssp CCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS---C-CCEEEEECS
T ss_pred CCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc---C-CcEEEEcCC
Confidence 567888888776643 2222 3457899999999987 3 5789999999999999997652 3 789998888
Q ss_pred CCCCc-hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 85 YHGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
|++.. .......|..+....... .+. .|++++++.++++ +++++++++.++++|.+.+ +
T Consensus 84 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~ 143 (353)
T 2yrr_A 84 AFSQRVAEMAALHGLDPEVLDFPP-GEP-------------VDPEAVARALKRR--RYRMVALVHGETSTGVLNP----A 143 (353)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCT-TSC-------------CCHHHHHHHHHHS--CCSEEEEESEETTTTEECC----H
T ss_pred CchHHHHHHHHHcCCceEEEeCCC-CCC-------------CCHHHHHHHHHhC--CCCEEEEEccCCCcceecC----H
Confidence 88751 122233344332222211 111 1899999999853 5677777777788888888 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCc--------
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM-------- 235 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~-------- 235 (368)
++|.++|++||+++|+||+|. + .........++.+.-+.+++|+++++.++||+++++++++.+......
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~-~-~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 221 (353)
T 2yrr_A 144 EAIGALAKEAGALFFLDAVTT-L-GMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVA 221 (353)
T ss_dssp HHHHHHHHHHTCEEEEECTTT-T-TTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCcc-c-ccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHh
Confidence 999999999999999999994 3 111122333333333456789887655689999999888777520000
Q ss_pred ----cccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEee--ccceEEEEeecCC
Q 017633 236 ----YQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGY--ISGMFGFFFTEGP 306 (368)
Q Consensus 236 ----~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 306 (368)
.....++.+..++.++.++++.+.++ .+.++++++++++++.|++. +....... .+.++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~--- 294 (353)
T 2yrr_A 222 EHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR----GFRPYPKASPLPTVLVVRPP--- 294 (353)
T ss_dssp HHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCEESCSSSBCTTEEEEECC---
T ss_pred hhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC----CCccccCccCCCeEEEEECC---
Confidence 01123356777878777888766443 34556666666666666653 32211111 3445566642
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCC----CCccccc--cCCCHHHHH-HHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQ-HTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~--~~~~~~~i~-~~~~~l~~~l~~ 367 (368)
...+..++.+.|.++||.+.++. ...+|++ ...+++|++ +++++|++++++
T Consensus 295 ----------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 295 ----------EGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp ----------TTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred ----------CCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 11224789999999999998764 2345554 346888898 999999998865
No 140
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=7.9e-26 Score=203.61 Aligned_cols=311 Identities=18% Similarity=0.084 Sum_probs=201.8
Q ss_pred CcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
.+|++++++.+++.. .++ ...+...+++++++++++ +.+++++++||++|+..+++.+ ..++++|++..++|++
T Consensus 12 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~ 87 (352)
T 1iug_A 12 LHPKALEALARPQLH--HRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNL--FAPGERVLVPVYGKFS 87 (352)
T ss_dssp CCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHH--CCTTCEEEEEECSHHH
T ss_pred CCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhc--cCCCCeEEEEeCCchh
Confidence 568898888776542 121 122456899999999987 5679999999999999999876 3467899999988887
Q ss_pred Cch-hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 017633 88 HAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 166 (368)
Q Consensus 88 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i 166 (368)
... ......|..+....... .+.. |++++++ ++++++++++.++++|.+.+ +++|
T Consensus 88 ~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~------~~~~~v~~~~~~nptG~~~~----l~~i 143 (352)
T 1iug_A 88 ERFYEIALEAGLVVERLDYPY-GDTP-------------RPEDVAK------EGYAGLLLVHSETSTGALAD----LPAL 143 (352)
T ss_dssp HHHHHHHHHTTCEEEEEECCT-TCCC-------------CTTTSCC------SSCSEEEEESEETTTTEECC----HHHH
T ss_pred HHHHHHHHHcCCceEEEeCCC-CCCC-------------CHHHHhc------cCCcEEEEEEecCCcceecC----HHHH
Confidence 541 11122333332222211 1111 5555554 25677777777788888888 9999
Q ss_pred HHHHHHh--CCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCC----------CC
Q 017633 167 RRITKEN--GALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA----------GP 234 (368)
Q Consensus 167 ~~l~~~~--~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~----------~~ 234 (368)
.++|++| |+++|+||+|+.-. .......++.+.-+.++||+++++.++|++++++++++.+... ..
T Consensus 144 ~~l~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
T 1iug_A 144 ARAFKEKNPEGLVGADMVTSLLV--GEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKA 221 (352)
T ss_dssp HHHHHHHCTTCEEEEECTTTBTT--BCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHH
T ss_pred HHHHHhhCCCCEEEEECCccccC--cceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhh
Confidence 9999999 99999999996211 1122223333222346789887666789999988876542210 00
Q ss_pred c-cccccCCCCHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCccc
Q 017633 235 M-YQAGTLSGNPLAMTAGIHTLKRLKEP--GTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 235 ~-~~~~t~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 310 (368)
. .....++.+..++.++.++++.+.+. .+.++++++++++.+.|++. +.....+ ..+.++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~------- 290 (352)
T 1iug_A 222 QKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG----GLRPVPKRFSPAVAAFYLP------- 290 (352)
T ss_dssp HTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT----TCEESCSSBCTTCEEEECC-------
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccccccCCeEEEEEcC-------
Confidence 0 01123466788888888888876543 34455566666666666553 3322111 14567777652
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCC----CCcccccc--CCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSL--AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~~--~~~~~~i~~~~~~l~~~l~~ 367 (368)
+..+..++.+.|.++||.+.++. ...+|+++ ..+++++++++++|++++++
T Consensus 291 ------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 291 ------EGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp ------TTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 11224789999999999999874 23455543 35899999999999998864
No 141
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.94 E-value=1.7e-25 Score=204.58 Aligned_cols=315 Identities=11% Similarity=0.060 Sum_probs=204.3
Q ss_pred CcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC-CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
.+|++++++.+++.. .+. .+.+...+++++++++++ +.+ ++++++||++|+..+++.+ ..+++.|++..++|+
T Consensus 30 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~ 105 (393)
T 2huf_A 30 APQRVLDAMSRPILG--HLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNL--LEDGDVILIGHTGHW 105 (393)
T ss_dssp CCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHH--CCTTCEEEEEESSHH
T ss_pred CCHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHH--hCCCCEEEEECCCcc
Confidence 567888888765543 121 234568899999999987 444 8999999999999999876 356789999999888
Q ss_pred CCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 87 GHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
+.... .....|..+...+... .+ ..|++++++.+++. +++++++++.++++|.+.+ +++
T Consensus 106 ~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~ 165 (393)
T 2huf_A 106 GDRSADMATRYGADVRVVKSKV-GQ-------------SLSLDEIRDALLIH--KPSVLFLTQGDSSTGVLQG----LEG 165 (393)
T ss_dssp HHHHHHHHHHTTCEEEEEECCT-TC-------------CCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTT
T ss_pred hHHHHHHHHHcCCeeEEEeCCC-CC-------------CCCHHHHHHHHhcc--CCcEEEEEccCCCccccCC----HHH
Confidence 74211 1122333332221111 11 11899999999842 4677777777778888888 899
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC----Cccc----
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG----PMYQ---- 237 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~----~~~~---- 237 (368)
|.++|++||+++|+||+|.... .......++.+.-+.++||+++|+.++|++++++++++.+...+ ++..
T Consensus 166 i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
T 2huf_A 166 VGALCHQHNCLLIVDTVASLGG--APMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSL 243 (393)
T ss_dssp HHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHH
T ss_pred HHHHHHHcCCEEEEEcccccCC--CCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHH
Confidence 9999999999999999985211 11222223332223467799875455699999998888776431 1110
Q ss_pred -----------ccc-CCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eccceEE
Q 017633 238 -----------AGT-LSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFG 299 (368)
Q Consensus 238 -----------~~t-~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~ 299 (368)
..+ .+.+..+++++.++++.+.++ ...++++++++++++.|.+. +.....+ ..+.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~ 319 (393)
T 2huf_A 244 VGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA----GFELYADPKDRLSTVTT 319 (393)
T ss_dssp HHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSSCGGGBCTTEEE
T ss_pred HHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc----CCeeccCccccCCcEEE
Confidence 111 245666777777788766432 24556666667776666653 3221111 1233666
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCCC----Ccccccc---CCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSL---AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~----~~~~~~~---~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+. ...+..++.+.|+++ ||.+.++.. ..+|+++ .++++++++++++|++++++
T Consensus 320 ~~~~-------------~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 320 IKVP-------------QGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp EECC-------------TTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EEcC-------------CCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 6542 112246789999875 999998742 3456554 35789999999999998864
No 142
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=4.9e-25 Score=203.48 Aligned_cols=315 Identities=14% Similarity=0.093 Sum_probs=202.1
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCC-----------CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH-hc-
Q 017633 8 FPSYLQVLAALGETMKKGTSFGA-----------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-FT- 73 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~-~~- 73 (368)
++.+|++++++.+++.....++. ..+...+++++++++++ +.+++++++||++|++.+++.+.. +.
T Consensus 32 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~ 111 (423)
T 3lvm_A 32 TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQK 111 (423)
T ss_dssp CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhcc
Confidence 46788999999988772111111 12456889999999987 677999999999999999976642 22
Q ss_pred CCceEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+++.|++..+.|++........ .|..+...+... .+.. |+++++++++ +++++++++++++
T Consensus 112 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~i~---~~~~~v~~~~~~n 174 (423)
T 3lvm_A 112 KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR-NGII-------------DLKELEAAMR---DDTILVSIMHVNN 174 (423)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT-TSCC-------------CHHHHHHHCC---TTEEEEECCSBCT
T ss_pred CCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC-CCcc-------------CHHHHHHhcC---CCcEEEEEeCCCC
Confidence 4789999988888765444322 233322221111 1111 8999999997 4788999998888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccCCCcchh--hhhhhccCCccceeeeehHHHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEM 228 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~ 228 (368)
++|.+.+ +++|+++|++||++||+||+|+. +.. ..... ..+|++ ++||.++ +.++|+++++++..+.
T Consensus 175 ptG~~~~----l~~i~~l~~~~~~~li~Dea~~~---~~~~~~~~~--~~~di~~~s~sK~~g-~~g~G~~~~~~~~~~~ 244 (423)
T 3lvm_A 175 EIGVVQD----IAAIGEMCRARGIIYHVDATQSV---GKLPIDLSQ--LKVDLMSFSGHKIYG-PKGIGALYVRRKPRVR 244 (423)
T ss_dssp TTCBBCC----HHHHHHHHHHHTCEEEEECTTTT---TTSCCCTTT--SCCSEEEEESTTTTS-CSSCEEEEECBTTBCC
T ss_pred CCccccC----HHHHHHHHHHcCCEEEEEhhhhc---CCCCcChhh--cCCCEEEechHHhcC-CCCeEEEEEeccccCC
Confidence 8998888 99999999999999999999963 211 22222 335554 5679665 3459999988776555
Q ss_pred hcCCCC----ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeec----cceEEE
Q 017633 229 VAPAGP----MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI----SGMFGF 300 (368)
Q Consensus 229 ~~~~~~----~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~ 300 (368)
+..... .....+.+.+..+++++.++++.+.+. .+.+.++.+.+++.+.+.+.+.+........ +.++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 322 (423)
T 3lvm_A 245 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEE--MATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNV 322 (423)
T ss_dssp CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEE
T ss_pred CCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE
Confidence 542110 001233456777888777888766432 3444444444444454444444222122211 244455
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------Ccccc--ccCCCHHHHH
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFT--SLAHSSDDIQ 355 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~~--~~~~~~~~i~ 355 (368)
.+. ..+..++.+.|.+ |.+.++.. ..+|+ ...+++++++
T Consensus 323 ~~~--------------~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~ 386 (423)
T 3lvm_A 323 SFN--------------YVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID 386 (423)
T ss_dssp EET--------------TSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHH
T ss_pred EeC--------------CCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHH
Confidence 441 1124667777766 77777531 22343 4456899999
Q ss_pred HHHHHHHHHHhh
Q 017633 356 HTITAAEKVLRQ 367 (368)
Q Consensus 356 ~~~~~l~~~l~~ 367 (368)
+++++|++++++
T Consensus 387 ~~~~~l~~~~~~ 398 (423)
T 3lvm_A 387 YTIELVRKSIGR 398 (423)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 143
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.94 E-value=9.8e-26 Score=206.73 Aligned_cols=314 Identities=12% Similarity=0.008 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhCC-------CCCeEEE--eCChHHHHHHHHHHHHHh-cCCceEEEE
Q 017633 13 QVLAALGETMKKGTSF-GAPCLLENVLAEMVISAVP-------SIEMVRF--VNSGTEACMGVLRLARAF-TGRERIIKF 81 (368)
Q Consensus 13 ~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~~v~~--~~~gt~a~~~al~~~~~~-~~~~~vi~~ 81 (368)
.+++++.+.......+ +.+.....++++.+++++. +++++++ |+||++|+..+++.+..+ .+++.|++.
T Consensus 50 ~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~ 129 (401)
T 7aat_A 50 CVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLP 129 (401)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEc
Confidence 5788887766532222 2233445677777777653 1788877 999999999998765433 457899999
Q ss_pred cCCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
.++|..+... +...|..+...++ ....+.. |++++++.+.+..++++++++.+.+|++|.+.+.
T Consensus 130 ~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-------------d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~- 194 (401)
T 7aat_A 130 KPSWGNHTPI-FRDAGLQLQAYRYYDPKTCSL-------------DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQ- 194 (401)
T ss_dssp ESCCTTHHHH-HHHTTCEEEEEECEETTTTEE-------------CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCH-
T ss_pred CCCchhHHHH-HHHcCCeeEeeeeeccccCcc-------------CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCH-
Confidence 9888876433 3333433322111 1011111 7888888887644567777777776767765554
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhch-hccc---Ccccc----ccCCCcchhhhhhhcc-CCccceeeee---hHH----
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQE----YFGVTPDLTTLGKIIG-GGLPVGAYGG---RRD---- 224 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~-~~g~---~~~~~----~~~~~~di~s~sK~~~-~G~~iG~v~~---~~~---- 224 (368)
+.+++|+++|++||+++|+||+|.++ ..+. ..... ......-+.|+||.++ +|+|+||+++ +++
T Consensus 195 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~ 274 (401)
T 7aat_A 195 EQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKR 274 (401)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHH
Confidence 44999999999999999999999887 4321 11111 1122223468999999 8999999865 555
Q ss_pred HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHH------cc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc
Q 017633 225 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 296 (368)
Q Consensus 225 ~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 296 (368)
+...+. ......+.+.+..++.++...++.- .+ +.+.++++++++++.+.|++.....+.....+..+.
T Consensus 275 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~ 351 (401)
T 7aat_A 275 VESQLK---ILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGM 351 (401)
T ss_dssp HHHHHH---HHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSS
T ss_pred HHHHHH---HHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcce
Confidence 333333 1222234455556665555444210 00 223445555555555555543100012212223344
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccccc-CCCHHHHHHHHHHHHHHH
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSL-AHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~-~~~~~~i~~~~~~l~~~l 365 (368)
+.|..+ + .+.+...+.++||.+.++ .|+++ ..+++++++++++|++++
T Consensus 352 ~~~~~~--------------~---~~~~~~ll~~~gi~v~~~----~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 352 FCFTGL--------------K---PEQVERLTKEFSIYMTKD----GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EEECCC--------------C---HHHHHHHHHHHCEECCTT----CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred EEecCC--------------C---HHHHHHHHHhCCEeccCC----CeEEeccCChhhHHHHHHHHHHHh
Confidence 444332 1 133433445679999876 34433 246667999999999876
No 144
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=4.2e-25 Score=199.37 Aligned_cols=317 Identities=14% Similarity=0.041 Sum_probs=195.2
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
+..++.+|++++++.+++..........+...++++++++.++ +.+++++++||++|++.+++.++ .+++.|++..+
T Consensus 21 ~~~~~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~ 98 (359)
T 1svv_A 21 DYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL--RPWEAVIATQL 98 (359)
T ss_dssp SCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC--CTTEEEEEETT
T ss_pred CCcCCCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh--CCCCEEEEccc
Confidence 4567789999999999886532223456788999999999887 67899999999999999998773 46789999999
Q ss_pred CCCCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC----CCCeEEEEEcccCCCCCcccC
Q 017633 84 CYHGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~----~~~~~~~~~~~~~~~~g~~~~ 158 (368)
+|++.... .+...|..+...+.. .+.. |++++++.++++ ..+++++++++. +++|.+.+
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~-------------d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~ 162 (359)
T 1svv_A 99 GHISTHETGAIEATGHKVVTAPCP--DGKL-------------RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYT 162 (359)
T ss_dssp SHHHHSSTTHHHHTTCCEEEECCT--TSCC-------------CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCC
T ss_pred chHHHHHHHHHhcCCCeeEEEeCC--CCee-------------cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecC
Confidence 99876543 233333333222111 1111 799999999853 113788877776 45676555
Q ss_pred CHHHHHHHHHHHHHhCCEEEEehhhhchhcccC-ccccccC--CCcchhh--hhhhccCCccceeeeehHHHHHHhcCCC
Q 017633 159 KPDFLNAIRRITKENGALLIFDEVMTGFRLAYG-GAQEYFG--VTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~-~~~~~~~--~~~di~s--~sK~~~~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
.+++++|+++|++||+++|+||+|.++..+.. ......+ ..+|+++ .+|. ++..++|++++++++++.+....
T Consensus 163 -~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~~~~~~ 240 (359)
T 1svv_A 163 -KQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDALKPNARHLI 240 (359)
T ss_dssp -HHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGGGCTTHHHHH
T ss_pred -HHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcccHHHHHHHHH
Confidence 56799999999999999999999966511211 1111111 1234443 4564 33346678887887765554200
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCccc
Q 017633 234 PMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 310 (368)
Q Consensus 234 ~~~~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
.....+++.+.....+.. ..+.++ ++.+++.++++++++.| +. .+.....+..++++++.+.
T Consensus 241 -~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~l~~~L-~~---~~~~~~~~~~~~~~~~~~~------- 305 (359)
T 1svv_A 241 -KQRGALMAKGWLLGIQFE---VLMKDNLFFELGAHSNKMAAILKAGL-EA---CGIRLAWPSASNQLFPILE------- 305 (359)
T ss_dssp -HHTTCCCTTTHHHHHHHH---HHTSTTHHHHHHHHHHHHHHHHHHHH-HH---TTCCBSSCCSSSEECBEEE-------
T ss_pred -hcCCcccccchhhHHHHH---HHHhhhhHHHHHHHHHHHHHHHHHHh-cc---CCeEEccCCccceEEEEcC-------
Confidence 001122222222222222 223332 24455566666666666 32 2332222233445554431
Q ss_pred chhcccccHHHHHHHHHHHHc-CeeecCC---CCCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 311 EDAKKSETTKFARFYRGMLEE-GVYFAPS---QFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~---~~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++.+.|+++ ||.+.+. +...+|+ +...+++++++++++|++++++
T Consensus 306 -----------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 306 -----------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp -----------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred -----------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 4788999998 9998431 2234555 5667999999999999998765
No 145
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.93 E-value=2.5e-24 Score=195.95 Aligned_cols=320 Identities=16% Similarity=0.080 Sum_probs=200.7
Q ss_pred cCCCcHHHHHHHHHHHHcCCCC---CCC-----ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH-h-cCC
Q 017633 7 LFPSYLQVLAALGETMKKGTSF---GAP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-TGR 75 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~---~~~-----~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~-~-~~~ 75 (368)
.++.+|++++++.+++.+.... .++ .+...+++++++++++ +.+++++++||++|+..+++.+.. + .++
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~g 88 (382)
T 4eb5_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKG 88 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCC
Confidence 3568899999999988752111 011 2467889999999987 567999999999999999987741 1 457
Q ss_pred ceEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+.|++.+++|++........ .|..+...+... .+. .|++++++.++ ++++++++++.++++
T Consensus 89 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~i~---~~~~~v~~~~~~npt 151 (382)
T 4eb5_A 89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK-YGE-------------VDVSFIDQKLR---DDTILVSVQHANNEI 151 (382)
T ss_dssp CEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT-TSC-------------BCHHHHHHHCC---TTEEEEECCSBCTTT
T ss_pred CEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC-CCc-------------cCHHHHHHHhc---CCCeEEEEeccCCCc
Confidence 88999988887654433322 233222211111 111 18999999987 368888888888888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHH-HHHhcCC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDI-MEMVAPA 232 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~-~~~~~~~ 232 (368)
|.+.+ +++|.++|++||++ |+||+|. + .........++.+.-+.|+||.++. .++|+++++++. +..+...
T Consensus 152 G~~~~----l~~i~~l~~~~~~~-i~D~a~~-~-g~~~~~~~~~~~di~~~s~sK~~g~-~g~G~~~~~~~~~l~~~~~~ 223 (382)
T 4eb5_A 152 GTIQP----VEEISEVLAGKAAL-HIDATAS-V-GQIEVDVEKIGADMLTISSNDIYGP-KGVGALWIRKEAKLQPVILG 223 (382)
T ss_dssp CBBCC----HHHHHHHHTTSSEE-EEECTTT-B-TTBCCCHHHHTCSEEEEETGGGTCC-SSCEEEEEETTCCCCCSSCS
T ss_pred cccCC----HHHHHHHHHHCCCE-EEEcchh-c-CCcccCccccCCCEEEeehHHhcCC-CceEEEEEccccccCceecC
Confidence 98888 99999999999999 9999996 2 1111122223332234578898652 248998887653 1111100
Q ss_pred -CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee----ccceEEEEeecCCC
Q 017633 233 -GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY----ISGMFGFFFTEGPV 307 (368)
Q Consensus 233 -~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 307 (368)
+........+.+...+.++.++++.+.+ ..+.+.++.+..++.+.+.+.+.+....... .+.++++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---- 297 (382)
T 4eb5_A 224 GGQENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS---- 297 (382)
T ss_dssp SCTGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET----
T ss_pred CCccccccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC----
Confidence 0001122335566777777777776543 1233333334444444444333321111111 1445666542
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCC-----------------------CccccccC--CCHHHHHHHHHHHH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFTSLA--HSSDDIQHTITAAE 362 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------------~~~~~~~~--~~~~~i~~~~~~l~ 362 (368)
..+..++.+.|.++||.+.++.. ..+|+++. ++++++++++++|+
T Consensus 298 ----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (382)
T 4eb5_A 298 ----------YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLP 367 (382)
T ss_dssp ----------TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ----------CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 11246788999999999988641 23555544 68999999999999
Q ss_pred HHHhh
Q 017633 363 KVLRQ 367 (368)
Q Consensus 363 ~~l~~ 367 (368)
+++++
T Consensus 368 ~~~~~ 372 (382)
T 4eb5_A 368 GVIER 372 (382)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 146
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.93 E-value=3.7e-25 Score=207.81 Aligned_cols=330 Identities=10% Similarity=-0.001 Sum_probs=189.3
Q ss_pred cHHHHHHHHHHHHcCC----CCCCCC----hhHHHHHHHHHhhCC----CCCeEEEeCChHHHHHHHHHHHHHhcCC---
Q 017633 11 YLQVLAALGETMKKGT----SFGAPC----LLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGR--- 75 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~----~~~~~~----~~~~~l~~~l~~~~~----~~~~v~~~~~gt~a~~~al~~~~~~~~~--- 75 (368)
+.++.+++.+.+.... ..+.+. +..+++++.+.+..+ .++++++|+|+++++..++.++. .++
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~~ 180 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV--SGGGKS 180 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC--CCCGGG
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc--CCCCCC
Confidence 4455676766666521 112222 344445555544432 47899999999999999998663 233
Q ss_pred -ceEEEEcCCCCCCchhhhhhcCCCccccCCCCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCC--CeEEEEEcccCC
Q 017633 76 -ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKG--EIAAIILEPVVG 151 (368)
Q Consensus 76 -~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~--~~~~~~~~~~~~ 151 (368)
+.|++..+.|.... ..+...|..+........ .+.. |+++|++++++... +++++++...+|
T Consensus 181 ~d~Vlv~~p~y~~~~-~~~~~~g~~~v~~~~~~~~~~~~-------------d~~~le~~l~~~~~~~~~k~i~l~np~N 246 (498)
T 3ihj_A 181 RTGVMIPIPQYPLYS-AVISELDAIQVNYYLDEENCWAL-------------NVNELRRAVQEAKDHCDPKVLCIINPGN 246 (498)
T ss_dssp SEEEEEEESCCTHHH-HHHHHTTCEEEEEECBGGGTTBC-------------CHHHHHHHHHHHTTTSEEEEEEEESSCT
T ss_pred CCEEEEeCCCchhHH-HHHHHcCCEEEEeeccccccCCC-------------CHHHHHHHHHhhhccCCCeEEEEECCCC
Confidence 48888888887653 333443433322111111 1111 89999999985321 467666665555
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hccc--Ccccccc----C------C-Ccchhhhhhhc-c-CCcc
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQEYF----G------V-TPDLTTLGKII-G-GGLP 215 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~--~~~~~~~----~------~-~~di~s~sK~~-~-~G~~ 215 (368)
++|.+++.+ .+++|+++|++||+++|+||+|..+ +.+. ...+... + . ..-+.||||.+ | +|+|
T Consensus 247 PTG~v~s~~-~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R 325 (498)
T 3ihj_A 247 PTGQVQSRK-CIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYR 325 (498)
T ss_dssp TTCCCCCHH-HHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSC
T ss_pred CCCCcCCHH-HHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccc
Confidence 566655544 4999999999999999999999877 4322 2222111 0 0 12245899999 5 7999
Q ss_pred ceeee---ehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHH-----------Hcc-CCHHHHHHHHHHHHHHHHHH
Q 017633 216 VGAYG---GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-----------LKE-PGTYEYLNKITGELTQGIID 280 (368)
Q Consensus 216 iG~v~---~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~-----------~~~-~~~~~~~~~~~~~l~~~l~~ 280 (368)
+||++ .++++++.+... .....+.+.+++.++..+++. +.. ..+.++++++++++.+.|++
T Consensus 326 ~G~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 401 (498)
T 3ihj_A 326 GGYMEVINLHPEIKGQLVKL----LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ 401 (498)
T ss_dssp CEEEEEESCCHHHHHHHHHH----HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCHHHHHHHHHH----HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99997 588888877631 223446677787776555431 100 11223344444444444443
Q ss_pred HHHhc-CCceEEeeccceEEEEeecCCCcccchhcccccHHHHH--HHHHHHHcCeeecCCCC-------CccccccCCC
Q 017633 281 AGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR--FYRGMLEEGVYFAPSQF-------EAGFTSLAHS 350 (368)
Q Consensus 281 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~Gi~~~~~~~-------~~~~~~~~~~ 350 (368)
. ++....+..+.+.|+.+..+. ........ .+....+ ..+.|.++||.+.++.. .++|+++..+
T Consensus 402 ----~~g~~~~~p~gg~~~~~~l~~p~-~~~~~~~~-~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~ 475 (498)
T 3ihj_A 402 ----VPGIHCNPLQGAMYAFPRIFIPA-KAVEAAQA-HQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPP 475 (498)
T ss_dssp ----STTEECCCCCBSSEECCEECCCH-HHHHHHHH-TTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSC
T ss_pred ----CCCcEecCCCeEEEEEEeccCch-hhhHHHHh-cCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCC
Confidence 3 222222233444454442100 00000000 0001123 34455678999998632 2456777789
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017633 351 SDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 351 ~~~i~~~~~~l~~~l~~ 367 (368)
++++++++++|++++.+
T Consensus 476 ~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 476 VEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 147
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.93 E-value=1.4e-24 Score=195.82 Aligned_cols=315 Identities=14% Similarity=0.051 Sum_probs=189.3
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
+.++.+|++++++.+++......+.+.+...+++++++++++...++++++||++|+..+++.++ .+++.|++.++.|
T Consensus 16 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~--~~gd~vi~~~~~~ 93 (356)
T 1v72_A 16 NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMT--PPWGNIYCHPASH 93 (356)
T ss_dssp GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSC--CTTEEEEECTTSH
T ss_pred CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhc--CCCCEEEEcCccc
Confidence 44678999999998876431122234677899999999998743458999999999999998762 3567777766554
Q ss_pred CCCchh-hhhhc--CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHH-HHHcC----CCCeEEEEEcccCCCCCccc
Q 017633 86 HGHADP-FLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENN----KGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 86 ~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~~~~~----~~~~~~~~~~~~~~~~g~~~ 157 (368)
...... .+... |..+... +...+. -|++++++ ++++. .++++++++++.+ ++|.+
T Consensus 94 ~~~~~~~~~~~~~~g~~~~~v--~~~~~~-------------~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~- 156 (356)
T 1v72_A 94 INNDECGAPEFFSNGAKLMTV--DGPAAK-------------LDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSI- 156 (356)
T ss_dssp HHHSSTTHHHHHTTSCEEEEC--CCGGGC-------------CCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCC-
T ss_pred hhhhhchHHHHHhCCcEEEEe--cCCCCe-------------EcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCcc-
Confidence 432222 12322 4332221 110010 18999999 88741 1267888888854 57754
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhch-h--cccCccccccC--CCcch--hhhhhhccCCccce--eeeehHHHHHH
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTGF-R--LAYGGAQEYFG--VTPDL--TTLGKIIGGGLPVG--AYGGRRDIMEM 228 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~~-~--~g~~~~~~~~~--~~~di--~s~sK~~~~G~~iG--~v~~~~~~~~~ 228 (368)
.+.+++++|+++|++||++||+||+|..+ . .+.. ....+ ...|+ .++||+ + .|+| ++++++++++.
T Consensus 157 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~sK~-g--~~~G~g~~~~~~~~~~~ 231 (356)
T 1v72_A 157 YTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEMTWKAGVDALSFGATKN-G--VLAAEAIVLFNTSLATE 231 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTTTGGGTCCEEEECCGGG-T--CSSCEEEEESSGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHhhhhhcCCEEEEecccC-C--CcCccEEEEECHHHHhh
Confidence 45666999999999999999999999653 1 2211 11111 12233 467898 3 3666 77778887766
Q ss_pred hcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCC
Q 017633 229 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPV 307 (368)
Q Consensus 229 ~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (368)
+.... ...++... ....++.++++.+.+ +....+.++.+..++.+.+.+.+. ++....+..++++|+.+.
T Consensus 232 ~~~~~--~~~~~~~~--~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~---- 302 (356)
T 1v72_A 232 MSYRR--KRAGHLSS--KMRFLSAQIDAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD---- 302 (356)
T ss_dssp HHHHH--HHTTCCCS--STHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC----
T ss_pred HHHHh--hccCchhh--hHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC----
Confidence 54210 01121111 122233334455543 322223333334444444444332 222222344556666541
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCC--CCcccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++.+.|.++||.+.++. ...+|+ +..++++++++++++|++++++
T Consensus 303 --------------~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 303 --------------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp --------------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred --------------HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 378889999999999764 234454 4567999999999999988754
No 148
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=2.7e-24 Score=195.58 Aligned_cols=317 Identities=15% Similarity=0.083 Sum_probs=201.6
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCC--------CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH--hcCC
Q 017633 7 LFPSYLQVLAALGETMKKGTSFG--------APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA--FTGR 75 (368)
Q Consensus 7 ~g~~~~~v~~a~~~~~~~~~~~~--------~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~--~~~~ 75 (368)
.+..+|++++++.+++.+...+. ...+...+++++++++++ +.+++++++||++|+..+++.+.. ..++
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~g 88 (382)
T 4hvk_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKG 88 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGC
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCC
Confidence 34578899999999887632211 113456689999999998 678899999999999999976641 1467
Q ss_pred ceEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+.|++..+.|++........ .|..+....... .+.. |+++++++++ ++++++++++.++++
T Consensus 89 d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~i~---~~~~~v~~~~~~npt 151 (382)
T 4hvk_A 89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK-YGEV-------------DVSFIDQKLR---DDTILVSVQHANNEI 151 (382)
T ss_dssp CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT-TSCB-------------CHHHHHHHCC---TTEEEEECCSBCTTT
T ss_pred CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC-CCCc-------------CHHHHHHHhc---cCceEEEEECCCCCc
Confidence 88999888887655443332 233322211111 1111 8999999997 478899998888889
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~ 232 (368)
|.+.+ +++|.++|++||+ +|+||+|+. +. ......++.+..+.++||.++ +.++|+++++++. .+...
T Consensus 152 G~~~~----~~~i~~l~~~~~~-li~D~a~~~---~~~~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~--~~~~~ 220 (382)
T 4hvk_A 152 GTIQP----VEEISEVLAGKAA-LHIDATASV---GQIEVDVEKIGADMLTISSNDIYG-PKGVGALWIRKEA--KLQPV 220 (382)
T ss_dssp CBBCC----HHHHHHHHSSSSE-EEEECTTTB---TTBCCCHHHHTCSEEEEESGGGTS-CTTCEEEEEETTC--CCCCS
T ss_pred eeeCC----HHHHHHHHHHcCE-EEEEhHHhc---CCCCCCchhcCCCEEEEeHHHhcC-CCceEEEEEcCcc--CcCcc
Confidence 98888 9999999999999 999999962 21 122333444334557889754 3358888776543 22210
Q ss_pred ----CCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee----ccceEEEEeec
Q 017633 233 ----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY----ISGMFGFFFTE 304 (368)
Q Consensus 233 ----~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~ 304 (368)
.........+.+..++.++.++++.+.+ ..+...++.+..++.+.+.+...+....... ...++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~- 297 (382)
T 4hvk_A 221 ILGGGQENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS- 297 (382)
T ss_dssp SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-
T ss_pred cccCCCcCccccCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-
Confidence 0011112345577788777777775532 2334444444444444444433322111111 1234455441
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-----------------------CCccccc--cCCCHHHHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTS--LAHSSDDIQHTIT 359 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~~~~~~~--~~~~~~~i~~~~~ 359 (368)
..+..++.+.|.++||.++++. ...+|++ ..++++|++++++
T Consensus 298 -------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~ 364 (382)
T 4hvk_A 298 -------------YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE 364 (382)
T ss_dssp -------------TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHH
T ss_pred -------------CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHH
Confidence 1224678999999999999863 2334543 4468999999999
Q ss_pred HHHHHHhh
Q 017633 360 AAEKVLRQ 367 (368)
Q Consensus 360 ~l~~~l~~ 367 (368)
+|++++++
T Consensus 365 ~l~~~~~~ 372 (382)
T 4hvk_A 365 VLPGVIER 372 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 149
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=4e-25 Score=206.57 Aligned_cols=328 Identities=14% Similarity=0.014 Sum_probs=216.4
Q ss_pred eccCCCcHHHHHHHHHHHHcC-----C-C---CCCCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh-c
Q 017633 5 IILFPSYLQVLAALGETMKKG-----T-S---FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-T 73 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~-----~-~---~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~-~ 73 (368)
+.+|..++.+.+++.+++... . + +....+..++++++++++++ ++++|++++|+++++..+++.+... .
T Consensus 74 ~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~ 153 (465)
T 3e9k_A 74 NSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTP 153 (465)
T ss_dssp TTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCS
T ss_pred CccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccC
Confidence 456767777877777766441 0 1 11223556788999999987 6789999999999999999776322 2
Q ss_pred CCceEEEEcCCCCCCchhhh---hhcCCCccc---cCCCCC-CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEE
Q 017633 74 GRERIIKFEGCYHGHADPFL---VKAGSGVAT---LGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 146 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~ 146 (368)
++++|++..+.|++...... ...|..+.. ...+.. .+.. |+++++++++++.++++++++
T Consensus 154 ~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~-------------d~~~l~~~i~~~~~~~~lv~~ 220 (465)
T 3e9k_A 154 KRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETL-------------RIEDILEVIEKEGDSIAVILF 220 (465)
T ss_dssp SSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSC-------------CHHHHHHHHHHHGGGEEEEEE
T ss_pred CCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCcc-------------CHHHHHHHHHhcCCCeEEEEE
Confidence 35569999999987544322 223433210 001111 1111 799999999754347899999
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCC-ccceeeeehHH
Q 017633 147 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRD 224 (368)
Q Consensus 147 ~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G-~~iG~v~~~~~ 224 (368)
+++++++|.+.+ +++|.++|++||+++|+|++|+. |. ......++.+..+.+++|.+++| .++|+++++++
T Consensus 221 ~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~~---g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~ 293 (465)
T 3e9k_A 221 SGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHAV---GNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK 293 (465)
T ss_dssp ESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTTT---TTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG
T ss_pred eCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhhc---CCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHH
Confidence 998888999988 99999999999999999999962 22 12233444433345778999644 57999999888
Q ss_pred HHHHhcCCCCcccc----------------------ccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHH
Q 017633 225 IMEMVAPAGPMYQA----------------------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGII 279 (368)
Q Consensus 225 ~~~~~~~~~~~~~~----------------------~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 279 (368)
+.+.+........+ ...+++.++++++.++++.+.+ +.+.++..++.+++.+.|+
T Consensus 294 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (465)
T 3e9k_A 294 HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIK 373 (465)
T ss_dssp GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 76665421111000 0115677888888888887754 3355666666667766666
Q ss_pred HHHHh-------cCCceE----EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCcccc---
Q 017633 280 DAGKK-------AGHAIC----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--- 345 (368)
Q Consensus 280 ~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~--- 345 (368)
+.... .++... ....+.++++.+.. +..++.+.|.++||.+.......+|+
T Consensus 374 ~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---------------~~~~l~~~L~~~Gi~v~~~~~~~iRis~~ 438 (465)
T 3e9k_A 374 HNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---------------PNKDVFQELEKRGVVCDKRNPNGIRVAPV 438 (465)
T ss_dssp HHCC---------CEEECSCSSGGGBCSCEEEEECC---------------TTCCHHHHHHTTTEECEEETTTEEEEBCC
T ss_pred hhccccccccCCCCeEEeCCCCHhhcccEEEEEecC---------------CHHHHHHHHHHCCEEEecCCCCEEEEeCc
Confidence 64210 121111 11236677776631 12568899999999998654445554
Q ss_pred ccCCCHHHHHHHHHHHHHHHhh
Q 017633 346 SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 346 ~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.++++|++++++.|++++++
T Consensus 439 ~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 439 PLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTC
T ss_pred ccCCCHHHHHHHHHHHHHHHHh
Confidence 4778999999999999999854
No 150
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.93 E-value=1.2e-24 Score=199.14 Aligned_cols=313 Identities=13% Similarity=0.126 Sum_probs=204.2
Q ss_pred CcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCC-CCC-eEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 86 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~-~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~ 86 (368)
.+|++++++.+.+.. .+. ++.....+++++++++++ +.+ ++++++||++++..+++.+ ..+++.|++..++|+
T Consensus 29 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~--~~~gd~vl~~~~~~~ 104 (396)
T 2ch1_A 29 CSKRVLTAMTNTVLS--NFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNL--LEEGDRVLIAVNGIW 104 (396)
T ss_dssp CCHHHHHHTTSCCCC--TTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHH--CCTTCEEEEEESSHH
T ss_pred CCHHHHHHhcccccc--CCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHh--cCCCCeEEEEcCCcc
Confidence 345666666554321 121 122457899999999998 556 8999999999999999876 356789999999998
Q ss_pred CCch-hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 017633 87 GHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 165 (368)
Q Consensus 87 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 165 (368)
+... ......|..+....... .+. .|++++++.++++ +++++++++.++++|.+.+ +++
T Consensus 105 ~~~~~~~~~~~g~~~~~v~~~~-~~~-------------~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~ 164 (396)
T 2ch1_A 105 AERAVEMSERYGADVRTIEGPP-DRP-------------FSLETLARAIELH--QPKCLFLTHGDSSSGLLQP----LEG 164 (396)
T ss_dssp HHHHHHHHHHTTCEEEEEECCT-TSC-------------CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTT
T ss_pred cHHHHHHHHHcCCceEEecCCC-CCC-------------CCHHHHHHHHHhC--CCCEEEEECCCCCCceecC----HHH
Confidence 8531 13333344332222211 111 1899999999842 4677777777777888888 899
Q ss_pred HHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhccCCccceeeeehHHHHHHhcCCC----Ccc---
Q 017633 166 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG----PMY--- 236 (368)
Q Consensus 166 i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~~~----~~~--- 236 (368)
|.++|++||+++|+||+|. + .........+ .+|++ +++|.++++.++|++++++++++.+...+ .+.
T Consensus 165 i~~l~~~~~~~li~Dea~~-~-g~~~~~~~~~--~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T 2ch1_A 165 VGQICHQHDCLLIVDAVAS-L-CGVPFYMDKW--EIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDL 240 (396)
T ss_dssp HHHHHHHTTCEEEEECTTT-B-TTBCCCTTTT--TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCH
T ss_pred HHHHHHHcCCEEEEEcccc-c-cCCccchhhc--CcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEech
Confidence 9999999999999999996 2 1111222222 34654 56699987778899999888887764311 101
Q ss_pred -------------ccccCCCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEee----ccc
Q 017633 237 -------------QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGY----ISG 296 (368)
Q Consensus 237 -------------~~~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~ 296 (368)
.....+.+..++.++.++++.+.++ .+.++++++++++.+.|++. +.....+. .+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 316 (396)
T 2ch1_A 241 LLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM----GLDIFVKDPRHRLPT 316 (396)
T ss_dssp HHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCBSSCSGGGBCTT
T ss_pred HHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC----CCeeccCCccccCCc
Confidence 1122356777888888888765332 34566677777777777664 32211111 123
Q ss_pred eEEEEeecCCCcccchhcccccHHHHHHHHHHHHc-CeeecCCC----CCcccccc---CCCHHHHHHHHHHHHHHHhh
Q 017633 297 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTSL---AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~----~~~~~~~~---~~~~~~i~~~~~~l~~~l~~ 367 (368)
++++.+. ...+..++.+.|+++ ||.+.++. ...+|++. .++++++++++++|++++++
T Consensus 317 ~~~~~~~-------------~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 317 VTGIMIP-------------KGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp EEEEECC-------------TTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcC-------------CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 5566542 122357889999876 99999864 23455544 45899999999999998864
No 151
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=1.9e-24 Score=196.90 Aligned_cols=323 Identities=13% Similarity=0.110 Sum_probs=200.5
Q ss_pred eccCCCcHHHHHHHHHHHHcC-CCCCCCC--hhHHHHHHHHHhhCCC-----CCeEEEeCChHHHHHHHHHHHHH-hcCC
Q 017633 5 IILFPSYLQVLAALGETMKKG-TSFGAPC--LLENVLAEMVISAVPS-----IEMVRFVNSGTEACMGVLRLARA-FTGR 75 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~-~~~~~~~--~~~~~l~~~l~~~~~~-----~~~v~~~~~gt~a~~~al~~~~~-~~~~ 75 (368)
..|+++++.+.+++.+++... ..++.+. ....++++++++.++. .+++++++||++|+..+++.+.. ..++
T Consensus 7 ~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~g 86 (385)
T 2bkw_A 7 TLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPN 86 (385)
T ss_dssp EECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSC
T ss_pred eeecCCCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCC
Confidence 455555554444444444432 1233222 2456788888888762 47999999999999999987621 1456
Q ss_pred ceEEEE-cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 76 ERIIKF-EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
++|+++ ++.||......+...|..+.........+.. |+++++++++. .+++++++++.++++|
T Consensus 87 d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-------------d~~~l~~~l~~--~~~~~v~~~~~~nptG 151 (385)
T 2bkw_A 87 KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESV-------------PLELITEKLSQ--NSYGAVTVTHVDTSTA 151 (385)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCC-------------CHHHHHHHHHH--SCCSEEEEESEETTTT
T ss_pred CeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCC-------------CHHHHHHHHhc--CCCCEEEEEccCCCcC
Confidence 788887 4455554223333334433222220111111 89999999984 2567888888888889
Q ss_pred cccCCHHHHHHHHHHHHHh--CCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHH-HhcC
Q 017633 155 FIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIME-MVAP 231 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~--~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~-~~~~ 231 (368)
.+.+ +++|+++|++| |+++|+||+|+... .......++.+.-+.++||+++++.++|++++++++++ .+..
T Consensus 152 ~~~~----l~~i~~~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~ 225 (385)
T 2bkw_A 152 VLSD----LKAISQAIKQTSPETFFVVDAVCSIGC--EEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALND 225 (385)
T ss_dssp EECC----HHHHHHHHHHHCTTSEEEEECTTTTTT--SCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCH
T ss_pred eEcC----HHHHHHHHHhhCCCCEEEEECccccCC--ccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhh
Confidence 8888 99999999999 99999999996211 11122223322223467899886556799999887766 5420
Q ss_pred ------CC---------C---cccc---c-cCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHH-HHHHHhc
Q 017633 232 ------AG---------P---MYQA---G-TLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGI-IDAGKKA 285 (368)
Q Consensus 232 ------~~---------~---~~~~---~-t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l-~~~~~~~ 285 (368)
.. . .... . ..+.+..++.++.++++.+.+.+ +.++++++++++++.| ++ .
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~ 301 (385)
T 2bkw_A 226 SKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG----L 301 (385)
T ss_dssp HHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT----T
T ss_pred ccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh----c
Confidence 00 0 0000 0 13567778888878887764332 3455555556665555 43 3
Q ss_pred CCceEEe-----eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-----Cccccc-c-----CC
Q 017633 286 GHAICGG-----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTS-L-----AH 349 (368)
Q Consensus 286 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----~~~~~~-~-----~~ 349 (368)
+.....+ ..+.++++.+. + ..++.+.|.++||.+.++.. ..+|++ + .+
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~ 365 (385)
T 2bkw_A 302 QLTSVSRYPSNMSAHGLTAVYVA-------------D---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNK 365 (385)
T ss_dssp CCEESSCSSSTTBCSSCEEEECS-------------C---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSST
T ss_pred CceecccCcccccCCceEEEecC-------------C---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccC
Confidence 3221111 23566676651 1 46789999999999998743 234555 3 36
Q ss_pred CHHHHHHHHHHHHHHHhhC
Q 017633 350 SSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 350 ~~~~i~~~~~~l~~~l~~~ 368 (368)
+++|+++++++|+++++++
T Consensus 366 ~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 366 NLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp TCTHHHHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999988653
No 152
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.93 E-value=5e-25 Score=208.56 Aligned_cols=341 Identities=11% Similarity=0.022 Sum_probs=192.2
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhh-----CC------CCCeEEEeCChHHHHHHHHHHHH---H
Q 017633 6 ILFPSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISA-----VP------SIEMVRFVNSGTEACMGVLRLAR---A 71 (368)
Q Consensus 6 ~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~------~~~~v~~~~~gt~a~~~al~~~~---~ 71 (368)
..++.+|.+++++.+.+.. ..|. ++....++++.+++. +. +.++|++|+|+++++..++.++. .
T Consensus 113 ~~~~~~~~~~~al~~~~~~-~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l 190 (546)
T 2zy4_A 113 QLGLDPAAFLHEMVDGILG-CNYP-VPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGL 190 (546)
T ss_dssp TSCCCHHHHHHHHHHHHHT-CSCC-SSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCChHHHHHHHHhhhc-CCCC-CCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhc
Confidence 3466778888888887753 3332 222233344443332 21 24799999999999999987631 1
Q ss_pred hcCCceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 72 FTGRERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 72 ~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
..++|.|++.+++|+++........ +..+.........++. .|++++++.+. +++++++++..+
T Consensus 191 ~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~k~v~l~~p~ 255 (546)
T 2zy4_A 191 LKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQ------------YPDSELDKLKD---PAIKIFFCVNPS 255 (546)
T ss_dssp SCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTB------------CCHHHHGGGGS---TTEEEEEEESSC
T ss_pred CCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCC------------CCHHHHHHhhC---CCCeEEEEECCC
Confidence 2467899999999988654432211 2211111111111110 17888887764 467766666555
Q ss_pred CCCCcccCCHHHHHHHHHHH--HHhCCEEEEehhhhch-hcccCccccc-cCCCcchhhhhhhcc-CCccceeeeehHH-
Q 017633 151 GNSGFIAPKPDFLNAIRRIT--KENGALLIFDEVMTGF-RLAYGGAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRD- 224 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~--~~~~~~li~De~~~~~-~~g~~~~~~~-~~~~~di~s~sK~~~-~G~~iG~v~~~~~- 224 (368)
|++|.+++. +.+++|+++| ++||+++|+||+|.++ ..... .... .+....+.||||.++ +|+|+||++++++
T Consensus 256 NPtG~~~~~-~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s-~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 333 (546)
T 2zy4_A 256 NPPSVKMDQ-RSLERVRNIVAEHRPDLMILTDDVYGTFADDFQS-LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333 (546)
T ss_dssp SSSCBCCCH-HHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCC-HHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSC
T ss_pred CCCCccCCH-HHHHHHHHHHHhccCCcEEEEeCcchhhcccCcC-HHHhCCCCEEEEEeCccccCCCCcceEEEEECCHH
Confidence 556765554 4499999999 7899999999999987 32111 1111 122334679999998 8999999988764
Q ss_pred HHHHhcCC-------------C--------------------CccccccCCCCHHHHHHHH--HHHHHHcc-CCHHHHHH
Q 017633 225 IMEMVAPA-------------G--------------------PMYQAGTLSGNPLAMTAGI--HTLKRLKE-PGTYEYLN 268 (368)
Q Consensus 225 ~~~~~~~~-------------~--------------------~~~~~~t~~~~~~~~~a~~--~~l~~~~~-~~~~~~~~ 268 (368)
+++.+... . ......+.+.+.+.+.++. +....+.+ +.+.++++
T Consensus 334 l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r 413 (546)
T 2zy4_A 334 VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLK 413 (546)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 66554210 0 0001233456767666532 12233332 33333333
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCC----Cc-ccchhcccccHHHHHHHHHHHHcCeeecCCCC---
Q 017633 269 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP----VY-NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--- 340 (368)
Q Consensus 269 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--- 340 (368)
+..+..++.+.+.+. .++....+..+.++|+++.... .. ...|...+ ......+.+.|.++||.+.||..
T Consensus 414 ~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~-~~~~~~l~~ll~~~gV~v~pG~~F~~ 491 (546)
T 2zy4_A 414 QLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQ-SSTGDMLFRIADETGIVLLPGRGFGS 491 (546)
T ss_dssp HHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHH-CCHHHHHHHHHHHHSCCCEESSCTTC
T ss_pred HHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhcc-CCHHHHHHHHHHHCCEEEeCccccCC
Confidence 333333333333222 2222122344556677753100 00 00000000 01224466777889999999742
Q ss_pred --CccccccCC-CHHHHHHHHHHHHHHHhh
Q 017633 341 --EAGFTSLAH-SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 341 --~~~~~~~~~-~~~~i~~~~~~l~~~l~~ 367 (368)
.++|+++.. +++++++++++|++++.+
T Consensus 492 ~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 521 (546)
T 2zy4_A 492 NRPSGRASLANLNEYEYAAIGRALRKMADE 521 (546)
T ss_dssp SSCEEEEESSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 245776665 899999999999998754
No 153
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.92 E-value=2.2e-24 Score=196.88 Aligned_cols=321 Identities=9% Similarity=0.016 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHcCCCC-CCCChhHHHHHHHHHhhC-C-----CCCeEEEeCChHHHHHHHHHHHHHh--cCCceEEEEc
Q 017633 12 LQVLAALGETMKKGTSF-GAPCLLENVLAEMVISAV-P-----SIEMVRFVNSGTEACMGVLRLARAF--TGRERIIKFE 82 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~-~-----~~~~v~~~~~gt~a~~~al~~~~~~--~~~~~vi~~~ 82 (368)
|.|++|..+.++....+ |.|.....+|++++++++ + +......|.+||.|+..++.++... .++|.|++.+
T Consensus 65 ~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~ 144 (420)
T 4h51_A 65 RVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSD 144 (420)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 56888877776665444 667788889999998865 2 1234566889999999988655432 4678899999
Q ss_pred CCCCCCchhhhhhcCCCccccCC-CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
++|..+...+...++..+....+ ....... |.+.+.+.+.+.++++++++..+.+|++|... +.+
T Consensus 145 P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~-------------d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~-~~~ 210 (420)
T 4h51_A 145 PTWPNHYGVVKAAGWKNICTYAYYDPKTVSL-------------NFEGMKKDILAAPDGSVFILHQCAHNPTGVDP-SQE 210 (420)
T ss_dssp SCCTHHHHHHHHTTCCCEEEEECEEGGGTEE-------------CHHHHHHHHHHSCSSCEEEEESSSCTTTCCCC-CHH
T ss_pred CCchhHHHHHHHcCCeEEEeeccccccccCC-------------CHHHHHHHHhccCCCcEEEEeCCCCCCCCCCC-CHH
Confidence 88876544333333333322111 1111111 78888888876656777777766666666555 555
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhch-hccc---Ccccc-ccCC---Ccchhhhhhhcc-CCccceeeeehHHHHHH---h
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQE-YFGV---TPDLTTLGKIIG-GGLPVGAYGGRRDIMEM---V 229 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~-~~g~---~~~~~-~~~~---~~di~s~sK~~~-~G~~iG~v~~~~~~~~~---~ 229 (368)
++++|+++|+++++++|+||+|.+| ..+. .+... ..+. ..-+.||||.++ .|||+||+++..+..+. +
T Consensus 211 ~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 290 (420)
T 4h51_A 211 QWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADV 290 (420)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHH
Confidence 5999999999999999999999988 4321 11111 1111 222458999999 89999998664322111 1
Q ss_pred c-CCCCccccccCCCCHHHHHHHHHHHHH--Hc----c--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEE
Q 017633 230 A-PAGPMYQAGTLSGNPLAMTAGIHTLKR--LK----E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 300 (368)
Q Consensus 230 ~-~~~~~~~~~t~~~~~~~~~a~~~~l~~--~~----~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (368)
. ...........+++..++.++...+.. +. + +.++++++++++.+.+.|++.+....+.......|.|.+.
T Consensus 291 ~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~ 370 (420)
T 4h51_A 291 KSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFL 370 (420)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEEC
T ss_pred HHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEec
Confidence 1 000111223334556666665555431 00 0 1233444444444444444432111111112233444433
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccccccC-CCHHHHHHHHHHHHHHHhhC
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~ 368 (368)
-+ . .+.++.|.++||++.+++ |++++ .+++.+++++++|.++++++
T Consensus 371 gl--------------s----~e~v~~L~e~~Vy~~~~g----Ris~Agl~~~ni~~~a~aI~~vvr~i 417 (420)
T 4h51_A 371 GL--------------S----KAQCEYCQNHNIFITVSG----RANMAGLTHETALMLAQTINDAVRNV 417 (420)
T ss_dssp CC--------------C----HHHHHHHHHTTEECCTTC----EEEGGGCCHHHHHHHHHHHHHHHC--
T ss_pred Cc--------------C----HHHHHHHHhCCEEEcCCC----EEEeccCCHHHHHHHHHHHHHHHHHh
Confidence 22 1 234577889999998876 66554 59999999999999998653
No 154
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=3.7e-24 Score=192.36 Aligned_cols=316 Identities=16% Similarity=0.106 Sum_probs=199.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 89 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 89 (368)
.+|++++++.+.... ...+++.+...+|+++++++++. +.+++++||++|+..+++.+ ..++|.|++..++|....
T Consensus 16 p~~~~~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g~-~~~~~~~~gt~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~ 91 (347)
T 1jg8_A 16 PTEEMRKAMAQAEVG-DDVYGEDPTINELERLAAETFGK-EAALFVPSGTMGNQVSIMAH--TQRGDEVILEADSHIFWY 91 (347)
T ss_dssp CCHHHHHHHHTCCCC-CGGGTCCHHHHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHH--CCTTCEEEEETTCHHHHS
T ss_pred CCHHHHHHHhcCCCC-CcccCCChHHHHHHHHHHHHhCC-ceEEEecCcHHHHHHHHHHh--cCCCCEEEEcCcchhhhc
Confidence 678888888654322 12234567788999999999863 46788889999999888765 346788999887765422
Q ss_pred h--hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCC-CcccCCHHHH
Q 017633 90 D--PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNS-GFIAPKPDFL 163 (368)
Q Consensus 90 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~-g~~~~~~~~l 163 (368)
. ......|..+... . ...+.. |+++++++++.. .++++++++++++|++ |.+.+ .+.+
T Consensus 92 ~~~~~~~~~g~~~~~v-~-~~~~~~-------------d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~-~~~l 155 (347)
T 1jg8_A 92 EVGAMAVLSGVMPHPV-P-GKNGAM-------------DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVP-LENI 155 (347)
T ss_dssp STTHHHHHTCCEEEEE-C-EETTEE-------------CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCC-HHHH
T ss_pred cccchhhccCeEEEEe-c-CCCCcc-------------CHHHHHHHhccccccccCceEEEEeccccccCCccCc-HHHH
Confidence 2 1223333322211 1 001101 899999998742 1268888888777777 65554 4459
Q ss_pred HHHHHHHHHhCCEEEEehhhhch---hcccCcccccc--CCCcchhhhhhhccCCcccee-eeehHHHHHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYF--GVTPDLTTLGKIIGGGLPVGA-YGGRRDIMEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~---~~g~~~~~~~~--~~~~di~s~sK~~~~G~~iG~-v~~~~~~~~~~~~~~~~~~ 237 (368)
++|+++|++||+++|+||+|... ..+. ....+ +...-++++||++++ ++|+ ++.++++++.+..... ..
T Consensus 156 ~~i~~~a~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~l~~--~~G~~~~~~~~~~~~~~~~~~-~~ 230 (347)
T 1jg8_A 156 KEICTIAKEHGINVHIDGARIFNASIASGV--PVKEYAGYADSVMFCLSKGLCA--PVGSVVVGDRDFIERARKARK-ML 230 (347)
T ss_dssp HHHHHHHHHHTCEEEEEETTHHHHHHHHCC--CHHHHHHTCSEEEEESSSTTCC--SSCEEEEECHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHCCCEEEeehhhhhcchhhcCC--ChHHhcccccEEEEecccccCC--CceEEEEcCHHHHHHHHHHHH-Hc
Confidence 99999999999999999987421 1111 11111 222124579999975 3674 5668877766542111 12
Q ss_pred cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccc
Q 017633 238 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 238 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
+++...+.+.++++..+++... + ..++..++++++++.|++. ..... ..+..++++|+.+.. .
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~l~~~L~~~--~~~~~-~~~~~~~~~~~~~~~------------~ 293 (347)
T 1jg8_A 231 GGGMRQAGVLAAAGIIALTKMV-D-RLKEDHENARFLALKLKEI--GYSVN-PEDVKTNMVILRTDN------------L 293 (347)
T ss_dssp TCCCSSTHHHHHHHHHHHHHSS-T-THHHHHHHHHHHHHHHHHH--TCBCC-GGGCCSSEEEEECTT------------S
T ss_pred CCchhHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhc--Cceec-cCCCcceEEEEEccc------------c
Confidence 2333445566666666776432 2 3445556777888888765 12111 112345677776521 0
Q ss_pred cHHHHHHHHHHHHcCeeecCCCCCccccc--cCCCHHHHHHHHHHHHHHHhh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~--~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|.++||.+++++...+|++ ..++++|+++++++|++++.+
T Consensus 294 ~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 294 KVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp SSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 12257899999999999998765556654 556999999999999998764
No 155
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.92 E-value=9.2e-24 Score=193.94 Aligned_cols=313 Identities=12% Similarity=0.075 Sum_probs=193.1
Q ss_pred cHHHHHHHHHHHHcC--CCCCC-----CChh---HH-HHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 11 YLQVLAALGETMKKG--TSFGA-----PCLL---EN-VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~--~~~~~-----~~~~---~~-~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
+|++++++.+++.+. ..|.. ..+. .+ ..+++++++++-....+++++|++|+..+++.+ ..+++.|+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~--~~~gd~Vl 113 (407)
T 2dkj_A 36 SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMAL--MEPGDTLM 113 (407)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH--CCTTCEEE
T ss_pred CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHh--cCCCCEEE
Confidence 899999999988641 11210 1111 12 123478888763334345557899999999877 45678999
Q ss_pred EEcCCCCCCc--hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEE-cccCCCCCcc
Q 017633 80 KFEGCYHGHA--DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFI 156 (368)
Q Consensus 80 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~-~~~~~~~g~~ 156 (368)
+..++|++.. ...+...|..+....++... +. ...|++++++.++.. +++++++ +|+++ ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~---~~~d~~~l~~~l~~~--~~~~v~~~~p~~~---~~ 177 (407)
T 2dkj_A 114 GMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP--------DT---ELIDLEEVRRLALEH--RPKVIVAGASAYP---RF 177 (407)
T ss_dssp EECGGGTCCGGGTCTTSHHHHHSEEEEECCCT--------TT---SSCCHHHHHHHHHHH--CCSEEEECCSSCC---SC
T ss_pred EecccccCccchHHHHHhcCceEEEEecCCCc--------cc---CccCHHHHHHHHhhc--CCeEEEEeccccC---CC
Confidence 9999888763 12222222211111111000 00 011899999999742 4566666 55553 44
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEehhhhc-h-hcccCccccccCCCcchh--hhhhhccCCccceeeeeh-HHHHHHhcC
Q 017633 157 APKPDFLNAIRRITKENGALLIFDEVMTG-F-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGR-RDIMEMVAP 231 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~De~~~~-~-~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~-~~~~~~~~~ 231 (368)
.+ +++|.++|++||+++|+||+|++ + ..+.... ... .+|++ |+||+++ |+|+||++++ +++++.+..
T Consensus 178 ~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~~~s~sK~l~-g~~~G~~~~~~~~~~~~l~~ 249 (407)
T 2dkj_A 178 WD----FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVVTSTTHKTLR-GPRGGLILSNDPELGKRIDK 249 (407)
T ss_dssp CC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEEEEESSGGGC-CCSCEEEEESCHHHHHHHHH
T ss_pred CC----HHHHHHHHHHcCCEEEEEccccccccccCccCC--ccc-cccEEEEeccccCC-CCCceEEEECCHHHHHHHHh
Confidence 55 99999999999999999999975 5 4443211 111 14554 8999886 6688999998 788877653
Q ss_pred CCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecCCC
Q 017633 232 AGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPV 307 (368)
Q Consensus 232 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 307 (368)
... .+.+.+.++..++++.++++.+.. +++.++++++++++++.|++. +..... +..++++++.+...
T Consensus 250 ~~~--~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~-- 321 (407)
T 2dkj_A 250 LIF--PGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR----GYRIVTGGTDNHLFLVDLRPK-- 321 (407)
T ss_dssp HHT--TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT----TCEEGGGSCSSSEEEEECGGG--
T ss_pred hhc--ccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC----CceeecCCCCceEEEEECccc--
Confidence 111 223334566666677777776532 334555666666666666553 332211 24567777776310
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCC----------Ccccccc------CCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFTSL------AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----------~~~~~~~------~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|.++||.+.++.. ..+|++. ..+++++++++++|++++.+
T Consensus 322 ----------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 322 ----------GLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp ----------TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ----------CCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 11246788899999999988642 1234443 27999999999999998754
No 156
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.92 E-value=8e-24 Score=193.75 Aligned_cols=285 Identities=12% Similarity=0.037 Sum_probs=189.5
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhh---hhcCCCccccCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPD 107 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 107 (368)
+.+...+++++++++++.. ++++++||++|+..+++.+ ..+++.|++..+.|++...... ...|
T Consensus 62 ~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~~~~l~~~--~~~gd~vi~~~~~~~~~~~~~~~~~~~~g---------- 128 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGE-AGLATASGISAITTTLLTL--CQQGDHIVSASAIYGCTHAFLSHSMPKFG---------- 128 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHH--CCTTCEEEEESSSCHHHHHHHHTHHHHTT----------
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCCcccHHHHHHHHHHHcC----------
Confidence 5788899999999998743 6677778999999999876 3467899999998887543331 2222
Q ss_pred CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchh
Q 017633 108 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 187 (368)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~ 187 (368)
.+++.++.+|++++++.++ ++++++++++.++++|.+.+ +++|+++|++||+++|+||+|....
T Consensus 129 ---------~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~ 192 (398)
T 2rfv_A 129 ---------INVRFVDAAKPEEIRAAMR---PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSPY 192 (398)
T ss_dssp ---------CEEEEECTTSHHHHHHHCC---TTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred ---------CEEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 2344455558999999987 47889999888888898887 9999999999999999999997441
Q ss_pred cccCccccccCCCcchhhhhhhcc-CCccc-eeeeehHHHHH-HhcCCCCccccc-cCCCCHHHHHHHHHHHHHHccCCH
Q 017633 188 LAYGGAQEYFGVTPDLTTLGKIIG-GGLPV-GAYGGRRDIME-MVAPAGPMYQAG-TLSGNPLAMTAGIHTLKRLKEPGT 263 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~sK~~~-~G~~i-G~v~~~~~~~~-~~~~~~~~~~~~-t~~~~~~~~~a~~~~l~~~~~~~~ 263 (368)
.+. ...++.+..+.|+||.++ +|+|+ ||+++++++++ .+.. ..... +.+.+++.++++.++++.+ +.+
T Consensus 193 ~~~---~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 264 (398)
T 2rfv_A 193 CQQ---PLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV---GLKDITGGCMSPFNAWLTLRGVKTL--GIR 264 (398)
T ss_dssp TCC---GGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT---HHHHTTCCCCCHHHHHHHHHHHTTH--HHH
T ss_pred cCC---chhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH---HHHhCCCCCCCHHHHHHHHhhhhhH--HHH
Confidence 111 112344444578999998 58898 99999888776 5542 22333 4567888888888887643 234
Q ss_pred HHHHHHHHHHHHHHHHHHH----------HhcCCceE----EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH
Q 017633 264 YEYLNKITGELTQGIIDAG----------KKAGHAIC----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 329 (368)
Q Consensus 264 ~~~~~~~~~~l~~~l~~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (368)
.++..++.+.+.+.|++.. ...+.... ..+.++++++.+.. ...+...+.+.+.
T Consensus 265 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~------------~~~~~~~l~~~~~ 332 (398)
T 2rfv_A 265 MERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG------------GLEAGRRMINSVE 332 (398)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT------------HHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC------------CHHHHHHHHHhCC
Confidence 4555666666666665421 00000000 01357777877631 1123344555555
Q ss_pred HcCeeecCCCC---------------------------Ccccc--ccCCCHHHHHHHHHHHHHH
Q 017633 330 EEGVYFAPSQF---------------------------EAGFT--SLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 330 ~~Gi~~~~~~~---------------------------~~~~~--~~~~~~~~i~~~~~~l~~~ 364 (368)
..|+.+++|+. ..+|+ ....+++++++++++|+++
T Consensus 333 ~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 333 LCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 55777766521 22343 3455778888888877654
No 157
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=3.8e-24 Score=194.59 Aligned_cols=300 Identities=14% Similarity=0.049 Sum_probs=194.9
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh-hcCCC--ccccCCCCC-
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV-KAGSG--VATLGLPDS- 108 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~- 108 (368)
+...++++.+++.++..+.+++++|||+|++.+++.+ .++++||++.++||+.....+. ..+.+ +.....+..
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~---~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQL---TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHH---CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhC---CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccc
Confidence 4566778888888874478999999999999988654 4788999999999886443322 22321 111111100
Q ss_pred -CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchh
Q 017633 109 -PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 187 (368)
Q Consensus 109 -~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~ 187 (368)
.... ......|++++++++++. +++++++..+++++|.+.+ .+++++|+++|++||+++|+|++++
T Consensus 112 ~~~~~-------~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~G~~~~-~~~l~~i~~~~~~~~~~li~D~~~~--- 178 (379)
T 3ke3_A 112 DTEAP-------KPFAPVDIETAVAKIKED--KSAIVYAPHVETSSGIILS-EEYIKALSEAVHSVGGLLVIDCIAS--- 178 (379)
T ss_dssp CCSSC-------CCEECCCHHHHHHHHHHH--TCSEEEEESEETTTTEECC-HHHHHHHHHHHHHTTCEEEEECTTC---
T ss_pred ccccc-------CCCCCCCHHHHHHHHhhc--CCcEEEEEeecCCCceeCC-HHHHHHHHHHHHHcCCEEEEEeccc---
Confidence 0000 000112899999999642 5667777777777776555 5569999999999999999999986
Q ss_pred cccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC--Cccc-----------------cccCCCCHHHH
Q 017633 188 LAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG--PMYQ-----------------AGTLSGNPLAM 248 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~--~~~~-----------------~~t~~~~~~~~ 248 (368)
.+..+....++.+..+.+++|+++++.++|++++++++++.+.... .++. ..+++.+...+
T Consensus 179 g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~ 258 (379)
T 3ke3_A 179 GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSL 258 (379)
T ss_dssp TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHH
T ss_pred CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHH
Confidence 2334455566776667788899987778999999999888776421 1111 01236788888
Q ss_pred HHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceEEee--ccc-eEEEEeecCCCcccchhcccccHHHH
Q 017633 249 TAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGY--ISG-MFGFFFTEGPVYNFEDAKKSETTKFA 322 (368)
Q Consensus 249 ~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
+++.++++.+.++ .+.++..++++++++.|+++ ++...... ..+ +..+.. +... .
T Consensus 259 ~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----g~~~~~~~~~~~~~i~~~~~--------------~~~~-~ 319 (379)
T 3ke3_A 259 RQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK----GIESVAAEGFEAPGVVVSYT--------------ERDD-M 319 (379)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCBSBCTTCBCSSEEEEEC--------------SCHH-H
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCEecCCccccCceEEEEcc--------------CCcc-h
Confidence 8888999887654 34455556666666666553 33211111 122 222221 1111 2
Q ss_pred HHHHHHHHcCeeecCCCC---------Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 323 RFYRGMLEEGVYFAPSQF---------EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 323 ~~~~~l~~~Gi~~~~~~~---------~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.+.|.++||.+.++.. ..+|+ +..++++|+++++++|++++++
T Consensus 320 ~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 320 HKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp HSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 236778899999988742 23444 4457999999999999998865
No 158
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=4.8e-23 Score=188.01 Aligned_cols=311 Identities=12% Similarity=0.042 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
|++++++.+++......+++.+...++++.++++++..+.++++ ||++|++.+++.+. ..+++.|++..++|++....
T Consensus 17 ~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~-sGt~al~~~l~~l~-~~~gd~Vi~~~~~~~~~~~~ 94 (388)
T 1b9h_A 17 DAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVT-NGTHALELALQVMG-VGPGTEVIVPAFTFISSSQA 94 (388)
T ss_dssp HHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEES-CHHHHHHHHHHHTT-CCTTCEEEEESSSCTHHHHH
T ss_pred HHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCCeEEEeC-CHHHHHHHHHHHcC-CCCcCEEEECCCccHHHHHH
Confidence 89999999998764222345677899999999999754555555 68999999997652 24678999999998886544
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
. ...|..+.........+.. |+++|+++++ +++++++ |++ ++|.+.+ +++|.++|+
T Consensus 95 ~-~~~g~~~~~v~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~--~~n-~tG~~~~----l~~i~~la~ 150 (388)
T 1b9h_A 95 A-QRLGAVTVPVDVDAATYNL-------------DPEAVAAAVT---PRTKVIM--PVH-MAGLMAD----MDALAKISA 150 (388)
T ss_dssp H-HHTTCEEEEECBCTTTCCB-------------CHHHHHHHCC---TTEEEEC--CBC-GGGCCCC----HHHHHHHHH
T ss_pred H-HHcCCEEEEEecCCCcCCC-------------CHHHHHHhcC---cCceEEE--EeC-CccCcCC----HHHHHHHHH
Confidence 3 3333333221111111111 8999999986 3677766 444 4677776 999999999
Q ss_pred HhCCEEEEehhhhc-h-hcccCccccccCCCcchhhhhhhcc-CCccceeeeehHH-H--HHHhc---CCCC------c-
Q 017633 172 ENGALLIFDEVMTG-F-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRD-I--MEMVA---PAGP------M- 235 (368)
Q Consensus 172 ~~~~~li~De~~~~-~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~-~--~~~~~---~~~~------~- 235 (368)
+||++||+||+|+. + ..+. ....++ ..++.||||.++ +|.++|+++++++ + ++.+. ..+. +
T Consensus 151 ~~~~~li~D~a~~~g~~~~~~--~~~~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (388)
T 1b9h_A 151 DTGVPLLQDAAHAHGARWQGK--RVGELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYF 227 (388)
T ss_dssp HHTCCBCEECTTCTTCEETTE--EGGGSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCC
T ss_pred HcCCEEEEecchhcCCccCCe--eccccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccce
Confidence 99999999999963 3 2222 122233 345678885544 3458999988764 5 45442 1110 0
Q ss_pred --cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE------eeccceEEEEeecCCC
Q 017633 236 --YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG------GYISGMFGFFFTEGPV 307 (368)
Q Consensus 236 --~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 307 (368)
..+.++..+++.++++...++.+ ++..++++++++++.+.|+++ .++.... ...++++++.+...
T Consensus 228 ~~~~g~~~~~~~~~~a~~~~~~~~l--~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (388)
T 1b9h_A 228 HKIAGSNMRLNEFSASVLRAQLARL--DEQIAVRDERWTLLSRLLGAI---DGVVPQGGDVRADRNSHYMAMFRIPGL-- 300 (388)
T ss_dssp CCSCCCBCBCBHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTS---TTCEECCCCTTCCBCCCSEEEEECTTC--
T ss_pred eecccccCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccC---CCccccCCCcCCCccceEEEEEEeCCc--
Confidence 00122335666666555544433 224455555555555555442 1221111 12345677765210
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCCCc---------------------------------ccc--ccCC-CH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---------------------------------GFT--SLAH-SS 351 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~---------------------------------~~~--~~~~-~~ 351 (368)
...+..++.+.|.++||.++++..+. +++ ...+ ++
T Consensus 301 ---------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~ 371 (388)
T 1b9h_A 301 ---------TEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGE 371 (388)
T ss_dssp ---------CHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCH
T ss_pred ---------CcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCH
Confidence 11346789999999999998764321 122 2356 89
Q ss_pred HHHHHHHHHHHHHHhh
Q 017633 352 DDIQHTITAAEKVLRQ 367 (368)
Q Consensus 352 ~~i~~~~~~l~~~l~~ 367 (368)
+|++++++.|++++++
T Consensus 372 edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 372 PELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998865
No 159
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.92 E-value=1.9e-24 Score=198.10 Aligned_cols=314 Identities=14% Similarity=0.059 Sum_probs=179.5
Q ss_pred CCCcHHHHHHHHHHHHcCCC-----CC---CCChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh--cCCc
Q 017633 8 FPSYLQVLAALGETMKKGTS-----FG---APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TGRE 76 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~-----~~---~~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~--~~~~ 76 (368)
+..+|++++++.+++..... +. ...+...+++++++++++ +++++++++||++|+..+++.+..+ .++|
T Consensus 30 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd 109 (400)
T 3vax_A 30 TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGR 109 (400)
T ss_dssp SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCC
Confidence 35688999999998864211 10 123457889999999998 6689999999999999999766411 3567
Q ss_pred -eEEEEcCCCCCCchhhhhh--cCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 77 -RIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 77 -~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
.|++....|++........ .|..+...+... .+.. |+++++++++ ++++++++++.++++
T Consensus 110 ~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~l~~~i~---~~~~~v~~~~~~npt 172 (400)
T 3vax_A 110 RHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP-SGRI-------------SVEGVMERLR---PDTLLVSLMHVNNET 172 (400)
T ss_dssp CEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT-TCCC-------------CHHHHHTTCC---TTEEEEECCSBCTTT
T ss_pred CEEEECccccHhHHHHHHHHHhcCCeEEEEccCC-CCCc-------------CHHHHHHhcC---CCceEEEEECCCCCc
Confidence 8888877776654433333 232222211111 1111 8999999887 478899999888889
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhccCCccceeee-ehHH-HH---
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYG-GRRD-IM--- 226 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~-~~~~-~~--- 226 (368)
|.+.+ +++|.++|++||+++|+||+|+.. .. ..+.... +|+ .++||.++ +.++|+++ ++++ +.
T Consensus 173 G~~~~----l~~i~~la~~~~~~li~D~a~~~~---~~-~~~~~~~-~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~ 242 (400)
T 3vax_A 173 GVIQP----VAELAQQLRATPTYLHVDAAQGYG---KV-PGDLTTP-IDMISISGHKIGA-PKGVGALVTRRREEMDDER 242 (400)
T ss_dssp CBBCC----HHHHHHHHTTSSCEEEEECTTTTT---TS-GGGGGSC-CSEEEEETGGGTS-CSSCEEEEECBCSSSTTCB
T ss_pred eeeCc----HHHHHHHHHhcCCEEEEEhhhhcC---CC-CcChhhc-CcEEEEeHHHhCC-CCceEEEEEecchhccccc
Confidence 98888 999999999999999999999621 11 1111122 555 46779544 34578877 7651 11
Q ss_pred HHhcC----CCCccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEee---ccce
Q 017633 227 EMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY---ISGM 297 (368)
Q Consensus 227 ~~~~~----~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~ 297 (368)
..+.. ..........+.+..+++++.++++.+.+ +.+.++++++++++++.|+ ..+....... .+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~ 318 (400)
T 3vax_A 243 VPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA----STSFQVNGDQDHVVPHI 318 (400)
T ss_dssp CCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT----TTTCEECSCTTSBCTTE
T ss_pred cccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC----CCCEEEeCCcccCCCCE
Confidence 11111 01111122345677788777788876643 2334444445555544444 1222111111 1245
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-----------------------CCcccccc---CCCH
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTSL---AHSS 351 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~~~~~~~~---~~~~ 351 (368)
+++.+. ..+..++.+.|. +||.++++. ...+|+++ ..++
T Consensus 319 ~~~~~~--------------~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~ 383 (400)
T 3vax_A 319 LNLSFE--------------DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATD 383 (400)
T ss_dssp EEEECT--------------TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----
T ss_pred EEEEeC--------------CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCH
Confidence 555432 123478899999 999998853 13345444 5689
Q ss_pred HHHHHHHHHHHHHHhh
Q 017633 352 DDIQHTITAAEKVLRQ 367 (368)
Q Consensus 352 ~~i~~~~~~l~~~l~~ 367 (368)
+++++++++|++++++
T Consensus 384 e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 384 LDVEELARGVAKLKPS 399 (400)
T ss_dssp ----------------
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 160
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.92 E-value=2.9e-23 Score=196.29 Aligned_cols=318 Identities=14% Similarity=0.050 Sum_probs=196.8
Q ss_pred CcHHHHHHHHHHHHcC----CC-CC-C--CChhHHHHHHHHHhhCCCC---CeE--EEeCChHHHHHHHHHHHHHhc---
Q 017633 10 SYLQVLAALGETMKKG----TS-FG-A--PCLLENVLAEMVISAVPSI---EMV--RFVNSGTEACMGVLRLARAFT--- 73 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~----~~-~~-~--~~~~~~~l~~~l~~~~~~~---~~v--~~~~~gt~a~~~al~~~~~~~--- 73 (368)
+++.+.+++.+++... .. +. + ..+.+.++.+++++.++-. +++ ++++||++|+..++++++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~ 187 (514)
T 3mad_A 108 GDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARAT 187 (514)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhh
Confidence 5677777776665431 11 11 1 1245567778889988732 577 999999999999998886543
Q ss_pred ---CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccC
Q 017633 74 ---GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 150 (368)
Q Consensus 74 ---~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~ 150 (368)
+++.|++..++|++. ...+...|.++....... .+.. |+++|+++++ ++++++++++.+
T Consensus 188 ~g~~~d~Vi~~~~~~~~~-~~~~~~~G~~v~~v~~~~-~~~~-------------d~~~Le~~i~---~~~~~v~~~~~~ 249 (514)
T 3mad_A 188 KGITAPEAVVPVSAHAAF-DKAAQYFGIKLVRTPLDA-DYRA-------------DVAAMREAIT---PNTVVVAGSAPG 249 (514)
T ss_dssp HCCSSCEEEEETTSCTHH-HHHHHHHTCEEEEECBCT-TSCB-------------CHHHHHHHCC---TTEEEEEEETTC
T ss_pred cCCCCCeEEEeCccchHH-HHHHHHcCCeeEEeeeCC-CCCC-------------CHHHHHHHhc---cCCEEEEEeCCC
Confidence 127888888777764 333444444433322211 1111 8999999997 468888888888
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-h-----ccc---CccccccCCCcchhhhhhhccCCccceeeee
Q 017633 151 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R-----LAY---GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGG 221 (368)
Q Consensus 151 ~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~-----~g~---~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~ 221 (368)
+++|.+.+ +++|+++|++||++||+||+|.++ . .|. .+.....+.+..+.+++|.+.+|.++|++++
T Consensus 250 nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~ 325 (514)
T 3mad_A 250 YPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILY 325 (514)
T ss_dssp TTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEE
T ss_pred CCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEE
Confidence 88898888 999999999999999999999875 2 122 2223344544445577899888889999988
Q ss_pred hHHHHHHhcCC------CCccccc--cCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 222 RRDIMEMVAPA------GPMYQAG--TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 222 ~~~~~~~~~~~------~~~~~~~--t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
+++........ +...... ..+.+.....++.++++.+.. +++.++..++++++++.|++ .+....
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~ 401 (514)
T 3mad_A 326 RRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA----IPSLKI 401 (514)
T ss_dssp SSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----STTCEE
T ss_pred eCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEE
Confidence 76554432210 0000011 112333334445555555433 23455556666666666554 321112
Q ss_pred EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-Ccccc---ccCCCHHHHHHHHHHHHHHHh
Q 017633 291 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT---SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~~~~---~~~~~~~~i~~~~~~l~~~l~ 366 (368)
......++++.. ...+..++.+.|.++||.+..... ..+++ ...++++++++++++|+++++
T Consensus 402 ~~~~~~~~~~~~--------------~~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 402 LGDPLWVIAVAS--------------DELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp SSCCSSEEEEEC--------------SSSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred eCCCeEEEEEeC--------------CCCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 222244555543 112347899999999998843221 22333 245578999999999999885
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 468 ~ 468 (514)
T 3mad_A 468 Q 468 (514)
T ss_dssp H
T ss_pred H
Confidence 4
No 161
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.91 E-value=3.6e-24 Score=193.23 Aligned_cols=321 Identities=13% Similarity=0.024 Sum_probs=187.4
Q ss_pred eeccCC-CcHHHHHHHHHHHHcC-----CCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 4 LIILFP-SYLQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 4 ~~~~g~-~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
+.++|. .+|.+.+++.+.++.. ...+.+.+...+|+++++++++.. ..++++||++|+..+++.+... +++.
T Consensus 12 ~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~-~~i~~~~G~~a~~~al~~~~~~-gd~~ 89 (357)
T 3lws_A 12 TTGQISGHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLGMD-DAVFFPSGTMAQQVALRIWSDE-TDNR 89 (357)
T ss_dssp CSEESSBSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHHHHH-HTCC
T ss_pred hcccccCCCCCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhCCC-cEEEecCcHHHHHHHHHHHhhc-CCCc
Confidence 345555 6666777777766541 122334567889999999998753 4455578999999998776543 2322
Q ss_pred EEEEcCCCCCCchh---hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC-
Q 017633 78 IIKFEGCYHGHADP---FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS- 153 (368)
Q Consensus 78 vi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~- 153 (368)
+++.++.+|..... .....+..... ++...+. -|+++++++. + ++++++++.+|++
T Consensus 90 ~vi~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~~~~-------------~d~~~l~~~~----~-~~~v~~~~p~np~~ 149 (357)
T 3lws_A 90 TVAYHPLCHLEIHEQDGLKELHPIETIL--VGAADRL-------------MTLDEIKALP----D-IACLLLELPQREIG 149 (357)
T ss_dssp EEEECTTCHHHHSSTTHHHHHSSCEEEE--CSCTTSC-------------CCHHHHHTCC----S-CSEEEEESSBGGGT
T ss_pred EEEecccceeeeeccchhhhccCcEEEE--ecCCCCC-------------cCHHHHhcCc----C-cceEEEEcccccCC
Confidence 55555555432221 12222332221 1111111 1788888762 2 5666666665554
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhc-h--hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhc
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTG-F--RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA 230 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~-~--~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~ 230 (368)
|. ..+.+++++|+++|++||++||+||+|.. . ..+.....-......-+.|+||++++... |++++++++++.+.
T Consensus 150 G~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~ 227 (357)
T 3lws_A 150 GV-APAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG-AILAGPAAFCQTAR 227 (357)
T ss_dssp SB-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHH
T ss_pred ce-eCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce-EEEEcCHHHHHHHH
Confidence 55 55566699999999999999999999852 1 22221100001111124589999964323 88899998887775
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEEeecCCCcc
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 309 (368)
..... .+.+.......++++.++++.. .+..+++.++++++++.|+++ .+... ..+..++++|+.+...
T Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~---- 297 (357)
T 3lws_A 228 IWKRR-YGGDLISLYPYIVSADYYYELR--KDRMGQYYEQAKQLAEQFNAL---PGVHTTPEVPVSNMFHLHFDGQ---- 297 (357)
T ss_dssp HHHHH-TTCCCSCCHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHTS---TTEEEESSSCSSSEEEEEEESC----
T ss_pred HHHHH-hcCCcccchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhC---CCCeeccCCCcceEEEEEecCC----
Confidence 21111 1122222334444555666543 223445566667776666552 12221 1234567778876421
Q ss_pred cchhcccccHHHHHHHHHHHHcCeeecCCCCC-----cccc-----ccCCCHHHHHHHHHHHHHHH
Q 017633 310 FEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-----AGFT-----SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-----~~~~-----~~~~~~~~i~~~~~~l~~~l 365 (368)
...+..++.+.|.++||.+.++..+ .+++ ....+++++++++++|++++
T Consensus 298 -------~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 298 -------AADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp -------HHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred -------hHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 1123578889999999999987421 2233 24468999999999999875
No 162
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.91 E-value=2e-23 Score=191.25 Aligned_cols=305 Identities=13% Similarity=0.063 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 91 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 91 (368)
|++++++.+++... .| .+.+...++++.++++++.. ++++++||++|+..+++.+. ..+++.|++..++|++...
T Consensus 44 ~~v~~a~~~~~~~~-~y-~~~~~~~~l~~~la~~~~~~-~~v~~~~Gt~a~~~~l~~~~-~~~gd~vl~~~~~~~~~~~- 118 (399)
T 2oga_A 44 AETDAAIARVLDSG-RY-LLGPELEGFEAEFAAYCETD-HAVGVNSGMDALQLALRGLG-IGPGDEVIVPSHTYIASWL- 118 (399)
T ss_dssp HHHHHHHHHHHHHT-CC-SSSHHHHHHHHHHHHHTTSS-EEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCTHHHH-
T ss_pred HHHHHHHHHHHhcC-CC-CCchhHHHHHHHHHHHHCCC-eEEEecCHHHHHHHHHHHhC-CCCcCEEEECCCccHHHHH-
Confidence 78999998888753 23 34577899999999999743 67788899999999997652 2467899999999887543
Q ss_pred hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 017633 92 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~ 171 (368)
.+...|..+...+....... .|++++++.++ +++++++++ +++|...+ +++|.++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~-------------~d~~~l~~~i~---~~~~~v~~~---n~tG~~~~----l~~i~~l~~ 175 (399)
T 2oga_A 119 AVSATGATPVPVEPHEDHPT-------------LDPLLVEKAIT---PRTRALLPV---HLYGHPAD----MDALRELAD 175 (399)
T ss_dssp HHHHTTCEEEEECBCSSSSS-------------BCHHHHHHHCC---TTEEEECCB---CGGGCCCC----HHHHHHHHH
T ss_pred HHHHCCCEEEEEecCCCCCC-------------cCHHHHHHhcC---CCCeEEEEe---CCcCCccC----HHHHHHHHH
Confidence 33444443322211110111 18999999987 367777642 34677776 999999999
Q ss_pred HhCCEEEEehhhhchhcccCccccccCCCcchhhh----hhhccC-Cccceeeeeh-HHHHHHhcC---CCC---c---c
Q 017633 172 ENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL----GKIIGG-GLPVGAYGGR-RDIMEMVAP---AGP---M---Y 236 (368)
Q Consensus 172 ~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~----sK~~~~-G~~iG~v~~~-~~~~~~~~~---~~~---~---~ 236 (368)
+||+++|+||+|+.+.. +....++..+|++++ ||.+++ | ++|+++.+ +++++.+.. .+. + .
T Consensus 176 ~~~~~li~Dea~~~g~~---~~~~~~~~~~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 251 (399)
T 2oga_A 176 RHGLHIVEDAAQAHGAR---YRGRRIGAGSSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHET 251 (399)
T ss_dssp HHTCEECEECTTCTTCE---ETTEETTCTTCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCS
T ss_pred HcCCEEEEECcccccCc---cCCeecccccCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccc
Confidence 99999999999964310 111123333466544 699996 8 99999875 777665542 111 0 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceE-EeeccceEE--EEeecCCCcccch
Q 017633 237 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAIC-GGYISGMFG--FFFTEGPVYNFED 312 (368)
Q Consensus 237 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 312 (368)
.+.++..++++++++.++++.+. .+.++..++.+++++.| .+. +.... .+..+..+| +.+..
T Consensus 252 ~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~~L----~~~~g~~~~~~~~~~~~~~~~~~~~~-------- 317 (399)
T 2oga_A 252 KGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALAAEYLSGL----AGLPGIGLPVTAPDTDPVWHLFTVRT-------- 317 (399)
T ss_dssp CCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHT----TTCTTCBCCCCCTTEECCCSSEEEEC--------
T ss_pred cccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh----ccCCCccccCCCCCCcceeEEEEEEC--------
Confidence 12334668888888887776442 23344444444444444 333 22111 111122222 22210
Q ss_pred hcccccHHHHHHHHHHHHcCeeecCCCC---------------------------Ccccc--ccCCCHHHHHHHHHHHHH
Q 017633 313 AKKSETTKFARFYRGMLEEGVYFAPSQF---------------------------EAGFT--SLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---------------------------~~~~~--~~~~~~~~i~~~~~~l~~ 363 (368)
.+..++.+.|.++||.++++.. ..+++ ...++++|+++++++|++
T Consensus 318 ------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 391 (399)
T 2oga_A 318 ------ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE 391 (399)
T ss_dssp ------SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 1246889999999999987531 12343 455699999999999999
Q ss_pred HHhhC
Q 017633 364 VLRQI 368 (368)
Q Consensus 364 ~l~~~ 368 (368)
+++++
T Consensus 392 ~~~~l 396 (399)
T 2oga_A 392 WAERV 396 (399)
T ss_dssp HHHSC
T ss_pred HHHHh
Confidence 98653
No 163
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.91 E-value=1.8e-24 Score=195.32 Aligned_cols=312 Identities=16% Similarity=0.084 Sum_probs=185.8
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCch
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 90 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~ 90 (368)
+|++++++.+.+. ...+++.+...+++++++++++.... ++++||++|+..+++.+... +++.+++.++.+|....
T Consensus 28 ~p~v~~ai~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~~-i~~~~g~~a~~~a~~~~~~~-g~~~vvi~~~~~~~~~~ 103 (359)
T 3pj0_A 28 LTEALQNIDDNLE--SDIYGNGAVIEDFETKIAKILGKQSA-VFFPSGTMAQQIALRIWADR-KENRRVAYHPLSHLEIH 103 (359)
T ss_dssp HHHHTTTSCTTCB--CCBTTBSHHHHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHHHHH-HTCCEEEECTTCHHHHS
T ss_pred CHHHHHHHHhhcc--cCcccCCHHHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHHhc-CCCcEEEEeccceeeeh
Confidence 5666776666332 22334677889999999999864334 55589999999999877543 33335555555543222
Q ss_pred --hhh-hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 017633 91 --PFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 167 (368)
Q Consensus 91 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~ 167 (368)
... ...|..+.. ++...+.. |+++++++ . +++++++++++++++|....+.+++++|+
T Consensus 104 ~~~~~~~~~g~~~~~--v~~~~~~~-------------d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~ 164 (359)
T 3pj0_A 104 EQDGLKELQQITPLL--LGTANQLL-------------TIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKIS 164 (359)
T ss_dssp STTHHHHHHCCEEEE--CSCTTSCC-------------CHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred hcchHHHhcCceEEe--cCCcCCCc-------------CHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHH
Confidence 111 223433322 11111111 88998887 3 46777777766555543455566699999
Q ss_pred HHHHHhCCEEEEehhhhch---hcccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCC
Q 017633 168 RITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 242 (368)
Q Consensus 168 ~l~~~~~~~li~De~~~~~---~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~ 242 (368)
++|++||++||+||+|..+ ..+.. ...+....|+ .++||+++++.+ |+++.++++++.+........+..+.
T Consensus 165 ~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (359)
T 3pj0_A 165 EYCHEQGISLHLDGARLWEITPFYQKS--AEEICALFDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIWKRRYGGDLIS 241 (359)
T ss_dssp HHHHHHTCEEEEEETTCGGGHHHHTCC--HHHHHTTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHcCCEEEEECcchhcchhhhCCC--HHHhhccCCEEEEeccccCCCcce-EEEECCHHHHHHHHHHHHHhCCCcch
Confidence 9999999999999998532 11111 1111112243 489999986534 77788998888775211111112222
Q ss_pred CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE-EeeccceEEEEeecCCCcccchhcccccHHH
Q 017633 243 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKF 321 (368)
Q Consensus 243 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (368)
....++++..+++.. .+..+++.++++++++.|+++ .+.... .+..++++++.+.. +...+.
T Consensus 242 -~~~~~~a~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 304 (359)
T 3pj0_A 242 -LYPYILSADYYFEKR--IGKMAEYFEAAKGLAERFNSC---SGVKTVPEVPVSNMFHVYFEN-----------SADEIG 304 (359)
T ss_dssp -CHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHTS---TTEEEESSSCSSSEEEEEESS-----------CHHHHH
T ss_pred -hHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHhhC---CCceeeccCCcceEEEEEecC-----------ccchhH
Confidence 333344444555543 234455666777777766653 122211 23456667776632 112346
Q ss_pred HHHHHHHHHcCeeecCCCCC------cccc-----ccCCCHHHHHHHHHHHHHHH
Q 017633 322 ARFYRGMLEEGVYFAPSQFE------AGFT-----SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 322 ~~~~~~l~~~Gi~~~~~~~~------~~~~-----~~~~~~~~i~~~~~~l~~~l 365 (368)
.++.+.|.++||.+.++..+ .+++ ....+.+++++++++|++.+
T Consensus 305 ~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 305 AILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp HHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 78999999999999998422 2233 23468999999999998763
No 164
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.91 E-value=2.4e-23 Score=190.28 Aligned_cols=307 Identities=14% Similarity=0.059 Sum_probs=195.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 89 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 89 (368)
-++++++++.+++.... + .+.+...++++.++++++. +++++++||++|+..+++.+. ..+++.|++..++|++..
T Consensus 18 ~~~~~~~a~~~~~~~~~-~-~~~~~~~~l~~~la~~~~~-~~~~~~~~gt~al~~~~~~~~-~~~gd~Vl~~~~~~~~~~ 93 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGW-I-TTGPKNQELEAAFCRLTGN-QYAVAVSSATAGMHIALMALG-IGEGDEVITPSMTWVSTL 93 (393)
T ss_dssp CCHHHHHHHHHHHHHTC-C-SSSHHHHHHHHHHHHHHCC-SEEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCHHHH
T ss_pred CCHHHHHHHHHHHhcCC-c-CCChHHHHHHHHHHHHhCC-CcEEEecChHHHHHHHHHHcC-CCCCCEEEeCCCccHhHH
Confidence 45788999998887642 2 3567889999999999863 489999999999999997652 346788999999988764
Q ss_pred hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 90 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
. .....|..+........... .|++++++.++ ++++++++++ ++|...+ +++|.++
T Consensus 94 ~-~~~~~g~~~~~v~~~~~~~~-------------~d~~~l~~~l~---~~~~~v~~~~---~~G~~~~----~~~i~~l 149 (393)
T 1mdo_A 94 N-MIVLLGANPVMVDVDRDTLM-------------VTPEHIEAAIT---PQTKAIIPVH---YAGAPAD----LDAIYAL 149 (393)
T ss_dssp H-HHHHTTCEEEEECBCTTTCC-------------BCHHHHHHHCC---TTEEEECCBC---GGGCCCC----HHHHHHH
T ss_pred H-HHHHCCCEEEEEeccCCcCC-------------CCHHHHHHhcC---CCceEEEEeC---CCCCcCC----HHHHHHH
Confidence 3 33334443322211111111 18999999987 3678777754 3566666 9999999
Q ss_pred HHHhCCEEEEehhhhc-h-hcccCccccccCCCcchh--hhh--hhccCCccceeeeeh-HHHHHHhcCCCCc-c-----
Q 017633 170 TKENGALLIFDEVMTG-F-RLAYGGAQEYFGVTPDLT--TLG--KIIGGGLPVGAYGGR-RDIMEMVAPAGPM-Y----- 236 (368)
Q Consensus 170 ~~~~~~~li~De~~~~-~-~~g~~~~~~~~~~~~di~--s~s--K~~~~G~~iG~v~~~-~~~~~~~~~~~~~-~----- 236 (368)
|++||+++|+||+|+. + ..+. .++. +|++ |+| |++++| ++|+++.+ +++++.+...... .
T Consensus 150 ~~~~~~~li~D~a~~~g~~~~~~-----~~~~-~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (393)
T 1mdo_A 150 GERYGIPVIEDAAHATGTSYKGR-----HIGA-RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAW 222 (393)
T ss_dssp HHHHTCCBCEECTTCTTCEETTE-----ETTS-SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC--
T ss_pred HHHcCCeEEEECccccCCeECCe-----ecCC-CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccch
Confidence 9999999999999973 3 2221 2232 5655 555 777655 89999886 7776655421110 0
Q ss_pred ---------------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE------Eeecc
Q 017633 237 ---------------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC------GGYIS 295 (368)
Q Consensus 237 ---------------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~------~~~~~ 295 (368)
.+.++..+++.++++...++.+ +++.++.+++.+++++.|.+ .+.... ....+
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~ 296 (393)
T 1mdo_A 223 DRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKL--DALNARRAAIAAQYHQAMAD----LPFQPLSLPSWEHIHAW 296 (393)
T ss_dssp ---------CCEESSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHT----SSCEECCCCSSCEECCC
T ss_pred hhhcccccccccccccCccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhc----CCcccccCCCCCCCcee
Confidence 0011235677776666655533 22344444444555444443 332110 12334
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-------------------------cccccc--C
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-------------------------AGFTSL--A 348 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-------------------------~~~~~~--~ 348 (368)
.++++.+.... ...+..++.+.|.++||.++++..+ .++++. .
T Consensus 297 ~~~~v~~~~~~----------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~ 366 (393)
T 1mdo_A 297 HLFIIRVDEAR----------CGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPD 366 (393)
T ss_dssp SCEEEECCHHH----------HSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTT
T ss_pred EEEEEEecccc----------cccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCC
Confidence 46677652100 0123578999999999999886432 244443 4
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 017633 349 HSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 349 ~~~~~i~~~~~~l~~~l~~ 367 (368)
++++|+++++++|++++..
T Consensus 367 ~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 367 MTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp CCHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6999999999999998754
No 165
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.91 E-value=6.3e-24 Score=194.56 Aligned_cols=290 Identities=13% Similarity=0.049 Sum_probs=193.0
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...+|+++++++++. +++++++||++|+..+++.+ ..++|.|++.++.|++.........
T Consensus 78 ~~~p~~~~l~~~la~~~g~-~~~~~~~sG~~Ai~~al~~l--~~~Gd~Vi~~~~~y~~~~~~~~~~~------------- 141 (414)
T 3ndn_A 78 YGNPTVSVFEERLRLIEGA-PAAFATASGMAAVFTSLGAL--LGAGDRLVAARSLFGSCFVVCSEIL------------- 141 (414)
T ss_dssp TCCHHHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHTT--CCTTCEEEEESCCCHHHHHHHHTHH-------------
T ss_pred CCChHHHHHHHHHHHHHCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCccchHHHHHHHHH-------------
Confidence 4577889999999999864 67889999999999988765 3567899999999988543221100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
...+.+++.++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++||++||+||+|+..
T Consensus 142 ---~~~g~~~~~v~~~d~~~l~~ai~---~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~~~--- 208 (414)
T 3ndn_A 142 ---PRWGVQTVFVDGDDLSQWERALS---VPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFATP--- 208 (414)
T ss_dssp ---HHTTCEEEEECTTCHHHHHHHTS---SCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTHH---
T ss_pred ---HHcCcEEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCccc---
Confidence 01123455566668999999997 46788888888888888877 999999999999999999999632
Q ss_pred cCccccccCCCcchhhhhhhccC-C-ccceeeeehHHHHH-HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 266 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~ 266 (368)
.......++.+..+.|+||.+++ | +++|+++++++.+. .+.. .......+.++..++.+...++.+ +...++
T Consensus 209 ~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~---~~~~~g~~~~~~~a~~~~~~l~~l--~~r~~~ 283 (414)
T 3ndn_A 209 LLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---LMRHTGPAMSAFNAWVLLKGLETL--AIRVQH 283 (414)
T ss_dssp HHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHH---HHHHHCCCCCHHHHHHHHHHGGGH--HHHHHH
T ss_pred ccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHH---HHHHcCCCCCHHHHHHHHHHHHHH--HHHHHH
Confidence 11111244555566789999995 7 89999999877655 4431 111122244666666655555433 223455
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceE------------------EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHH
Q 017633 267 LNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 328 (368)
Q Consensus 267 ~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (368)
..++++++.+.|++. +.... ..+.|.++++.+..... ........+.+.|
T Consensus 284 ~~~~a~~l~~~L~~~----p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~--------~~~~~~~~~~~~l 351 (414)
T 3ndn_A 284 SNASAQRIAEFLNGH----PSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED--------VAKQRAFEVLDKM 351 (414)
T ss_dssp HHHHHHHHHHHHHTC----TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG--------GHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC----CCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc--------ccHHHHHHHHHhC
Confidence 566666666666542 22111 13457788988842100 0033456778888
Q ss_pred HHcCeeecCCCCCcc-------------------------ccccCCCHHHHHHHHHHHHHHH
Q 017633 329 LEEGVYFAPSQFEAG-------------------------FTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 329 ~~~Gi~~~~~~~~~~-------------------------~~~~~~~~~~i~~~~~~l~~~l 365 (368)
...++.++.|+.... .+++....|+.+.+++.|++++
T Consensus 352 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al 413 (414)
T 3ndn_A 352 RLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRAL 413 (414)
T ss_dssp SSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred ccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhh
Confidence 777777776652211 1234456678888899988876
No 166
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.91 E-value=8.1e-23 Score=186.41 Aligned_cols=284 Identities=14% Similarity=0.116 Sum_probs=193.5
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...++++.++++++. +++++++||++|++.+++.+ ..+++.|++..+.|++........
T Consensus 63 ~~~~~~~~l~~~la~~~g~-~~~~~~~sGt~A~~~al~~~--~~~gd~Vi~~~~~y~~~~~~~~~~-------------- 125 (392)
T 3qhx_A 63 TGNPTRTALEAALAAVEDA-AFGRAFSSGMAAADCALRAM--LRPGDHVVIPDDAYGGTFRLIDKV-------------- 125 (392)
T ss_dssp TCCHHHHHHHHHHHHHTTC-SEEEEESSHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHT--------------
T ss_pred CCChHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEeCCCcchHHHHHHHH--------------
Confidence 4567788999999999864 37888899999999999866 456789999999998653332111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++ ++++++++++++|++|.+.+ +++|+++|++||+++|+||+|+..
T Consensus 126 --~~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~g~~li~D~~~~~~--- 193 (392)
T 3qhx_A 126 --FTGWNVEYTPVALADLDAVRAAIR---PTTRLIWVETPTNPLLSIAD----IAGIAQLGADSSAKVLVDNTFASP--- 193 (392)
T ss_dssp --GGGGTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT---
T ss_pred --HHhcCcEEEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCcEEec----HHHHHHHHHHcCCEEEEECCCccc---
Confidence 011223455566668999999997 47899999999888898888 999999999999999999999632
Q ss_pred cCccccccCCCcchh--hhhhhccC-C-ccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHH
Q 017633 190 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 264 (368)
Q Consensus 190 ~~~~~~~~~~~~di~--s~sK~~~~-G-~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~ 264 (368)
+.....+..+|++ |++|.+++ | +++|+++.+ +++.+.+.. ..+..+...+++.++++...++.+ +...
T Consensus 194 --~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~---~~~~~g~~~~~~~~~~~~~~l~~l--~~~~ 266 (392)
T 3qhx_A 194 --ALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF---LQNGAGAVPGPFDAYLTMRGLKTL--VLRM 266 (392)
T ss_dssp --TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHTTH--HHHH
T ss_pred --ccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhhHH--HHHH
Confidence 1122223345654 59999995 5 789999887 577777652 233455677888888877766543 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEE------------------eeccceEEEEeecCCCcccchhcccccHHHHHHHH
Q 017633 265 EYLNKITGELTQGIIDAGKKAGHAICG------------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 326 (368)
Q Consensus 265 ~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (368)
++..++.+++.+.|++ .+....+ .+.+.++++.+.. +......+.+
T Consensus 267 ~~~~~~~~~l~~~L~~----~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~------------~~~~~~~~~~ 330 (392)
T 3qhx_A 267 QRHSENAAAVAEFLAE----HPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRA------------GRTAAEQLCA 330 (392)
T ss_dssp HHHHHHHHHHHHHHHT----CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc----CCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCC------------cHHHHHHHHH
Confidence 4555566666655544 2221111 3346788888732 1244567777
Q ss_pred HHHHcCeeecCCCCCcc----------------------ccccCCCHHHHHHHHHHHHHHH
Q 017633 327 GMLEEGVYFAPSQFEAG----------------------FTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 327 ~l~~~Gi~~~~~~~~~~----------------------~~~~~~~~~~i~~~~~~l~~~l 365 (368)
.|...|+.++.++.... .+++....++.++.++.|.+++
T Consensus 331 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 331 KTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp HCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred hCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 77777777776643110 1123355667777888887765
No 167
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.91 E-value=1.8e-22 Score=185.87 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=182.1
Q ss_pred CcHHHHHHHHHHHHcCCC-------CCCCC----hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKKGTS-------FGAPC----LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~-------~~~~~----~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+|++++++.+++.+... ++... +....+++.+++.++ +.++++++ +|++|++.+++.+ ..++|.
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~-sGt~a~~~~~~~~--~~~gd~ 113 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPN-SGSQANQGVYAAL--INPGDK 113 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCS-SHHHHHHHHHHHH--SCTTCE
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEec-cHHHHHHHHHHHh--cCCCCE
Confidence 489999999888744221 11122 333345557888877 44456565 6799999999877 457889
Q ss_pred EEEEcCCCCCCchhh--hhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 78 IIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 78 vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
|++..++|++..... ....+.......++..... ..|+++|++++++. +++++++.+.+ .|.
T Consensus 114 vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~i~~~--~~~~v~~~~~~--~G~ 177 (417)
T 3n0l_A 114 ILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDG------------RIDYEKVREIAKKE--KPKLIVCGASA--YAR 177 (417)
T ss_dssp EEEECC----------------CCSEEEEECCCTTS------------SCCHHHHHHHHHHH--CCSEEEECCSS--CCS
T ss_pred EEecccccccccchhhhhhhhcceeeeEeccCCCCC------------CcCHHHHHHHHHhc--CCeEEEECCcc--cCc
Confidence 999999887753311 1112221111111100000 12899999999842 46666665543 366
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcch--hhhhhhccCCccceeeeeh-HHHHHHhc
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGR-RDIMEMVA 230 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~-~~~~~~~~ 230 (368)
..+ +++|+++|++||++||+||+| .++ ..+.... . .. ..|+ .|+||++ +|+|+||++++ +++++.+.
T Consensus 178 ~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~-~~-~~di~~~s~sK~l-~g~~~G~~~~~~~~~~~~~~ 249 (417)
T 3n0l_A 178 VID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHPS-P-FP-YAHVVSSTTHKTL-RGPRGGIIMTNDEELAKKIN 249 (417)
T ss_dssp CCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-C-TT-TCSEEEEESSTTT-CSCSCEEEEESCHHHHHHHH
T ss_pred cCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCCC-c-cc-cceEEEeeCcccc-CCCCeeEEEECCHHHHHHHh
Confidence 777 999999999999999999997 554 3332111 0 11 2354 4677999 67789999887 77777765
Q ss_pred CCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeccceEEEEeecCC
Q 017633 231 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGP 306 (368)
Q Consensus 231 ~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 306 (368)
... ..+.+.+++...++++.+++..... +.+.+++.++++++.+.|.+ .++.... ...+.++++.+..
T Consensus 250 ~~~--~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~-- 321 (417)
T 3n0l_A 250 SAI--FPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD----RKFKLVSDGTDNHLVLMSFLD-- 321 (417)
T ss_dssp HHH--TTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEECTT--
T ss_pred hhh--CCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCceeccCCCCceEEEEEccc--
Confidence 211 1122224456666666666655322 23444555555666555554 3322111 1234466666532
Q ss_pred CcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc----------cccc------cCCCHHHHHHHHHHHHHHHhh
Q 017633 307 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA----------GFTS------LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~----------~~~~------~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..++.+.|.++||.+.+...+. +++. ..++++++++++++|++++.+
T Consensus 322 ----------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 322 ----------REFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp ----------SSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----------CCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 11124678888889999998653221 2221 236789999999999998854
No 168
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.91 E-value=1.6e-23 Score=191.74 Aligned_cols=211 Identities=14% Similarity=0.046 Sum_probs=150.2
Q ss_pred ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchh---hhhhcCCCccccCCCCC
Q 017633 32 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP---FLVKAGSGVATLGLPDS 108 (368)
Q Consensus 32 ~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 108 (368)
.+...+++++++++++. +++++++||++|+..+++.+ ..+++.|++..+.|++.... .+...|
T Consensus 61 ~~~~~~l~~~ia~~~g~-~~~i~~~~g~~ai~~~~~~l--~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g----------- 126 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKT-EACVATSSGMGAIAATVLTI--LKAGDHLISDECLYGCTHALFEHALTKFG----------- 126 (404)
T ss_dssp CHHHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHHH--CCTTCEEEEESCCCHHHHHHHHTHHHHTT-----------
T ss_pred ChHHHHHHHHHHHHhCC-CcEEEeCChHHHHHHHHHHH--hCCCCEEEEeCCCchhHHHHHHHHHHHcC-----------
Confidence 35566999999999864 37888889999999999765 35678999999888865332 122222
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEehhhhch-
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVMTGF- 186 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~-~~~~li~De~~~~~- 186 (368)
.+++.++.+|++++++.++ ++++++++++.+|++|.+.+ +++|+++|++ ||+++|+||+|.++
T Consensus 127 --------~~~~~v~~~d~~~l~~~i~---~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~ 191 (404)
T 1e5e_A 127 --------IQVDFINTAIPGEVKKHMK---PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPM 191 (404)
T ss_dssp --------CEEEEECTTSTTHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTT
T ss_pred --------CEEEEECCCCHHHHHHhcC---CCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhh
Confidence 2344555558899999887 47888888888888888887 9999999999 99999999999865
Q ss_pred hcccCccccccCCCcchhhhhhhcc-CCccc-eeeeehHHHHH-HhcCCCCccccc-cCCCCHHHHHHHHHHHHHHccCC
Q 017633 187 RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPV-GAYGGRRDIME-MVAPAGPMYQAG-TLSGNPLAMTAGIHTLKRLKEPG 262 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~s~sK~~~-~G~~i-G~v~~~~~~~~-~~~~~~~~~~~~-t~~~~~~~~~a~~~~l~~~~~~~ 262 (368)
.. .. . .++.+..+.|+||+++ +|+|+ ||+++++++++ .+.... ... +.+.+++.+.++.++++.+ +.
T Consensus 192 ~~-~~--~-~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~---~~~~g~~~~~~~~~~~~~~l~~~--~~ 262 (404)
T 1e5e_A 192 IT-NP--V-DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGI---KDITGSVISPHDAWLITRGLSTL--NI 262 (404)
T ss_dssp TC-CG--G-GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCC---CCCCCCCCCHHHHHHHHHHHTTH--HH
T ss_pred hC-Cc--c-ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHH---HhCCCCCCCHHHHHHHHHhHhHH--HH
Confidence 21 11 1 2444444568999999 58998 99999988877 776422 212 3457888888887777633 22
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017633 263 TYEYLNKITGELTQGIID 280 (368)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~ 280 (368)
..++..++.+.+.+.+++
T Consensus 263 ~~~~~~~~~~~l~~~l~~ 280 (404)
T 1e5e_A 263 RMKAESENAMKVAEYLKS 280 (404)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 334445555555555544
No 169
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.3e-23 Score=192.80 Aligned_cols=321 Identities=13% Similarity=0.050 Sum_probs=199.5
Q ss_pred CCcHHHHHHHHHHHHcCCC---C-CCC----ChhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhc----
Q 017633 9 PSYLQVLAALGETMKKGTS---F-GAP----CLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFT---- 73 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~---~-~~~----~~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~---- 73 (368)
++++.+.+++.+++..... + +.. .+.+.++.++++++++ + .+++++++||++|+..+++.++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 3567888888888776311 1 111 2456678888888887 3 5799999999999999998876431
Q ss_pred C--CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 74 G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 74 ~--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
+ ++.|++..++|. .....+...|..+...+.....+.. |+++|+++++ +++++++++..++
T Consensus 155 g~~~~~Vi~~~~~h~-~~~~~~~~~G~~~~~v~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~~~p~n 217 (497)
T 3mc6_A 155 GITEPEIIAPVTAHA-GFDKAAYYFGMKLRHVELDPTTYQV-------------DLGKVKKFIN---KNTVLLVGSAPNF 217 (497)
T ss_dssp CCSSCEEEEETTSCH-HHHHHHHHSCCEEEEECBCTTTCSB-------------CTTTTGGGCC---SSEEEEEEETTCT
T ss_pred CCCCceEEEeCCccH-HHHHHHHHcCCeEEEEecCcccCcC-------------CHHHHHHHHh---hCCEEEEEECCCC
Confidence 2 256777665544 4455555555544332222111111 7888888887 4688888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hc-----c--c--CccccccCCCcchhhhhhhccCCccceeeee
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-----A--Y--GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGG 221 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~-----g--~--~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~ 221 (368)
++|.+.+ +++|+++|++||++||+||+|.++ .. + . .+.....+.+.-..+++|.+.+|.++|++++
T Consensus 218 ptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~ 293 (497)
T 3mc6_A 218 PHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMY 293 (497)
T ss_dssp TTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEEC
T ss_pred CCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEe
Confidence 8888877 899999999999999999999765 32 1 1 1222333442223456798888899999988
Q ss_pred hHHHHHHhcCC-CCccccc-----cC--CCCHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 222 RRDIMEMVAPA-GPMYQAG-----TL--SGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~-----t~--~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
+++........ ......+ ++ +.+....+++.++++.+.++ ++.++..++++++++.|++.. .++...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~g~~~~ 371 (497)
T 3mc6_A 294 RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENI--PDLDIM 371 (497)
T ss_dssp SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--TTCEEC
T ss_pred cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEe
Confidence 76655443211 1111111 11 11222344455555555443 234555566666666665521 122222
Q ss_pred EeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc-cc--cccCCCHHHHHHHHHHHHHHHhh
Q 017633 291 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GF--TSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~-~~--~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
....+.++.+.. ...+..++.+.|.++||.+..+..+. ++ +. ..+++++++++++|++++++
T Consensus 372 ~~~~~~~v~~~~--------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 372 GNPRYSVISFSS--------------KTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp SCCCSSEEEEEC--------------TTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHHHHHH
T ss_pred cCCCeeEEEEeC--------------CCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCCHHHHHHHHHHHHHHHHH
Confidence 223444545442 12235789999999999998765432 23 33 56899999999999998854
No 170
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.91 E-value=1.4e-22 Score=185.31 Aligned_cols=323 Identities=16% Similarity=0.064 Sum_probs=195.2
Q ss_pred cHHHHHHHHHHHHcCCCCCCC-ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCc
Q 017633 11 YLQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 89 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 89 (368)
+|++++++.+.+... ++.+ .+...++++.++++++. +++++++||++|+..+++.+. ..+++.|++..++|++..
T Consensus 11 ~~~v~~a~~~~~~~~--~~~~~g~~~~~l~~~la~~~~~-~~v~~~~ggt~al~~~~~~l~-~~~gd~Vl~~~~~~~~~~ 86 (394)
T 1o69_A 11 GGNELKYIEEVFKSN--YIAPLGEFVNRFEQSVKDYSKS-ENALALNSATAALHLALRVAG-VKQDDIVLASSFTFIASV 86 (394)
T ss_dssp -CCHHHHHHHHHHHT--TTSCTTHHHHHHHHHHHHHHCC-SEEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCGGGT
T ss_pred CHHHHHHHHHHHHcC--CccCCChHHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHcC-CCCCCEEEECCCccHHHH
Confidence 467888888887652 2221 24588999999999854 789999999999999997652 346789999999998876
Q ss_pred hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 90 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
..... .|..+...... ..+.. |++++++.+++.+++++++++++ ++|...+ +++|.++
T Consensus 87 ~~~~~-~g~~~~~v~~~-~~~~~-------------d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~----l~~i~~l 144 (394)
T 1o69_A 87 APICY-LKAKPVFIDCD-ETYNI-------------DVDLLKLAIKECEKKPKALILTH---LYGNAAK----MDEIVEI 144 (394)
T ss_dssp HHHHH-TTCEEEEECBC-TTSSB-------------CHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC----HHHHHHH
T ss_pred HHHHH-cCCEEEEEEeC-CCCCc-------------CHHHHHHHHhcccCCceEEEEEC---CCCChhh----HHHHHHH
Confidence 54443 33332221111 11111 89999999985322567777765 3565555 9999999
Q ss_pred HHHhCCEEEEehhhh-ch-hcccCccccccCCCcchhhhh--hhccCCccceeeeeh-HHHHHHhcCCCCcc--------
Q 017633 170 TKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR-RDIMEMVAPAGPMY-------- 236 (368)
Q Consensus 170 ~~~~~~~li~De~~~-~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~-~~~~~~~~~~~~~~-------- 236 (368)
|++||+++|+||+|+ ++ ..+... ..+ ..+|+.++| |.++ |.++|+++++ +++++.+.......
T Consensus 145 ~~~~~~~li~Dea~~~g~~~~~~~~--~~~-~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 220 (394)
T 1o69_A 145 CKENDIVLIEDAAEALGSFYKNKAL--GTF-GEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENCLHYE 220 (394)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEET--TSS-SSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCC
T ss_pred HHHcCCEEEEECcCcccceeCCccc--ccc-cCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccCcccc
Confidence 999999999999997 55 333211 011 135788885 5554 5689999995 77776654211110
Q ss_pred ---ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-eEEEEeecCC----Cc
Q 017633 237 ---QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGP----VY 308 (368)
Q Consensus 237 ---~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~ 308 (368)
.+.++..+++.++.++..++.+ ++..++++++++++++.|.++ ............+. ++++.+.... ..
T Consensus 221 ~~~~g~~~~~~~~~aa~~l~~l~~l--~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 297 (394)
T 1o69_A 221 HLDYGYNYRLSNVLGAIGVAQMEVL--EQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNAC 297 (394)
T ss_dssp CSSCCCBCBCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCC
T ss_pred ccccCcccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccc
Confidence 0112225666666665554433 224566666666666666553 11110000000121 3455542100 00
Q ss_pred c-c-chhcc--cccHHHHHHHHHHHHcCeeecCCCCCccc--------------------------cccCCCHHHHHHHH
Q 017633 309 N-F-EDAKK--SETTKFARFYRGMLEEGVYFAPSQFEAGF--------------------------TSLAHSSDDIQHTI 358 (368)
Q Consensus 309 ~-~-~~~~~--~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--------------------------~~~~~~~~~i~~~~ 358 (368)
. + ..... ....+..++.+.|.++||.++++..+..+ ....++++|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~ 377 (394)
T 1o69_A 298 QKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEIS 377 (394)
T ss_dssp CEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred cccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHH
Confidence 0 0 00000 00124678999999999999987433110 02337999999999
Q ss_pred HHHHHHHh
Q 017633 359 TAAEKVLR 366 (368)
Q Consensus 359 ~~l~~~l~ 366 (368)
++|++++.
T Consensus 378 ~~l~~~~~ 385 (394)
T 1o69_A 378 KLILKSIK 385 (394)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998874
No 171
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.91 E-value=2.9e-23 Score=194.15 Aligned_cols=338 Identities=13% Similarity=0.019 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--cCCce---EEEEcCCCC
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--TGRER---IIKFEGCYH 86 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--~~~~~---vi~~~~~~~ 86 (368)
+.+++++.+++......+.+.+...+++++++++++ .+++++|+||++|++.++++++.+ .+++. ||+. ..++
T Consensus 55 ~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~-~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~ 132 (467)
T 1ax4_A 55 NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFN-YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHF 132 (467)
T ss_dssp CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHC-CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCC
T ss_pred HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcC-CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-cccc
Confidence 677888877776543334456778899999999985 479999999999999999887542 04555 7666 3333
Q ss_pred CCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccC-CCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 87 GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP-FNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
+.....+...|........... +. ........ ..|+++|+++++.+. ++++++++++++|++|...++.++++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~ 207 (467)
T 1ax4_A 133 DTTAAHVELNGCKAINIVTEKA--FD---SETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLK 207 (467)
T ss_dssp HHHHHHHHHTTCEEEECBCGGG--GC---TTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhhHHHhccCCceeccccccc--cc---ccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHH
Confidence 4434444444443221111000 00 00000000 118999999998532 36899999988888755666777799
Q ss_pred HHHHHHHHhCCEEEEehhhhc--hh---c---ccC-ccccccC----CCcch--hhhhhhccCCccce-eeeeh-H-HHH
Q 017633 165 AIRRITKENGALLIFDEVMTG--FR---L---AYG-GAQEYFG----VTPDL--TTLGKIIGGGLPVG-AYGGR-R-DIM 226 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~--~~---~---g~~-~~~~~~~----~~~di--~s~sK~~~~G~~iG-~v~~~-~-~~~ 226 (368)
+|+++|++||++||+||++.. .. . +.. .....+. ..+|+ .++||+++ +++| +++.+ + +++
T Consensus 208 ~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g--~~~Gg~~~~~d~~~l~ 285 (467)
T 1ax4_A 208 EVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL--LNIGGLVAIRDNEEIF 285 (467)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC--CSSCEEEEESSCHHHH
T ss_pred HHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCC--CCcceEEEeCCHHHHH
Confidence 999999999999999998742 10 0 111 1111110 11344 36778775 3555 55566 5 776
Q ss_pred HHhcCCCCcc-ccccCCCCHH-HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec
Q 017633 227 EMVAPAGPMY-QAGTLSGNPL-AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 304 (368)
Q Consensus 227 ~~~~~~~~~~-~~~t~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (368)
+.+....... ...+++..+. .+.++..+++.+.++++.++..++++++++.|++ .+.....+..+.++|+.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~ 361 (467)
T 1ax4_A 286 TLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE----AGIPIQYPTGGHAVFVDCKK 361 (467)
T ss_dssp HHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH----TTCCBCSSCCSSEEEEESTT
T ss_pred HHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh----CCCCcccCCCceEEEEehhh
Confidence 6554211000 0112222332 2333333555443323555556677777777766 23322223345566666311
Q ss_pred CCCcccchhcccccHHHHHHHHHH-HHcCeeecC-CC----------------CCcccccc---CCCHHHHHHHHHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAP-SQ----------------FEAGFTSL---AHSSDDIQHTITAAEK 363 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~-~~----------------~~~~~~~~---~~~~~~i~~~~~~l~~ 363 (368)
.. ... .....+..++++.| .++||.+.+ +. ...+|+++ .++++|+++++++|++
T Consensus 362 ~~-~~~----~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 436 (467)
T 1ax4_A 362 LV-PQI----PGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIG 436 (467)
T ss_dssp TC-TTS----CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHT
T ss_pred hc-ccc----ccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHH
Confidence 00 000 00112357899998 889999987 31 12344433 3789999999999998
Q ss_pred HHhh
Q 017633 364 VLRQ 367 (368)
Q Consensus 364 ~l~~ 367 (368)
++.+
T Consensus 437 ~~~~ 440 (467)
T 1ax4_A 437 LKEK 440 (467)
T ss_dssp THHH
T ss_pred HHHh
Confidence 7753
No 172
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=3.6e-22 Score=184.37 Aligned_cols=316 Identities=15% Similarity=0.056 Sum_probs=176.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC----------ChhHHHHH-HHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 10 SYLQVLAALGETMKKGTSFGAP----------CLLENVLA-EMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~----------~~~~~~l~-~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+|++++++.+++.+...++++ .+...++. +.+++.++-....++++||++|++.+++.+ ..+++.|
T Consensus 44 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~--~~~gd~V 121 (425)
T 3ecd_A 44 VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLAL--AKPGDTV 121 (425)
T ss_dssp CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH--CCTTCEE
T ss_pred CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHc--cCCCCEE
Confidence 4899999999887532111111 12334444 667777653333355889999999999876 4578899
Q ss_pred EEEcCCCCCCchhhh--hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEc-ccCCCCCc
Q 017633 79 IKFEGCYHGHADPFL--VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE-PVVGNSGF 155 (368)
Q Consensus 79 i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~-~~~~~~g~ 155 (368)
++..++|++...... ...+.......++.... .. .-|++++++.+++. ++++++++ |++ |.
T Consensus 122 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~---~~d~~~l~~~i~~~--~~~~v~~~~~~~---~~ 185 (425)
T 3ecd_A 122 LGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRD--------TM---LIDYDQVEALAQQH--KPSLIIAGFSAY---PR 185 (425)
T ss_dssp EEECC------------------CEEEEECCCTT--------TS---SCCHHHHHHHHHHH--CCSEEEEECSCC---CS
T ss_pred EEcccccccceecchhhhhcccceeeeecCCCcc--------cC---ccCHHHHHHHHhhc--CCcEEEEccccC---CC
Confidence 999998887321111 12222211111111000 00 01899999999742 46666666 443 33
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchhhhhhhccCCccceeeeeh-HHHHHHhcCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR-RDIMEMVAPA 232 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~-~~~~~~~~~~ 232 (368)
..+ +++|+++|++||++||+||+| .++ +.+....... ..+.-+.|+||++ +|+|+||++++ +.+.+.+...
T Consensus 186 ~~~----l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~l-~g~~~g~~~~~~~~~~~~~~~~ 259 (425)
T 3ecd_A 186 KLD----FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKTL-RGPRGGFVLTNDEEIAKKINSA 259 (425)
T ss_dssp CCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGG-CCCSCEEEEESCHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCccc-CCCCcEEEEeCCHHHHHHHHhh
Confidence 344 899999999999999999996 555 4443221111 1222235788999 56789999887 5666665421
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCc
Q 017633 233 GPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVY 308 (368)
Q Consensus 233 ~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 308 (368)
...+.+.+.+...+.++..++..... +++.+++.++++++++.|.+ .++..... ..+.++++.+..
T Consensus 260 --~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~---- 329 (425)
T 3ecd_A 260 --VFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA----GGVDLVTGGTDNHLLLVDLRP---- 329 (425)
T ss_dssp --HC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEECGG----
T ss_pred --hCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh----CCCeeccCCCCceEEEEEeCC----
Confidence 01111113344444444445443322 23455566666666666655 33322111 345566776532
Q ss_pred ccchhcccccHHHHHHHHHHHHcCeeec----CCCC------Cccccc------cCCCHHHHHHHHHHHHHHHhh
Q 017633 309 NFEDAKKSETTKFARFYRGMLEEGVYFA----PSQF------EAGFTS------LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~~~------~~~~~~------~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+...+.+.|.++||.+. |+.. ..+++. ...++++++++++.|++++++
T Consensus 330 --------~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 330 --------KGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp --------GTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence 11234678888888999998 4311 112221 234589999999999998754
No 173
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.91 E-value=9.1e-23 Score=187.16 Aligned_cols=312 Identities=13% Similarity=0.062 Sum_probs=189.5
Q ss_pred cHHHHHHHHHHHHcCC--C-----CCCCChhHHH----HHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 11 YLQVLAALGETMKKGT--S-----FGAPCLLENV----LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~--~-----~~~~~~~~~~----l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
+|++++++.+++.+.. . +........+ ++++++++++.....++++||++|+..+++.+ ..+++.|+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~--~~~gd~Vl 113 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTV--LEHGDTVL 113 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH--CCTTCEEE
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHh--cCCCCEEE
Confidence 8999999998885311 1 1111223334 44688888873344455567899999999877 45678899
Q ss_pred EEcCCCCCCchhh--hhhcCCCccccCCCC--CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCc
Q 017633 80 KFEGCYHGHADPF--LVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 155 (368)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~ 155 (368)
+..+.|+...... ....|.+.....++. ... ..|++++++.+++. +++++++++.+ .|.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~d~~~l~~~i~~~--~~~~v~~~~~~--~~~ 176 (405)
T 2vi8_A 114 GMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETH-------------VIDYDDVREKARLH--RPKLIVAAAAA--YPR 176 (405)
T ss_dssp EECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTC-------------SBCHHHHHHHHHHH--CCSEEEECCSS--CCS
T ss_pred EecccccchhcccchhhhccceeEEEecccccccC-------------CcCHHHHHHHHHhc--CCeEEEEeCCC--CCc
Confidence 8887765543211 112221111100110 011 11899999999842 45677775433 343
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCC-Ccchh--hhhhhccCCccceeeeehHHHHHHhcCC
Q 017633 156 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPA 232 (368)
Q Consensus 156 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~iG~v~~~~~~~~~~~~~ 232 (368)
..+ +++|.++|++||++||+||+|+....+.... .+.+ .+|++ |+||+++|+.+ ||+++++++++.+...
T Consensus 177 ~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~--~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~ 249 (405)
T 2vi8_A 177 IID----FAKFREIADEVGAYLMVDMAHIAGLVAAGLH--PNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKA 249 (405)
T ss_dssp CCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSS--CCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHcCCEEEEEccccccccccCcC--CCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhh
Confidence 444 9999999999999999999997321111111 1111 35654 89999985444 9999998888776531
Q ss_pred CCccccccCC-CCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCC
Q 017633 233 GPMYQAGTLS-GNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPV 307 (368)
Q Consensus 233 ~~~~~~~t~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 307 (368)
. ...+++ .++..++++.++++.+.. +++.+++.++++++++.|++. +.....+ +.++++++.+...
T Consensus 250 ~---~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~-- 320 (405)
T 2vi8_A 250 I---FPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE----GFTLVSGGTDNHLLLVDLRPQ-- 320 (405)
T ss_dssp H---TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT----TCEEGGGSCSSSEEEEECGGG--
T ss_pred h---cccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCCceEEEEEccCC--
Confidence 1 112222 356666666677776543 334566666666666666553 3322111 3466777776310
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCC----------CCcccccc------CCCHHHHHHHHHHHHHHHhh
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTSL------AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------~~~~~~~~------~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|.++||.+.++. ...+|+++ .++++++++++++|++++.+
T Consensus 321 ----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 321 ----------QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp ----------TCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred ----------CCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 1124678888999999998753 11234432 36899999999999998864
No 174
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=2e-22 Score=188.42 Aligned_cols=315 Identities=17% Similarity=0.155 Sum_probs=195.8
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCC------ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHh--cCCc---
Q 017633 8 FPSYLQVLAALGETMKKGTSFGAP------CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--TGRE--- 76 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~~~~~------~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~--~~~~--- 76 (368)
++.+|++.+++.+.+.....+... .+...+++++++++++-...+++++||++|+..++++++.+ .+++
T Consensus 76 ~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~ 155 (474)
T 1wyu_B 76 MKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRT 155 (474)
T ss_dssp CCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccC
Confidence 355688888887763221111110 14577888888888863345778899999999988766532 2333
Q ss_pred --eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 77 --RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 77 --~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+|++.. .+|+.....+...|..+....... .+.. |+++|+++++ ++++++++++.+ ++|
T Consensus 156 r~~Vlv~~-~~h~~~~~~~~~~G~~vv~v~~~~-~~~~-------------d~~~L~~~i~---~~t~~v~~~~pn-~~G 216 (474)
T 1wyu_B 156 RRVVLVPD-SAHGSNPATASMAGYQVREIPSGP-EGEV-------------DLEALKRELG---PHVAALMLTNPN-TLG 216 (474)
T ss_dssp CCEEEEET-TSCTHHHHHHHHTTCEEEEECBCT-TSSB-------------CHHHHHHHCS---TTEEEEEECSSC-TTS
T ss_pred CCEEEEeC-CcChhhHHHHHHCCCEEEEecCCC-CCCc-------------CHHHHHHhhC---CCceEEEEECCC-CCc
Confidence 677766 666666666655555443322211 1111 8999999997 468888887653 467
Q ss_pred cc-cCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchh--hhhhhcc-C----CccceeeeehHHHH
Q 017633 155 FI-APKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIG-G----GLPVGAYGGRRDIM 226 (368)
Q Consensus 155 ~~-~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~-~----G~~iG~v~~~~~~~ 226 (368)
.+ .+ +++|+++|++||+++|+||+|.....+. .....++ +|++ +++|+|+ + |+|+|+++++++++
T Consensus 217 ~~~~~----l~~i~~l~~~~g~~li~Dea~~~~~~g~-~~~~~~g--~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~ 289 (474)
T 1wyu_B 217 LFERR----ILEISRLCKEAGVQLYYDGANLNAIMGW-ARPGDMG--FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLA 289 (474)
T ss_dssp CCCTT----HHHHHHHHHHHTCEEEEEGGGGGGTTTT-CCHHHHT--CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGG
T ss_pred ccCCC----HHHHHHHHHHcCCEEEEeCchhhhhccC-CCcccCC--CcEEEEeCccccccCCCCCCCCeEEEEEcHHHH
Confidence 66 34 9999999999999999999996442221 1122333 4654 5689997 2 36999999998887
Q ss_pred HHhcCC-----C-Cc----------cccccCCCCHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 227 EMVAPA-----G-PM----------YQAGTLSGNPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 227 ~~~~~~-----~-~~----------~~~~t~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
+.+... + .+ ....+++.+.+++.++.+.++.+..+.+ .+++.++++++.+.|++. ++
T Consensus 290 ~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~----g~ 365 (474)
T 1wyu_B 290 PYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK----GY 365 (474)
T ss_dssp GGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC
T ss_pred HhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----Cc
Confidence 766520 0 00 0112334677888888877765433333 566667777777777663 22
Q ss_pred ceEEeeccce--EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC-----CCcccccc--CCCHHHHHHHH
Q 017633 288 AICGGYISGM--FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSL--AHSSDDIQHTI 358 (368)
Q Consensus 288 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~~~~~~--~~~~~~i~~~~ 358 (368)
.... +...+ +++.+ . ...+..++++.|.++||.+.... ...+++++ ..+++++++++
T Consensus 366 ~~~~-~~~~~~~~~~~~-~------------~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~ 431 (474)
T 1wyu_B 366 RVPY-DGPSMHEFVAQP-P------------EGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFA 431 (474)
T ss_dssp BCSS-CSSCCSCEEEBC-S------------TTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHH
T ss_pred EecC-CCCcceEEEEEc-C------------CCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHH
Confidence 2111 11112 33332 0 11235789999999999864221 22345544 34899999999
Q ss_pred HHHHHHHh
Q 017633 359 TAAEKVLR 366 (368)
Q Consensus 359 ~~l~~~l~ 366 (368)
++|+++++
T Consensus 432 ~~L~~~~~ 439 (474)
T 1wyu_B 432 EAMGALLK 439 (474)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99998875
No 175
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=4e-23 Score=188.69 Aligned_cols=314 Identities=16% Similarity=0.086 Sum_probs=191.0
Q ss_pred CceeccCCCcH----HHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 2 PQLIILFPSYL----QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 2 ~~~~~~g~~~~----~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
+..+.+++++| ++++++.+.+... .++.+.+...++++.++++++.. ++++++||++|++.+++.+. ..+++.
T Consensus 22 ~~~~~l~~~~p~~~~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~-~~i~~~~gt~al~~~l~~~~-~~~gd~ 98 (391)
T 3dr4_A 22 SDLPRISVAAPRLDGNERDYVLECMDTT-WISSVGRFIVEFEKAFADYCGVK-HAIACNNGTTALHLALVAMG-IGPGDE 98 (391)
T ss_dssp ------CCCCCCCCSSHHHHHHHHHHHT-CCSSCSHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHT-CCTTCE
T ss_pred CCCceeccCCCCCCHHHHHHHHHHHHcC-CccCCChHHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHcC-CCCcCE
Confidence 34556666554 5778887777653 22235788999999999998643 78889999999999997662 346789
Q ss_pred EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCccc
Q 017633 78 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 157 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (368)
|++..++|++....+. ..|..+.........+.. |++++++.++ +++++++++ +++|...
T Consensus 99 vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-------------d~~~l~~~~~---~~~~~v~~~---n~tG~~~ 158 (391)
T 3dr4_A 99 VIVPSLTYIASANSVT-YCGATPVLVDNDPRTFNL-------------DAAKLEALIT---PRTKAIMPV---HLYGQIC 158 (391)
T ss_dssp EEEESSSCTHHHHHHH-HTTCEEEEECBCTTTCSB-------------CGGGSGGGCC---TTEEEECCB---CGGGCCC
T ss_pred EEECCCchHHHHHHHH-HCCCEEEEEecCccccCc-------------CHHHHHHhcC---CCceEEEEE---CCCCChh
Confidence 9999999888654443 333333221111111111 7888888876 467777642 3567766
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEehhhhc-h-hcccCccccccCCCcchh--hhh--hhccCCccceeeeeh-HHHHHHhc
Q 017633 158 PKPDFLNAIRRITKENGALLIFDEVMTG-F-RLAYGGAQEYFGVTPDLT--TLG--KIIGGGLPVGAYGGR-RDIMEMVA 230 (368)
Q Consensus 158 ~~~~~l~~i~~l~~~~~~~li~De~~~~-~-~~g~~~~~~~~~~~~di~--s~s--K~~~~G~~iG~v~~~-~~~~~~~~ 230 (368)
+ +++|+++|++||+++|+||+|+. . ..+ ...+..+|+. ||| |++++ .+.|+++.+ +.+.+.+.
T Consensus 159 ~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~~di~~~S~s~~K~l~~-g~gg~~~~~~~~~~~~~~ 228 (391)
T 3dr4_A 159 D----MDPILEVARRHNLLVIEDAAEAVGATYRG-----KKSGSLGDCATFSFFGNAIITT-GEGGMITTNDDDLAAKMR 228 (391)
T ss_dssp C----HHHHHHHHHHTTCEEEEECTTCTTCEETT-----EETTSSSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHH
T ss_pred h----HHHHHHHHHHcCCEEEEECcccccceECC-----eeecccCCEEEEECCCCCcCCc-CCeEEEEECCHHHHHHHH
Confidence 6 99999999999999999999963 2 211 1222223554 444 88865 468888665 45554443
Q ss_pred C---CCC--------ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-------
Q 017633 231 P---AGP--------MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG------- 292 (368)
Q Consensus 231 ~---~~~--------~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~------- 292 (368)
. .+. ...+.++..+.+.++++...++.+ +.+.++.+++.+++++.|.++ +......
T Consensus 229 ~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~ 302 (391)
T 3dr4_A 229 LLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERV--DEHLAARERVVGWYEQKLARL----GNRVTKPHVALTGR 302 (391)
T ss_dssp HHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHGGG----TTSEECCCCCTTSC
T ss_pred HHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcC----CccccCcCCCCCCc
Confidence 1 110 011223456667666655554433 334556666666666666554 2221111
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc------------------------cc--cc
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA------------------------GF--TS 346 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~------------------------~~--~~ 346 (368)
....++++.+... ...+..++.+.|.++||.++++..+. ++ +.
T Consensus 303 ~~~~~~~i~~~~~-----------~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~ 371 (391)
T 3dr4_A 303 HVFWMYTVRLGEG-----------LSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH 371 (391)
T ss_dssp CCCSSEEEEECSS-----------CSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC
T ss_pred ceeEEEEEEECCc-----------cchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC
Confidence 1222345554210 02235789999999999999774221 12 23
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q 017633 347 LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 347 ~~~~~~~i~~~~~~l~~~l 365 (368)
..++++|+++++++|++++
T Consensus 372 ~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 372 AGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TTCCHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 5679999999999998764
No 176
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=1.7e-23 Score=189.51 Aligned_cols=308 Identities=15% Similarity=0.046 Sum_probs=193.2
Q ss_pred eeccCCCcHH----HHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEE
Q 017633 4 LIILFPSYLQ----VLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 79 (368)
Q Consensus 4 ~~~~g~~~~~----v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi 79 (368)
.+.++++++. +++++.+.+... .+++.+...++++.++++++. +++++++||++|++.+++.+. ..+++.|+
T Consensus 4 ~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~~-~~~~~~~sGt~al~~al~~~~-~~~gd~Vi 79 (367)
T 3nyt_A 4 FIDLKNQQARIKDKIDAGIQRVLRHG--QYILGPEVTELEDRLADFVGA-KYCISCANGTDALQIVQMALG-VGPGDEVI 79 (367)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHC--CCSSCHHHHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHTT-CCTTCEEE
T ss_pred cccccccccccCHHHHHHHHHHHhcC--CccCChHHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHhC-CCCcCEEE
Confidence 3445655544 455555555442 334667889999999999864 389999999999999998662 34678999
Q ss_pred EEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 80 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
+..++|++...... ..|..+.........+.. |+++++++++ +++++++. + +.+|...+
T Consensus 80 ~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~--~-~~~G~~~~- 138 (367)
T 3nyt_A 80 TPGFTYVATAETVA-LLGAKPVYVDIDPRTYNL-------------DPQLLEAAIT---PRTKAIIP--V-SLYGQCAD- 138 (367)
T ss_dssp EESSSCTHHHHHHH-HTTCEEEEECBCTTTCSB-------------CGGGTGGGCC---TTEEEECC--B-CGGGCCCC-
T ss_pred ECCCccHHHHHHHH-HcCCEEEEEecCCccCCc-------------CHHHHHHhcC---cCCcEEEe--e-CCccChhh-
Confidence 98888877544433 334333222111111111 7888888886 47777773 3 34566666
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh-ch-hcccCccccccCCCcchhhh----hhhccC-Cccceeeee-hHHHHHHhcC
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTL----GKIIGG-GLPVGAYGG-RRDIMEMVAP 231 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~-~~-~~g~~~~~~~~~~~~di~s~----sK~~~~-G~~iG~v~~-~~~~~~~~~~ 231 (368)
+++|.++|++||++||+||+|+ |. ..+. ..+...|+.++ +|.+++ |. .|+++. ++++.+.+..
T Consensus 139 ---~~~i~~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~ 209 (367)
T 3nyt_A 139 ---FDAINAIASKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQ 209 (367)
T ss_dssp ---HHHHHHHHHHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHH
Confidence 9999999999999999999996 23 2221 22222266554 499987 76 888877 4667665542
Q ss_pred ---CCCc------cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeccceEEEE
Q 017633 232 ---AGPM------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFF 301 (368)
Q Consensus 232 ---~~~~------~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~ 301 (368)
.+.. ..+.++..+++.++++...++.+ +++.++.+++.+++++.|.+.....+... ........+.+.
T Consensus 210 ~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 287 (367)
T 3nyt_A 210 IARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIF--EEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVR 287 (367)
T ss_dssp HTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEE
T ss_pred HHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEE
Confidence 1110 11346678888888888877655 34556667777777777766421111100 001111122222
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-Cc-----------------------ccc--ccCCCHHHHH
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EA-----------------------GFT--SLAHSSDDIQ 355 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~-----------------------~~~--~~~~~~~~i~ 355 (368)
+ . +..++.+.|.++||.++.... +. +++ ...++++|++
T Consensus 288 ~--------------~--~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~ 351 (367)
T 3nyt_A 288 M--------------D--NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIK 351 (367)
T ss_dssp C--------------S--SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred e--------------C--CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHH
Confidence 1 1 247889999999999987642 11 122 3466999999
Q ss_pred HHHHHHHH
Q 017633 356 HTITAAEK 363 (368)
Q Consensus 356 ~~~~~l~~ 363 (368)
++++.|++
T Consensus 352 ~v~~~~~~ 359 (367)
T 3nyt_A 352 IICAALTN 359 (367)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99999875
No 177
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.90 E-value=1.9e-23 Score=189.37 Aligned_cols=305 Identities=11% Similarity=0.059 Sum_probs=186.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCC--CCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 87 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~ 87 (368)
-++++++++. .++.+.....++++.+++.++. .+++++++||++|+..+++.+ ++|.|++..+.||+
T Consensus 42 ~~~~v~~a~~-------~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~----~gd~Vl~~~~~y~~ 110 (374)
T 2aeu_A 42 IDEKDKALLN-------TYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL----KPKKVIHYLPELPG 110 (374)
T ss_dssp CCHHHHHHHT-------STTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH----CCSEEEEECSSSSC
T ss_pred CCHHHHHHHH-------HhcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC----CCCEEEEecCCCCc
Confidence 3456666664 2333445556777777777753 378999999999999999855 67899999999988
Q ss_pred Cchh--hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE-EEEcccCCCCCcccCCHHHHH
Q 017633 88 HADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA-IILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 88 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~l~ 164 (368)
+... .....|. +++.+ .|++++++. + +++++ +++++.+|++|. +...++
T Consensus 111 ~~~~~~~~~~~g~-------------------~~~~v--~d~~~l~~~-~---~~~~~~v~~~~p~nptG~---~~~~l~ 162 (374)
T 2aeu_A 111 HPSIERSCKIVNA-------------------KYFES--DKVGEILNK-I---DKDTLVIITGSTMDLKVI---ELENFK 162 (374)
T ss_dssp CTHHHHHHHHTTC-------------------EEEEE--SCHHHHHTT-C---CTTEEEEEECBCTTSCBC---CHHHHH
T ss_pred cHHHHHHHHHcCc-------------------EEEEe--CCHHHHHhc-C---CCccEEEEEccCCCCCCC---CcccHH
Confidence 6431 1222222 12222 288998887 3 46778 888777666663 233399
Q ss_pred HHHHHHHHhCCEEEEehhhhchhcccCcc--ccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCCCccccccCC
Q 017633 165 AIRRITKENGALLIFDEVMTGFRLAYGGA--QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 242 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~~~g~~~~--~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~~~~~~~t~~ 242 (368)
+|.++|++||+++|+||+|..+..+.... ...++.+.-+.|+||+++ |+|+||+++++++++.+... ......+
T Consensus 163 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~-g~~~G~~~~~~~~~~~l~~~---~~~~~~~ 238 (374)
T 2aeu_A 163 KVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLME-GPRGGLLAGKKELVDKIYIE---GTKFGLE 238 (374)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSS-SCSCEEEEEEHHHHHHHHHH---HHTTTCB
T ss_pred HHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCccccc-CcceEEEEECHHHHHHHHHh---hccccCC
Confidence 99999999999999999996542111100 112233222347999976 57999999999988877631 1222335
Q ss_pred CCHHHHHHHHHHHHHHccCCHHHHHHHHHHHH----HHHHHHHHHhc----CCceEEeeccceEEEEeecCCCcccchhc
Q 017633 243 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGEL----TQGIIDAGKKA----GHAICGGYISGMFGFFFTEGPVYNFEDAK 314 (368)
Q Consensus 243 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l----~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (368)
.+++.++++.++++.+. .+..++..++.+.+ ++.|.+.+... ++.....+.+.++++.-. . ..
T Consensus 239 ~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~---~~---- 309 (374)
T 2aeu_A 239 AQPPLLAGIYRALKNFN-LERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYK-D---DT---- 309 (374)
T ss_dssp CCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEES-S---HH----
T ss_pred CCHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecc-c---cc----
Confidence 78899999988888652 21344555555555 56666654432 222222333444333210 0 00
Q ss_pred ccccHHHHHHHHHHH-HcCeeecCCCC-----CccccccCC---CHHHHHHHHHHHHHHHhh
Q 017633 315 KSETTKFARFYRGML-EEGVYFAPSQF-----EAGFTSLAH---SSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 315 ~~~~~~~~~~~~~l~-~~Gi~~~~~~~-----~~~~~~~~~---~~~~i~~~~~~l~~~l~~ 367 (368)
....+..+++..++ ++||.+.++.. ..+|+++.. .+.+++++.+.|++++.+
T Consensus 310 -~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 310 -INIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp -HHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred -ccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 00011234665554 67999998742 234554432 223488888888888765
No 178
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=4.3e-22 Score=181.54 Aligned_cols=254 Identities=14% Similarity=0.102 Sum_probs=170.7
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...++++.++++++..+.+++ +||++|+..+++.+ ..+++.|++..+.|++..........
T Consensus 49 ~~~~~~~~l~~~la~~~~~~~~i~~-~sGt~a~~~~~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~------------ 113 (386)
T 1cs1_A 49 RGNPTRDVVQRALAELEGGAGAVLT-NTGMSAIHLVTTVF--LKPGDLLVAPHDCYGGSYRLFDSLAK------------ 113 (386)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEE-SSHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHHHT------------
T ss_pred CCCccHHHHHHHHHHHhCCCcEEEe-CCHHHHHHHHHHHH--hCCCCEEEEecCCcHhHHHHHHHHHH------------
Confidence 4567789999999999975455555 56899999999876 35678999999988864322211100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~ 188 (368)
..+.++..++.+|++++++.++ ++++++++++.++++|.+.+ +++|+++|++||+++|+||+|+++ ..
T Consensus 114 ----~~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~ 182 (386)
T 1cs1_A 114 ----RGCYRVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREVGAVSVVDNTFLSPALQ 182 (386)
T ss_dssp ----TTSCEEEEECTTCHHHHHHHHH---TCCSEEEEECSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCTTTC
T ss_pred ----hcCCEEEEeCCCCHHHHHHhhc---cCCcEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 1122344555568999999998 46788888888888898887 999999999999999999999866 22
Q ss_pred ccCccccccCCCcchhhhhhhcc-CCccc-eeeeehH-HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 189 AYGGAQEYFGVTPDLTTLGKIIG-GGLPV-GAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 189 g~~~~~~~~~~~~di~s~sK~~~-~G~~i-G~v~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
. .. .++.+..+.|+||+++ +|.++ |++++++ ++++.+.. .....+.+.++++++++.++++.+ +...+
T Consensus 183 -~--~~-~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~ 253 (386)
T 1cs1_A 183 -N--PL-ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW---WANNIGVTGGAFDSYLLLRGLRTL--VPRME 253 (386)
T ss_dssp -C--GG-GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH---HHHHHTCBCCHHHHHHHHHHHTTH--HHHHH
T ss_pred -C--cc-ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhcccHH--HHHHH
Confidence 1 11 2444444568999998 46776 9998875 77777752 223334567888888776666533 22344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceE------------------EeeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
+..++.+.+.+.+++. +.... ..+.++++.+.+.. . ..++.+.
T Consensus 254 ~~~~~~~~l~~~l~~~----~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~--~~~~~~~ 314 (386)
T 1cs1_A 254 LAQRNAQAIVKYLQTQ----PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------------D--EQTLRRF 314 (386)
T ss_dssp HHHHHHHHHHHHHTTC----TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------------C--HHHHHHH
T ss_pred HHHHHHHHHHHHHhcC----CCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------------C--HHHHHHH
Confidence 4555555555555442 11100 12336677776521 1 3567788
Q ss_pred HHHcCeeecC
Q 017633 328 MLEEGVYFAP 337 (368)
Q Consensus 328 l~~~Gi~~~~ 337 (368)
|.++||.+++
T Consensus 315 l~~~gi~~~~ 324 (386)
T 1cs1_A 315 LGGLSLFTLA 324 (386)
T ss_dssp HHTCSSSEEB
T ss_pred HHhCCcceEc
Confidence 8889998874
No 179
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.90 E-value=2.4e-23 Score=193.21 Aligned_cols=287 Identities=11% Similarity=0.088 Sum_probs=184.5
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
..+...+++++++++++. +++++++||++|+..++++ ..+++.|++..+.|++.......
T Consensus 131 g~~~~~~l~~~la~~~g~-~~~i~~~sGt~al~~~l~~---~~~Gd~Vi~~~~~y~~~~~~~~~---------------- 190 (464)
T 1ibj_A 131 GNPTRDALESLLAKLDKA-DRAFCFTSGMAALSAVTHL---IKNGEEIVAGDDVYGGSDRLLSQ---------------- 190 (464)
T ss_dssp CCHHHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHTT---SCTTCEEEEESSCCHHHHHHHHH----------------
T ss_pred CCHHHHHHHHHHHHHhCC-CeEEEECCHHHHHHHHHHH---hCCCCEEEEECCCchhHHHHHHH----------------
Confidence 455788899999998863 4778888999999887752 35778999999988764321100
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 190 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~ 190 (368)
.....+.+++.++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++||+++|+||+|.. +.
T Consensus 191 ~~~~~G~~v~~v~~~d~~~l~~~i~---~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~---g~ 260 (464)
T 1ibj_A 191 VVPRSGVVVKRVNTTKLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMS---PV 260 (464)
T ss_dssp TSGGGTCEEEEECTTSHHHHHHHCC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTC---TT
T ss_pred HHHHcCCEEEEeCCCCHHHHHHHhc---cCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCcc---cc
Confidence 0111233455566668999999997 47899999998888898887 99999999999999999999963 22
Q ss_pred CccccccCCCcchhhhhhhccC--Cccceeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHHHH
Q 017633 191 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 267 (368)
Q Consensus 191 ~~~~~~~~~~~di~s~sK~~~~--G~~iG~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~ 267 (368)
......++.+..+.++||++++ |+++||++++ +++++.+.. .......+.+++.+.++.++++.+ +...++.
T Consensus 261 ~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~---~~~~~g~~~~~~~~~a~~~al~~~--~~r~~~~ 335 (464)
T 1ibj_A 261 LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF---LQNSEGSGLAPFDCWLCLRGIKTM--ALRIEKQ 335 (464)
T ss_dssp TCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHH---HHHHTTCBCCHHHHHHHHHHHTTH--HHHHHHH
T ss_pred cCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHH---HHHhcCCCCCHHHHHHHHhchhhH--HHHHHHH
Confidence 1111113433334589999985 7899999887 477777652 122233456788888877776532 1122333
Q ss_pred HHHHHHHHHHHHHH----------HHhcCCce----EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCe
Q 017633 268 NKITGELTQGIIDA----------GKKAGHAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 333 (368)
Q Consensus 268 ~~~~~~l~~~l~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 333 (368)
..+.+.+.+.+++. +.+.+... ...+.++++++.+. .......+.+.|...||
T Consensus 336 ~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-------------~~~~~~~~~~~L~~~gi 402 (464)
T 1ibj_A 336 QENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-------------SVALSKHLVETTKYFSI 402 (464)
T ss_dssp HHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-------------CHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-------------CHHHHHHHHHhcCcceE
Confidence 33333443433321 11111000 11234567777762 11123457777777788
Q ss_pred eecCCC---------------------------CCccccccCCCHHHHHHHHHHHHHHHhh
Q 017633 334 YFAPSQ---------------------------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 334 ~~~~~~---------------------------~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.++.|+ ...+|++... +++++++++|++++++
T Consensus 403 ~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 403 AVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred eecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 877663 1123444444 8999999999999875
No 180
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.90 E-value=3.9e-22 Score=181.04 Aligned_cols=314 Identities=13% Similarity=0.045 Sum_probs=191.3
Q ss_pred eccC--CCcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH-hcCCceEEEE
Q 017633 5 IILF--PSYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA-FTGRERIIKF 81 (368)
Q Consensus 5 ~~~g--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~-~~~~~~vi~~ 81 (368)
++|+ ..+|++++++.+++... +..+.+...++++.++++++. +++++++||++|+..+++.+.. ..+++.|++.
T Consensus 4 i~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~~-~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 4 FAYSEPCLDKEDKKAVLEVLNSK--QLTQGKRSLLFEEALCEFLGV-KHALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp EESCCCCCCHHHHHHHHHHHTSS--CCSSSHHHHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred cccCCCCCCHHHHHHHHHHHHcC--cccCChHHHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 4453 36789999999988753 234567788999999999863 3899999999999999986621 2457889999
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
.++|++....... .|..+........ +. .|++++++.++ ++++++++.+. +|.+.+
T Consensus 81 ~~~~~~~~~~~~~-~g~~~~~~~~~~~-~~-------------~d~~~l~~~i~---~~~~~v~~~~~---tG~~~~--- 136 (375)
T 2fnu_A 81 PISFVATANMLLE-SGYTPVFAGIKND-GN-------------IDELALEKLIN---ERTKAIVSVDY---AGKSVE--- 136 (375)
T ss_dssp SSSCTHHHHHHHH-TTCEEEECCBCTT-SS-------------BCGGGSGGGCC---TTEEEEEEECG---GGCCCC---
T ss_pred CCccHhHHHHHHH-CCCEEEEeccCCC-CC-------------CCHHHHHhhcC---cCceEEEEeCC---cCCccC---
Confidence 9888876544333 3333322111111 11 17888888876 35776555443 677777
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh--hhccCCccceeeee-h-HHHHHHhcCCCC-cc
Q 017633 162 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG-R-RDIMEMVAPAGP-MY 236 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~-~-~~~~~~~~~~~~-~~ 236 (368)
+++|.++|++||+++|+||+|+............++ ..++.|+| |.+++ ++|++++ + +++++.+..... ..
T Consensus 137 -l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~ 212 (375)
T 2fnu_A 137 -VESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPITT--AEGGAVVTNDSELHEKMKLFRSHGM 212 (375)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSSCC--SSCEEEEESCHHHHHHHHHHTBTTE
T ss_pred -HHHHHHHHHHcCCEEEEECccccCCeECCeeccccC-CeEEEeCCCCCCccc--cCceEEEeCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999643110110011112 24566888 99965 4788766 3 666655432110 00
Q ss_pred ------------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe------eccceE
Q 017633 237 ------------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG------YISGMF 298 (368)
Q Consensus 237 ------------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~------~~~~~~ 298 (368)
.+.++..+++.++++...++.+ +.+.++.+++++++++.|++ .+...... ....++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~ 286 (375)
T 2fnu_A 213 LKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQKREEAALTYDRIFKD----NPYFTPLHPLLKDKSSNHLY 286 (375)
T ss_dssp EESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTT----CSSEEESGGGCSSCCCCSCE
T ss_pred ccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhc----CCCccccCCCCCCCcceEEE
Confidence 1122345666665554443222 22344455555555555444 32111111 112334
Q ss_pred EEEeecCCCcccchhcccccH-HHHHHHHHHHHcCeeecCCCC-------------------------Cccccc--cCCC
Q 017633 299 GFFFTEGPVYNFEDAKKSETT-KFARFYRGMLEEGVYFAPSQF-------------------------EAGFTS--LAHS 350 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~~~~~~~-------------------------~~~~~~--~~~~ 350 (368)
++.+.. ... +..++.+.|.++||.++.... ..+|++ ...+
T Consensus 287 ~~~~~~------------~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t 354 (375)
T 2fnu_A 287 PILMHQ------------KFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLN 354 (375)
T ss_dssp EEEECG------------GGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCC
T ss_pred EEEeCc------------cccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCC
Confidence 555421 111 357899999999999983211 124443 3459
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017633 351 SDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 351 ~~~i~~~~~~l~~~l~~ 367 (368)
++|+++++++|++++++
T Consensus 355 ~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 355 LESVQNIAHSVLKTFES 371 (375)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 181
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.90 E-value=2.8e-22 Score=182.74 Aligned_cols=284 Identities=15% Similarity=0.105 Sum_probs=186.8
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhh---hhhcCCCccccCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLP 106 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 106 (368)
++++...+++++++++++.. ++++++||++|+..+++.+ ..+++.|++..+.|++..... +...|.
T Consensus 56 ~~~~~~~~l~~~la~~~g~~-~~i~~~sG~~ai~~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~-------- 124 (389)
T 3acz_A 56 LGNPTVEQFEEMVCSIEGAA-GSAAFGSGMGAISSSTLAF--LQKGDHLIAGDTLYGCTVSLFTHWLPRFGI-------- 124 (389)
T ss_dssp TCCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHTTT--CCTTCEEEEESSCCHHHHHHHHHHHHHTTC--------
T ss_pred CCChHHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHHHcCC--------
Confidence 45678899999999998744 6777778999999998755 356789999999888754433 222222
Q ss_pred CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 107 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
++..++..|++++++.++ ++++++++++.++++|.+.+ +++|+++|++||+++|+||+|+.+
T Consensus 125 -----------~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~livD~~~~~~ 186 (389)
T 3acz_A 125 -----------EVDLIDTSDVEKVKAAWK---PNTKMVYLESPANPTCKVSD----IKGIAVVCHERGARLVVDATFTSP 186 (389)
T ss_dssp -----------EEEEECTTCHHHHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT
T ss_pred -----------EEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 234444458999999887 47899999998888898888 999999999999999999999754
Q ss_pred hcccCccccccCCCcchh--hhhhhcc-CCccc-eeeeehH-HHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC
Q 017633 187 RLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPV-GAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 261 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~--s~sK~~~-~G~~i-G~v~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 261 (368)
..+. ..+..+|++ |+||+++ +|.|+ |++++++ ++++.+.. .......+.++..+.++...++.+ +
T Consensus 187 ~~~~-----~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~---~~~~~g~~~~~~~~~~~~~~l~~l--~ 256 (389)
T 3acz_A 187 CFLK-----PLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKF---YRKDAGSLMAPMDAFLCARGMKTL--P 256 (389)
T ss_dssp TTCC-----GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHTTH--H
T ss_pred cccC-----ccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHH---HHHhcCCCCCHHHHHHHHcCccHH--H
Confidence 1111 122345655 8999999 46888 9999988 88877752 221122345777777776666533 2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH--h--cC-Cc-----e----EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 262 GTYEYLNKITGELTQGIIDAGK--K--AG-HA-----I----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 262 ~~~~~~~~~~~~l~~~l~~~~~--~--~~-~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
...++..++.+.+.+.+++... + ++ +. . ...+.++++.+.+. . ..+..+.
T Consensus 257 ~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~-------------~---~~~~~~~ 320 (389)
T 3acz_A 257 IRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK-------------S---FEAAKKL 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES-------------S---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC-------------C---HHHHHHH
Confidence 2344555666666666665310 0 00 00 0 01234667777652 1 2455666
Q ss_pred HHHcCeeecCC--C-------CC-------------------ccccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 328 MLEEGVYFAPS--Q-------FE-------------------AGFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 328 l~~~Gi~~~~~--~-------~~-------------------~~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
|.+.|+.+... | .+ ...+++....++++++++.|+++++++
T Consensus 321 l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~~ 389 (389)
T 3acz_A 321 MEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALELW 389 (389)
T ss_dssp HTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTCC
T ss_pred HHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 66778776552 1 00 012233444558888899998888653
No 182
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.90 E-value=1e-23 Score=191.52 Aligned_cols=305 Identities=13% Similarity=0.090 Sum_probs=184.2
Q ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhh
Q 017633 14 VLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 93 (368)
Q Consensus 14 v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~ 93 (368)
+++++.+.+... .+++.+...++++.++++++.. ++++++||++|++.+++.+. ..+++.|++..++|++.....
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~~~-~~~~~~~gt~a~~~~~~~~~-~~~gd~v~~~~~~~~~~~~~~- 95 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFEKRFAALHNAP-HAIGVGTGTDALAMSFKMLN-IGAGDEVITCANTFIASVGAI- 95 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHTTCS-EEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCHHHHHHH-
T ss_pred HHHHHHHHHHcC--CcccChhHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHcC-CCCCCEEEECCCccHHHHHHH-
Confidence 666776666553 3346788999999999999643 78899999999999987652 346789999999888764443
Q ss_pred hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 017633 94 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 173 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~ 173 (368)
...|..+...... ..+.. |++++++.++ +++++++ ++ +++|...+ +++|+++|++|
T Consensus 96 ~~~g~~~~~~~~~-~~~~~-------------d~~~l~~~~~---~~~~~v~--~~-n~~G~~~~----~~~i~~~~~~~ 151 (374)
T 3uwc_A 96 VQAGATPVLVDSE-NGYVI-------------DPEKIEAAIT---DKTKAIM--PV-HYTGNIAD----MPALAKIAKKH 151 (374)
T ss_dssp HHTTCEEEEECBC-TTSSB-------------CGGGTGGGCC---TTEEEEC--CB-CGGGCCCC----HHHHHHHHHHT
T ss_pred HHcCCEEEEEecC-CCCCc-------------CHHHHHHhCC---CCceEEE--Ee-CCcCCcCC----HHHHHHHHHHc
Confidence 3333333221111 11111 7888888886 3677766 33 45677776 99999999999
Q ss_pred CCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccC-Cccceeeeeh-HHHHHHhcC---CCC---c---ccc
Q 017633 174 GALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGG-GLPVGAYGGR-RDIMEMVAP---AGP---M---YQA 238 (368)
Q Consensus 174 ~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~-G~~iG~v~~~-~~~~~~~~~---~~~---~---~~~ 238 (368)
|+++|+||+|+.+ ..+....++..+|++++| |++++ |. .|+++.+ +.+.+.+.. .+. + ..+
T Consensus 152 ~~~li~D~~~~~g---~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (374)
T 3uwc_A 152 NLHIVEDACQTIL---GRINDKFVGSWGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYG 227 (374)
T ss_dssp TCEEEEECTTCTT---CEETTEETTSSSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCC
T ss_pred CCEEEEeCCCccC---ceeCCeeccccccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCcccccc
Confidence 9999999999732 112223444445776555 99986 65 7887764 455544432 110 0 012
Q ss_pred ccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeecCCCcccchhcccc
Q 017633 239 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 239 ~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.++..+.+.++.+...++.+ +.+.++.+++.+++++.|.++......+.... ....+..+.+.
T Consensus 228 ~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 291 (374)
T 3uwc_A 228 INCRMDTIQAVIANRLMNQL--ETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLR-------------- 291 (374)
T ss_dssp CBCBCCHHHHHHHHHHGGGH--HHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEE--------------
T ss_pred ccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEE--------------
Confidence 23344566555544443322 22444455555555555444210010110000 11111122221
Q ss_pred cHHHHHHHHHHHHcCeeecCCCC-C--------------------------cccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQF-E--------------------------AGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~-~--------------------------~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+..++.+.|.++||.++++.. + .+++ ...++++|+++++++|++++++
T Consensus 292 ~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 292 VKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp ETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 11357899999999999988751 1 1122 3457999999999999999864
No 183
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.90 E-value=1.3e-21 Score=180.61 Aligned_cols=307 Identities=12% Similarity=0.029 Sum_probs=189.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCc
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 89 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 89 (368)
.++++++++.+.+... .|....+...++++.++++++. +++++++||++|++.+++.+. .++.|++..++|++..
T Consensus 30 ~p~~~~~a~~~~~~~~-~y~~~~~~~~~l~~~la~~~~~-~~v~~~~ggt~al~~~l~~l~---~gd~Vlv~~~~~~~~~ 104 (424)
T 2po3_A 30 DRARLYERLDRALDSQ-WLSNGGPLVREFEERVAGLAGV-RHAVATCNATAGLQLLAHAAG---LTGEVIMPSMTFAATP 104 (424)
T ss_dssp CHHHHHHHHHHHHHHT-CCSSSCHHHHHHHHHHHHHHTS-SEEEEESCHHHHHHHHHHHHT---CCSEEEEESSSCTHHH
T ss_pred ChHHHHHHHHHHHhcC-CcccCCHHHHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHcC---CCCEEEECCCccHHHH
Confidence 3568999998888753 2221147889999999999853 589999999999999998762 4589999999988765
Q ss_pred hhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH
Q 017633 90 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 169 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l 169 (368)
.. +...|..+.........+.. |++++++.++ ++++++++.+ ++|...+ +++|+++
T Consensus 105 ~~-~~~~G~~~~~v~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~~~---~tG~~~~----l~~i~~l 160 (424)
T 2po3_A 105 HA-LRWIGLTPVFADIDPDTGNL-------------DPDQVAAAVT---PRTSAVVGVH---LWGRPCA----ADQLRKV 160 (424)
T ss_dssp HH-HHHTTCEEEEECBCTTTSSB-------------CHHHHGGGCC---TTEEEEEEEC---GGGCCCC----HHHHHHH
T ss_pred HH-HHHcCCEEEEEecCCCcCCc-------------CHHHHHHhhC---cCCcEEEEEC---CCCCcCC----HHHHHHH
Confidence 43 33334433222111101111 7899988886 3677777643 3566555 9999999
Q ss_pred HHHhCCEEEEehhhh-ch-hcccCccccccCCCcch--hhhh--hhccCCccceeeeeh-HHHHHHhcCC---CC---c-
Q 017633 170 TKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDL--TTLG--KIIGGGLPVGAYGGR-RDIMEMVAPA---GP---M- 235 (368)
Q Consensus 170 ~~~~~~~li~De~~~-~~-~~g~~~~~~~~~~~~di--~s~s--K~~~~G~~iG~v~~~-~~~~~~~~~~---~~---~- 235 (368)
|++||+++|+||+|+ ++ ..+.. ++..+|+ .||| |++++ +|+||++++ +++++.+... +. +
T Consensus 161 a~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~ 234 (424)
T 2po3_A 161 ADEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRALHNFGFDLPGG 234 (424)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTTTCTTC
T ss_pred HHHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhcCcccccc
Confidence 999999999999997 56 33321 2212344 5677 55544 799999988 7777665421 10 0
Q ss_pred --cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-ecc-----ceEEEEeecCCC
Q 017633 236 --YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YIS-----GMFGFFFTEGPV 307 (368)
Q Consensus 236 --~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~ 307 (368)
..+.++..+++.+++++..++.+ +.+.++.+.+++.+.+.+.+.+...... ..+ .++++.+....
T Consensus 235 ~~~~g~~~~~~~~~aa~~l~~~~~~------~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~- 307 (424)
T 2po3_A 235 SPAGGTNAKMSEAAAAMGLTSLDAF------PEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEAT- 307 (424)
T ss_dssp CTTCCCBCCCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHH-
T ss_pred ccccCcCCCcCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCcc-
Confidence 01122344566666655444432 2344444444455555444332111111 111 23334442100
Q ss_pred cccchhcccccHHHHHHHHHHHHcCeeecCCCC-Cc------------------------cccc--cCCCHHHHHHHHHH
Q 017633 308 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EA------------------------GFTS--LAHSSDDIQHTITA 360 (368)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~------------------------~~~~--~~~~~~~i~~~~~~ 360 (368)
...+..++.+.|.++||.+++... +. ++++ ..++++|+++++++
T Consensus 308 ---------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~ 378 (424)
T 2po3_A 308 ---------TGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADL 378 (424)
T ss_dssp ---------HSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHH
T ss_pred ---------chhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHH
Confidence 011246788999999999987321 10 3333 66799999999999
Q ss_pred HHHHHhh
Q 017633 361 AEKVLRQ 367 (368)
Q Consensus 361 l~~~l~~ 367 (368)
|++++.+
T Consensus 379 L~~~~~~ 385 (424)
T 2po3_A 379 LRLCATR 385 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9988753
No 184
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=8.6e-24 Score=191.89 Aligned_cols=312 Identities=16% Similarity=0.056 Sum_probs=186.9
Q ss_pred eccCCCcHH----HHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEE
Q 017633 5 IILFPSYLQ----VLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 80 (368)
Q Consensus 5 ~~~g~~~~~----v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~ 80 (368)
+.+++++|. +++++.+.+... .+.+.+...++++.++++++. +++++++||++|++.+++.+ ...+++.|++
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~~-~~~i~~~sgt~al~~~l~~l-~~~~gd~Vi~ 81 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRN--WFILGDEDKKFEQEFADYCNV-NYCIGCGNGLDALHLILKGY-DIGFGDEVIV 81 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHHTS-SEEEEESCHHHHHHHHHHHT-TCCTTCEEEE
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCC--CccCCchHHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHc-CCCCcCEEEE
Confidence 445555554 555555555543 235678889999999999864 48899999999999999765 2346789999
Q ss_pred EcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCH
Q 017633 81 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (368)
...+|++.... +...|..+.........+.. |+++++++++ +++++++ + ++++|...+
T Consensus 82 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~-------------d~~~l~~~l~---~~~~~v~--~-~n~~G~~~~-- 139 (373)
T 3frk_A 82 PSNTFIATALA-VSYTGAKPIFVEPDIRTYNI-------------DPSLIESAIT---EKTKAII--A-VHLYGQPAD-- 139 (373)
T ss_dssp ETTSCTHHHHH-HHHHSCEEEEECEETTTTEE-------------CGGGTGGGCC---TTEEEEE--E-ECCTTCCCC--
T ss_pred CCCCcHHHHHH-HHHcCCEEEEEeccccccCc-------------CHHHHHHhcC---CCCeEEE--E-ECCCcCccc--
Confidence 99888875444 33334433221111011111 7888888886 3677777 2 345677777
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhh----hhccC-Cccceeeeeh-HHHHHHhc---C
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGG-GLPVGAYGGR-RDIMEMVA---P 231 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~s----K~~~~-G~~iG~v~~~-~~~~~~~~---~ 231 (368)
+++|.++|++||++||+||+|+.. ..+....++..+|+.++| |++++ | +.|+++.+ +++.+.+. .
T Consensus 140 --l~~i~~l~~~~~~~li~D~a~~~g---~~~~~~~~~~~~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~ 213 (373)
T 3frk_A 140 --MDEIKRIAKKYNLKLIEDAAQAHG---SLYKGMKVGSLGDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSN 213 (373)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTCTT---CEETTEETTSSSSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHB
T ss_pred --HHHHHHHHHHcCCEEEEECCcccC---CEECCEeccccccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999632 112223445445776555 88876 5 47787775 45554443 1
Q ss_pred CCC------ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEeec
Q 017633 232 AGP------MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFFTE 304 (368)
Q Consensus 232 ~~~------~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 304 (368)
.+. ...+.++..+.+.++.+...++.+ +.+.++.+++.+++++.|.++. ...+.... ....+..+.+.
T Consensus 214 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~- 288 (373)
T 3frk_A 214 YGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYL--DKWNEERRKIAQKYIAGINNPN--VIIPVEADYAKHVWYTFVIR- 288 (373)
T ss_dssp TTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHCCCTT--EECCCCCTTEECCCSSEEEE-
T ss_pred cCcccCCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCc--eEeccCCCCCceeeEEEEEE-
Confidence 111 111234455777777665555433 2234444444444444443321 11110000 11111112211
Q ss_pred CCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC-C--------------------------cccc--ccCCCHHHHH
Q 017633 305 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-E--------------------------AGFT--SLAHSSDDIQ 355 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~--------------------------~~~~--~~~~~~~~i~ 355 (368)
..+..++.+.|.++||.++++.. + .+++ ...+|++|++
T Consensus 289 -------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~ 355 (373)
T 3frk_A 289 -------------SEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIE 355 (373)
T ss_dssp -------------ESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred -------------eCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHH
Confidence 11357899999999999986541 1 1232 3567999999
Q ss_pred HHHHHHHHHHh
Q 017633 356 HTITAAEKVLR 366 (368)
Q Consensus 356 ~~~~~l~~~l~ 366 (368)
++++.|++...
T Consensus 356 ~~~~~l~~~~~ 366 (373)
T 3frk_A 356 YVIDKINAWKL 366 (373)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHhh
Confidence 99999987653
No 185
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=1.9e-22 Score=182.11 Aligned_cols=304 Identities=12% Similarity=0.002 Sum_probs=191.4
Q ss_pred CcHHHHHHHHHHHHcCC---CCCCCC--hhHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGT---SFGAPC--LLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~---~~~~~~--~~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.+.+.+.. .+.++. +...+++++++++++ +.+++++++||++|+..++..+. .. ++++..
T Consensus 15 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~---~~-~~i~~~ 90 (362)
T 3ffr_A 15 LYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV---EK-KSFHCV 90 (362)
T ss_dssp CCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC---SS-EEEEEE
T ss_pred CCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc---CC-cEEEEc
Confidence 46688988888877632 112221 456788889999886 36789999999999999998662 23 556555
Q ss_pred CCCCCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 83 GCYHGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
..+++.... .....|..+..........+ |+++++ ++ +++++++++++++++|.+.+
T Consensus 91 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~--~~---~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 91 NGSFSKRFYEFAGELGREAYKEEAAFGKGF--------------YPADIT--VP---ADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCTTCCC--------------CGGGCC--CC---TTCCEEEEESEETTTTEECC---
T ss_pred CcHHHHHHHHHHHHhCCCeEEEecCCCCCC--------------CHHHHh--cc---CCccEEEEEcCCCCcceeCC---
Confidence 555542221 22233433322222111111 677777 33 46788888787888899888
Q ss_pred HHHHHHHHHHHh-CCEEEEehhhhchhcccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHHHhcCCC-----
Q 017633 162 FLNAIRRITKEN-GALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAG----- 233 (368)
Q Consensus 162 ~l~~i~~l~~~~-~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~----- 233 (368)
+++|.++|++| |+++|+|++|+... ...... . .|+ .++||+++++.++|++++++++++.+....
T Consensus 149 -l~~i~~la~~~p~~~li~D~a~~~~~--~~~~~~--~--~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 149 -VEDINTFRDKNKDALIFVDAVSSLPY--PKFDWT--K--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKS 221 (362)
T ss_dssp -HHHHTTSGGGSTTSEEEEECTTTTTS--SCCCTT--S--CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHhCCCCEEEEecccccCC--cccChh--H--CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCC
Confidence 99999999999 99999999996321 011111 1 344 467899985556788888888776654210
Q ss_pred -Ccc------------ccccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhc-CCceEE----e
Q 017633 234 -PMY------------QAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKA-GHAICG----G 292 (368)
Q Consensus 234 -~~~------------~~~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~----~ 292 (368)
... .....+.+..++.++.++++.+.+++ ..++..++++++++.|++ . ++.... .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~~~ 297 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIES----SKVFSFGVEDAKL 297 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----CSSEEESSSCGGG
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH----ccCceeccCChhh
Confidence 000 00134567777777778887665433 344444555555555544 4 221111 1
Q ss_pred eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC----CCccccc--cCCCHHHHHHHHHHHHHHH
Q 017633 293 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~--~~~~~~~i~~~~~~l~~~l 365 (368)
..+.++++.+. . +..++.+.|.++||.+.++. ...+|++ ...+++++++++++|++++
T Consensus 298 ~~~~~~~~~~~-------------~--~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 298 RSMTTIVANTT-------------M--LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp BCSSEEEEEES-------------S--CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred cCCceEEEecC-------------C--CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 22445566552 2 35789999999999999763 2235553 4569999999999999875
No 186
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.90 E-value=1.2e-21 Score=181.18 Aligned_cols=321 Identities=13% Similarity=0.042 Sum_probs=185.9
Q ss_pred CCcHHHHHHHHHHHHcCCCCC---CC-----ChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHH-h-----c
Q 017633 9 PSYLQVLAALGETMKKGTSFG---AP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-----T 73 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~~~---~~-----~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~-~-----~ 73 (368)
+.+|++++++.+++.....+. ++ .+...+++++++++++ +++++++++||++|++.+++.+.. + .
T Consensus 29 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~ 108 (432)
T 3a9z_A 29 PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTL 108 (432)
T ss_dssp CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhcccc
Confidence 568999999999887632221 11 1235799999999987 567999999999999999977631 1 3
Q ss_pred CCceEEEEcCCCCCCch---------------hhh-hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC
Q 017633 74 GRERIIKFEGCYHGHAD---------------PFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 137 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~ 137 (368)
+++.|++..++|++... ..+ ...|..+.........+. .|+++|++.++
T Consensus 109 ~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~-------------~d~~~l~~~i~-- 173 (432)
T 3a9z_A 109 QGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQ-------------VEVEDILAAVR-- 173 (432)
T ss_dssp C------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSS-------------CCHHHHHHTCC--
T ss_pred CCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCC-------------cCHHHHHHhcc--
Confidence 56889999999987521 011 112332222211110111 17999998887
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC----------CEEEEehhhhchhcccCccccccCCCcch--hh
Q 017633 138 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG----------ALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TT 205 (368)
Q Consensus 138 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~----------~~li~De~~~~~~~g~~~~~~~~~~~~di--~s 205 (368)
++++++++++.++++|.+.+ +++|.++|++|| +++|+||+|.... .......+ .+|+ .|
T Consensus 174 -~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~--~~~~~~~~--~~d~~~~s 244 (432)
T 3a9z_A 174 -PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK--RRVDVEDL--GVDFLTIV 244 (432)
T ss_dssp -TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT--SCCCHHHH--CCSEEEEE
T ss_pred -CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC--cccChhhc--CCCEEEEe
Confidence 46888888888888999888 899999999999 9999999995321 11122222 3454 47
Q ss_pred hhhhccCCccceeeeehHHH-HHHhcCCC----CccccccCCCCHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHH
Q 017633 206 LGKIIGGGLPVGAYGGRRDI-MEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGI 278 (368)
Q Consensus 206 ~sK~~~~G~~iG~v~~~~~~-~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l 278 (368)
+||.+| +|+||++++++. ...+.... ......+++.+..+++++.++++.+.+ +.+.++++++++++.+.|
T Consensus 245 ~~K~~g--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L 322 (432)
T 3a9z_A 245 GHKFYG--PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERL 322 (432)
T ss_dssp GGGTTC--CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhcC--CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 799874 579999998764 22232100 001223346788888888888886643 345566667777777777
Q ss_pred HHHH-HhcCCce---EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH----HcCeeecCC------------
Q 017633 279 IDAG-KKAGHAI---CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML----EEGVYFAPS------------ 338 (368)
Q Consensus 279 ~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~Gi~~~~~------------ 338 (368)
+++. ....... .....+.++++.+.... .+..++.+.+. +.|+.+.++
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~ 390 (432)
T 3a9z_A 323 EAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ------------LRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSC 390 (432)
T ss_dssp HHHHGGGEEESSCCTTCCBCTTEEEEEECSTT------------CCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHT
T ss_pred HhccCCcEEEeCCCCcccCCCCEEEEEeCCCC------------CcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhc
Confidence 6642 1110000 00123345566653210 01234444331 223333221
Q ss_pred C------CCccccc--cCCCHHHHHHHHHHHHHHHhh
Q 017633 339 Q------FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 339 ~------~~~~~~~--~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+ ...+|++ ..++++|+++++++|++++++
T Consensus 391 g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 391 GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp TCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1234544 344899999999999998764
No 187
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.2e-21 Score=181.81 Aligned_cols=317 Identities=16% Similarity=0.082 Sum_probs=184.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-------CCh---hHHHHH-HHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceE
Q 017633 10 SYLQVLAALGETMKKGTSFGA-------PCL---LENVLA-EMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 78 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~-------~~~---~~~~l~-~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~v 78 (368)
.+|++++++.+++.+....++ ... ..++++ +++++.++-....++++||++|+..+++.+ ..++|.|
T Consensus 57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~--~~~Gd~V 134 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHAL--MSPGERL 134 (447)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH--CCTTCEE
T ss_pred CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHh--cCCCCEE
Confidence 489999999888764211111 112 224455 788888763333333889999999999876 3567899
Q ss_pred EEEcCCCCCCchhh--hhhcCCCccccCCCC--CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEE-cccCCCC
Q 017633 79 IKFEGCYHGHADPF--LVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVGNS 153 (368)
Q Consensus 79 i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~-~~~~~~~ 153 (368)
++..++|+++.... ....+.......++. ..+. .|++++++++++. +++++++ .|+++++
T Consensus 135 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------~d~~~l~~~i~~~--~~~~i~~~~~~~~~~ 199 (447)
T 3h7f_A 135 LGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHL-------------IDMDAVRATALEF--RPKVIIAGWSAYPRV 199 (447)
T ss_dssp EEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCS-------------CCHHHHHHHHHHH--CCSEEEEECSSCCSC
T ss_pred EecCcccccccchhhhhhhcCCeeEEEEcCcCcccCC-------------cCHHHHHHHHHhc--CCeEEEEcCCCCCCc
Confidence 99998887743211 112222111111110 1111 1899999999743 3456655 5555443
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
+ + +++|+++|++||++||+||+| .++ ..+..... ..+.+.-+.|+||+++ |+|.|++++++++++.+..
T Consensus 200 ~---~----l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~-~~~~di~~~s~sK~l~-G~~gG~i~~~~~~~~~l~~ 270 (447)
T 3h7f_A 200 L---D----FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP-VPHADVVSTTVHKTLG-GGRSGLIVGKQQYAKAINS 270 (447)
T ss_dssp C---C----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS-TTTCSEEEEESSGGGC-CCSCEEEEECGGGHHHHHH
T ss_pred c---C----HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC-CCCCcEEEecCCcCCC-CCCeEEEEECHHHHHHHhh
Confidence 2 4 999999999999999999997 655 44432111 1122222457899995 7899999998887776652
Q ss_pred CCCccccccCC-CCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHh-cCCceEE-eeccceEEEEeecC
Q 017633 232 AGPMYQAGTLS-GNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK-AGHAICG-GYISGMFGFFFTEG 305 (368)
Q Consensus 232 ~~~~~~~~t~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 305 (368)
. ....+.+ .+...++++.+++..+.+ +.+.+++.++++++++.|.+.... .++.... ...++++++++...
T Consensus 271 ~---~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (447)
T 3h7f_A 271 A---VFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDS 347 (447)
T ss_dssp H---HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTS
T ss_pred h---cCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCC
Confidence 1 1111222 233445555555554433 224566667777777776654111 1332111 12345666666421
Q ss_pred CCcccchhcccccHHHHHHHHHHHHcCeeec----CC--CCC----ccccc------cCCCHHHHHHHHHHHHHHHhh
Q 017633 306 PVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PS--QFE----AGFTS------LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~--~~~----~~~~~------~~~~~~~i~~~~~~l~~~l~~ 367 (368)
......+.+.|.++||.+. ++ ..+ .+|+. ..++++|++++++.|++++.+
T Consensus 348 ------------~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 348 ------------PLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ------------SCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ------------CCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 1123556666777799998 43 111 12321 237899999999999998853
No 188
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.89 E-value=9.9e-22 Score=179.77 Aligned_cols=217 Identities=14% Similarity=0.078 Sum_probs=153.7
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...++++.++++++.. +.++++||++|+..+++.+ ..+++.|++..+.|++..........
T Consensus 62 ~~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~~~~l~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~------------ 126 (398)
T 1gc0_A 62 ISNPTLNLLEARMASLEGGE-AGLALASGMGAITSTLWTL--LRPGDEVLLGNTLYGCTFAFLHHGIG------------ 126 (398)
T ss_dssp -CCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHH--CCTTCEEEEESSCCSHHHHHHHHTGG------------
T ss_pred CCChHHHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHH--hcCCCEEEEeCCCchhHHHHHHHHHH------------
Confidence 36788899999999998744 6677778999999999876 34678899999888875443321100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
..+.++..++..|++++++.++ ++++++++++.++++|.+.+ +++|+++|++||+++|+||+|..+..+
T Consensus 127 ----~~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~ 195 (398)
T 1gc0_A 127 ----EFGVKLRHVDMADLQALEAAMT---PATRVIYFESPANPNMHMAD----IAGVAKIARKHGATVVVDNTYCTPYLQ 195 (398)
T ss_dssp ----GGTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHGGGTCEEEEECTTTHHHHC
T ss_pred ----HcCCEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 1122334445558999999987 47899999988888898887 999999999999999999999754111
Q ss_pred cCccccccCCCcchhhhhhhcc-CCccc-eeeeehHHHHH-HhcCCCCcccc-ccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIG-GGLPV-GAYGGRRDIME-MVAPAGPMYQA-GTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~-~G~~i-G~v~~~~~~~~-~~~~~~~~~~~-~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.. ..++.+..+.|+||.++ +|.|+ |+++++++.++ .+.. .... .+.+.+++.++++.++++.+ +...+
T Consensus 196 ~~---~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~ 267 (398)
T 1gc0_A 196 RP---LELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ---GLKDMTGAVLSPHDAALLMRGIKTL--NLRMD 267 (398)
T ss_dssp CG---GGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT---HHHHHTCCCCCHHHHHHHHHHHTTH--HHHHH
T ss_pred Cc---hhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH---HhhccCCCCCCHHHHHHHHhccchH--HHHHH
Confidence 11 12455555668999999 57887 88888877655 4542 2222 33467888888877777543 23455
Q ss_pred HHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIID 280 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~ 280 (368)
+..++.+.+.+.|.+
T Consensus 268 ~~~~~~~~l~~~L~~ 282 (398)
T 1gc0_A 268 RHCANAQVLAEFLAR 282 (398)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 666677777766655
No 189
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=4.3e-22 Score=185.60 Aligned_cols=328 Identities=14% Similarity=0.015 Sum_probs=187.9
Q ss_pred cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCch
Q 017633 11 YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 90 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~ 90 (368)
++.+++++. .....+.+.+...+|+++++++++ .+++++++||++|++.+++.+ ..++| ++..++||+.+.
T Consensus 57 ~~~~~~a~~----~~~~~y~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~al~~l--~~~gd--i~~~~~~~~~~~ 127 (456)
T 2ez2_A 57 SDKQWAGMM----MGDEAYAGSENFYHLERTVQELFG-FKHIVPTHQGRGAENLLSQLA--IKPGQ--YVAGNMYFTTTR 127 (456)
T ss_dssp CHHHHHHHT----TCCCCSSSCHHHHHHHHHHHHHHC-CSEEEEESSHHHHHHHHHHHH--CCTTC--EEEESSCCHHHH
T ss_pred CHHHHHHhh----cchhhcccChhHHHHHHHHHHHhC-CCcEEEeCCcHHHHHHHHHHh--CCCCC--EeccccccchhH
Confidence 345555553 322233456778899999999985 358999999999999999776 34455 777888877655
Q ss_pred hhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC-CHHHHHHHHHcCC-CCeEEEEEcccCC-CCCcccCCHHHHHHHH
Q 017633 91 PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNK-GEIAAIILEPVVG-NSGFIAPKPDFLNAIR 167 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~l~~i~ 167 (368)
..+...|..+........... .......+. |+++|+++++... ..++++++++.++ ++|. ..+.+++++|+
T Consensus 128 ~~~~~~G~~~~~v~~~~~~~~-----~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~ 201 (456)
T 2ez2_A 128 YHQEKNGAVFVDIVRDEAHDA-----GLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVR 201 (456)
T ss_dssp HHHHHTTCEEEECBCGGGGCT-----TCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHH
T ss_pred HHHHHcCCEEEEecccccccc-----cccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHH
Confidence 555555554332221100000 000000011 8999999998531 2347777774444 6675 55666699999
Q ss_pred HHHHHhCCEEEEehhhhc----------h-hcccCcc--ccccCCCcchhhh--hhhccCCccceeeee-hHHHHHHhcC
Q 017633 168 RITKENGALLIFDEVMTG----------F-RLAYGGA--QEYFGVTPDLTTL--GKIIGGGLPVGAYGG-RRDIMEMVAP 231 (368)
Q Consensus 168 ~l~~~~~~~li~De~~~~----------~-~~g~~~~--~~~~~~~~di~s~--sK~~~~G~~iG~v~~-~~~~~~~~~~ 231 (368)
++|++||++||+||+|+. + +.+.... .+..+..+|++++ +|..++| ++||+++ ++++++.+..
T Consensus 202 ~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~ 280 (456)
T 2ez2_A 202 ELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKE 280 (456)
T ss_dssp HHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHH
Confidence 999999999999999964 3 2222110 0012233566544 4554445 6899988 6777766542
Q ss_pred CCCcccc-cc-CCCCHHHHHH-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeec--CC
Q 017633 232 AGPMYQA-GT-LSGNPLAMTA-GIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE--GP 306 (368)
Q Consensus 232 ~~~~~~~-~t-~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 306 (368)
......+ .+ .+.+...+.+ +.+.++.+. +++.++..++.+++++.|++ .++....+..+.++++.+.. ..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~~~~~~~~~~~~~~~~ 355 (456)
T 2ez2_A 281 LVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLKA----AGVPIVEPVGGHAVFLDARRFCEH 355 (456)
T ss_dssp HHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHH----TTCCBCSSCCSSEEEEEHHHHTTT
T ss_pred HHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhc----CCCccccCCCceEEEEEhHHhcCC
Confidence 1111010 11 1223333333 444444332 23555556666666666655 23322223345666766531 10
Q ss_pred CcccchhcccccHH-HHHHHHHH-HHcCeeecCCC-----------------CCccccccC---CCHHHHHHHHHHHHHH
Q 017633 307 VYNFEDAKKSETTK-FARFYRGM-LEEGVYFAPSQ-----------------FEAGFTSLA---HSSDDIQHTITAAEKV 364 (368)
Q Consensus 307 ~~~~~~~~~~~~~~-~~~~~~~l-~~~Gi~~~~~~-----------------~~~~~~~~~---~~~~~i~~~~~~l~~~ 364 (368)
.. .... ...+++.| .++||.+.+.+ ...+|+++. ++++++++++++|+++
T Consensus 356 ~~--------~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~ 427 (456)
T 2ez2_A 356 LT--------QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427 (456)
T ss_dssp SC--------GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CC--------hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 00 0111 34557777 57899864421 123455433 7999999999999998
Q ss_pred Hhh
Q 017633 365 LRQ 367 (368)
Q Consensus 365 l~~ 367 (368)
+.+
T Consensus 428 l~~ 430 (456)
T 2ez2_A 428 YQH 430 (456)
T ss_dssp HHT
T ss_pred Hhh
Confidence 754
No 190
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.89 E-value=8.7e-22 Score=181.48 Aligned_cols=311 Identities=12% Similarity=0.077 Sum_probs=176.9
Q ss_pred CcHHHHHHHHHHHHcCCC-------CCC----CChhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCce
Q 017633 10 SYLQVLAALGETMKKGTS-------FGA----PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 77 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~-------~~~----~~~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~ 77 (368)
.+|++++++.+++.+... ++. ........++++++.++ +.+.++ ++||++|+..+++.+ ..+++.
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~-~~sGs~a~~~a~~~~--~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQ-PHSGSQANFAVYTAL--LQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECC-CSSHHHHHHHHHHHH--CCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeE-ecCcHHHHHHHHHHh--cCCCCE
Confidence 689999999988854221 111 11223344467888776 444444 457899999998766 356788
Q ss_pred EEEEcCCCCCCchhhh--hhcCCCccccCCCC-CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 78 IIKFEGCYHGHADPFL--VKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 78 vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
|++..+.|++...... ...+.......++. ..+ ..|+++++++++++ +++++++++.++ |
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------~~d~~~l~~~i~~~--~~~~v~~~~~~~--~ 181 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESG-------------KIDYDEMAKLAKEH--KPKMIIGGFSAY--S 181 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEECTTC-------------SCCHHHHHHHHHHH--CCSEEEECCTTC--C
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCCccC-------------CcCHHHHHHHHHhc--CCeEEEEecCcc--C
Confidence 8888777655321111 11111111100100 011 12899999999853 466777754222 3
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchh--hhhhhccCCccceeeeehH---HHHH
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRR---DIME 227 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~~~---~~~~ 227 (368)
...+ +++|+++|++||++||+||+| .++ +.+..... .. .+|++ |+||+++ |.+.|++++++ ++.+
T Consensus 182 ~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~-~~di~~~s~sK~~~-g~~gg~~~~~~~~~~~~~ 253 (420)
T 3gbx_A 182 GVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP--VP-HAHVVTTTTHKTLA-GPRGGLILAKGGDEELYK 253 (420)
T ss_dssp SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS--TT-TSSEEEEESSGGGC-SCSCEEEEESSCCHHHHH
T ss_pred CccC----HHHHHHHHHHcCCEEEEECCcchhceecccCCcc--cc-cCCEEEeecccCCC-CCCceEEEEcCCcHHHHH
Confidence 3455 999999999999999999998 455 43332111 11 25665 5889997 55679998886 7776
Q ss_pred HhcCCCCccccccC-CCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eccceEEEEe
Q 017633 228 MVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGFFF 302 (368)
Q Consensus 228 ~~~~~~~~~~~~t~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~ 302 (368)
.+.. .....+. +.+...++++..++....+ +.+.+++.++++++++.|.+ .++..... ..+.++++.+
T Consensus 254 ~~~~---~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~ 326 (420)
T 3gbx_A 254 KLNS---AVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN----RGYKVVSGGTENHLFLLDL 326 (420)
T ss_dssp HHHH---HHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEEC
T ss_pred Hhhh---hcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh----cCCeeccCCCCCeEEEEEc
Confidence 6652 1111212 2334444444445443322 23455566666666666655 33321111 3455667765
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC------C----Ccccccc------CCCHHHHHHHHHHHHHHHh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------F----EAGFTSL------AHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~----~~~~~~~------~~~~~~i~~~~~~l~~~l~ 366 (368)
.. .......+.+.|.++||.+.+.+ . ..+|+.. .++++++++++++|++++.
T Consensus 327 ~~------------~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~ 394 (420)
T 3gbx_A 327 VD------------KNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLD 394 (420)
T ss_dssp GG------------GTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CC------------CCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHh
Confidence 32 11224677888888999998821 1 1134321 2568999999999999875
Q ss_pred h
Q 017633 367 Q 367 (368)
Q Consensus 367 ~ 367 (368)
+
T Consensus 395 ~ 395 (420)
T 3gbx_A 395 N 395 (420)
T ss_dssp T
T ss_pred C
Confidence 4
No 191
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.89 E-value=2.1e-22 Score=188.23 Aligned_cols=332 Identities=14% Similarity=0.007 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhc----C--C-ceEEEEcCC
Q 017633 12 LQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT----G--R-ERIIKFEGC 84 (368)
Q Consensus 12 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~----~--~-~~vi~~~~~ 84 (368)
|++++++.+++......+.+.....+|+++++++++ .+++++++||++|++.++++++... + + +.|++. .
T Consensus 53 ~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~-~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~--~ 129 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFG-YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS--N 129 (467)
T ss_dssp SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHC-CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE--S
T ss_pred HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhC-cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec--c
Confidence 788899988876543334455677899999999985 4789999999999999998876531 3 1 566654 4
Q ss_pred CCCCchh-hhhhcCCCccccCCCCCCCCCCCCCCcccccCC-CCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHH
Q 017633 85 YHGHADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
+|+.+.. .....+......... ..+.. . ....... .|+++|+++++++. +++++++++++++++|....+.+
T Consensus 130 ~h~~t~~~~~~~~~~~~~~~~~~--~~~~~--~-~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~ 204 (467)
T 2oqx_A 130 YFFDTTQGHSQINGCTVRNVYIK--EAFDT--G-VRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLA 204 (467)
T ss_dssp SCCHHHHHHHHHTTCEEEECBCT--TTTCT--T-SCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHH
T ss_pred cccccchhhhhccCcceeecccc--ccccC--C-CCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHH
Confidence 6654322 222222211100000 00000 0 0000001 18999999998531 36888888888777645666777
Q ss_pred HHHHHHHHHHHhCCEEEEehhhhc----------h-hcccCccccccC----CCcc--hhhhhhhccCCccc-eeeeehH
Q 017633 162 FLNAIRRITKENGALLIFDEVMTG----------F-RLAYGGAQEYFG----VTPD--LTTLGKIIGGGLPV-GAYGGRR 223 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De~~~~----------~-~~g~~~~~~~~~----~~~d--i~s~sK~~~~G~~i-G~v~~~~ 223 (368)
++++|+++|++||++||+|++|.. . ..|. ....+. ..+| +.++||+++. ++ |++++++
T Consensus 205 ~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d~~~~s~sK~~g~--~~Gg~~~~~~ 280 (467)
T 2oqx_A 205 NLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW--TIEQITRETYKYADMLAMSAKKDAMV--PMGGLLCMKD 280 (467)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS--CHHHHHHHHGGGCSEEEEESSSTTCC--SSCEEEEECS
T ss_pred HHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc--cHHHHhhhhhccCCeEEEecccccCC--CCceEEEecC
Confidence 799999999999999999966632 1 1111 111111 1123 4578899863 33 5666664
Q ss_pred H----HHHHhcCCCCcc-ccccCCC-CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccce
Q 017633 224 D----IMEMVAPAGPMY-QAGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 297 (368)
Q Consensus 224 ~----~~~~~~~~~~~~-~~~t~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 297 (368)
+ .+..+....... ...+++. +..++++....++...+++..++..++++++++.|++. +.... +..+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~-~~~~~~ 355 (467)
T 2oqx_A 281 DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI----GVVCQ-QAGGHA 355 (467)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT----TCCEE-EECSSC
T ss_pred hhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC----CCeee-cCCceE
Confidence 4 333332100000 0011122 22222222222232212234566677777888877764 33333 445667
Q ss_pred EEEEeec--CCCcccchhcccccHHHHHHHHHH-HHcCeeecCCCC-----------------Ccccccc--C-CCHHHH
Q 017633 298 FGFFFTE--GPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQF-----------------EAGFTSL--A-HSSDDI 354 (368)
Q Consensus 298 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~~-----------------~~~~~~~--~-~~~~~i 354 (368)
+++.+.. .... .......++++.| .++||.+.+++. ..+|+++ . ++++++
T Consensus 356 ~~~~~~~~~~~~~-------~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i 428 (467)
T 2oqx_A 356 AFVDAGKLLPHIP-------ADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHM 428 (467)
T ss_dssp EEEEHHHHSTTSC-------GGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHH
T ss_pred EEEechhhcccCC-------cccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHH
Confidence 7776531 0000 0110146778888 889999987431 3345544 4 899999
Q ss_pred HHHHHHHHHHHhh
Q 017633 355 QHTITAAEKVLRQ 367 (368)
Q Consensus 355 ~~~~~~l~~~l~~ 367 (368)
++++++|++++++
T Consensus 429 ~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 429 DFIIEAFKHVKEN 441 (467)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998854
No 192
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.89 E-value=2e-22 Score=183.75 Aligned_cols=287 Identities=15% Similarity=0.108 Sum_probs=185.0
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|++.++++.+.. .+++++||++|+..++.+ ..+++.|++..+.|++.........
T Consensus 64 ~~~p~~~~l~~~la~l~g~~-~~~~~~sG~~Ai~~~~~l---~~~gd~Vi~~~~~y~~~~~~~~~~~------------- 126 (400)
T 3nmy_A 64 THNPTRFAYERCVAALEGGT-RAFAFASGMAATSTVMEL---LDAGSHVVAMDDLYGGTFRLFERVR------------- 126 (400)
T ss_dssp TCCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHTT---SCTTCEEEEESSCCHHHHHHHHHTH-------------
T ss_pred CCCHHHHHHHHHHHHHhCCC-CEEEecCHHHHHHHHHHH---cCCCCEEEEeCCCchHHHHHHHHhh-------------
Confidence 45678899999999988643 677788899999985432 3567899999988886544332210
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++ ++++++++++++|++|.+.+ +++|+++|++||++||+||+|......
T Consensus 127 --~~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~G~~~~----l~~i~~la~~~g~~livDe~~~~~~~~ 197 (400)
T 3nmy_A 127 --RRTAGLDFSFVDLTDPAAFKAAIR---ADTKMVWIETPTNPMLKLVD----IAAIAVIARKHGLLTVVDNTFASPMLQ 197 (400)
T ss_dssp --HHHHCCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTHHHHC
T ss_pred --HhhcCeEEEEECCCCHHHHHHHhc---cCCCEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 000122345555668999999997 47899999999988998888 999999999999999999999632111
Q ss_pred cCccccccCCCcchhhhhhhccC-Ccccee--ee-ehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPVGA--YG-GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~iG~--v~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
....++.++.+.|+||.++| |.++|+ ++ .++++++.+.. .....+.+.+++.++.++..++.+ +...+
T Consensus 198 ---~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~---~~~~~g~~~~~~~a~~~l~~l~~l--~~r~~ 269 (400)
T 3nmy_A 198 ---RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF---LQNSIGGVQGPFDSFLALRGLKTL--PLRMR 269 (400)
T ss_dssp ---CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH---HHHHHCCBCCHHHHHHHHHHHTTH--HHHHH
T ss_pred ---ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHHhHhHH--HHHHH
Confidence 11224555566789999995 566655 33 46777777652 223345567888887777666544 22344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEE------------------eeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDAGKKAGHAICG------------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
+..++++.+.+.|++ .+....+ .+.|.++++++.. +......+.+.
T Consensus 270 ~~~~~a~~l~~~L~~----~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~------------~~~~~~~~~~~ 333 (400)
T 3nmy_A 270 AHCENALALAQWLET----HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKG------------GFDAAKRFCEK 333 (400)
T ss_dssp HHHHHHHHHHHHHTT----CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc----CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCC------------cHHHHHHHHHc
Confidence 555566655555543 3332222 4567888988732 11234556665
Q ss_pred HHHcCeeecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHh
Q 017633 328 MLEEGVYFAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 328 l~~~Gi~~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
|.--++.++.|+... ..+++....|+.+.+++.|+++++
T Consensus 334 l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 334 TELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp CSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 544344444443211 012334455677777888888764
No 193
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.88 E-value=5.4e-22 Score=177.07 Aligned_cols=275 Identities=12% Similarity=0.003 Sum_probs=178.4
Q ss_pred HHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh---hcCCCccccCCCCCCCCCC
Q 017633 37 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPK 113 (368)
Q Consensus 37 ~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 113 (368)
++++.++++++.. +.++++||++|+..+++.+ ..+++.|++..+.|++....... ..|.
T Consensus 2 ~l~~~la~~~g~~-~~i~~~sG~~a~~~~~~~~--~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~--------------- 63 (331)
T 1pff_A 2 ALEGKIAKLEHAE-ACAATASGMGAIAASVWTF--LKAGDHLISDDCLYGCTHALFEHQLRKFGV--------------- 63 (331)
T ss_dssp HHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHH--CCTTCEEEEESCCCHHHHHHHHTHHHHTTC---------------
T ss_pred hHHHHHHHHhCCC-eEEEeCChHHHHHHHHHHh--cCCCCEEEEcCCCcchHHHHHHHHHHhcCC---------------
Confidence 5777888887644 5566667899999999865 34678899999988875433321 1222
Q ss_pred CCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEehhhhchhcccCc
Q 017633 114 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVMTGFRLAYGG 192 (368)
Q Consensus 114 ~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~-~~~~li~De~~~~~~~g~~~ 192 (368)
++..++..|++++++.++ ++++++++++.++++|.+.+ +++|.++|++ ||+++|+||+|+......
T Consensus 64 ----~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~~~~~~-- 130 (331)
T 1pff_A 64 ----EVDFIDMAVPGNIEKHLK---PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASPILTN-- 130 (331)
T ss_dssp ----EEEEECTTSTTHHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHHHHCC--
T ss_pred ----EEEEeCCCCHHHHHHhhc---CCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCcccccCC--
Confidence 223333347889988886 46888888888888898887 9999999999 999999999996441111
Q ss_pred cccccCCCcchhhhhhhcc-CCcc-ceeeeehH-HHHHHhcCCCCcccc-ccCCCCHHHHHHHHHHHHHHccCCHHHHHH
Q 017633 193 AQEYFGVTPDLTTLGKIIG-GGLP-VGAYGGRR-DIMEMVAPAGPMYQA-GTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 268 (368)
Q Consensus 193 ~~~~~~~~~di~s~sK~~~-~G~~-iG~v~~~~-~~~~~~~~~~~~~~~-~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 268 (368)
.. .++.+..+.|+||+++ +|.| +|++++++ ++++.+.... .. .+.+.+++++.++..+++.+ +...+...
T Consensus 131 ~~-~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 204 (331)
T 1pff_A 131 PL-DLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGI---KDITGAIISPHDAWLITRGTLTL--DMRVKRAA 204 (331)
T ss_dssp GG-GGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCC---CCCCCCCCCHHHHHHHHHHHHHH--HHHHHHHH
T ss_pred hh-hcCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHH---HhhcCCCCCHHHHHHHHcCcchH--HHHHHHHH
Confidence 11 2444445568999999 5788 78999987 8888877422 22 34467888887776676644 22234455
Q ss_pred HHHHHHHHHHHHHHH----------hcCCce----EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCee
Q 017633 269 KITGELTQGIIDAGK----------KAGHAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 334 (368)
Q Consensus 269 ~~~~~l~~~l~~~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 334 (368)
.+.+.+.+.+++... ..+... ...+.++++.+.+. ...++.+.|.++||.
T Consensus 205 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~gI~ 268 (331)
T 1pff_A 205 ENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----------------GLEKAKKVLDNCHVV 268 (331)
T ss_dssp HHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----------------SHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----------------CHHHHHHHHHhCCCc
Confidence 555555555544210 000000 01124556666542 135677888889997
Q ss_pred ecCC---C---------------------------CCcccc--ccCCCHHHHHHHHHHHHHH
Q 017633 335 FAPS---Q---------------------------FEAGFT--SLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 335 ~~~~---~---------------------------~~~~~~--~~~~~~~~i~~~~~~l~~~ 364 (368)
+++. + ...+|+ ....++++++++++.|+++
T Consensus 269 ~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 269 SLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp EECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred eeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 6432 1 122333 4556788888888887754
No 194
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.88 E-value=9.2e-21 Score=174.10 Aligned_cols=186 Identities=13% Similarity=0.077 Sum_probs=128.8
Q ss_pred eccCCCcHHHHHHHHHHHHcCCCCC-CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcC
Q 017633 5 IILFPSYLQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 83 (368)
Q Consensus 5 ~~~g~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~ 83 (368)
..+++.+|+..+++.+ ......|+ ...+...+++++++++++. +++++++||++|+..+++.+ ..+++.|++..+
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~-~~~~~~~~gt~a~~~al~~l--~~~gd~vi~~~~ 103 (412)
T 2cb1_A 28 AAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGA-LEAVVLASGQAATFAALLAL--LRPGDEVVAAKG 103 (412)
T ss_dssp SBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHTT--CCTTCEEEEETT
T ss_pred ceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEeCC
Confidence 3567777665555443 12222222 2346789999999999863 48999999999999999765 356789999998
Q ss_pred CCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 84 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
.|++......... ...+.+++.++. |+++++++++ ++++++++++.++++|.+.+ +
T Consensus 104 ~~~~~~~~~~~~~----------------~~~g~~~~~~~~-~~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~----l 159 (412)
T 2cb1_A 104 LFGQTIGLFGQVL----------------SLMGVTVRYVDP-EPEAVREALS---AKTRAVFVETVANPALLVPD----L 159 (412)
T ss_dssp CCHHHHHHHHHTT----------------TTTTCEEEEECS-SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----H
T ss_pred CchhHHHHHHHHH----------------HHcCCEEEEECC-CHHHHHHHhc---cCCeEEEEeCCCCCCccccc----H
Confidence 8875433221100 011223444444 4899999887 47899999988888898887 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhcc-CCccceeeeeh
Q 017633 164 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIG-GGLPVGAYGGR 222 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~-~G~~iG~v~~~ 222 (368)
++|+++|++||+++|+||+|+.+. . ........+|+ .|+||.++ +|.|+|++++.
T Consensus 160 ~~i~~l~~~~~~~li~D~~~~~~~--~--~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~ 217 (412)
T 2cb1_A 160 EALATLAEEAGVALVVDNTFGAAG--A--LCRPLAWGAHVVVESLTKWASGHGSVLGGAVLS 217 (412)
T ss_dssp HHHHHHHHHHTCEEEEECGGGTTT--T--SCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred HHHHHHHHHcCCEEEEECCCcccc--c--cCCccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 999999999999999999997431 1 11112223454 46899998 57899998653
No 195
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.88 E-value=3.2e-21 Score=177.57 Aligned_cols=286 Identities=15% Similarity=0.111 Sum_probs=185.0
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
+++...+++++++++++.. ..++++||++|+..+++.+ ..+++.||+..+.|++.... +...
T Consensus 112 ~~~~~~~l~~~lA~l~g~~-~~v~~~sG~~Ai~~al~~l--~~~Gd~Vi~~~~~y~~~~~~-~~~~-------------- 173 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGAE-STLLMASGMCASTVMLLAL--VPAGGHIVTTTDCYRKTRIF-IETI-------------- 173 (445)
T ss_dssp CCHHHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHH--SCSSCEEEEETTSCHHHHHH-HHHT--------------
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHH-HHHH--------------
Confidence 4677889999999998754 5556667999999999755 24678999998888764322 1100
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEI-AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++. ++ +++++++.+|++|.+.+ +++|+++|++||++||+||+|+..
T Consensus 174 -~~~~G~~v~~v~~~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~--- 242 (445)
T 1qgn_A 174 -LPKMGITATVIDPADVGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATP--- 242 (445)
T ss_dssp -GGGGTCEEEEECSSCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCT---
T ss_pred -HHHcCCEEEEeCCCCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc---
Confidence 0112334555666689999999984 56 89999998888898888 999999999999999999999632
Q ss_pred cCccccccCCCcchh--hhhhhccC-C-ccceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 190 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 190 ~~~~~~~~~~~~di~--s~sK~~~~-G-~~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.. .......+|++ |++|.++| | .++|++++++++++.+... ........+++.++.+..+++.+ ....+
T Consensus 243 ~~--~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~---~~~~g~~~~~~~a~~~~~~l~~l--~~r~~ 315 (445)
T 1qgn_A 243 LN--QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL---HHILGGALNPNAAYLIIRGMKTL--HLRVQ 315 (445)
T ss_dssp TT--CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH---HHHHCCCCCHHHHHHHHHHGGGH--HHHHH
T ss_pred cc--CCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH---HHHhCCCCCHHHHHHHHHhHHHH--HHHHH
Confidence 11 11233445654 68999985 3 4799999998888777521 11122234666666665555533 22234
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceE--E----------------eeccceEEEEeecCCCcccchhcccccHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDAGKKAGHAIC--G----------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 327 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (368)
+..++++++++.|++. +.... . .+.++++++.+.. .......+.+.
T Consensus 316 ~~~~~a~~l~~~L~~~----p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~------------~~~~~~~~l~~ 379 (445)
T 1qgn_A 316 QQNSTALRMAEILEAH----PKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG------------DLLTTAKFVDA 379 (445)
T ss_dssp HHHHHHHHHHHHHHTC----TTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC----CCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECC------------CHHHHHHHHHh
Confidence 4555566666666553 21101 1 2357788887732 11234566666
Q ss_pred HHHcCeeecCCCCCc-------------------------cccccCCCHHHHHHHHHHHHHHHhhC
Q 017633 328 MLEEGVYFAPSQFEA-------------------------GFTSLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 328 l~~~Gi~~~~~~~~~-------------------------~~~~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
|...++.++.|+... ..+++....||++.+++.|+++++++
T Consensus 380 l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 380 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp CSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 654455555443210 11233444679999999999998753
No 196
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.87 E-value=5.8e-20 Score=172.86 Aligned_cols=329 Identities=15% Similarity=0.062 Sum_probs=186.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC-----ChhHHHHHHHHHhhCC-C-CCeEEEeCChHHHHHHHHHHHHHh----------
Q 017633 10 SYLQVLAALGETMKKGTSFGAP-----CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF---------- 72 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~~-~-~~~v~~~~~gt~a~~~al~~~~~~---------- 72 (368)
.++.+.+++.....+...+.+. .+.+.+++++++++++ + .+.+++++|||+|+..++..++..
T Consensus 112 ~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~ 191 (497)
T 2qma_A 112 LMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSI 191 (497)
T ss_dssp BHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred cHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccch
Confidence 4567777776655543222111 2455667777999987 3 379999999999999999876421
Q ss_pred --cC-----CceEEEEcCCCCCCchhhhhhcCCC---ccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---C
Q 017633 73 --TG-----RERIIKFEGCYHGHADPFLVKAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---G 139 (368)
Q Consensus 73 --~~-----~~~vi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~ 139 (368)
.+ ++.+++.+...|.+...+....+.+ +...+... .+.. |+++|++++++.. .
T Consensus 192 ~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~-~~~~-------------d~~~L~~~i~~~~~~~~ 257 (497)
T 2qma_A 192 QKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA-DGTM-------------DITKLDEVIAQAKAEGL 257 (497)
T ss_dssp HHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT-TSSB-------------CGGGHHHHHHHHHHTTC
T ss_pred hhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC-CCcC-------------CHHHHHHHHHHHHHCCC
Confidence 11 3424444445555555444444432 22111110 1111 7899999987421 1
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCcc
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLP 215 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~ 215 (368)
++.++++...++++|.+.+ +++|+++|++||+++++|++|.++ .... +.....++ .+|+++ ++|+++++++
T Consensus 258 ~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~ 332 (497)
T 2qma_A 258 IPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTIS 332 (497)
T ss_dssp EEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSS
T ss_pred cceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcc
Confidence 2446666655666787777 999999999999999999999876 3322 22112233 457654 5899997789
Q ss_pred ceeeeehH-HHHHHhcCCCCcccc-ccCCCCHHH----------HHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHH
Q 017633 216 VGAYGGRR-DIMEMVAPAGPMYQA-GTLSGNPLA----------MTAGIHTLKRLKEP---GTYEYLNKITGELTQGIID 280 (368)
Q Consensus 216 iG~v~~~~-~~~~~~~~~~~~~~~-~t~~~~~~~----------~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~ 280 (368)
+|++++++ ..++.+.....+... .+...+... .....++++.+..+ .+.++..++++++++.|++
T Consensus 333 ~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 412 (497)
T 2qma_A 333 CGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRT 412 (497)
T ss_dssp CEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998754 434444321111111 100111111 11233445544332 2344555555555555544
Q ss_pred HHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC----CCCcccc---ccCCCHHH
Q 017633 281 AGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----QFEAGFT---SLAHSSDD 353 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~~~~---~~~~~~~~ 353 (368)
. .++........+++++.+..... .......++.+.|.++|+.+.+. +...+|+ +..++++|
T Consensus 413 ~---~~~~~~~~~~~~~v~f~~~~~~~--------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~ed 481 (497)
T 2qma_A 413 N---DQFELLAEPSLSTVLFRATHETA--------DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSD 481 (497)
T ss_dssp C---TTEEECSCCSSSEEEEEECCSSS--------CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHH
T ss_pred C---CCeEEEcCCCceEEEEEEcCCcc--------CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHH
Confidence 2 12211112345566776642110 00112356788899999988753 2233454 45789999
Q ss_pred HHHHHHHHHHHHhhC
Q 017633 354 IQHTITAAEKVLRQI 368 (368)
Q Consensus 354 i~~~~~~l~~~l~~~ 368 (368)
++++++.|+++++++
T Consensus 482 i~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 482 FESLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 197
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=6.3e-21 Score=173.87 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=144.9
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++.+...++++.++++++.. +.++++||++|++.+++ . ..+++.|++..+.|++.... +..
T Consensus 52 ~~~~~~~~lr~~la~~~g~~-~~i~~~sGt~a~~~al~-~--~~~gd~Vi~~~~~y~~~~~~-~~~-------------- 112 (393)
T 1n8p_A 52 SQNPNRENLERAVAALENAQ-YGLAFSSGSATTATILQ-S--LPQGSHAVSIGDVYGGTHRY-FTK-------------- 112 (393)
T ss_dssp TCCHHHHHHHHHHHHHTTCS-EEEEESCHHHHHHHHHH-T--SCSSCEEEEESSCCHHHHHH-HHH--------------
T ss_pred CCChhHHHHHHHHHHHhCCC-cEEEECChHHHHHHHHH-H--cCCCCEEEEeCCCchHHHHH-HHH--------------
Confidence 35577889999999999744 56666789999999998 4 34678999998888764221 110
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh----CCEEEEehhhhc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN----GALLIFDEVMTG 185 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~----~~~li~De~~~~ 185 (368)
.....+.++..++.+| ++++++++ ++++++++++.+|++|.+.+ +++|+++|++| |+++|+||+|+.
T Consensus 113 -~~~~~G~~v~~v~~~d-~~l~~~i~---~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~ 183 (393)
T 1n8p_A 113 -VANAHGVETSFTNDLL-NDLPQLIK---ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLS 183 (393)
T ss_dssp -TSTTTCSCCEEESSHH-HHHHHHSC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTH
T ss_pred -HHHHcCcEEEEeCCCh-HHHHHhcc---cCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCccc
Confidence 0111233455566557 88888886 47899999998888999888 99999999999 999999999976
Q ss_pred h-hcccCccccccCCCcchhhhhhhcc-CCccc-eeeeeh-HHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccC
Q 017633 186 F-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPV-GAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 261 (368)
Q Consensus 186 ~-~~g~~~~~~~~~~~~di~s~sK~~~-~G~~i-G~v~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 261 (368)
+ .. . ...++.+..+.|+||.++ +|+|+ |+++++ +++++.+... ......+.++..+.++..+++.+ .
T Consensus 184 ~~~~-~---~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~---~~~~g~~~~~~~~~~~~~~l~~~--~ 254 (393)
T 1n8p_A 184 PYIS-N---PLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFL---QNAIGAIPSPFDAWLTHRGLKTL--H 254 (393)
T ss_dssp HHHC-C---GGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHH---HHHHCCCCCHHHHHHHHHHHTTH--H
T ss_pred cccC-C---HHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhccchH--H
Confidence 6 32 2 112343333448999999 47899 888884 7777776521 12122244666666665555433 1
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 017633 262 GTYEYLNKITGELTQGIID 280 (368)
Q Consensus 262 ~~~~~~~~~~~~l~~~l~~ 280 (368)
...++..++.+.+++.|.+
T Consensus 255 ~~~~~~~~~~~~l~~~L~~ 273 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAA 273 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 2234455555555555544
No 198
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.87 E-value=7.7e-21 Score=176.04 Aligned_cols=315 Identities=13% Similarity=0.052 Sum_probs=192.5
Q ss_pred eeccCCC--cHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHH------H-hcC
Q 017633 4 LIILFPS--YLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR------A-FTG 74 (368)
Q Consensus 4 ~~~~g~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~------~-~~~ 74 (368)
.++++.. ++++++++.+++... ++++.....++++.++++++.. ++++++||++|+..+++.+. . ..+
T Consensus 33 ~i~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~g~~-~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~ 109 (437)
T 3bb8_A 33 VVPPSGKVIGTKELQLMVEASLDG--WLTTGRFNDAFEKKLGEYLGVP-YVLTTTSGSSANLLALTALTSPKLGVRALKP 109 (437)
T ss_dssp CBCSCCCCCCHHHHHHHHHHHHHC--CCBSCHHHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHTTCGGGGGGSCCT
T ss_pred cccCCCCCCCHHHHHHHHHHHHcC--CcCCChHHHHHHHHHHHHHCCC-cEEEeCCHHHHHHHHHHHhhhcccccccCCC
Confidence 4566653 478999999888753 3345678899999999999643 68888899999999997652 0 345
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
++.|++..++|++...... ..|..+.........+.. |+++++++++ ++++++++.+. +|
T Consensus 110 gd~Vi~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~~~~---~g 169 (437)
T 3bb8_A 110 GDEVITVAAGFPTTVNPTI-QNGLIPVFVDVDIPTYNV-------------NASLIEAAVS---DKTKAIMIAHT---LG 169 (437)
T ss_dssp TCEEEECSSSCHHHHHHHH-HTTCEEEECCEETTTTEE-------------CGGGHHHHCC---TTEEEEEEECG---GG
T ss_pred cCEEEECCCCcHHHHHHHH-HcCCEEEEEeccCccCCc-------------CHHHHHHhcC---CCCeEEEEeCC---CC
Confidence 6889998888887654443 333322211111001111 7889999886 36777776432 33
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhh-chhcccCccccccCCCcch--hhhhhhcc-CCccceeeeehHHH-HHH-
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDL--TTLGKIIG-GGLPVGAYGGRRDI-MEM- 228 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~g~~~~~~~~~~~~di--~s~sK~~~-~G~~iG~v~~~~~~-~~~- 228 (368)
...+ +++|.++|++||+++|+||+|+ +... ....++..+|+ .||+|+++ +|.++|+++++++. .+.
T Consensus 170 ~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~----~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~ 241 (437)
T 3bb8_A 170 NLFD----LAEVRRVADKYNLWLIEDCCDALGSTY----DGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSII 241 (437)
T ss_dssp CCCC----HHHHHHHHHHHTCEEEEECTTCTTCEE----TTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHH
T ss_pred Chhc----HHHHHHHHHHcCCEEEEECccccCceE----CCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHH
Confidence 3345 9999999999999999999997 3311 11234433566 56655555 55688999887543 332
Q ss_pred --hcCCCCc-------------------------c--------ccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Q 017633 229 --VAPAGPM-------------------------Y--------QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 273 (368)
Q Consensus 229 --~~~~~~~-------------------------~--------~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 273 (368)
+...+.. + .+.++..+.+.+++++++++.+ +++.++.+++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~ 319 (437)
T 3bb8_A 242 ESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERI--EEFVEKRKANFKY 319 (437)
T ss_dssp HHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 2211100 0 1122234677887777777654 3344555666666
Q ss_pred HHHHHHHHHHhcCCceEEee-----c-c-ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCc----
Q 017633 274 LTQGIIDAGKKAGHAICGGY-----I-S-GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---- 342 (368)
Q Consensus 274 l~~~l~~~~~~~~~~~~~~~-----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~---- 342 (368)
+++.|+++. +.. ..+. . + ..+.+.+.. +.+.+..++.+.|.++||.++.+..+.
T Consensus 320 l~~~L~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~ 384 (437)
T 3bb8_A 320 LKDALQSCA---DFI-ELPEATENSDPSWFGFPITLKE-----------DSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQ 384 (437)
T ss_dssp HHHHGGGGT---TTE-ECCCCCTTEECCCSSEEEEECG-----------GGSSCHHHHHHHHHHTTBCCBCCTTSSGGGS
T ss_pred HHHHhhccC---Ccc-ccCCCCCCCceeeEEEEEEECC-----------cCcCcHHHHHHHHHHCCCceeccCCcccccC
Confidence 666655431 211 1110 0 1 111222211 011235789999999999998764310
Q ss_pred ------------------------ccc--ccCCCHHHHHHHHHHHHHHHh
Q 017633 343 ------------------------GFT--SLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 343 ------------------------~~~--~~~~~~~~i~~~~~~l~~~l~ 366 (368)
+++ ...++++|++++++.|++++.
T Consensus 385 p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 385 PYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp GGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred chhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 122 245699999999999998875
No 199
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.87 E-value=7.8e-22 Score=180.40 Aligned_cols=214 Identities=14% Similarity=0.125 Sum_probs=146.9
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...++++.++++++..+.+ +++||++|+..+++ + ..+++.|++..+.|++........
T Consensus 64 ~~~p~~~~l~~~la~~~g~~~~i-~~~sG~~ai~~~~~-l--~~~gd~Vl~~~~~y~~~~~~~~~~-------------- 125 (403)
T 3cog_A 64 SGNPTRNCLEKAVAALDGAKYCL-AFASGLAATVTITH-L--LKAGDQIICMDDVYGGTNRYFRQV-------------- 125 (403)
T ss_dssp --CHHHHHHHHHHHHHHTCSEEE-EESCHHHHHHHHHT-T--SCTTCEEEEESSCCHHHHHHHHHT--------------
T ss_pred CCCchHHHHHHHHHHHhCCCcEE-EECCHHHHHHHHHH-H--hCCCCEEEEeCCCcchHHHHHHHH--------------
Confidence 45677899999999999754444 45578999999887 4 356789999999888753322111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CEEEEehhhhchhc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRL 188 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~-~~li~De~~~~~~~ 188 (368)
....+.++..++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++|| +++|+||+|..+..
T Consensus 126 --~~~~G~~v~~v~~~d~~~l~~~i~---~~t~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~~livD~~~~~~~~ 196 (403)
T 3cog_A 126 --ASEFGLKISFVDCSKIKLLEAAIT---PETKLVWIETPTNPTQKVID----IEGCAHIVHKHGDIILVVDNTFMSPYF 196 (403)
T ss_dssp --GGGGTCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTSSSCCEEEEECTTTCTTT
T ss_pred --HHHcCCEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeeeC----HHHHHHHHHHcCCCEEEEECCCccccc
Confidence 011223455566668999999987 47899999888888898888 999999999999 99999999975411
Q ss_pred ccCccccccCCCcch--hhhhhhccC-C-ccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCH
Q 017633 189 AYGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 263 (368)
Q Consensus 189 g~~~~~~~~~~~~di--~s~sK~~~~-G-~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~ 263 (368)
... ++..+|+ .|+||.+++ | .++|++++ ++++++.+.. .....+...+++.+.++..+++.+ +..
T Consensus 197 ~~~-----~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~---~~~~~g~~~~~~~~~~~~~~l~~l--~~r 266 (403)
T 3cog_A 197 QRP-----LALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRF---LQNSLGAVPSPIDCYLCNRGLKTL--HVR 266 (403)
T ss_dssp CCT-----TTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHTTH--HHH
T ss_pred CCc-----cccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhhHH--HHH
Confidence 111 1233455 489999994 4 58999988 4777777652 222233456788888777766533 223
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017633 264 YEYLNKITGELTQGIID 280 (368)
Q Consensus 264 ~~~~~~~~~~l~~~l~~ 280 (368)
.++..++.+.+.+.+++
T Consensus 267 ~~~~~~n~~~l~~~l~~ 283 (403)
T 3cog_A 267 MEKHFKNGMAVAQFLES 283 (403)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 44455555555555544
No 200
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.86 E-value=1.2e-20 Score=172.10 Aligned_cols=303 Identities=14% Similarity=0.071 Sum_probs=188.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHH-----HhcCCceEEEEcCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR-----AFTGRERIIKFEGC 84 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~-----~~~~~~~vi~~~~~ 84 (368)
-+|++++++.+++... ++++.+...++++.++++++.. .+++++||++|+..+++.++ ...+++.|++..++
T Consensus 13 ~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~~~-~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~ 89 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDSK--MFTMGEYVKQYETQFAKTFGSK-YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVS 89 (390)
T ss_dssp CCHHHHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSS
T ss_pred CCHHHHHHHHHHHHcC--CCCCChHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCC
Confidence 5678999999988763 3345778899999999998643 67888899999999997652 13457889999999
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|++...... ..|..+.........+.. |++++++.++ ++++++++.+ ++|...+ ++
T Consensus 90 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~~~---~~g~~~~----~~ 145 (390)
T 3b8x_A 90 WSTTYYPLQ-QYGLRVKFVDIDINTLNI-------------DIESLKEAVT---DSTKAILTVN---LLGNPNN----FD 145 (390)
T ss_dssp CHHHHHHHH-HTTCEEEEECBCTTTCSB-------------CHHHHHHHCC---TTEEEEEEEC---GGGCCCC----HH
T ss_pred cHHHHHHHH-HcCCEEEEEecCccccCc-------------CHHHHHHHhC---cCCeEEEEEC---CccChhh----HH
Confidence 887655433 333332221111111111 8999999987 3677777653 2344455 99
Q ss_pred HHHHHHHHhCCEEEEehhhh-chhcccCccccccCCCcchhhhhhhcc----CCccceeeeehH-HHHHHh---cCCC--
Q 017633 165 AIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLGKIIG----GGLPVGAYGGRR-DIMEMV---APAG-- 233 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~-~~~~g~~~~~~~~~~~~di~s~sK~~~----~G~~iG~v~~~~-~~~~~~---~~~~-- 233 (368)
+|.++|++||+++|+||+|+ +.. .....++..+|+.++||..+ +| +.|++++++ ++.+.+ ...+
T Consensus 146 ~i~~l~~~~~~~li~D~a~~~g~~----~~~~~~g~~~~~~~~s~~~~k~~~~g-~gG~~~~~~~~l~~~~~~~~~~g~~ 220 (390)
T 3b8x_A 146 EINKIIGGRDIILLEDNCESMGAT----FNNKCAGTFGLMGTFSSFYSNHIATM-EGGCIVTDDEEIYHILLCIRAHGWT 220 (390)
T ss_dssp HHHHHHTTSCCEEEEECTTCTTCE----ETTEETTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTBS
T ss_pred HHHHHHHHcCCEEEEECcCcccCE----ECCcccccccceEEEEccCCCCCccC-CceEEEeCCHHHHHHHHHHHhcCCC
Confidence 99999999999999999997 321 12234566677777775443 33 348887764 554433 2211
Q ss_pred -C-------------------c---cccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017633 234 -P-------------------M---YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 290 (368)
Q Consensus 234 -~-------------------~---~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 290 (368)
. + ..+.++..+++.++++++.++.++ ++.++.+++++++++.|++ .+....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~----~~~~~~ 294 (390)
T 3b8x_A 221 RNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP--RFISVRRKNAEYFLDKFKD----HPYLDV 294 (390)
T ss_dssp TTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTT----CSSEEE
T ss_pred ccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcC----CCCccc
Confidence 0 0 012233477888888877776552 3455556666666665544 221111
Q ss_pred Ee--eccce--EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC------C-Cc-----------------
Q 017633 291 GG--YISGM--FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------F-EA----------------- 342 (368)
Q Consensus 291 ~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~-~~----------------- 342 (368)
.. ....+ +++.+... ...+..++.+.|.++||.+++.. . +.
T Consensus 295 ~~~~~~~~~~~~~i~~~~~-----------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (390)
T 3b8x_A 295 QQETGESSWFGFSFIIKKD-----------SGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEY 363 (390)
T ss_dssp CCCCSBCCCCEEEEEECTT-----------SCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHH
T ss_pred CCCCCCcccEEEEEEecCc-----------CcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHH
Confidence 11 11222 33333210 01234788999999999998731 1 10
Q ss_pred -----ccc--ccCCCHHHHHHHHHHH
Q 017633 343 -----GFT--SLAHSSDDIQHTITAA 361 (368)
Q Consensus 343 -----~~~--~~~~~~~~i~~~~~~l 361 (368)
+++ ...++++|++++++.|
T Consensus 364 ~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 364 LDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 122 3567999999999876
No 201
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.86 E-value=6.5e-20 Score=168.90 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=128.7
Q ss_pred CcHHHHHHHHHHHHcCCC--CC---CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCC
Q 017633 10 SYLQVLAALGETMKKGTS--FG---APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 84 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~--~~---~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~ 84 (368)
-+|++++++.+++..... ++ ...+...++++.++++++-. ++++++||++|+..+++.+. ..+++.|++..++
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~-~~i~~~~gt~al~~~~~~~~-~~~gd~Vl~~~~~ 91 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP-YCVPTTSGSTALMLALEALG-IGEGDEVIVPSLT 91 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSS
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHcC-CCCcCEEEECCCc
Confidence 368999999998876421 21 11244889999999988633 57778889999999997652 2457889999998
Q ss_pred CCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 017633 85 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 164 (368)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 164 (368)
|++...... ..|..+............ |++++++.++ ++++++++++ ++|...+ ++
T Consensus 92 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~-------------d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~ 147 (418)
T 2c81_A 92 WIATATAVL-NVNALPVFVDVEADTYCI-------------DPQLIKSAIT---DKTKAIIPVH---LFGSMAN----MD 147 (418)
T ss_dssp CTHHHHHHH-HTTCEEEEECBCTTTCSB-------------CHHHHGGGCC---TTEEEECCBC---CTTCCCC----HH
T ss_pred cHhHHHHHH-HcCCEEEEEecCCCCCCc-------------CHHHHHHhhC---CCCeEEEEeC---CcCCccc----HH
Confidence 887654433 333333221111101111 7999998886 3677777643 4566665 99
Q ss_pred HHHHHHHHhCCEEEEehhhhch-h-cccCccccccCCCcchhhh--hhhccCCccceeeeeh-HHHHHHhc
Q 017633 165 AIRRITKENGALLIFDEVMTGF-R-LAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGR-RDIMEMVA 230 (368)
Q Consensus 165 ~i~~l~~~~~~~li~De~~~~~-~-~g~~~~~~~~~~~~di~s~--sK~~~~G~~iG~v~~~-~~~~~~~~ 230 (368)
+|.++|++||++||+||+|+.+ . .+.. ...++ ..++.|| ||.+++| ++||++++ +++++.+.
T Consensus 148 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~-~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~ 214 (418)
T 2c81_A 148 EINEIAQEHNLFVIEDCAQSHGSVWNNQR--AGTIG-DIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQ 214 (418)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEE--TTSSS-SEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECcccccCccCCEe--ccccc-ceEEEeccCCcccCCC-CeEEEEECCHHHHHHHH
Confidence 9999999999999999999754 2 1111 11111 2455677 8999987 99999884 67665543
No 202
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=9.5e-22 Score=182.15 Aligned_cols=287 Identities=10% Similarity=-0.006 Sum_probs=173.9
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
+.....++++++++ ++..+.+++++|+++|+..+++.+ ..+++.|++..++|+..... +...|.............
T Consensus 55 ~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~--~~~gd~Vlv~~~~h~s~~~~-~~~~G~~~~~v~~~~~~~ 130 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSF--SQKKGDILMARNVHKSVLHA-LDISQQEGHFIETHQSPL 130 (446)
T ss_dssp CSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTT--TTSSSCEEECTTCCHHHHHH-HHHHTCCEEECEEEECTT
T ss_pred cchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHh--cCCCCEEEEecCccHHHHHH-HHHcCCeEEEEeCeeccc
Confidence 45677899999999 874478999999999999999876 34678898888777665443 344444332211100100
Q ss_pred CCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch--hc
Q 017633 111 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RL 188 (368)
Q Consensus 111 ~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~--~~ 188 (368)
. + -...+ |++++ +. ++++++++.+ .+++|.+.+ +++|+++|++||+++|+||+|.+. ..
T Consensus 131 ~----~-~~~~~---d~~~l---~~---~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~ 191 (446)
T 2x3l_A 131 T----N-HYNKV---NLSRL---NN---DGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQ 191 (446)
T ss_dssp T----S-SEEEE---EC-------------CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTST
T ss_pred c----C-cCCCC---CHHHH---cC---CCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccC
Confidence 0 0 00011 45555 22 3566666666 444788887 999999999999999999999752 22
Q ss_pred ccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHH--HhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC--
Q 017633 189 AYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIME--MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-- 262 (368)
Q Consensus 189 g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~--~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~-- 262 (368)
+.......++ +|+ .|++|.++++.++|++++++++++ .+.. ......+.+.+...++++.++++.+...+
T Consensus 192 ~~~~~~~~~g--~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~--~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~ 267 (446)
T 2x3l_A 192 GFPDSTLNYQ--ADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIE--YLSYFQTSSPSYLIMASLESAAQFYKTYDST 267 (446)
T ss_dssp TSCCCGGGGT--CSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHH--HHHHHSCSSCCHHHHHHHHHHHHHHHHCCCH
T ss_pred CCCCChHHcC--CCEEEECCccccccccccEEEEEcCCcCCHHHHHH--HHHHHcCCCchHHHHHHHHHHHHHHHHhCHH
Confidence 2222222233 455 467799887778999988776543 2221 01122344567777767667777765432
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC
Q 017633 263 -TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE 341 (368)
Q Consensus 263 -~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~ 341 (368)
+.++..++.++++++ ++..........+++.+. .....++++.|.++||.+...+..
T Consensus 268 ~~~~~~~~l~~~l~~~--------g~~~~~~~~~~~l~i~~~--------------~~~~~~l~~~L~~~GI~v~~~g~~ 325 (446)
T 2x3l_A 268 LFFAKRAQLIECLENK--------GFEMLQVDDPLKLLIKYE--------------GFTGHDIQNWFMNAHIYLELADDY 325 (446)
T ss_dssp HHHHHHHHHHHHHHHH--------TCEEEECSSTTEEEEECT--------------TSCHHHHHHHHHHTTEEESEECSS
T ss_pred HHHHHHHHHHHHHHHc--------CCEECcCCCCeEEEEEeC--------------CcCHHHHHHHHHHCCCEEEecCCC
Confidence 444454444444444 222111112234555542 112467899999999999833334
Q ss_pred cccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 342 AGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 342 ~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+++ +...+++++ +++++|++++++
T Consensus 326 ~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 326 QALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp CEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred EEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 5554 444688999 999999998754
No 203
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.86 E-value=1.8e-21 Score=177.59 Aligned_cols=272 Identities=10% Similarity=0.028 Sum_probs=167.2
Q ss_pred HHHHHHHHhhCC------CC-CeEEEeCChHHHHHHHHHHHHHhcCCc----eEEEEcCCCCCCchhhhhhcCCCccccC
Q 017633 36 NVLAEMVISAVP------SI-EMVRFVNSGTEACMGVLRLARAFTGRE----RIIKFEGCYHGHADPFLVKAGSGVATLG 104 (368)
Q Consensus 36 ~~l~~~l~~~~~------~~-~~v~~~~~gt~a~~~al~~~~~~~~~~----~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (368)
.+|++.++++++ .. +++++|+|+++++..+++.+. .++| .|++..++|...... ....|..+.
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~--~~Gd~~~~~Vlv~~P~y~~~~~~-~~~~g~~~~--- 144 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALS--SLARSQPVSVVAAAPFYSTYVEE-TTYVRSGMY--- 144 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHH--HTSSSSSEEEEECSSCCTHHHHH-HHTTCBTTE---
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhc--CCCCCCcceEEEcCCCchhHHHH-HHHcCCeEE---
Confidence 788888888764 24 699999999999999997763 3567 899988888764333 233333221
Q ss_pred CCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CEEEEehh
Q 017633 105 LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG--ALLIFDEV 182 (368)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~--~~li~De~ 182 (368)
.++. |.++++ . ++++++++...+|++|.+.+ +|++ ++|+ +++|+||+
T Consensus 145 ----------------~~~~-d~~~l~---~---~~~k~v~l~~p~NPtG~~~~------~l~~--~~~~~~~~ii~De~ 193 (391)
T 3bwn_A 145 ----------------KWEG-DAWGFD---K---KGPYIELVTSPNNPDGTIRE------TVVN--RPDDDEAKVIHDFA 193 (391)
T ss_dssp ----------------EEEE-ESTTCC---C---CSCEEEEEESSCTTTCCCCC------CCC-------CCCEEEEECT
T ss_pred ----------------EecC-CHHHcC---C---CCCEEEEECCCCCCCchhHH------HHHH--HhhcCCCEEEEeCC
Confidence 1111 112222 1 35666655444555666664 2333 2255 99999999
Q ss_pred hhchhcccCcccc-ccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHc
Q 017633 183 MTGFRLAYGGAQE-YFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 259 (368)
Q Consensus 183 ~~~~~~g~~~~~~-~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~ 259 (368)
|.+ +...... ..+....+.||||.++ +|+|+||+++ ++++++.+.. .....+++.+.+++.++.++++...
T Consensus 194 y~~---~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~ 267 (391)
T 3bwn_A 194 YYW---PHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVE---YIIVNSIGVSKESQVRTAKILNVLK 267 (391)
T ss_dssp TCS---TTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHH---HHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CCC---CCCCccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHH---HhcccccCCCHHHHHHHHHHHhCcc
Confidence 962 1111111 2334445679999998 8999999987 8888887763 2233356789999999888887542
Q ss_pred --------cCCHHHHHHHHHHHHHHHHHHHHHhcCCceE--------------EeeccceEEEEeecCCCcccchhcccc
Q 017633 260 --------EPGTYEYLNKITGELTQGIIDAGKKAGHAIC--------------GGYISGMFGFFFTEGPVYNFEDAKKSE 317 (368)
Q Consensus 260 --------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+.+.++.++..+..++.+.+.+.+.+.... .+..|.++|+.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~------------- 334 (391)
T 3bwn_A 268 ETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE------------- 334 (391)
T ss_dssp HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS-------------
T ss_pred hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc-------------
Confidence 1344444444444444444444444321100 11233466776631
Q ss_pred cHHHHHHHHHHHHcCeeecCCCC-----CccccccCCCHHHHHHHHHHHHHHHh
Q 017633 318 TTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 318 ~~~~~~~~~~l~~~Gi~~~~~~~-----~~~~~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
...+...|.++||.+.++.. ..+|+++..+++++++++++|+++++
T Consensus 335 ---~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 335 ---ETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMKL 385 (391)
T ss_dssp ---SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHHHHHSCC-
T ss_pred ---HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 13456677789999998742 34677777899999999999988764
No 204
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.86 E-value=3.4e-20 Score=168.04 Aligned_cols=315 Identities=11% Similarity=0.048 Sum_probs=190.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCChhHHHHHHHH-HhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCC
Q 017633 10 SYLQVLAALGETMKKGTSFGAPCLLENVLAEMV-ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 88 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 88 (368)
.+|++++++.+.+.... ++...+...++++.+ +++++..+++++++||++|+..++..+ ...++|.||+...+|...
T Consensus 14 ~~~~i~~a~~~~~~~~~-~~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l-~~~~Gd~Vi~~~~~~~~~ 91 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHI-YTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLK-KRKKGKYALMPSFTFPAT 91 (377)
T ss_dssp CGGGGHHHHHHHHHHTC-CSSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHH-SCTTCCEEEEESSSCTHH
T ss_pred CcHHHHHHHHHHHHcCC-cccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHH
Confidence 45678999999887743 221246678999999 999873567888999999999999765 235678999998888765
Q ss_pred chhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 017633 89 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~ 168 (368)
... ....|..+.........+.. |++++++++....+++++++. + +++|...+ +++|.+
T Consensus 92 ~~~-~~~~G~~~~~v~~~~~~~~~-------------d~~~l~~~i~~~~~~tk~v~~--~-~~~G~~~~----~~~i~~ 150 (377)
T 3ju7_A 92 PLA-AIWCGLEPYFIDISIDDWYM-------------DKTVLWDKIEELKEEVAIVVP--Y-ATFGSWMN----LEEYEE 150 (377)
T ss_dssp HHH-HHHTTCEEEEECBCTTTCSB-------------CHHHHHHHHHHHGGGEEEECC--B-CGGGBCCC----CHHHHH
T ss_pred HHH-HHHcCCEEEEEecCCccCCc-------------CHHHHHHHHhcCCCCceEEEE--E-CCCCCccC----HHHHHH
Confidence 433 33334433222111111111 899999988321012777763 3 33566666 899999
Q ss_pred HHHHhCCEEEEehhhhchhcccCcccccc-CC--Ccchhhh--hhhccCCccceeeee-hHHHHHHhcC---CCC-----
Q 017633 169 ITKENGALLIFDEVMTGFRLAYGGAQEYF-GV--TPDLTTL--GKIIGGGLPVGAYGG-RRDIMEMVAP---AGP----- 234 (368)
Q Consensus 169 l~~~~~~~li~De~~~~~~~g~~~~~~~~-~~--~~di~s~--sK~~~~G~~iG~v~~-~~~~~~~~~~---~~~----- 234 (368)
+|+ ||++||+|++|+. |..+..... +. ..++.|| +|.+++| ..|+++. ++++.+.++. .+.
T Consensus 151 la~-~~~~vi~D~a~a~---g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~ 225 (377)
T 3ju7_A 151 LEK-KGVPVVVDAAPGF---GLMNGGMHYGQDFSGMIIYSFHATKPFGIG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRE 225 (377)
T ss_dssp HHH-TTCCBEEECTTCT---TCEETTEETTTTCSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHTBTTBCTTSC
T ss_pred HHh-cCCEEEEECCCcc---CCeECCEeccCCCCcEEEEECCCCCcCCCC-CcEEEEECCHHHHHHHHHHHhcCCCCCCc
Confidence 999 9999999999962 111111122 11 2234454 3999865 5677765 5666555432 111
Q ss_pred -ccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHh-cCCceEEee-cc-ceEEEEeecCCCccc
Q 017633 235 -MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGY-IS-GMFGFFFTEGPVYNF 310 (368)
Q Consensus 235 -~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 310 (368)
...+..+..+.+.++.++..++.+ +.+.++.+++.+++.+.|.+...- ......... .. .++.+.+.
T Consensus 226 ~~~~g~~~~~~~~~aa~~~~~l~~l--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 296 (377)
T 3ju7_A 226 CTMMGFNCKMSEYAAAIGIATMKKW--DDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCP------- 296 (377)
T ss_dssp BCSSCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECC-------
T ss_pred eeeccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeC-------
Confidence 011334567788888777777644 345667777777777777664210 111111000 11 12222221
Q ss_pred chhcccccHHHHHHHHHHHHcCeeecCCCC-Cc------------------------ccc--ccCCCHHHHHHHHHHHHH
Q 017633 311 EDAKKSETTKFARFYRGMLEEGVYFAPSQF-EA------------------------GFT--SLAHSSDDIQHTITAAEK 363 (368)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-~~------------------------~~~--~~~~~~~~i~~~~~~l~~ 363 (368)
+..+..++.+.|.++||.++.... +. +++ ...++++|++++++.|++
T Consensus 297 ------~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 297 ------EEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp ------TTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred ------ChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 111257899999999999987642 11 022 246699999999999988
Q ss_pred HHhh
Q 017633 364 VLRQ 367 (368)
Q Consensus 364 ~l~~ 367 (368)
++.+
T Consensus 371 ~~~~ 374 (377)
T 3ju7_A 371 KVVS 374 (377)
T ss_dssp ----
T ss_pred HHhc
Confidence 7753
No 205
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=1.3e-20 Score=170.23 Aligned_cols=310 Identities=12% Similarity=0.003 Sum_probs=185.8
Q ss_pred CcHHHHHHHHHHHHcC---------CCCCCC--ChhHHHHHHHHHhhCC-CCC-e-EEEeCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKG---------TSFGAP--CLLENVLAEMVISAVP-SIE-M-VRFVNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~---------~~~~~~--~~~~~~l~~~l~~~~~-~~~-~-v~~~~~gt~a~~~al~~~~~~~~~ 75 (368)
.+|++++++.+++.+. ..+.++ .+..++++++++++++ +.+ + +++|+||++++..++..+ ..++
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l--~~~g 92 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNF--LKEG 92 (362)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHH--CCTT
T ss_pred CCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhc--CCCC
Confidence 6789999999887542 111222 2356789999999987 432 5 578899999999999766 3467
Q ss_pred ceEEEEcCCCCCCch-hhhhhcCCCccccCCCC--CCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 76 ERIIKFEGCYHGHAD-PFLVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
|+|++...++++... ......| .+....... ..+.. .|.++++ ++ ++++++++.+++++
T Consensus 93 d~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~------------~~~~~~~--i~---~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 93 QTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTL------------PKLQEIQ--LQ---DNAAYLHLTSNETI 154 (362)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSC------------CCGGGCC--CC---TTEEEEEEESEETT
T ss_pred CeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccC------------CCHHHcc--cC---CCcCEEEEeCCcCc
Confidence 888887665555321 2233334 433222210 01110 0344332 33 46887777777777
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHHHhcC
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~~~~~ 231 (368)
+|....+ +++| ||+++|+||+|+... ....... .+.-+.++||+++ .| +||+++++++++.+..
T Consensus 155 tG~~~~~---l~~i------~~~~vivD~a~~~~~--~~~~~~~--~d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~ 219 (362)
T 2c0r_A 155 EGAQFKA---FPDT------GSVPLIGDMSSDILS--RPFDLNQ--FGLVYAGAQKNLGPSG--VTVVIVREDLVAESPK 219 (362)
T ss_dssp TTEECSS---CCCC------TTSCEEEECTTTTTS--SCCCGGG--CSEEEEETTTTTCCSS--CEEEEEEGGGSSSCCT
T ss_pred cceeccc---cccc------CCCEEEEEChhhccC--CccchhH--CcEEEEeccccccCcC--cEEEEEcHHHHhhccc
Confidence 7875332 5565 899999999996321 1111222 2222457899997 34 8999999887766653
Q ss_pred CCCccc---------cccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-C-ceEE---eeccce
Q 017633 232 AGPMYQ---------AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-H-AICG---GYISGM 297 (368)
Q Consensus 232 ~~~~~~---------~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~-~~~~---~~~~~~ 297 (368)
..+... ...++.+..++.++.++++.+.+.+..+.+.++.+.+++.+.+.+.+.+ + .... .....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 299 (362)
T 2c0r_A 220 HLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMN 299 (362)
T ss_dssp TSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSE
T ss_pred cCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcE
Confidence 211111 2234677888888888988765432233444444444444444444444 2 2110 112344
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccccc--CCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFTSL--AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~~~--~~~~~~i~~~~~~l~~~l~~ 367 (368)
+++.+ ++..+..++++.|.++||.+.++.. ..+|+++ ..+++|++++++.|++++++
T Consensus 300 ~~~~~-------------~~~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 300 ITFRL-------------ASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp EEEEC-------------SCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEc-------------CCcchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 55544 1234567899999999998887632 2355544 35899999999999998764
No 206
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.85 E-value=3.6e-20 Score=172.27 Aligned_cols=292 Identities=13% Similarity=0.065 Sum_probs=171.2
Q ss_pred hHHHHHHHHHhhCC-CCCeEEEeCChH-HHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCC--CCC
Q 017633 34 LENVLAEMVISAVP-SIEMVRFVNSGT-EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP--DSP 109 (368)
Q Consensus 34 ~~~~l~~~l~~~~~-~~~~v~~~~~gt-~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 109 (368)
...+++++++++++ +.+ +++++||| .++..++..++...+++.||+... .|......+...|.++...... ...
T Consensus 134 ~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~-~h~s~~~~~~~~G~~~~~v~~~~~~~~ 211 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYA-SHKSPIKAVSFVGMNMRLVETVLDGDR 211 (456)
T ss_dssp HHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred HHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECC-CcHHHHHHHHHcCCCceEEEEeccCCC
Confidence 45678899999987 444 99999999 566656655443335556666666 5554555555445443221110 011
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHH-HcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchh
Q 017633 110 GVPKGATYETLTAPFNDVSALENLF-ENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 187 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~-~~~-~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~ 187 (368)
+. .|+++|++++ +.. ..++.++++...++++|.+.+ +++|+++|++||+++++||+|.++.
T Consensus 212 ~~-------------~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~~g~~v~vD~A~~~~~ 274 (456)
T 2z67_A 212 VY-------------VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQN 274 (456)
T ss_dssp EE-------------CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTC
T ss_pred CC-------------cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCcEEEECcchHHH
Confidence 11 1899999999 420 125666655555566788877 9999999999999999999996541
Q ss_pred ccc-CccccccCCCcchh--hhhhhccCCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---
Q 017633 188 LAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--- 260 (368)
Q Consensus 188 ~g~-~~~~~~~~~~~di~--s~sK~~~~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~--- 260 (368)
.|. ......+...+|++ +++|.+++++++|++++ ++++++.+.. .+.+.. +.++ ..++.+++..+..
T Consensus 275 ~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~---~~~g~~-~~~~--~~~~~aal~~l~~~~~ 348 (456)
T 2z67_A 275 NYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISL---SYPGRA-SATP--VVNTLVSLLSMGSKNY 348 (456)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHT---TSCSCB-CSHH--HHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCc---CCCCCC-CCCH--HHHHHHHHHHHHHHHH
Confidence 111 11111121134554 56898888899999988 5777776642 122221 1121 2233334443322
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCe---eec-
Q 017633 261 PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV---YFA- 336 (368)
Q Consensus 261 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~~~- 336 (368)
++..++..++++++++.|++.....+... .... +++++.+... .. ..++.+.|.++|+ .+.
T Consensus 349 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~v-~~~~-~~v~~~~~~~-----------~~--~~~l~~~L~~~gi~~~rv~~ 413 (456)
T 2z67_A 349 LELVKNQKNSKKLLDELLNDLSKKTGGKF-LDVE-SPIASCISVN-----------SD--PVEIAAKLYNLRVTGPRGIK 413 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCB-CCCC-CSSEEEEECS-----------SC--HHHHHHHHHHTTEESCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCEe-cCCC-CeEEEEEecc-----------cH--HHHHHHHHHHcCCCcceEEe
Confidence 33456777777777777776532223221 1122 5556655211 11 3578888999885 332
Q ss_pred -----------CCCCCcccc--ccCCCHHHHHHHHHHHHHHH
Q 017633 337 -----------PSQFEAGFT--SLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 337 -----------~~~~~~~~~--~~~~~~~~i~~~~~~l~~~l 365 (368)
......+++ ...++++|+++++++|++++
T Consensus 414 ~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 414 KTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 001122333 34579999999999998754
No 207
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.85 E-value=2e-19 Score=167.25 Aligned_cols=323 Identities=11% Similarity=-0.018 Sum_probs=185.9
Q ss_pred CcHHHHHHHHHHHHcCCC-CC-CC--ChhHHHHHHHHHhhCC-CCC-----eEEEeCChHHHHHHHHHHHHHh-------
Q 017633 10 SYLQVLAALGETMKKGTS-FG-AP--CLLENVLAEMVISAVP-SIE-----MVRFVNSGTEACMGVLRLARAF------- 72 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~-~~-~~--~~~~~~l~~~l~~~~~-~~~-----~v~~~~~gt~a~~~al~~~~~~------- 72 (368)
.+|.+.+++.+++..... +. ++ .+.+.+++++++++++ +.+ .+++++|||+|+..++..++..
T Consensus 54 ~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~ 133 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEA 133 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 567888888887764322 11 11 2456788888899887 433 4999999999999998766431
Q ss_pred cC----CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcc
Q 017633 73 TG----RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 148 (368)
Q Consensus 73 ~~----~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~ 148 (368)
++ +++|++.. .|......+...|..+...+.....+.. |+++|+++++ ++++++++..
T Consensus 134 ~G~~~~~~~vi~~~--~h~~~~~~~~~~G~~v~~v~~~~~~~~~-------------d~~~l~~~i~---~~t~~v~~~~ 195 (452)
T 2dgk_A 134 AGKPTDKPNLVCGP--VQICWHKFARYWDVELREIPMRPGQLFM-------------DPKRMIEACD---ENTIGVVPTF 195 (452)
T ss_dssp TTCCCSCCEEEESS--CCHHHHHHHHHTTCEEEECCCBTTBCSC-------------CHHHHHHHCC---TTEEEEECBB
T ss_pred cCCCCCCcEEEECC--CcHHHHHHHHHcCceEEEEecCCCCCeE-------------CHHHHHHHHh---hCCEEEEEEc
Confidence 22 24666644 6665555555555544332221101111 8999999997 3677777777
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHh------CCEEEEehhhhch-h--cccCccccccCCCcchhh--hhhhccCCccce
Q 017633 149 VVGNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R--LAYGGAQEYFGVTPDLTT--LGKIIGGGLPVG 217 (368)
Q Consensus 149 ~~~~~g~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~-~--~g~~~~~~~~~~~~di~s--~sK~~~~G~~iG 217 (368)
.++++|.+.+ +++|+++|++| |+++++|++|.++ . .......+.--...|.++ .+|.+.+|+++|
T Consensus 196 ~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G 271 (452)
T 2dgk_A 196 GVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCG 271 (452)
T ss_dssp SCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCE
T ss_pred CCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeE
Confidence 7677888877 99999999996 9999999999765 2 111111110011345544 459666889999
Q ss_pred eeeehH-HHH-HHhcCCCCccc----c--ccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhcC
Q 017633 218 AYGGRR-DIM-EMVAPAGPMYQ----A--GTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAG 286 (368)
Q Consensus 218 ~v~~~~-~~~-~~~~~~~~~~~----~--~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~ 286 (368)
++++++ .+. +.+.....+.. . ...+.+.....+..++++.+..++ +.++..++++++.+.|+ +.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~----~~~ 347 (452)
T 2dgk_A 272 WVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIA----KLG 347 (452)
T ss_dssp EEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTS
T ss_pred EEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hCC
Confidence 998854 332 44321111110 0 001111212333334444443322 33444445555544444 343
Q ss_pred -CceEEe----eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC----C---CCcccc--ccCCCHH
Q 017633 287 -HAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----Q---FEAGFT--SLAHSSD 352 (368)
Q Consensus 287 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~---~~~~~~--~~~~~~~ 352 (368)
+....+ ...+++.+.+.... .......++.+.|.++|+.++.. . ...+|+ ....+++
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~~~---------~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e 418 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKDGE---------DPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMD 418 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECTTC---------CCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHH
T ss_pred CeEEecCCCCCCCeEEEEEEecCcc---------cccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHH
Confidence 222222 23455566553110 00012368999999999976532 1 113344 3445799
Q ss_pred HHHHHHHHHHHHHhh
Q 017633 353 DIQHTITAAEKVLRQ 367 (368)
Q Consensus 353 ~i~~~~~~l~~~l~~ 367 (368)
|++++++.|++++.+
T Consensus 419 ~id~li~~l~~~~~~ 433 (452)
T 2dgk_A 419 FAELLLEDYKASLKY 433 (452)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988753
No 208
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.85 E-value=3.7e-21 Score=173.59 Aligned_cols=312 Identities=10% Similarity=-0.034 Sum_probs=181.9
Q ss_pred CcHHHHHHHHHHHHcC-----CCCC----C--CChhHHHHHHHHHhhCC-C-CCeEEEeCCh-HHHHHHHHHHHHHhcC-
Q 017633 10 SYLQVLAALGETMKKG-----TSFG----A--PCLLENVLAEMVISAVP-S-IEMVRFVNSG-TEACMGVLRLARAFTG- 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~-----~~~~----~--~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g-t~a~~~al~~~~~~~~- 74 (368)
.+|++++++.+.+.+. ..++ + ..+...+++++++++++ . .+++++++|+ ++|+..++..+....+
T Consensus 14 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~ 93 (360)
T 1w23_A 14 LPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTI 93 (360)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCc
Confidence 6788999998887542 0010 1 12356789999999987 3 4699999988 9999998865522111
Q ss_pred CceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHH-HHHcCCCCeEEEEEcccCCCC
Q 017633 75 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~~~~~~~~~~~~~~~~~~~~~ 153 (368)
++.|++...+++ . .......| .+.........+. .|++++++ +++ ++++++++++.++++
T Consensus 94 g~~vi~~~~~~~-~-~~~~~~~g-~~~~v~~~~~~~~-------------~d~~~l~~~~i~---~~~k~v~~~~~~npt 154 (360)
T 1w23_A 94 GNYVLTGSWSEK-A-LKEAKLLG-ETHIAASTKANSY-------------QSIPDFSEFQLN---ENDAYLHITSNNTIY 154 (360)
T ss_dssp EEEEECSHHHHH-H-HHHHHTTS-EEEEEEECGGGTS-------------CSCCCGGGCCCC---TTEEEEEEESEETTT
T ss_pred ccEEEecchhHH-H-HHHHHHhC-CeEEeecccccCc-------------CCccchHhhccC---CCCCEEEEeCCCCCc
Confidence 223333222221 1 11122223 3222111100111 15666766 664 468888887777778
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcCCC
Q 017633 154 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 233 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~~~ 233 (368)
|.+.+ + +. ++||+++|+||+|+.+. .......+ +.-+.++||.+++ .++||+++++++++.+....
T Consensus 155 G~~~~--~-i~------~~~~~~li~D~a~~~~~--~~~~~~~~--di~~~s~sK~~~~-~G~G~~~~~~~~~~~~~~~~ 220 (360)
T 1w23_A 155 GTQYQ--N-FP------EINHAPLIADMSSDILS--RPLKVNQF--GMIYAGAQKNLGP-SGVTVVIVKKDLLNTKVEQV 220 (360)
T ss_dssp TEECS--S-CC------CCCSSCEEEECTTTTTS--SCCCGGGC--SEEEEETTTTTSC-TTCEEEEEEHHHHCSCCTTC
T ss_pred ceecc--c-cc------ccCCceEEEechhhcCC--CCcCcccC--CEEEEEcccccCC-CCcEEEEEcHHHHhhcccCC
Confidence 87765 1 33 27999999999997541 11112222 2224578899973 25999999988877665422
Q ss_pred Ccc--------cccc-CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcC-CceEE--e--eccceEE
Q 017633 234 PMY--------QAGT-LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICG--G--YISGMFG 299 (368)
Q Consensus 234 ~~~--------~~~t-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~--~--~~~~~~~ 299 (368)
... ...+ .+.+..++.++.++++.+.+.+..+.+.++.+..++.+.+.+.+.+ ..... + ..+.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 300 (360)
T 1w23_A 221 PTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT 300 (360)
T ss_dssp CGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEE
T ss_pred cchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEE
Confidence 111 1122 2446667777777887665432333444444444444444433333 21111 2 1233677
Q ss_pred EEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccccc--CCCHHHHHHHHHHHHHHHhh
Q 017633 300 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFTSL--AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~~~--~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.+. +..+..++.+.|.++||.+.++.. ..+|+++ ..+++++++++++|++++++
T Consensus 301 ~~~~-------------~~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 301 FNLR-------------NEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp EECS-------------SHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEcC-------------CCccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 7652 223457788889999999988742 3456544 46999999999999998865
No 209
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.85 E-value=2.8e-20 Score=170.79 Aligned_cols=287 Identities=15% Similarity=0.120 Sum_probs=183.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
++++...+|+++++++++.. ..++++||++|+..+++.+ ..++|.|++.++.|++........
T Consensus 79 ~~~p~~~~le~~lA~l~g~~-~~v~~~sG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~~~~~~~~~-------------- 141 (430)
T 3ri6_A 79 SSNPTVEDLEQRLKNLTGAL-GVLALGSGMAAISTAILTL--ARAGDSVVTTDRLFGHTLSLFQKT-------------- 141 (430)
T ss_dssp -CCHHHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHTH--------------
T ss_pred CCCHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHHHHHH--------------
Confidence 45678899999999998654 4666778999999998766 457889999998887754322100
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcc
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 189 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g 189 (368)
....+.++..++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++||++||+|++|+. +
T Consensus 142 --~~~~G~~~~~v~~~d~~~l~~ai~---~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~~---~ 209 (430)
T 3ri6_A 142 --LPSFGIEVRFVDVMDSLAVEHACD---ETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMTP---P 209 (430)
T ss_dssp --HHHTTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTSC---T
T ss_pred --HHHcCCEEEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc---c
Confidence 001123455566668999999997 47899999988888898888 99999999999999999999962 2
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccceeeee--hH-HH------------------HHHhcCCCCccccccCCCCHHH
Q 017633 190 YGGAQEYFGVTPDLTTLGKIIGG-GLPVGAYGG--RR-DI------------------MEMVAPAGPMYQAGTLSGNPLA 247 (368)
Q Consensus 190 ~~~~~~~~~~~~di~s~sK~~~~-G~~iG~v~~--~~-~~------------------~~~~~~~~~~~~~~t~~~~~~~ 247 (368)
.......++.+..+.|+||.++| |..+|.+++ .+ .+ +...+. ..........++..
T Consensus 210 ~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~--~~~~~~g~~~~~~~ 287 (430)
T 3ri6_A 210 YLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARK--EVFQNLGPSLSPHN 287 (430)
T ss_dssp TTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHH--THHHHHCCCCCHHH
T ss_pred ccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHH--HHHHhcCCCCCHHH
Confidence 22223345555556789999995 444555433 21 11 111110 01111222456777
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEe-----------------eccc-eEEEEeecCCCcc
Q 017633 248 MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-----------------YISG-MFGFFFTEGPVYN 309 (368)
Q Consensus 248 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~ 309 (368)
+..++..++.+ ....++..++++.+.+.|++ .+....+. +.|. ++++.+.
T Consensus 288 a~l~l~~l~~l--~~r~~~~~~na~~la~~L~~----~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~------ 355 (430)
T 3ri6_A 288 AYLQSLGLETM--ALRIERSCQNAQELAHWLLS----IPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE------ 355 (430)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTT----CTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS------
T ss_pred HHHHHhhhhhH--HHHHHHHHHHHHHHHHHHhC----CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC------
Confidence 77766666655 22345556666666666644 33222221 2355 8888873
Q ss_pred cchhcccccHHHHHHHHHHHHcCeeecCCCCCcc-------------------------ccccCCCHHHHHHHHHHHHHH
Q 017633 310 FEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG-------------------------FTSLAHSSDDIQHTITAAEKV 364 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~-------------------------~~~~~~~~~~i~~~~~~l~~~ 364 (368)
+..+..+|.+.|.-.++.++.|+.... ++++.+..|+.+.+++.|+++
T Consensus 356 -------~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~~a 428 (430)
T 3ri6_A 356 -------SKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDILQA 428 (430)
T ss_dssp -------SHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHh
Confidence 234456677777655666666542211 123455668888899999888
Q ss_pred Hh
Q 017633 365 LR 366 (368)
Q Consensus 365 l~ 366 (368)
++
T Consensus 429 l~ 430 (430)
T 3ri6_A 429 LC 430 (430)
T ss_dssp HC
T ss_pred hC
Confidence 63
No 210
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=2.9e-20 Score=171.15 Aligned_cols=159 Identities=19% Similarity=0.141 Sum_probs=120.1
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhh---hhcCCCccccCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLP 106 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 106 (368)
+..+...+++++++++++.. ..++++||++|+..+++.+ ..+++.|++..+.||+...... ...|.
T Consensus 55 ~~~~~~~~l~~~la~~~g~~-~~v~~~sGt~A~~~~l~~~--~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~-------- 123 (421)
T 2ctz_A 55 IMNPTVDVLEKRLAALEGGK-AALATASGHAAQFLALTTL--AQAGDNIVSTPNLYGGTFNQFKVTLKRLGI-------- 123 (421)
T ss_dssp TBCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHH--CCTTCEEEECSCCCHHHHHHHHTHHHHTTC--------
T ss_pred CCChHHHHHHHHHHHHhCCC-ceEEecCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHHHcCC--------
Confidence 35567899999999998744 4456667999999999866 3567899999999988654432 22222
Q ss_pred CCCCCCCCCCCccccc-CCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 107 DSPGVPKGATYETLTA-PFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
++..+ +.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++||+++|+||+|.+
T Consensus 124 -----------~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~----l~~i~~~a~~~g~~livD~~~~~ 185 (421)
T 2ctz_A 124 -----------EVRFTSREERPEEFLALTD---EKTRAWWVESIGNPALNIPD----LEALAQAAREKGVALIVDNTFGM 185 (421)
T ss_dssp -----------EEEECCTTCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGG
T ss_pred -----------EEEEECCCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccc
Confidence 23444 4458999999997 47899999999888998888 99999999999999999999943
Q ss_pred h-hcccCccccccCCCcchh--hhhhhccC-Cccceeeeeh
Q 017633 186 F-RLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR 222 (368)
Q Consensus 186 ~-~~g~~~~~~~~~~~~di~--s~sK~~~~-G~~iG~v~~~ 222 (368)
+ ..+. .++..+|++ |++|.+++ |.++|++++.
T Consensus 186 ~g~~~~-----~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 186 GGYLLR-----PLAWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp GGTSCC-----GGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred ccccCC-----ccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 3 2221 223346765 88999994 7899988663
No 211
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.85 E-value=2.8e-20 Score=174.00 Aligned_cols=311 Identities=17% Similarity=0.111 Sum_probs=182.7
Q ss_pred CCcHHHHHHHHHHHHcCC--C-----CCCCC----hhHHHHHHHHHhhCC-CCC----eEEEeCChHHHHHHHHHHHHHh
Q 017633 9 PSYLQVLAALGETMKKGT--S-----FGAPC----LLENVLAEMVISAVP-SIE----MVRFVNSGTEACMGVLRLARAF 72 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~--~-----~~~~~----~~~~~l~~~l~~~~~-~~~----~v~~~~~gt~a~~~al~~~~~~ 72 (368)
..+|++++++.+.+.+.. . ++... +....++++++++++ +.+ .|+++ ||++++..++..+ .
T Consensus 55 ~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~-sGs~an~~~~~al--l 131 (483)
T 1rv3_A 55 FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY-SGSPANFAVYTAL--V 131 (483)
T ss_dssp CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS-SHHHHHHHHHHHH--T
T ss_pred CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC-CcHHHHHHHHHHh--c
Confidence 367899999988876522 1 11122 344556688889887 432 25555 5778888877655 4
Q ss_pred cCCceEEEEcCCCCCCchhhhh-------hcCCCccccCC--CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEE
Q 017633 73 TGRERIIKFEGCYHGHADPFLV-------KAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 143 (368)
Q Consensus 73 ~~~~~vi~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~ 143 (368)
.++|.|++.+..|.++...... ..|..+....+ ....+. -|+++|++++++. ++++
T Consensus 132 ~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~-------------iD~d~le~~i~~~--~tkl 196 (483)
T 1rv3_A 132 EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGY-------------IDYDRLEENARLF--HPKL 196 (483)
T ss_dssp CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCS-------------BCHHHHHHHHHHH--CCSE
T ss_pred CCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCc-------------CCHHHHHHHHhhc--CCcE
Confidence 5788999998887776432211 11100111111 001111 1899999999842 5677
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhh-ch-hcccC-ccccccCCCcch--hhhhhhccCCcccee
Q 017633 144 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYG-GAQEYFGVTPDL--TTLGKIIGGGLPVGA 218 (368)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~-~~g~~-~~~~~~~~~~di--~s~sK~~~~G~~iG~ 218 (368)
+++ ..++++ .+.+ +++|+++|++||++||+|++|. |+ ..+.. ..+. ..|+ .|++|+++ |+|.|+
T Consensus 197 Ii~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~----~~div~~s~~K~l~-GprgG~ 265 (483)
T 1rv3_A 197 IIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE----HCHVVTTTTHKTLR-GCRAGM 265 (483)
T ss_dssp EEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG----TCSEEEEESSGGGC-CCSCEE
T ss_pred EEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC----CCcEEEecCcccCC-CCCceE
Confidence 777 444444 6666 9999999999999999999984 55 33321 1111 2354 46779984 678899
Q ss_pred eeehHH---------------HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHH
Q 017633 219 YGGRRD---------------IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIID 280 (368)
Q Consensus 219 v~~~~~---------------~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~ 280 (368)
++++++ +.+.+... ...+...+++...+++..++++.+.+ +++.+++.++++++.+.|.+
T Consensus 266 i~~~~~~~~~~~~~g~~~~y~~~~~~~~~--~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 266 IFYRRGVRSVDPKTGKEILYNLESLINSA--VFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EEEECSBCC-------CCBCCHHHHHHHH--HTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcchhhhhccccCcchhhHHHHHhhhh--cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 988764 22222210 00011123445556666667776543 23455566666666666655
Q ss_pred HHHhcCCceEEee-ccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeec----CCCC-----Ccccccc---
Q 017633 281 AGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PSQF-----EAGFTSL--- 347 (368)
Q Consensus 281 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~~~-----~~~~~~~--- 347 (368)
. ++....++ ...+.++.+.. ...+..++.+.|.+.||.+. |+.. ..+|+++
T Consensus 344 ~----g~~~~~~~~~~~~~~v~~~~------------~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~ 407 (483)
T 1rv3_A 344 L----GYKIVTGGSDNHLILVDLRS------------KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPAL 407 (483)
T ss_dssp T----TCEEGGGSCSSSEEEEEGGG------------GTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHH
T ss_pred c----CCEeccCCCCCceEEEeccC------------CCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCc
Confidence 3 43221111 12455666532 11124667888888999998 6531 2344432
Q ss_pred ---CCCHHHHHHHHHHHHHHHh
Q 017633 348 ---AHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 348 ---~~~~~~i~~~~~~l~~~l~ 366 (368)
.++++|++++++.|++++.
T Consensus 408 ~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 408 TSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH
Confidence 2238999999999998875
No 212
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.85 E-value=4.5e-20 Score=169.45 Aligned_cols=289 Identities=13% Similarity=0.066 Sum_probs=175.7
Q ss_pred CcHHHHHHHHHHHHc------CCCCCCCChhHHHHHHHHHhhCCCCCeEE--EeCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVR--FVNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~--~~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+.+++++++.++... ...+.++.....++++.++++++...... +.+||++|+..++... ..++|.|++.
T Consensus 36 n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al--~~~Gd~Vl~~ 113 (431)
T 3ht4_A 36 NQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGI--LRPGDELLYI 113 (431)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTT--CCTTCEEEEC
T ss_pred HHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHh--CCCCCEEEEe
Confidence 345677777664211 13456677888999999999997433222 1348999999998755 3567888888
Q ss_pred cCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-----CCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 82 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
.+..|+.+...+...+. ........+.+++.++. .|+++++++++ ++++++++++..++++..
T Consensus 114 ~~~~y~~~~~~~~l~g~---------~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~---~~tk~V~i~~sp~np~~~ 181 (431)
T 3ht4_A 114 TGKPYDTLEEIVGVRGK---------GVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH---SNTKMIGIQRSKGYATRP 181 (431)
T ss_dssp SSSCCTTHHHHTTSSSC---------SSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC---TTEEEEEEECSCTTSSSC
T ss_pred CCCCchhHHHHHhhccc---------ccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC---CCCeEEEEECCCCCCCCC
Confidence 73444544443333221 11112223334444443 28999999997 478999998644443333
Q ss_pred cCCHHHHHHHHHHHHH--hCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC--ccceeeeehHHHHHHhcC
Q 017633 157 APKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~--~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G--~~iG~v~~~~~~~~~~~~ 231 (368)
..+.+.+++|+++|++ ||+++|+||+|..+ ..... ..++.+..+.|+||+++|| .+.|++++++++++.+..
T Consensus 182 ~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~---~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~ 258 (431)
T 3ht4_A 182 SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---CHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAY 258 (431)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---GGTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc---cccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHH
Confidence 4444559999999999 99999999999765 32221 1234444556899999864 567999999988887753
Q ss_pred CC-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcc
Q 017633 232 AG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 232 ~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
.. ....+.+.+++...+.++...++.+ +.+.++..++++++++.|++..... +. ...+..+.++.+.+.
T Consensus 259 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p~-~~~~~~~li~~i~l~------ 329 (431)
T 3ht4_A 259 RLTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSPA-WNAPRTDLIQSVQFD------ 329 (431)
T ss_dssp HHSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEESC-TTSCCSSSCCEEECC------
T ss_pred HhccCCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecCC-CCCCCccEEEEEEeC------
Confidence 10 1111222222222233344455543 3456778888888888888764321 11 011122336666652
Q ss_pred cchhcccccHHHHHHHHHHHHc
Q 017633 310 FEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+.....++++.|.+.
T Consensus 330 -------~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 330 -------DKDRMIAFCQAIQYA 344 (431)
T ss_dssp -------CHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHHHHHHhc
Confidence 345567889988876
No 213
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.85 E-value=1.8e-19 Score=167.11 Aligned_cols=313 Identities=15% Similarity=0.074 Sum_probs=176.8
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC-----------ChhHHHHHHHHHhhCC-CCC---eEEEeCChHHHHHHHHHHHHHhcC
Q 017633 10 SYLQVLAALGETMKKGTSFGAP-----------CLLENVLAEMVISAVP-SIE---MVRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~-----------~~~~~~l~~~l~~~~~-~~~---~v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.+|+|++++...+.+....+++ .+++...+++++++++ +.+ ..++++||++|+..++..+ ..+
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al--~~p 143 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL--LQP 143 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH--CCS
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHH--cCC
Confidence 5889999998877652211111 2333445588999997 332 3466678999999999766 457
Q ss_pred CceEEEEcCCCCCCchh-------hhhhcCCCccccCCC--CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEE
Q 017633 75 RERIIKFEGCYHGHADP-------FLVKAGSGVATLGLP--DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 145 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~ 145 (368)
+|.|++.+..+.++... .+...+.......++ ...+. .|++++++.++.+ ++++++
T Consensus 144 GD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~-------------iD~d~le~~l~~~--~~klIi 208 (490)
T 2a7v_A 144 HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGL-------------IDYNQLALTARLF--RPRLII 208 (490)
T ss_dssp CEECCC-------------------------------CCBCTTTCS-------------BCHHHHHHHHHHH--CCSEEE
T ss_pred CCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCC-------------cCHHHHHHHHhhc--CCcEEE
Confidence 88898887766543211 111222211111111 00111 1899999999753 455666
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccC-ccccccCCCcchhhhhhhccCCccceeeeeh
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYG-GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 222 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~-~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~ 222 (368)
+...+ .+...+ +++|+++|++||++|++|++| .|+ ..|.. ..+. +.+.-+.|++|+++ |++.|+++++
T Consensus 209 ~~~s~--~~~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l~-Gp~GG~i~~~ 279 (490)
T 2a7v_A 209 AGTSA--YARLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLR-GARSGLIFYR 279 (490)
T ss_dssp ECCSS--CCSCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGGC-SCSCEEEEEE
T ss_pred EcCCC--CCCccc----HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccCc-cccchheeec
Confidence 54322 223445 999999999999999999998 455 33322 1111 22222346789995 5678998887
Q ss_pred HH---------------HHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHh
Q 017633 223 RD---------------IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 284 (368)
Q Consensus 223 ~~---------------~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~ 284 (368)
++ +.+.++.. .+.+...+++...+++..+++..... +++.+++.++++++++.|.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~l~~~i~~~--~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~--- 354 (490)
T 2a7v_A 280 KGVKAVDPKTGREIPYTFEDRINFA--VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER--- 354 (490)
T ss_dssp CSEEEEETTTEEEEECCCHHHHHHH--HTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred cchhcccccccchhhHHHHHHHHHH--hcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc---
Confidence 53 33333310 00111112345555555556655433 345667777888888888763
Q ss_pred cCCceEEe-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC----CC-C----cccc------ccC
Q 017633 285 AGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----QF-E----AGFT------SLA 348 (368)
Q Consensus 285 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~-~----~~~~------~~~ 348 (368)
++..... ...+++++++... ..+..++.+.|.++||.+..+ .. + .+|+ +..
T Consensus 355 -G~~v~~~~t~t~lv~vdl~~~------------g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g 421 (490)
T 2a7v_A 355 -GYSLVSGGTDNHLVLVDLRPK------------GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ 421 (490)
T ss_dssp -TCEEGGGSCSSSEEEEECTTT------------TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred -CcEEecCCCCCeEEEEEeCCC------------CCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCC
Confidence 3322111 2245777776421 123467888898999999743 11 1 1233 235
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 017633 349 HSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 349 ~~~~~i~~~~~~l~~~l~ 366 (368)
.+++|++++.+.|.+++.
T Consensus 422 ~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 422 FREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 689999999999988874
No 214
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.85 E-value=1.5e-18 Score=163.54 Aligned_cols=313 Identities=13% Similarity=0.020 Sum_probs=174.6
Q ss_pred hHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHh-------cC----CceEEEEcCCCCCCchhhhhhcCCC
Q 017633 34 LENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAF-------TG----RERIIKFEGCYHGHADPFLVKAGSG 99 (368)
Q Consensus 34 ~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~-------~~----~~~vi~~~~~~~~~~~~~~~~~~~~ 99 (368)
.+.++.+++++.++ + .+.+++++|||+|+..++..++.. .+ .+.+|+.+...|.....+....+.+
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g 212 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFG 212 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCC
Confidence 45667778888887 4 679999999999999999887532 23 1424444445555555444444432
Q ss_pred ---ccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 017633 100 ---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 173 (368)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~ 173 (368)
+...+... .+.. |+++|++++++. ..+++++++...++++|.+.+ +++|+++|++|
T Consensus 213 ~~~v~~v~~~~-~~~~-------------d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~ 274 (504)
T 2okj_A 213 TDNVILIKCNE-RGKI-------------IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKY 274 (504)
T ss_dssp GGGEEEECBCT-TSCB-------------CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHHH
T ss_pred cccEEEEecCC-CCCC-------------CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHc
Confidence 22211111 1111 899999999741 125788888777777888877 99999999999
Q ss_pred CCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCccceeeeehH-HHHHH-hcCCCCccccc--------
Q 017633 174 GALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR-DIMEM-VAPAGPMYQAG-------- 239 (368)
Q Consensus 174 ~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~-~~~~~-~~~~~~~~~~~-------- 239 (368)
|+++++|++|.++ .....+.....++ .+|+++ .+|.+++++++|++++++ ++.+. +.....+..+.
T Consensus 275 g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (504)
T 2okj_A 275 NLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSY 354 (504)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGG
T ss_pred CCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcC
Confidence 9999999999766 3221111111222 456655 459998778999998865 45543 22111111100
Q ss_pred ---------cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEE---eeccceEEEEeecCCC
Q 017633 240 ---------TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG---GYISGMFGFFFTEGPV 307 (368)
Q Consensus 240 ---------t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 307 (368)
+.....+.+.+++.++..-.-+++.++..++++++.+.|++ .+..... .....++.+...+...
T Consensus 355 ~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~p~~~~v~f~~~~~~~ 430 (504)
T 2okj_A 355 DTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN----REEFEMVFNGEPEHTNVCFWYIPQSL 430 (504)
T ss_dssp CCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----CTTEEESSSSCCSSSCEEEEECCGGG
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEecCCCCeEEEEEEEeCccc
Confidence 01123555555544443110022334444455555544443 3211111 1233444444321100
Q ss_pred cccch---hcccccHHHHHHHHHHHHcCee-ecCC---CC-Cccccc---cCCCHHHHHHHHHHHHHHHhhC
Q 017633 308 YNFED---AKKSETTKFARFYRGMLEEGVY-FAPS---QF-EAGFTS---LAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 308 ~~~~~---~~~~~~~~~~~~~~~l~~~Gi~-~~~~---~~-~~~~~~---~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
..... ..........++.+.|.++|+. +.+. +. ..+|++ ..++++|+++++++|+++++++
T Consensus 431 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 431 RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp SSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred cccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 00000 0000001245788899999954 4322 21 244543 4479999999999999987653
No 215
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=6.7e-19 Score=160.34 Aligned_cols=281 Identities=14% Similarity=0.090 Sum_probs=173.5
Q ss_pred CcHHHHHHHHHHHHc------CCCCCCCChhHHHHHHHHHhhCCCCCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEE
Q 017633 10 SYLQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKF 81 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~ 81 (368)
+.++|++++.++... ...|+++.....+|++.++++++..+.+++ ++||++|+..++..+ ..++|.|++.
T Consensus 30 n~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~al--l~~GD~Vl~~ 107 (409)
T 3jzl_A 30 NQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGI--LRPDDELLYI 107 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHH--CCTTCEEEEC
T ss_pred hHHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHh--cCCCCEEEEe
Confidence 345677888775321 234667777889999999999875444443 789999999998765 3567888888
Q ss_pred c-CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-----CCHHHHHHHHHcCCCCeEEEEEcc----cCC
Q 017633 82 E-GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEP----VVG 151 (368)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~~~~~~~~~~~~~~~~----~~~ 151 (368)
. +.|.+.. ..+...+. ........+.++..++. .|+++++++++ ++++++++++ .++
T Consensus 108 ~~~~y~~~~-~~~~~~g~---------~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~---~~tklV~i~~s~g~p~n 174 (409)
T 3jzl_A 108 TGQPYDTLE-EIVGIRKQ---------GQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT---PKTKMIGIQRSRGYADR 174 (409)
T ss_dssp SSSCCTTHH-HHHTSSSS---------SSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC---TTEEEEEEECSCTTSSS
T ss_pred CCCCcHhHH-HHHhcccc---------hhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc---CCCeEEEEECCCCCCCC
Confidence 7 5555432 11111110 00001111222333332 28999999987 4789999998 777
Q ss_pred CCCcccCCHHHHHHHHHHHHH--hCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC--ccceeeeehHHHH
Q 017633 152 NSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGGRRDIM 226 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G--~~iG~v~~~~~~~ 226 (368)
++|.+.+ +++|+++|++ ||+++++||+|..+ .... ...++.+.-+.|+||.++|+ ...||++++++++
T Consensus 175 ptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~~~~~~---p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li 247 (409)
T 3jzl_A 175 PSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEFVEYQE---PPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALV 247 (409)
T ss_dssp CCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTTTSSCC---SGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHH
T ss_pred CcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccccccCC---ccccCCeEEEECccccCCccCCceEEEEEeCHHHH
Confidence 7887776 9999999999 99999999999644 1111 11233333345899999964 4568899999988
Q ss_pred HHhcCCC-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-----eEEE
Q 017633 227 EMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-----MFGF 300 (368)
Q Consensus 227 ~~~~~~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~ 300 (368)
+.+.... ....+...+.....+.++...++.+ +...++..++++++++.|++. +... .++... ++.+
T Consensus 248 ~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~----g~~v-~p~~~~~~~~~i~~i 320 (409)
T 3jzl_A 248 DLCGYRLTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEF----GVEA-DPVWDAPRTDLIQSV 320 (409)
T ss_dssp HHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT----TCEE-ESCTTSCCSSSCCEE
T ss_pred HHHHHHhccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhC----CCcc-cCCCCCCCccEEEEE
Confidence 8876311 1111122222222233444455433 345666777777777777764 3321 222222 5566
Q ss_pred EeecCCCcccchhcccccHHHHHHHHHHHHcC
Q 017633 301 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 332 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 332 (368)
.+. +.....++++.|.+..
T Consensus 321 ~l~-------------~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 321 SFH-------------NKEKMVAFAQAIQAAS 339 (409)
T ss_dssp ECS-------------CHHHHHHHHHHHHHTS
T ss_pred EeC-------------CHHHHHHHHHHHHhcC
Confidence 552 4455678999998874
No 216
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=1.8e-18 Score=163.30 Aligned_cols=311 Identities=14% Similarity=0.079 Sum_probs=175.7
Q ss_pred hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHh-----c-CCc------eEEEEcCCCCCCchhhhhhcCC-
Q 017633 33 LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-----T-GRE------RIIKFEGCYHGHADPFLVKAGS- 98 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~-----~-~~~------~vi~~~~~~~~~~~~~~~~~~~- 98 (368)
+.+.+++++++++++ +.+.+++++|||+|+..++..++.. . +++ .|++ +...|.+...+....|.
T Consensus 148 ~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~-s~~~h~s~~~~~~~~g~g 226 (515)
T 2jis_A 148 LMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFT-SKECHYSIQKGAAFLGLG 226 (515)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEE-ETTSCTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEE-CCCccHHHHHHHHHcCCC
Confidence 456778888999887 5679999999999999999877531 1 232 4444 44456655555554444
Q ss_pred --CccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 017633 99 --GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 173 (368)
Q Consensus 99 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~ 173 (368)
.+...+... .+.. |+++|++++++. ..+++++++...++++|.+.+ +++|+++|++|
T Consensus 227 ~~~v~~v~~~~-~~~~-------------d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~ 288 (515)
T 2jis_A 227 TDSVRVVKADE-RGKM-------------VPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEAIADVCQRH 288 (515)
T ss_dssp GGGEEEECBCT-TSCB-------------CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHH
T ss_pred CCcEEEEecCC-CCcC-------------CHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHHHHHHHHHc
Confidence 222111111 1111 899999999741 124788888777777888887 99999999999
Q ss_pred CCEEEEehhhhch-hcccCccccccCC-Ccchhh--hhhhccCCccceeeeehHH--HHHH-hcCCCCcc----------
Q 017633 174 GALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--IMEM-VAPAGPMY---------- 236 (368)
Q Consensus 174 ~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~iG~v~~~~~--~~~~-~~~~~~~~---------- 236 (368)
|+++++|++|+++ .....+.....++ .+|+++ ++|.++++.++|+++++++ +.+. +.....+.
T Consensus 289 g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 368 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVA 368 (515)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGG
T ss_pred CCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCccccccc
Confidence 9999999999876 3322221112233 457665 5799987788999988755 6553 21111111
Q ss_pred -ccccC------CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEeecCCCcc
Q 017633 237 -QAGTL------SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 309 (368)
Q Consensus 237 -~~~t~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
...++ ....+.+.+++.++..-.-+++.++..++++++.+.|++. .++..........+.+...+.....
T Consensus 369 ~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~p~~~~~ 445 (515)
T 2jis_A 369 LDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKR---EGFELVMEPEFVNVCFWFVPPSLRG 445 (515)
T ss_dssp GCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTEEESSCCSSSEEEEEECCGGGTT
T ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCeeEEEEEEeCccccc
Confidence 01111 1123444444433321100224455555566665555542 1221111111233344332110000
Q ss_pred cchhccccc--H----HHHHHHHHHHHcCeeecC-----CCCCcccc---ccCCCHHHHHHHHHHHHHHHhhC
Q 017633 310 FEDAKKSET--T----KFARFYRGMLEEGVYFAP-----SQFEAGFT---SLAHSSDDIQHTITAAEKVLRQI 368 (368)
Q Consensus 310 ~~~~~~~~~--~----~~~~~~~~l~~~Gi~~~~-----~~~~~~~~---~~~~~~~~i~~~~~~l~~~l~~~ 368 (368)
. ..... . ....+.+.|.++|+.+.. +....+|+ +..++++|++++++.|++++.++
T Consensus 446 ~---~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~~ 515 (515)
T 2jis_A 446 K---QESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQDL 515 (515)
T ss_dssp C---TTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred c---ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 0 00000 0 112467888889976532 11223444 44589999999999999988764
No 217
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.83 E-value=5e-19 Score=166.25 Aligned_cols=323 Identities=12% Similarity=-0.030 Sum_probs=187.0
Q ss_pred CCcHHHHHHHHHHHHcCCC-C-CC--CChhHHHHHHHHHhhCC-C--CC---eEEEeCChHHHHHHHHHHHHHh-c----
Q 017633 9 PSYLQVLAALGETMKKGTS-F-GA--PCLLENVLAEMVISAVP-S--IE---MVRFVNSGTEACMGVLRLARAF-T---- 73 (368)
Q Consensus 9 ~~~~~v~~a~~~~~~~~~~-~-~~--~~~~~~~l~~~l~~~~~-~--~~---~v~~~~~gt~a~~~al~~~~~~-~---- 73 (368)
..+|.+.+++.+.+..... + .+ ..+.+.+++++++++++ + .+ ...+++||++|+..++..++.. .
T Consensus 67 ~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~ 146 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (502)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHH
Confidence 3578899999887765322 1 11 22456678888899886 3 23 3446899999999998665432 0
Q ss_pred -CCc-----eEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEc
Q 017633 74 -GRE-----RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 147 (368)
Q Consensus 74 -~~~-----~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~ 147 (368)
.++ +|++...+ |.....++...|.++.........+.. |+++++++++ ++++++++.
T Consensus 147 ~~G~~~~~~~vi~~~~~-h~s~~~~~~~~G~~~~~v~~~~~~~~~-------------d~~~l~~~i~---~~t~~v~~~ 209 (502)
T 3hbx_A 147 AEGKPVDKPNIVTGANV-QVCWEKFARYFEVELKEVKLSEGYYVM-------------DPQQAVDMVD---ENTICVAAI 209 (502)
T ss_dssp HTTCCCSCCEEEEETTC-CHHHHHHHHHTTCEEEEECCBTTBCSC-------------CHHHHHHHCC---TTEEEEEEE
T ss_pred hcCCCCCCcEEEEcCCc-hHHHHHHHHHcCceeEEEecCCCcCcC-------------CHHHHHHHHh---hCCEEEEEe
Confidence 122 66665544 444445555555544332221111111 8999999997 467777776
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHh------CCEEEEehhhhch-h--cccCccccccCCCcchh--hhhhhccCCccc
Q 017633 148 PVVGNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R--LAYGGAQEYFGVTPDLT--TLGKIIGGGLPV 216 (368)
Q Consensus 148 ~~~~~~g~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~-~--~g~~~~~~~~~~~~di~--s~sK~~~~G~~i 216 (368)
..++++|.+.+ +++|.++|++| |++|++|++|.++ . .......+.--...|.+ +..|.+.++.++
T Consensus 210 ~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~ 285 (502)
T 3hbx_A 210 LGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI 285 (502)
T ss_dssp BSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSC
T ss_pred cCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCe
Confidence 66667788888 99999999999 9999999999764 1 11111111101134554 455888777899
Q ss_pred eeeeeh-HHHH-HHhcCCCCc----ccc--ccCCCCHHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHHHHHHHHHhc
Q 017633 217 GAYGGR-RDIM-EMVAPAGPM----YQA--GTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 217 G~v~~~-~~~~-~~~~~~~~~----~~~--~t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
|+++.+ +..+ +.+.....+ ... ..++.+.....+..+++..+..++ ..++..++++++++.|.+ .
T Consensus 286 G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~ 361 (502)
T 3hbx_A 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK----T 361 (502)
T ss_dssp EEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred EEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----C
Confidence 988664 4333 222110000 000 012222223444445555443333 344455555555555544 4
Q ss_pred CCceEEe--eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCC-------cccc--ccCCCHHHH
Q 017633 286 GHAICGG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-------AGFT--SLAHSSDDI 354 (368)
Q Consensus 286 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~-------~~~~--~~~~~~~~i 354 (368)
+...... ...+++.+.+... ......++.+.|.++|+.+.....+ .+|+ ...++++++
T Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~-----------~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edi 430 (502)
T 3hbx_A 362 ERFNIVSKDEGVPLVAFSLKDS-----------SCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLA 430 (502)
T ss_dssp TCEEECSCSSSSSEEEEEESSC-----------SSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHH
T ss_pred CCEEEEeCCCCceEEEEEecCC-----------CcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHH
Confidence 4221222 2445666665321 1112358999999999997643221 2333 455689999
Q ss_pred HHHHHHHHHHHhh
Q 017633 355 QHTITAAEKVLRQ 367 (368)
Q Consensus 355 ~~~~~~l~~~l~~ 367 (368)
+++++.|++++++
T Consensus 431 d~li~~L~~~l~~ 443 (502)
T 3hbx_A 431 ERLVIDIEKVMRE 443 (502)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 218
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.83 E-value=2e-20 Score=172.31 Aligned_cols=300 Identities=10% Similarity=-0.060 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHc-CC-CCCCCC-h-h---HHHHHHHHHhhCC-------CCCeEEEeCChHHHHHHHHHHHHH------
Q 017633 12 LQVLAALGETMKK-GT-SFGAPC-L-L---ENVLAEMVISAVP-------SIEMVRFVNSGTEACMGVLRLARA------ 71 (368)
Q Consensus 12 ~~v~~a~~~~~~~-~~-~~~~~~-~-~---~~~l~~~l~~~~~-------~~~~v~~~~~gt~a~~~al~~~~~------ 71 (368)
+.+++++.+.+.. .. ...|+. . . ..+|++.++++++ +++++++|+|+++++..++..+..
T Consensus 72 ~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~ 151 (427)
T 2hox_A 72 YWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATP 151 (427)
T ss_dssp HHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCT
T ss_pred HHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhcccccc
Confidence 3566666666532 22 211222 2 2 5777777777663 468999999999999999876510
Q ss_pred hcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCC
Q 017633 72 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 151 (368)
Q Consensus 72 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~ 151 (368)
..+++.|++..++|...... ....|..+. .+.. |+++|++.++ ++++++++...+|
T Consensus 152 ~~~Gd~Vlv~~P~y~~~~~~-~~~~g~~~~-------------------~~~~-d~~~l~~~~~---~~~k~v~l~~p~N 207 (427)
T 2hox_A 152 DAPESKVVAHAPFYPVFREQ-TKYFDKKGY-------------------VWAG-NAANYVNVSN---PEQYIEMVTSPNN 207 (427)
T ss_dssp TSCCEEEEECSSCCHHHHHH-HHHSCBTTE-------------------EEEE-EGGGGTTCSC---GGGEEEEEESSCT
T ss_pred CCCCCEEEEeCCCcccHHHH-HHHcCCeee-------------------eecC-CHHHHHHhhc---CCceEEEEcCCCC
Confidence 24678899988888654333 233333221 1111 6777777665 2456655554455
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeee-hHHHHHHh
Q 017633 152 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGG-RRDIMEMV 229 (368)
Q Consensus 152 ~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~-~~~~~~~~ 229 (368)
++|.+++ +.+ + ++..+.|+++.+ ......... .+....+.||||.++ +|+|+||+++ ++++++.+
T Consensus 208 PtG~~~~--~~l-------~--~~~~i~d~~~~~-~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l 274 (427)
T 2hox_A 208 PEGLLRH--AVI-------K--GCKSIYDMVYYW-PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNL 274 (427)
T ss_dssp TTCCCCC--CSS-------T--TCEEEEECTTCS-TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHH
T ss_pred CcccccH--HHH-------c--CCCEEEeecccC-CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHH
Confidence 5676666 312 2 556778877742 000111111 233444669999998 8999999998 58888887
Q ss_pred cCCCCccccccCCCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHHHHHHHhc-CCc-----------
Q 017633 230 APAGPMYQAGTLSGNPLAMTAGIHTLKRLK---------EPGTYEYLNKITGELTQGIIDAGKKA-GHA----------- 288 (368)
Q Consensus 230 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~----------- 288 (368)
.. .....+++++.+++.++..+++... -+.+.++.++..+..++.+.+.+.+. +..
T Consensus 275 ~~---~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 351 (427)
T 2hox_A 275 LN---YMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN 351 (427)
T ss_dssp HH---HHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred HH---HHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccc
Confidence 63 2233445788888888887776431 13333333333333444444444433 111
Q ss_pred ---eEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHH-HcCeeecCCC-----CCccccccCCCHHHHHHHHH
Q 017633 289 ---ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTIT 359 (368)
Q Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----~~~~~~~~~~~~~~i~~~~~ 359 (368)
...+..+.++|+.+.. +..++++.|+ ++||.++++. ...+|+++..++++++++++
T Consensus 352 ~~~~~~p~~g~f~~~~~~~---------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l~~~l~ 416 (427)
T 2hox_A 352 YFRRMRPPSPSYAWVKCEW---------------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMY 416 (427)
T ss_dssp TTTEEECCCCSEEEEEECS---------------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHHH
T ss_pred cccccCCCCceEEEEECCC---------------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHHHHHHH
Confidence 1123346677877631 1245677765 7899999873 23467777789999999999
Q ss_pred HHHHHHh
Q 017633 360 AAEKVLR 366 (368)
Q Consensus 360 ~l~~~l~ 366 (368)
+|++++.
T Consensus 417 ~l~~~~~ 423 (427)
T 2hox_A 417 YLKDMVK 423 (427)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999875
No 219
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.83 E-value=1e-19 Score=166.46 Aligned_cols=218 Identities=10% Similarity=-0.007 Sum_probs=146.3
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
+.++...++++.++++++.. .+++++||++|+..+++.. ..++|.||+..+.|++........
T Consensus 79 ~~~p~~~~le~~lA~l~g~~-~~i~~ssGt~Ai~~al~~l--~~~Gd~Vi~~~~~y~~~~~~~~~~-------------- 141 (415)
T 2fq6_A 79 RGTLTHFSLQQAMCELEGGA-GCVLFPCGAAAVANSILAF--IEQGDHVLMTNTAYEPSQDFCSKI-------------- 141 (415)
T ss_dssp TCCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHTT--CCTTCEEEEETTSCHHHHHHHHHT--------------
T ss_pred CCCchHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHH--------------
Confidence 35677899999999998643 5666789999999998754 246789999988887643222111
Q ss_pred CCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCEEEEehhhhchh
Q 017633 110 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGFR 187 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~~ 187 (368)
....+.++..++.+|+++++++++ ++++++++++.+|++|.+.+ +++|+++|++ ||+++|+|++|+...
T Consensus 142 --l~~~G~~v~~v~~~d~~~le~ai~---~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a~~~ 212 (415)
T 2fq6_A 142 --LSKLGVTTSWFDPLIGADIVKHLQ---PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAAGV 212 (415)
T ss_dssp --GGGGTCEEEEECTTCGGGGGGGCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTTTT
T ss_pred --HHHcCcEEEEECCCCHHHHHHhhc---cCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCcccc
Confidence 001122344455558999998887 46899999988888899998 9999999999 999999999996321
Q ss_pred cccCccccccCCCcchhhhhhhccC-Cc-cceeeeehHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCCHHH
Q 017633 188 LAYGGAQEYFGVTPDLTTLGKIIGG-GL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 265 (368)
Q Consensus 188 ~g~~~~~~~~~~~~di~s~sK~~~~-G~-~iG~v~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~ 265 (368)
.... . .++.+.-+.|++|.+++ |. .+|++++++++++.+... ........++..+..+..+++.+ ....+
T Consensus 213 ~~~p--~-~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~---~~~~G~~~~~~~a~~~~~~l~~l--~~r~~ 284 (415)
T 2fq6_A 213 LFKA--L-DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLREN---AYLMGQMVDADTAYITSRGLRTL--GVRLR 284 (415)
T ss_dssp SSCG--G-GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHH---HHHTTCCCCHHHHHHHHHHHHHH--HHHHH
T ss_pred cCCc--c-ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhhhhHH--HHHHH
Confidence 1111 1 23332223478899994 43 468888887777666521 11112234666666666666644 22345
Q ss_pred HHHHHHHHHHHHHHHH
Q 017633 266 YLNKITGELTQGIIDA 281 (368)
Q Consensus 266 ~~~~~~~~l~~~l~~~ 281 (368)
+..++.+.+++.|++.
T Consensus 285 ~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 285 QHHESSLKVAEWLAEH 300 (415)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5666777777766653
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.82 E-value=9.8e-19 Score=159.75 Aligned_cols=282 Identities=16% Similarity=0.107 Sum_probs=172.8
Q ss_pred cHHHHHHHHHHHHc------CCCCCCCChhHHHHHHHHHhhCCCCCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 11 YLQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 11 ~~~v~~a~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+.|++++.+.... ...|+++.....+|++.++++++....+++ ++||++|+..++..+ ..++|.|++.+
T Consensus 46 ~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~al--l~pGD~Vl~~~ 123 (427)
T 3hvy_A 46 QLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGN--LRPNDTMMSIC 123 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHT--CCTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHh--cCCCCEEEEeC
Confidence 35677777664221 234566777788999999999875444432 789999999888755 45788999987
Q ss_pred -CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC----CCHHHHHHHHHcCCCCeEEEEEcc----cCCCC
Q 017633 83 -GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----NDVSALENLFENNKGEIAAIILEP----VVGNS 153 (368)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~~~~~~~~~~~~~~~~----~~~~~ 153 (368)
+.|++... .. ++.+. .........+.++..++. .|+++++++++++ ++++++++++ .++++
T Consensus 124 ~~~y~~~~~-~~--g~~~~------~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp~npt 193 (427)
T 3hvy_A 124 GMPYDTLHD-II--GMDDS------KKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKD-DSIKLIHIQRSTGYGWRKS 193 (427)
T ss_dssp SSCCGGGHH-HH--TCCTT------CCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSSSSCC
T ss_pred CCCchhHHH-Hh--ccccc------hhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCCCCcc
Confidence 66665421 11 00000 000111112333333433 3899999999853 3789999988 66666
Q ss_pred CcccCCHHHHHHHHHHHHH--hCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccCC--ccceeeeehHHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGGRRDIMEM 228 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~G--~~iG~v~~~~~~~~~ 228 (368)
|.+.+ +++|+++|++ ||+++++|++|..+ ..... ..++.+.-+.|+||.++|+ .+.|++++++++++.
T Consensus 194 g~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~ 266 (427)
T 3hvy_A 194 LRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQ 266 (427)
T ss_dssp CCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHH
T ss_pred ccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCC---cccCCeEEEECCcccccccccceEEEEEECHHHHHH
Confidence 76665 9999999999 89999999999644 11111 1233333346899999954 467888999999888
Q ss_pred hcCCC-CccccccCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-----eEEEEe
Q 017633 229 VAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-----MFGFFF 302 (368)
Q Consensus 229 ~~~~~-~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 302 (368)
++... ....+.+.+++.-.+..+...++.+ +.+.++..+++.++++.|++. +... .++... ++.+.+
T Consensus 267 l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la~~L~~~----g~~V-~p~~~~~~~~li~~~~l 339 (427)
T 3hvy_A 267 ATFRVTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCARIMELA----GFDV-LPKYNDKRTDIIQAIKF 339 (427)
T ss_dssp HHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT----TCEE-ESCTTSCCSSSEEEEEC
T ss_pred HHHHhhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhC----CCee-cCCCCCCCceEEEEEeC
Confidence 76311 1111122222222244444444433 345667777777887777764 3321 222222 556655
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
. +.....++++.|...
T Consensus 340 ~-------------~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 340 N-------------DEKKLIDFIKGIQTA 355 (427)
T ss_dssp S-------------SHHHHHHHHHHHHHT
T ss_pred C-------------CHHHHHHHHHHhccc
Confidence 2 345567888888775
No 221
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.82 E-value=2.8e-18 Score=156.69 Aligned_cols=280 Identities=15% Similarity=0.110 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHc------CCCCCCCChhHHHHHHHHHhhCCCCCeEEE--eCChHHHHHHHHHHHHHhcCCceEEEEc-
Q 017633 12 LQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFE- 82 (368)
Q Consensus 12 ~~v~~a~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~--~~~gt~a~~~al~~~~~~~~~~~vi~~~- 82 (368)
++|++++.++... ...|+++.....+|++.++++++....+++ ++||++|+..++..+ ..++|.|++..
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~al--l~pGD~Vl~~~~ 123 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGN--LRPGNTMLSVCG 123 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHH--CCTTCEEEESSS
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHH--hCCCCEEEEeCC
Confidence 5677777654211 234566777789999999999975444443 789999999988765 35678898887
Q ss_pred CCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCC-----CCHHHHHHHHHcCCCCeEEEEEcc----cCCCC
Q 017633 83 GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEP----VVGNS 153 (368)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~~~~~~~~~~~~~~~~----~~~~~ 153 (368)
+.|++.... +...+.. ........+.++..++. .|+++++++++++ ++++++++++ .++++
T Consensus 124 ~~y~~~~~~-~g~~~~~--------~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~npt 193 (427)
T 3i16_A 124 EPYDTLHDV-IGITENS--------NMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRRA 193 (427)
T ss_dssp SCCGGGHHH-HTCSCCC--------SSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCC
T ss_pred CccHHHHHH-Hhccccc--------hHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCc
Confidence 666553211 1000000 00011112223333333 2899999999852 3788999988 66667
Q ss_pred CcccCCHHHHHHHHHHHHH--hCCEEEEehhhhch-hcccCccccccCCCcchhhhhhhccC-C-ccceeeeehHHHHHH
Q 017633 154 GFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEM 228 (368)
Q Consensus 154 g~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~-~~g~~~~~~~~~~~~di~s~sK~~~~-G-~~iG~v~~~~~~~~~ 228 (368)
|.+.+ +++|+++|++ ||+++++|++|..+ .... ...++.+.-+.|+||.++| | .+.|++++++++++.
T Consensus 194 g~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~---p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~ 266 (427)
T 3i16_A 194 LLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKE---PTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEK 266 (427)
T ss_dssp CCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSC---GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHH
T ss_pred ccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCC---ccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHH
Confidence 77766 9999999999 99999999999744 1111 1123443334689999995 4 577999999999888
Q ss_pred hcCCC-CccccccCCCCHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccc-----eEEEE
Q 017633 229 VAPAG-PMYQAGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-----MFGFF 301 (368)
Q Consensus 229 ~~~~~-~~~~~~t~~~~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~~ 301 (368)
++... ....+...+ +.+. +..++..++.+ ....++..+++.++++.|++. +... .++... ++.+.
T Consensus 267 l~~~~~~~~~g~~~~-~~~~~a~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~----g~~V-~p~~~~~~~~~i~~i~ 338 (427)
T 3i16_A 267 TSYRLTVPGIGGECG-STFGVVRSMYQGLFLA--PHISMEALKGAILCSRIMELA----GFEV-MPKYDEKRSDIIQSIK 338 (427)
T ss_dssp HHHHHSCTTTGGGCC-CCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT----TCEE-ESCTTSCCSSSCEEEE
T ss_pred HHHhcccCccCccCC-ccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhC----CCee-cCCCCCCCccEEEEEE
Confidence 76310 111111111 1122 34444444433 345667777777777777764 3322 222333 66666
Q ss_pred eecCCCcccchhcccccHHHHHHHHHHHHc
Q 017633 302 FTEGPVYNFEDAKKSETTKFARFYRGMLEE 331 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (368)
+. +.....+|++.|...
T Consensus 339 l~-------------~~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 339 FN-------------DKDKLIEFCKGIQTG 355 (427)
T ss_dssp CS-------------SHHHHHHHHHHHHHT
T ss_pred EC-------------CHHHHHHHHHHHhhc
Confidence 52 345567899999876
No 222
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.80 E-value=3.7e-17 Score=152.85 Aligned_cols=299 Identities=10% Similarity=-0.013 Sum_probs=173.4
Q ss_pred hhHHHHHHHHHhhCC-CC----------CeEEEeCChHHHHHHHHHHHHHhc-------C---------CceEEEEcCCC
Q 017633 33 LLENVLAEMVISAVP-SI----------EMVRFVNSGTEACMGVLRLARAFT-------G---------RERIIKFEGCY 85 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~~----------~~v~~~~~gt~a~~~al~~~~~~~-------~---------~~~vi~~~~~~ 85 (368)
+.+.++.+++++.++ +. ...++++|||+|+..++.+++... + ...+++.+...
T Consensus 118 ~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~ 197 (481)
T 4e1o_A 118 ELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQA 197 (481)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTS
T ss_pred HHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcc
Confidence 456666667777765 21 267899999999999998776421 0 12344555566
Q ss_pred CCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---CCeEEEEEcccCCCCCcccCCHHH
Q 017633 86 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDF 162 (368)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~ 162 (368)
|.+...+....+..+...+... .+.. |+++|++++++.. ..+.++++...++++|.+.+
T Consensus 198 H~s~~~~~~~~g~~~~~v~~~~-~~~~-------------d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---- 259 (481)
T 4e1o_A 198 HSSVEKAGLISLVKMKFLPVDD-NFSL-------------RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---- 259 (481)
T ss_dssp CHHHHHHHHHHTCEEEEECCCT-TSCC-------------CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----
T ss_pred hHHHHHHHHhCCCceEEEEcCC-CCcC-------------CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----
Confidence 6666655556555443322211 1111 8999999997521 12566666666666788777
Q ss_pred HHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchh--hhhhhccCCccceeeeeh-HHHHH-HhcCCCCcc
Q 017633 163 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGR-RDIME-MVAPAGPMY 236 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~iG~v~~~-~~~~~-~~~~~~~~~ 236 (368)
+++|+++|++||+++++|++|.+. .....+.....++ ..|.+ +.+|++++...+|+++++ +.... .+.....+.
T Consensus 260 l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 260 LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhc
Confidence 999999999999999999999654 2221111111232 23544 457999977788888664 44433 222111111
Q ss_pred cc---------------ccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceE
Q 017633 237 QA---------------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 298 (368)
Q Consensus 237 ~~---------------~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 298 (368)
.. .+.....+.+.+ +++.+.. +++.++..++++++++.|++. .++........+++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~---al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~g~~~~~~~~~~~v 413 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWF---VIRSFGVKNLQAHVRHGTEMAKYFESLVRND---PSFEIPAKRHLGLV 413 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---TTEECCSCCCSSEE
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCceeEE
Confidence 10 011112333444 3333322 234455566666666666542 12221122334566
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCee-ecCC---CCCccccc---cCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPS---QFEAGFTS---LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-~~~~---~~~~~~~~---~~~~~~~i~~~~~~l~~~l~~ 367 (368)
++.+.. ......++.+.|.++|+. +.+. +...+|++ ..++++|+++++++|++++++
T Consensus 414 ~f~~~~------------~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 414 VFRLKG------------PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp EEEESS------------CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCC------------chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 666531 223457899999999844 4432 22334443 445899999999999998764
No 223
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.80 E-value=1.3e-17 Score=156.57 Aligned_cols=318 Identities=12% Similarity=-0.019 Sum_probs=174.7
Q ss_pred HHHHHHHHHHcCCCCCCC----ChhHHHHHHHHHhhCC-CC---------CeEEEeCChHHHHHHHHHHHHHh--c----
Q 017633 14 VLAALGETMKKGTSFGAP----CLLENVLAEMVISAVP-SI---------EMVRFVNSGTEACMGVLRLARAF--T---- 73 (368)
Q Consensus 14 v~~a~~~~~~~~~~~~~~----~~~~~~l~~~l~~~~~-~~---------~~v~~~~~gt~a~~~al~~~~~~--~---- 73 (368)
+.+.+..++......+.. .+.+.++.+++++.++ +. ..+++|+|||+|+..++..++.. .
T Consensus 90 ~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~ 169 (486)
T 1js3_A 90 LADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQA 169 (486)
T ss_dssp HHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhc
Confidence 555555555332211111 2455567777788876 32 46899999999999999766432 1
Q ss_pred --CC-------ce-EEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCC---CC
Q 017633 74 --GR-------ER-IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GE 140 (368)
Q Consensus 74 --~~-------~~-vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~---~~ 140 (368)
+. ++ +++.+...|.....+....|.++...+.. ..+.. |+++|++++++.. ..
T Consensus 170 ~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d-~~~~~-------------d~~~L~~~i~~~~~~g~~ 235 (486)
T 1js3_A 170 ASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD-GKFAM-------------RASALQEALERDKAAGLI 235 (486)
T ss_dssp HSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC-TTSCC-------------CHHHHHHHHHHHHHTTCE
T ss_pred cCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC-CCCCC-------------CHHHHHHHHHHHHhCCCC
Confidence 21 23 34444444544455555555544332221 11111 8999999997421 11
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchh--hhhhhccCCccc
Q 017633 141 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPV 216 (368)
Q Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~i 216 (368)
+.++++...++++|.+.+ +++|+++|++||+++++|++|.++ .....+.....++ ..|.+ +.+|.+++++++
T Consensus 236 p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~ 311 (486)
T 1js3_A 236 PFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDC 311 (486)
T ss_dssp EEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred ceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcce
Confidence 235555555566777776 999999999999999999999764 2211111100111 23543 467999877899
Q ss_pred eeeeehH-HH-HHHhcCCCCcccc-----------------ccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHH
Q 017633 217 GAYGGRR-DI-MEMVAPAGPMYQA-----------------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGEL 274 (368)
Q Consensus 217 G~v~~~~-~~-~~~~~~~~~~~~~-----------------~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l 274 (368)
|++++++ .. .+.+.....+... .+.....+.+.+++ +.+.. +++.++..++++++
T Consensus 312 G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al---~~~g~~g~~~~~~~~~~~a~~l 388 (486)
T 1js3_A 312 SAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVF---RMYGVKGLQAYIRKHVQLSHEF 388 (486)
T ss_dssp EEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHH
Confidence 9998854 33 4444211111100 01112334444433 33322 23345555666666
Q ss_pred HHHHHHHHHhcCCceEEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCC----CCCccccc---c
Q 017633 275 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----QFEAGFTS---L 347 (368)
Q Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~~~~~---~ 347 (368)
.+.|++. .++.........++.+.+.. ......++.+.|.++|+.+... +...+|++ .
T Consensus 389 ~~~L~~~---~~~~~~~~~~~~~v~f~~~~------------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 453 (486)
T 1js3_A 389 EAFVLQD---PRFEVCAEVTLGLVCFRLKG------------SDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSR 453 (486)
T ss_dssp HHHHHHC---TTEEECSCCCSSEEEEEESS------------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred HHHHhcC---CCeEEeCCCceeEEEEEecC------------hHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCC
Confidence 6666552 12211111233444554321 1122478899999898664332 22334443 3
Q ss_pred CCCHHHHHHHHHHHHHHHhh
Q 017633 348 AHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 348 ~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+++++++++++|++++.+
T Consensus 454 ~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 454 KVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 35899999999999988754
No 224
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.80 E-value=6.3e-19 Score=161.23 Aligned_cols=304 Identities=9% Similarity=-0.047 Sum_probs=175.9
Q ss_pred CcHHHHHHHHHHHHcCCC--CCCCC--hhHHHHHHHHHhhCC-C-CCeEEE-eCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKKGTS--FGAPC--LLENVLAEMVISAVP-S-IEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~--~~~~~--~~~~~l~~~l~~~~~-~-~~~v~~-~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.+|++++++.++...... +.++. +...+++++++++++ + .+++++ ++||++|+..+++.+. .++ ++++.
T Consensus 51 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~--~~g--v~~v~ 126 (398)
T 2fyf_A 51 VRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI--DKR--SLHLT 126 (398)
T ss_dssp CCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC--SSC--EEEEE
T ss_pred CCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc--CCC--eEEEe
Confidence 456788888663111111 22222 356789999999997 4 468998 9999999999998662 233 33334
Q ss_pred CCCCCCchh-hhhhc--CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCC
Q 017633 83 GCYHGHADP-FLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 159 (368)
Q Consensus 83 ~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (368)
..+|+.... ..... |..+.....+ .+.. .+. + ++ ++++++++.+.++++|.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~------------~~~-~----i~---~~~~~v~~~~~~nptG~~~~- 183 (398)
T 2fyf_A 127 YGEFSAKFASAVSKNPFVGEPIIITSD--PGSA------------PEP-Q----TD---PSVDVIAWAHNETSTGVAVA- 183 (398)
T ss_dssp CSHHHHHHHHHHHHCTTSCCCEEEECC--TTCC------------CCC-C----CC---TTCSEEEEESEETTTTEECC-
T ss_pred CCHHHHHHHHHHHHhCCCCceEEEecC--CCCC------------CCc-c----cc---CCCCEEEEeCcCCCcceecc-
Confidence 444432111 11211 2222211111 1110 011 0 22 35677777777777888888
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcch--hhhhhhccCCccceeeeehHHHHHHhcCC-----
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPA----- 232 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di--~s~sK~~~~G~~iG~v~~~~~~~~~~~~~----- 232 (368)
+++|.++ +|+++|+||+|+.+. ...... + +|+ .++||.++++-++||+++++++++.++..
T Consensus 184 ---~~~i~~~---~~~~vivD~a~~~~~--~~~~~~--~--~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~ 251 (398)
T 2fyf_A 184 ---VRRPEGS---DDALVVIDATSGAGG--LPVDIA--E--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGR 251 (398)
T ss_dssp ---CCCCTTC---C-CEEEEECTTTTTT--SCCCGG--G--CSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTC
T ss_pred ---hHHhhhh---cCCeEEEEeccccCC--cccCcc--c--CcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCC
Confidence 5555555 899999999997441 111111 1 354 46789999543699999998887766310
Q ss_pred --CCcc-----------ccccCCCCHHHHHHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHHHHHhcCCceEE--e-
Q 017633 233 --GPMY-----------QAGTLSGNPLAMTAGIHTLKRLKEPG----TYEYLNKITGELTQGIIDAGKKAGHAICG--G- 292 (368)
Q Consensus 233 --~~~~-----------~~~t~~~~~~~~~a~~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~- 292 (368)
..+. .....+.+..+++++.++++.+.+.+ +.++++++++++++.|++. . ++.... +
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~~~ 328 (398)
T 2fyf_A 252 WVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER-P--YTTPFVTDPG 328 (398)
T ss_dssp CCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS-T--TEEESCCSGG
T ss_pred CCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc-C--CceeccCChh
Confidence 0000 01123456677777778887664433 3444555555555555442 0 221111 1
Q ss_pred eccc-eEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCC----CCcccccc--CCCHHHHHHHHHHHHHHH
Q 017633 293 YISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSL--AHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 293 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~~~~~~--~~~~~~i~~~~~~l~~~l 365 (368)
..++ ++++.+. +..+..++.+.|.++||.++++. ...+|+++ .++++|+++++++|++++
T Consensus 329 ~~~~~~~~~~~~-------------~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l 395 (398)
T 2fyf_A 329 LRSQVVGTIDFV-------------DDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVV 395 (398)
T ss_dssp GBCSSEEEEEEC-------------TTSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECC-------------CCCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 1234 6777662 11235789999999999998752 23456544 469999999999999998
Q ss_pred hhC
Q 017633 366 RQI 368 (368)
Q Consensus 366 ~~~ 368 (368)
+++
T Consensus 396 ~~~ 398 (398)
T 2fyf_A 396 ERL 398 (398)
T ss_dssp HTC
T ss_pred HhC
Confidence 764
No 225
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.80 E-value=1.1e-17 Score=155.93 Aligned_cols=301 Identities=10% Similarity=0.005 Sum_probs=172.8
Q ss_pred hhHHHHHHHHHhhCCCC----------CeEEEeCChHHHHHHHHHHHHHhc-------C---------CceEEEEcCCCC
Q 017633 33 LLENVLAEMVISAVPSI----------EMVRFVNSGTEACMGVLRLARAFT-------G---------RERIIKFEGCYH 86 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~----------~~v~~~~~gt~a~~~al~~~~~~~-------~---------~~~vi~~~~~~~ 86 (368)
+.+.++.+++++.++-+ ...++++|||+|+..++..++... + .+.+++.+...|
T Consensus 113 ~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H 192 (475)
T 3k40_A 113 ELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH 192 (475)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC
T ss_pred HHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch
Confidence 45666777778887622 268999999999999997775321 1 123455555666
Q ss_pred CCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHH
Q 017633 87 GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFL 163 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l 163 (368)
.+...+....|..+...+... .+ . |+++|++++++. ...+.++++...++++|.+.+ +
T Consensus 193 ~s~~~~~~~~g~~~~~v~~d~-~~-~-------------d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~----l 253 (475)
T 3k40_A 193 SSVERAGLLGGVKLRSVQSEN-HR-M-------------RGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY----L 253 (475)
T ss_dssp HHHHHHHHHHTCEEEEECCBT-TB-C-------------CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----H
T ss_pred HHHHHHHHHcCCceEEEECCC-CC-c-------------CHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC----H
Confidence 666666666665443332221 12 2 899999999852 112566666666666788877 9
Q ss_pred HHHHHHHHHhCCEEEEehhhhch-hcccCccccccCC-Ccchh--hhhhhccCCccceeeeehH-HH-HHHhcCCCCccc
Q 017633 164 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGRR-DI-MEMVAPAGPMYQ 237 (368)
Q Consensus 164 ~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~iG~v~~~~-~~-~~~~~~~~~~~~ 237 (368)
++|+++|++||+++++|++|.+. .....+.....++ ..|.+ +.+|++++...+|++++++ .. .+.+.....+..
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~ 333 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLK 333 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC------------
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccC
Confidence 99999999999999999999653 2211111111122 23554 4569998777888887654 32 222221111110
Q ss_pred cc-----------cCCCC-HHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeeccceEEEEe
Q 017633 238 AG-----------TLSGN-PLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 302 (368)
Q Consensus 238 ~~-----------t~~~~-~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (368)
.. +...+ ........++++.+.. +++.++..++++++++.|++. .++........+++.+.+
T Consensus 334 ~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~g~~l~~~~~~~iv~f~~ 410 (475)
T 3k40_A 334 HDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD---SRFELAAEINMGLVCFRL 410 (475)
T ss_dssp ---------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TTEEESSCCBTTEEEEEE
T ss_pred CCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEecCCceEEEEEEe
Confidence 00 00011 1122333344444433 334556666666666666553 122211223345666665
Q ss_pred ecCCCcccchhcccccHHHHHHHHHHHHcCeee-cCC---CCCccccc---cCCCHHHHHHHHHHHHHHHhh
Q 017633 303 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF-APS---QFEAGFTS---LAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~---~~~~~~~~---~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.. ......++.+.|.++|..+ .+. +...+|++ ..++++|+++++++|++++++
T Consensus 411 ~~------------~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 411 KG------------SNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp SS------------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC------------chHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 31 2234578999999988654 332 22344543 345899999999999998764
No 226
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.79 E-value=1.4e-16 Score=149.81 Aligned_cols=311 Identities=14% Similarity=0.048 Sum_probs=174.2
Q ss_pred hhHHHHHHHHHhhCC-C--CCeEEEeCChHHHHHHHHHHHHHhc-------C----CceEEEEcCCCCCCchhhhhhcCC
Q 017633 33 LLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAFT-------G----RERIIKFEGCYHGHADPFLVKAGS 98 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~--~~~v~~~~~gt~a~~~al~~~~~~~-------~----~~~vi~~~~~~~~~~~~~~~~~~~ 98 (368)
+.+.++.+++++.++ + .+.+++++|||+|+..++..++... + .+.+|+.+...|.+...+....|.
T Consensus 135 ~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~ 214 (511)
T 3vp6_A 135 LMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 214 (511)
T ss_dssp HHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCC
Confidence 345666667777776 3 4689999999999999997775421 1 233444455566655555555554
Q ss_pred C---ccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 017633 99 G---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE 172 (368)
Q Consensus 99 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~ 172 (368)
+ +....... .+.. |+++|++++++. ...++++++...++++|.+.+ +++|+++|++
T Consensus 215 g~~~~~~v~~d~-~~~~-------------d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~ 276 (511)
T 3vp6_A 215 GTDNVILIKCNE-RGKI-------------IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEK 276 (511)
T ss_dssp CGGGEEEECBCT-TSCB-------------CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHH
T ss_pred CCCcEEEeecCC-CCcc-------------CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc----HHHHHHHHHH
Confidence 2 22211111 1111 899999999752 122778888777777888877 9999999999
Q ss_pred hCCEEEEehhhhch-hcccCccccccCC-Ccchh--hhhhhccCCccceeeeeh-HHHHHHh-cCCCCccccc-------
Q 017633 173 NGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGR-RDIMEMV-APAGPMYQAG------- 239 (368)
Q Consensus 173 ~~~~li~De~~~~~-~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~iG~v~~~-~~~~~~~-~~~~~~~~~~------- 239 (368)
||+++++|++|.+. .....+.....+. ..|.+ +.+|+++++..+|+++++ +.+.+.. .....+....
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 356 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVS 356 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGG
T ss_pred cCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccc
Confidence 99999999999754 2211111111122 23544 567999877788988764 4444433 2111111000
Q ss_pred ----------cCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhcCCceEE--eeccceEEEEeec
Q 017633 240 ----------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICG--GYISGMFGFFFTE 304 (368)
Q Consensus 240 ----------t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~ 304 (368)
+.....+.+.+ +++.+.. +++.++..++++++++.|++. .++.... ....+++.+.+.+
T Consensus 357 ~~~~~~~~~~~r~~~al~~~~---al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~---pg~~l~~~~~p~~~~v~f~~~p 430 (511)
T 3vp6_A 357 YDTGDKAIQCGRHVDIFKFWL---MWKAKGTVGFENQINKCLELAEYLYAKIKNR---EEFEMVFNGEPEHTNVCFWYIP 430 (511)
T ss_dssp GCCGGGSSCSSCCCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---TTEEESSSSCCSSSCEEEEECC
T ss_pred cCccCCCCCCCCchHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEEecCCCCeEEEEEEEeC
Confidence 00122333333 4443332 334556666666666666542 1222111 2334455555432
Q ss_pred CCCcccchh---cccccHHHHHHHHHHHHcCeeecC-----CCCCcccc---ccCCCHHHHHHHHHHHHHHHhh
Q 017633 305 GPVYNFEDA---KKSETTKFARFYRGMLEEGVYFAP-----SQFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 305 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gi~~~~-----~~~~~~~~---~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
...+..... .........++.+.|.++|+.+.. ++...+|+ +..++++|++++++.|++..+.
T Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 431 QSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp GGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 211100000 000001234788999999965433 11123443 4567999999999999987643
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.73 E-value=6.3e-17 Score=145.11 Aligned_cols=319 Identities=14% Similarity=0.045 Sum_probs=186.0
Q ss_pred CCCcHHHHHHHHHHHHcCCC---------CCC--CChhHHHHHHHHHhhCC-C-CCeEEE-eCChHHHHHHHHHHHHHhc
Q 017633 8 FPSYLQVLAALGETMKKGTS---------FGA--PCLLENVLAEMVISAVP-S-IEMVRF-VNSGTEACMGVLRLARAFT 73 (368)
Q Consensus 8 g~~~~~v~~a~~~~~~~~~~---------~~~--~~~~~~~l~~~l~~~~~-~-~~~v~~-~~~gt~a~~~al~~~~~~~ 73 (368)
+.-+|+|++++.+.+.+... +.. ..+..++.++.++++++ + .++++| +.|||++++.++.-+....
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~ 101 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLK 101 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGS
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCC
Confidence 34788999999988764211 100 12456788888999887 3 367888 5899999999997653322
Q ss_pred CCceEEEEcCCCCCCchhhhhhc-CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCC
Q 017633 74 GRERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 152 (368)
Q Consensus 74 ~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~ 152 (368)
++|++++...+.++... .... ..+.....++..... .. ++++++..++ ++++++.+..+.+.
T Consensus 102 ~Gd~v~~~~~g~~~~~~--~~~a~~~G~~~~~~~~~~~~---------~~---~~~~~~~~i~---~~t~lV~~~h~et~ 164 (377)
T 3e77_A 102 AGRCADYVVTGAWSAKA--AEEAKKFGTINIVHPKLGSY---------TK---IPDPSTWNLN---PDASYVYYCANETV 164 (377)
T ss_dssp TTCEEEECCCSHHHHHH--HHHHTTTSEEEECSCCCSSS---------CS---CCCGGGCCCC---TTCSCEEEESEETT
T ss_pred CCCeEEEEECCHHHHHH--HHHHHHhCCceEEeccCCCc---------CC---CCChHHhccC---CCccEEEEeCccCc
Confidence 36787776665655422 2221 112111111111000 00 3344443343 46777777676666
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 153 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 153 ~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
+|.+.| + +|+++|+++++|-+++ .|. ...++.+++ .+.+--|.+| +.++|++++++++.+.+..
T Consensus 165 tG~~~p----i-----i~~~~~~~~~vD~~q~---~g~~~id~~~~~~--~~~s~~K~~g-p~G~g~l~~~~~~l~~~~~ 229 (377)
T 3e77_A 165 HGVEFD----F-----IPDVKGAVLVCDMSSN---FLSKPVDVSKFGV--IFAGAQKNVG-SAGVTVVIVRDDLLGFALR 229 (377)
T ss_dssp TTEECS----S-----CCCCTTCCEEEECTTT---TTSSCCCGGGCSE--EEEEGGGTTS-CTTCEEEEEETTSCSCCCT
T ss_pred hheEch----h-----hhccCCCEEEEEcccc---cCCCCCchhhcCE--EEEecccccC-CCccEEEEEcHHHHhhccC
Confidence 898888 5 4788999999999996 232 344555552 3344559995 5568888888776544432
Q ss_pred CCCccc--------ccc-CCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEE---eec-cce
Q 017633 232 AGPMYQ--------AGT-LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICG---GYI-SGM 297 (368)
Q Consensus 232 ~~~~~~--------~~t-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~---~~~-~~~ 297 (368)
..+.+. ..+ .+++....+++.++++.+.+.+=.+.+.++.+.+.+.+.+.+.+. ++.... ... +..
T Consensus 230 ~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~i 309 (377)
T 3e77_A 230 ECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMN 309 (377)
T ss_dssp TSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSE
T ss_pred CCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcE
Confidence 111100 112 255677777888899988665223444555555555555544444 222111 112 223
Q ss_pred EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 298 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
+.|.+.... ++.+....+.+.|.++||.+.++.. ..+|+ ...++++|++++++.|++++++
T Consensus 310 vsf~~~~~~---------~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 310 IPFRIGNAK---------GDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EEEEESSTT---------CCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC---------CchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 555553210 0112224677888899999987632 23444 4667999999999999998764
No 228
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.72 E-value=1.2e-16 Score=154.69 Aligned_cols=315 Identities=10% Similarity=-0.053 Sum_probs=175.6
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
.+.....++++.+++.++....+++++|+++++..++..+ ..++|.|++..+.|.....+.+...|..+...... ..
T Consensus 170 ~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al--~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~-~~ 246 (730)
T 1c4k_A 170 IHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSAL--VSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTN-RN 246 (730)
T ss_dssp TTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEE-EC
T ss_pred CChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh--cCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCC-cc
Confidence 3456788999999999985556777776678998888766 34678888877665443332144444432211110 00
Q ss_pred CCCCCCCCcccccCCCCHHHH-----HHHHHcCCCC---e----EE-EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCE
Q 017633 110 GVPKGATYETLTAPFNDVSAL-----ENLFENNKGE---I----AA-IILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 176 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~d~~~l-----e~~~~~~~~~---~----~~-~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~ 176 (368)
.+ +. ...+ |+++| ++++++++++ + ++ ++++|+ .+|.+.+ +++|+++|++||++
T Consensus 247 ~~----~i-~g~i---d~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn--~~G~v~d----l~~I~~la~~~g~~ 312 (730)
T 1c4k_A 247 PY----GF-IGGI---YDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT--YDGTIYN----AHEVVKRIGHLCDY 312 (730)
T ss_dssp TT----CC-EEEE---CGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC--TTSEEEC----HHHHHHHHGGGBSE
T ss_pred cc----Cc-cCCC---CHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC--CCCeecC----HHHHHHHHHHcCCe
Confidence 00 00 0001 55555 8888753101 2 44 444442 4788887 99999999999999
Q ss_pred EEEehhhhc-hhccc------CccccccCCC----cchhhhhhhccCCccc-eeeeehHHHH---------HHhcCCCCc
Q 017633 177 LIFDEVMTG-FRLAY------GGAQEYFGVT----PDLTTLGKIIGGGLPV-GAYGGRRDIM---------EMVAPAGPM 235 (368)
Q Consensus 177 li~De~~~~-~~~g~------~~~~~~~~~~----~di~s~sK~~~~G~~i-G~v~~~~~~~---------~~~~~~~~~ 235 (368)
|++||+|.. +..+. ....+.++.. .-+.|++|+++ |++. |+++++++.+ ..+.. ..
T Consensus 313 livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~-g~~~gg~I~v~~~~l~g~~~~i~~~~~~~--~~ 389 (730)
T 1c4k_A 313 IEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA-GFSQTSQIHKKDSHIKGQLRYCDHKHFNN--SF 389 (730)
T ss_dssp EEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS-CCTTCEEEEEECGGGTTSTTCCCHHHHHH--HH
T ss_pred EEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC-CCCCEEEEEecchhhcCcccccCHHHHHH--HH
Confidence 999999953 21111 1111123432 22357899975 4444 4554433211 11110 01
Q ss_pred cccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHH-H-HHhcCCceEE-------------------
Q 017633 236 YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIID-A-GKKAGHAICG------------------- 291 (368)
Q Consensus 236 ~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~~~~------------------- 291 (368)
....+.+++...+++..++++.+.. .++.++..++.+++++.|++ + ....-.+...
T Consensus 390 ~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~ 469 (730)
T 1c4k_A 390 NLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDY 469 (730)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGG
T ss_pred HHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchh
Confidence 1223346677777777777776653 34677788888888888876 2 1010000000
Q ss_pred ------------ee--ccc-e-----EEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--cccCC
Q 017633 292 ------------GY--ISG-M-----FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAH 349 (368)
Q Consensus 292 ------------~~--~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~ 349 (368)
.+ .+. + +.+.. +.+..........+..+.+++++|.++||.+...+...++ ++...
T Consensus 470 ~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~--pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~ 547 (730)
T 1c4k_A 470 WRFEKGAKWHAYEGYGDNQYYVDPNKFMLTT--PGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAE 547 (730)
T ss_dssp GBCCTTCTTTCCTTCCTTCEEECTTEEEEEC--SSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTC
T ss_pred hccCccchhccccccCCcccccCCeEEEEEe--CCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCC
Confidence 00 000 0 12221 0000000000001223578999999999999876544444 46777
Q ss_pred CHHHHHHHHHHHHHHHh
Q 017633 350 SSDDIQHTITAAEKVLR 366 (368)
Q Consensus 350 ~~~~i~~~~~~l~~~l~ 366 (368)
+++++++++++|+++.+
T Consensus 548 t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 548 TPAKMNNLITQLLQLQR 564 (730)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.71 E-value=1.1e-16 Score=156.27 Aligned_cols=315 Identities=8% Similarity=-0.054 Sum_probs=182.6
Q ss_pred CChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCC
Q 017633 31 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 110 (368)
Q Consensus 31 ~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (368)
+.....++++.+++.++..+.+++++|+++++..++..+ ..++|.|++..+.|+... ..+...|..+....... ..
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al--~~~GD~Vlv~~~~h~s~~-~~~~~~G~~~v~v~~~~-~~ 278 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQAC--MTDNDVVVVDRNCHKSIE-QGLMLTGAKPVYMVPSR-NR 278 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHH--CCTTCEEEEESSCCHHHH-HHHHHHCCEEEEECCCB-CT
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHh--cCCCCEEEECCCchHHHH-HHHHHcCCEEEEEeCCC-Cc
Confidence 456678888999998875566777776678899888766 356788888777655443 33444454432211110 00
Q ss_pred CCCCCCCcccccC--CCCHHHHHHHHHcCCCCe--------EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 111 VPKGATYETLTAP--FNDVSALENLFENNKGEI--------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 111 ~~~~~~~~~~~~~--~~d~~~le~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+ +. .-.++ .-|+++++++++++++.. .+++++| +.+|.+.+ +++|+++|++||++|++|
T Consensus 279 ~----g~-~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p--n~~G~v~d----l~~I~~ia~~~~~~livD 347 (755)
T 2vyc_A 279 Y----GI-IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC--TYDGVCYN----AKEAQDLLEKTSDRLHFD 347 (755)
T ss_dssp T----SC-BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS--CTTSEEEC----HHHHHHHHTTTCSEEEEE
T ss_pred c----cc-ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC--CCCceecC----HHHHHHHHHHcCCEEEEE
Confidence 0 00 00000 017999999998642221 3455554 34788887 999999999999999999
Q ss_pred hhhhch-hcccCc-cccc-cC--CCc------chhhhhhhccCCcc-ceeeeehHH--HH--HHhcCCCCccccccCCCC
Q 017633 181 EVMTGF-RLAYGG-AQEY-FG--VTP------DLTTLGKIIGGGLP-VGAYGGRRD--IM--EMVAPAGPMYQAGTLSGN 244 (368)
Q Consensus 181 e~~~~~-~~g~~~-~~~~-~~--~~~------di~s~sK~~~~G~~-iG~v~~~~~--~~--~~~~~~~~~~~~~t~~~~ 244 (368)
|+|.+. ..+..+ .... .+ .+. -+.|++|+++ |++ .|+++++++ .+ ..+.. ......+.+++
T Consensus 348 eA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~-g~~~g~~i~~~~~~~~i~~~~~~~--~~~~~~s~sp~ 424 (755)
T 2vyc_A 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN-ALSQASYIHVREGRGAINFSRFNQ--AYMMHATTSPL 424 (755)
T ss_dssp CTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS-CCTTCEEEEEECCBTCCCHHHHHH--HHHHTSCSSCC
T ss_pred CcCchhcccCcccCCcchhcCCcCCccCCCeEEEECcccccc-CcCCeeeeeecCcccccCHHHHHH--HHHHhCCCCHH
Confidence 999643 222110 0111 22 111 2347889876 444 566666433 11 11110 01122334677
Q ss_pred HHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHHHHHh--------cC--CceEEee------------------
Q 017633 245 PLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKK--------AG--HAICGGY------------------ 293 (368)
Q Consensus 245 ~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~--------~~--~~~~~~~------------------ 293 (368)
.+.+++..++++.+..+ ++.++..++.++++++|+++... .. .+.....
T Consensus 425 ~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (755)
T 2vyc_A 425 YAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLT 504 (755)
T ss_dssp HHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhcc
Confidence 88888888888877543 47888999999999999886431 00 0001100
Q ss_pred ---------------------cc------ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCCCccc--
Q 017633 294 ---------------------IS------GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF-- 344 (368)
Q Consensus 294 ---------------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~-- 344 (368)
.+ ..+.+.+....... .....+..+.++.++|.++||.+...+...++
T Consensus 505 ~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G---~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~ 581 (755)
T 2vyc_A 505 TVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDG---ELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFL 581 (755)
T ss_dssp HCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTS---SBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEE
T ss_pred chhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCC---CccccCCcHHHHHHHHHHCCCEEeecCCCeEEEE
Confidence 00 11122221000000 00000223478889998999998765544443
Q ss_pred cccCCCHHHHHHHHHHHHHHHh
Q 017633 345 TSLAHSSDDIQHTITAAEKVLR 366 (368)
Q Consensus 345 ~~~~~~~~~i~~~~~~l~~~l~ 366 (368)
++...+++++++++++|+++.+
T Consensus 582 ~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 582 FSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp CCTTCCTTTTHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHHH
Confidence 4667799999999999988753
No 230
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.70 E-value=4e-16 Score=144.33 Aligned_cols=284 Identities=17% Similarity=0.157 Sum_probs=154.6
Q ss_pred hhHHHHHHHHHhhCC-CCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhh---hcCCCccccCCCCC
Q 017633 33 LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDS 108 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~-~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 108 (368)
+...+++++++++++ +.+++++++|++.+.+.++..++ ..++++|++..+.|+........ ..|..+..... .
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~-~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~--~ 184 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR-ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL--E 184 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH-HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC--B
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh-cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC--c
Confidence 456788999999887 55567888888855555543332 35678888877666544322211 13433322211 1
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehh-h-hch
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV-M-TGF 186 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~-~-~~~ 186 (368)
.+.. |+++ ++ +++++++++.. +++|.+.+ +++|+++|++||+++|+|-. + .+.
T Consensus 185 ~~~~-------------d~~~----i~---~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~a~g~ 239 (438)
T 1wyu_A 185 GGRT-------------PLPE----VG---EEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPLSLGV 239 (438)
T ss_dssp TTBC-------------CCCC----CC---TTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTTGGGT
T ss_pred CCcc-------------CHHH----hC---CCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechhhccC
Confidence 1110 3332 33 46787777775 67888887 99999999999999996622 2 221
Q ss_pred hcccCccccccCCCcchhhh-hhhcc-----CCccceeeeehHHHHHHhcCCC----------C-c------------cc
Q 017633 187 RLAYGGAQEYFGVTPDLTTL-GKIIG-----GGLPVGAYGGRRDIMEMVAPAG----------P-M------------YQ 237 (368)
Q Consensus 187 ~~g~~~~~~~~~~~~di~s~-sK~~~-----~G~~iG~v~~~~~~~~~~~~~~----------~-~------------~~ 237 (368)
......++ +|++++ +|.|+ +|.++|++++++++++.+.... . + ..
T Consensus 240 ----~~~~~~~g--~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~ 313 (438)
T 1wyu_A 240 ----LKPPGAYG--ADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA 313 (438)
T ss_dssp ----BCCHHHHT--CSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG
T ss_pred ----cCCCccCC--CCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchh
Confidence 11112233 465544 46532 4568999999988777653210 0 0 00
Q ss_pred cccCCC---CHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeccceEEEEeecCCCcccchh
Q 017633 238 AGTLSG---NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDA 313 (368)
Q Consensus 238 ~~t~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
..++.. +.+.+..+...+..+.+++ .+++.++...+++.+.+.+.+. ++.. ......+..+.+..
T Consensus 314 ~~t~~~~~~~~~~a~~aa~~l~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~~~~~~~--------- 382 (438)
T 1wyu_A 314 KAKSNITTNAQLTALMGAMYLAALGPEG-LREVALKSVEMAHKLHALLLEVPGVRP-FTPKPFFNEFALAL--------- 382 (438)
T ss_dssp GSSCCCCSCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTSTTCEE-CSCSSBCSEEEEEC---------
T ss_pred cccCCccchHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEE-CCCCCeEEEEEEeC---------
Confidence 122222 2222222222244343222 2233333333444444433333 3321 11112222233321
Q ss_pred cccccHHHHHHHHHHHHcCeee--cCCC---CCccccc--cCCCHHHHHHHHHHHHHHH
Q 017633 314 KKSETTKFARFYRGMLEEGVYF--APSQ---FEAGFTS--LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 314 ~~~~~~~~~~~~~~l~~~Gi~~--~~~~---~~~~~~~--~~~~~~~i~~~~~~l~~~l 365 (368)
+.+..++.+.|.++||.+ .++. ...+|++ ..++++|+++++++|++++
T Consensus 383 ----~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 383 ----PKDPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp ----SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ----CCCHHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 112478999999999999 4442 3345554 4479999999999999875
No 231
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.67 E-value=6.6e-16 Score=148.42 Aligned_cols=313 Identities=8% Similarity=-0.039 Sum_probs=183.2
Q ss_pred CCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCC
Q 017633 30 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 109 (368)
Q Consensus 30 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (368)
.+.....++.+.++++++....+++++|++.|+..++..+ ..++|.|++... .|.+...++...|......... ..
T Consensus 192 ~~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al--~~pGD~VLv~r~-~H~S~~~~l~lsGa~pv~v~~~-~~ 267 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYS--APAGSTILIDRN-CHKSLTHLMMMSDVTPIYFRPT-RN 267 (715)
T ss_dssp TTBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHH--CCTTCEEEEESS-CCHHHHHHHHHSCCEEEEECCC-BC
T ss_pred CCcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHh--CCCCCEEEECCC-ccHHHHHHHHHcCCEEEEEecc-cc
Confidence 3567788999999999975455555554468888887665 356777777655 4455555566666543321111 01
Q ss_pred CCCCCCCCcccccCCC------CHHHHHHHHHcCCCCe---EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 110 GVPKGATYETLTAPFN------DVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 110 ~~~~~~~~~~~~~~~~------d~~~le~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
. +.++.+ |+++++++++++++.. .+++++| +.+|.+.+ +++|.++|++++ +++|
T Consensus 268 ~---------~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p--n~~G~v~d----l~~I~ela~~~~--livD 330 (715)
T 3n75_A 268 A---------YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS--TYDGLLYN----TDFIKKTLDVKS--IHFD 330 (715)
T ss_dssp T---------TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS--CTTSEEEC----HHHHHHHCCCSE--EEEE
T ss_pred c---------cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC--CCCCccCC----HHHHHHHhCcCc--EEEc
Confidence 1 111111 6999999998764322 3566666 56788888 999999998764 7999
Q ss_pred hhhhch-hcccCcc-ccc--cCCCcc-----hhhhhhhccCCccceeeeehHHH-HHHhcCCCCccccccCCCCHHHHHH
Q 017633 181 EVMTGF-RLAYGGA-QEY--FGVTPD-----LTTLGKIIGGGLPVGAYGGRRDI-MEMVAPAGPMYQAGTLSGNPLAMTA 250 (368)
Q Consensus 181 e~~~~~-~~g~~~~-~~~--~~~~~d-----i~s~sK~~~~G~~iG~v~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a 250 (368)
|+|... ..+..+. ... .+..+| +.|++|++++--..|++++++++ .+.+.. ......+.+++++.+++
T Consensus 331 EAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~--~~~~~~STSpsy~~~As 408 (715)
T 3n75_A 331 SAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE--AYMMHTTTSPHYGIVAS 408 (715)
T ss_dssp CTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHH--HHHHTSCSSCCHHHHHH
T ss_pred cccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHH--HHHhhcCCCchHHHHHH
Confidence 999532 2222111 111 121245 35789998642246777665432 111211 11223455788999999
Q ss_pred HHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHhc-CCc-eE-----EeeccceE----------------EEEeec
Q 017633 251 GIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHA-IC-----GGYISGMF----------------GFFFTE 304 (368)
Q Consensus 251 ~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~-~~~-~~-----~~~~~~~~----------------~~~~~~ 304 (368)
..++++.+.. +++++++.++.++++++|+++.... ++. .. +.....+. .+.+.+
T Consensus 409 ldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp 488 (715)
T 3n75_A 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (715)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECT
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCC
Confidence 9999988752 4578999999999999998874311 100 00 00000000 000111
Q ss_pred CC--Ccccchhccc----ccHHHHHHHHHHHHcCeeecCCCCCccc--cccCCCHHHHHHHHHHHHHHH
Q 017633 305 GP--VYNFEDAKKS----ETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 305 ~~--~~~~~~~~~~----~~~~~~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~~~~i~~~~~~l~~~l 365 (368)
.+ +......... .+..+.++.++|.++||.+.-.....+. ++...+++++++++++|.++-
T Consensus 489 ~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~ 557 (715)
T 3n75_A 489 IKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFK 557 (715)
T ss_dssp TEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 10 0000000000 0122467889999999999876544433 466779999999999988753
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.66 E-value=1.5e-16 Score=143.43 Aligned_cols=312 Identities=12% Similarity=0.006 Sum_probs=176.9
Q ss_pred CcHHHHHHHHHHHHcCCC---------C-C-CCChhHHHHHHHHHhhCC-C-CCeEEE-eCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGTS---------F-G-APCLLENVLAEMVISAVP-S-IEMVRF-VNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~---------~-~-~~~~~~~~l~~~l~~~~~-~-~~~v~~-~~~gt~a~~~al~~~~~~~~~ 75 (368)
-+|+|++++.+.+.+... + + ...+..++.++.++++++ + .++|+| ++|||++++.++.-. ..++
T Consensus 38 ~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l--~~~g 115 (386)
T 3qm2_A 38 LPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNL--LGDK 115 (386)
T ss_dssp CCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHH--CTTC
T ss_pred CCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc--cCCC
Confidence 578899999776643111 1 0 113456788889999887 3 357888 689999999999655 2456
Q ss_pred ceEEEEcCCCCCCchhhhhh-cCCCccccCCC-CCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCC
Q 017633 76 ERIIKFEGCYHGHADPFLVK-AGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 153 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~ 153 (368)
+++++...+.+++....... .| .+.....+ ...+. .+ ++++++.+++ ++++++.+..+.+.+
T Consensus 116 d~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~---------~~---~~~~~~~~l~---~~t~lV~~~h~et~t 179 (386)
T 3qm2_A 116 TTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGK---------RA---VKPMREWQLS---DNAAYLHYCPNETID 179 (386)
T ss_dssp CEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTE---------EE---ECCGGGCCCC---TTCSCEEECSEETTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCC---------CC---CchHHHhhcC---CCCcEEEEECCcCCc
Confidence 77776655555542211111 12 11111110 00110 00 3455555554 467777777777777
Q ss_pred Ccc-cCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhhhhccCCccceeeeehHHHHHHhcC
Q 017633 154 GFI-APKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 154 g~~-~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~sK~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
|.+ .| +++|. +|+++++|-+++ .|. ...++.++ .++.+--|.+| ..++|++++++++.+.+..
T Consensus 180 G~~i~p----i~~i~-----~g~~~~vDa~qs---~g~~pidv~~~~--~~~~s~hK~lG-P~G~g~l~v~~~~~~~~~~ 244 (386)
T 3qm2_A 180 GIAIDE----TPDFG-----PEVVVTADFSST---ILSAPLDVSRYG--VIYAGAQKNIG-PAGLTLVIVREDLLGKAHE 244 (386)
T ss_dssp TEECCC----CCCCC-----TTCCEEEECTTT---TTSSCCCGGGCS--EEEEETTTTTC-CTTEEEEEEEGGGCSCCCT
T ss_pred CEecCc----hhhhc-----CCCEEEEEcccc---cCCCCCCccccC--EEEEecccccC-CCccEEEEECHHHHhhhcc
Confidence 885 66 66664 899999999996 332 34455554 24445559995 5578999888877544432
Q ss_pred CCCcc--------ccc-cCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhcCCceE---Ee-eccceE
Q 017633 232 AGPMY--------QAG-TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC---GG-YISGMF 298 (368)
Q Consensus 232 ~~~~~--------~~~-t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~-~~~~~~ 298 (368)
..+.. ... ..++|..+.+++.++++.+.+.+=.+.+.++.+.+.+.+.+.+.+.++... .. .....+
T Consensus 245 ~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv 324 (386)
T 3qm2_A 245 SCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNV 324 (386)
T ss_dssp TSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEE
T ss_pred cCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEE
Confidence 11111 011 114466677777788887755422344555555555555554444443111 11 112345
Q ss_pred EEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 299 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
.+.+.. ...+ .++...|.++||.++.+.. ..+|+ ...++++|++++++.|+++.++
T Consensus 325 ~f~~~~------------~~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 325 PFQLAD------------NTLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EEEESS------------GGGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEECCC------------cccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 555421 1223 5677778899999987632 23454 4566999999999999998764
No 233
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.63 E-value=1.2e-14 Score=129.87 Aligned_cols=306 Identities=10% Similarity=-0.061 Sum_probs=177.0
Q ss_pred CcHHHHHHHHHHHHcCCC---------CCC--CChhHHHHHHHHHhhCC-C-CCeEEE-eCChHHHHHHHHHHHHHhcCC
Q 017633 10 SYLQVLAALGETMKKGTS---------FGA--PCLLENVLAEMVISAVP-S-IEMVRF-VNSGTEACMGVLRLARAFTGR 75 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~~~---------~~~--~~~~~~~l~~~l~~~~~-~-~~~v~~-~~~gt~a~~~al~~~~~~~~~ 75 (368)
-+|+|++++.+.+.+... +.. ..+..++.++.++++++ + .++|+| |+|||++++.++.-+. ++
T Consensus 16 ~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~---~~ 92 (361)
T 3m5u_A 16 LPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA---LN 92 (361)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC---CS
T ss_pred CcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC---CC
Confidence 568899999887753111 111 12567788888999887 3 457888 9999999999997652 34
Q ss_pred ceEEEEcCCCCCCchhhh-hhcCCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCC
Q 017633 76 ERIIKFEGCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 154 (368)
Q Consensus 76 ~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g 154 (368)
+++.....+.+++..... ...|..+.....+....+ .+ ++++ + ++ ++++++.+..+.+.+|
T Consensus 93 ~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~---------~~---~~~~-~--l~---~~t~lv~~~~~e~~tG 154 (361)
T 3m5u_A 93 GVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNF---------DH---IPRV-E--FS---DNADYAYICSNNTIYG 154 (361)
T ss_dssp SCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTS---------CS---CCCC-C--CC---TTSSEEEEESEETTTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCC---------Cc---CChh-h--cC---CCCCEEEEeCCCCCcc
Confidence 555333333444322211 111222222111111100 00 2222 2 44 3567777766666678
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEehhhhchhccc-CccccccCCCcchhhhh--hhccCCccceeeeehHHHHHHhcC
Q 017633 155 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAP 231 (368)
Q Consensus 155 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~g~-~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~~~~~~~~~~~ 231 (368)
.+.++ +++ +|+++++|.+++ .|. ...++. .|++++| |.+| ..++|++++++++.+.+..
T Consensus 155 ~~~~~---------i~~-~~~~~~vD~~q~---~g~~~id~~~----~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~~~ 216 (361)
T 3m5u_A 155 TQYQN---------YPK-TKTPLIVDASSD---FFSRKVDFSN----IALFYGGVQKNAG-ISGLSCIFIRKDMLERSKN 216 (361)
T ss_dssp EECSS---------CCC-CSSCEEEECGGG---TTSSCCCCTT----EEEEEEETTTTSS-CTTCEEEEEEHHHHHHHHT
T ss_pred eeCCc---------ccc-cCCEEEEEcccc---cCCCCCCccc----CCEEEEechhccC-CCccEEEEEcHHHHhhhcC
Confidence 77652 333 499999999996 222 222222 4666655 9995 5578999999888776643
Q ss_pred -CCCcc--------cccc-CCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHhcC-CceEE--e--ecc
Q 017633 232 -AGPMY--------QAGT-LSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAG-HAICG--G--YIS 295 (368)
Q Consensus 232 -~~~~~--------~~~t-~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~--~--~~~ 295 (368)
..+.. ...+ .++|..+.+++.++++.+.+. ++ +.+.++.+.+.+.+.+.+.+.+ +.... . ...
T Consensus 217 ~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~-~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~ 295 (361)
T 3m5u_A 217 KQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGL-DKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSL 295 (361)
T ss_dssp CCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCS
T ss_pred CCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCH-HHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCC
Confidence 11111 0112 345677788888999988765 43 4455555555555555544444 21111 1 112
Q ss_pred ceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecCCCC--Ccccc--ccCCCHHHHHHHHHHHHHHHhh
Q 017633 296 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--~~~~~--~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
..+.+.+... ...+ .++...|.++||.++.+.. ..+|+ ...++++|++++++.|+++.++
T Consensus 296 ~ivsf~~~~~-----------~~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 296 MNVSFNIAKN-----------KDLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp SEEEEEESSC-----------TTHH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCc-----------hhhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 3445554210 0122 4678889999999987632 23444 4566999999999999998764
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.62 E-value=4.5e-14 Score=126.49 Aligned_cols=290 Identities=12% Similarity=0.037 Sum_probs=165.3
Q ss_pred CCCeEEEeCChHHHHHHHHHHHHHhc--CCceEEEEcCCCCCCchhhhhhcCCCccccCCCCCCCCCCCCCCcccccCCC
Q 017633 48 SIEMVRFVNSGTEACMGVLRLARAFT--GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 125 (368)
Q Consensus 48 ~~~~v~~~~~gt~a~~~al~~~~~~~--~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (368)
.....++++++|.++..++..+.... +++.||+ +.+-|.+...++.+.|....+..-. .+. +...+
T Consensus 133 ~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIv-pRn~HKSv~kAliL~Gl~Pv~V~p~-~d~-------~~~~i--- 200 (501)
T 3hl2_A 133 TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIW-PRIDQKSCFKSMITAGFEPVVIENV-LEG-------DELRT--- 200 (501)
T ss_dssp TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEE-ECCCCHHHHHHHHHTTCEEEEECEE-EET-------TEEEE---
T ss_pred CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEE-ecchHHHHHHHHHHcCCeEEEEeee-ecc-------cccCC---
Confidence 45568888877777777776554431 3466666 8899999999998887754332110 000 00111
Q ss_pred CHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-hcccCccccccCCC-cc
Q 017633 126 DVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT-PD 202 (368)
Q Consensus 126 d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~-~~g~~~~~~~~~~~-~d 202 (368)
|++++|++|++++ +.+.+++..+.+.-++...+ +++|+++|++||+++++||||... .....+....+... .|
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 8999999999864 45556655554433334455 999999999999999999999433 21111111222232 67
Q ss_pred hhhhh--hhccCCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHH
Q 017633 203 LTTLG--KIIGGGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQ 276 (368)
Q Consensus 203 i~s~s--K~~~~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~ 276 (368)
+++.| |.+-..++.+.++. ++++++.+...-+ ++-+.+ ..+..+.++..+.. .++.++..++.+++++
T Consensus 277 ~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yP----Gr~S~S--psldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~ 350 (501)
T 3hl2_A 277 AFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYP----GRASAS--PSLDVLITLLSLGSNGYKKLLKERKEMFSYLSN 350 (501)
T ss_dssp EEEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSC----SCBCSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccceeecCceEEEeCCHHHHHHHHHhCC----CCCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666 77653333333333 5666666542111 111112 22222223333322 4467888899999999
Q ss_pred HHHHHHHhcCCce-EEeeccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcC---eeecCCCC------------
Q 017633 277 GIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG---VYFAPSQF------------ 340 (368)
Q Consensus 277 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G---i~~~~~~~------------ 340 (368)
.|+++....+... ..+....-+++.+.... . .......++-..|..++ -.+.+.+.
T Consensus 351 ~L~~la~~~ge~ll~~~~n~is~a~tl~~~~--~------~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~ 422 (501)
T 3hl2_A 351 QIKKLSEAYNERLLHTPHNPISLAMTLKTLD--E------HRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGF 422 (501)
T ss_dssp HHHHHHHTTTCCBCCCTTCSSEEEEECTTSC--T------TTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESST
T ss_pred HHHHHHHhcChhhcCCCCCceeEEEeccccc--c------cccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCc
Confidence 9999876555321 22111122333332210 0 11223456777777773 33322211
Q ss_pred C-------cccc----ccCCCHHHHHHHHHHHHHHHhh
Q 017633 341 E-------AGFT----SLAHSSDDIQHTITAAEKVLRQ 367 (368)
Q Consensus 341 ~-------~~~~----~~~~~~~~i~~~~~~l~~~l~~ 367 (368)
. .-++ ...++++|++.++++|++.+.+
T Consensus 423 g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~ 460 (501)
T 3hl2_A 423 MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKA 460 (501)
T ss_dssp TTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0 0011 3677999999999999999854
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.61 E-value=9.6e-14 Score=125.97 Aligned_cols=231 Identities=15% Similarity=0.055 Sum_probs=136.1
Q ss_pred hHHHHHHHHHhhCC--CCCeEEEeCChHHHHHHHH-HHHHHhc-CCceEEEEcCCCCCCchhhhhhcCCCccccCC-CCC
Q 017633 34 LENVLAEMVISAVP--SIEMVRFVNSGTEACMGVL-RLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDS 108 (368)
Q Consensus 34 ~~~~l~~~l~~~~~--~~~~v~~~~~gt~a~~~al-~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 108 (368)
....+..++.+.++ .....++++++|.+...++ ..++... +++.||+. ..-|.+...++.+.|.+...... +..
T Consensus 99 ~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~-r~aHkSv~kAl~l~Gl~p~~v~~~~~~ 177 (450)
T 3bc8_A 99 ITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWP-RIDQKSCFKSMVTAGFEPVVIENVLEG 177 (450)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEE-CCCCHHHHHHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEE-CCcHHHHHHHHHHcCCeeEEEEeeecC
Confidence 44466666666555 4456688888875555554 5554322 24555554 67999999888888775433211 000
Q ss_pred CCCCCCCCCcccccCCCCHHHHHHHHHcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhhhch-
Q 017633 109 PGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 186 (368)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~le~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~- 186 (368)
+ ...+ |+++|+++|++++ +.+.+++..|.+..+|..-+ +++|+++|++||++|++|++|...
T Consensus 178 ~---------~~~i---d~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~~Ia~ia~~~gi~l~VD~A~G~~~ 241 (450)
T 3bc8_A 178 D---------ELRT---DLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYDIPHVVNNAYGLQS 241 (450)
T ss_dssp T---------EEEC---CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTC
T ss_pred c---------cCCc---CHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HHHHHHHHHHCCCeEEEECCCchhh
Confidence 0 0111 8999999998764 46777888777665566666 999999999999999999999543
Q ss_pred hcccCccccccCC-Ccchhhhh--hhccCCccceeeee-hHHHHHHhcCCCCccccccCCCCHHHHHHHHHHHHHHccCC
Q 017633 187 RLAYGGAQEYFGV-TPDLTTLG--KIIGGGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 262 (368)
Q Consensus 187 ~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~iG~v~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~ 262 (368)
+.........+.. ..|++++| |.+......++++. +++..+.+.. .+.+ +-+.++ +.. ....+..+..+.
T Consensus 242 ~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g-~~s~Sp-sL~-l~~~l~~~G~~g 315 (450)
T 3bc8_A 242 SKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPG-RASASP-SLD-VLITLLSLGCSG 315 (450)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCS-CBCSHH-HHH-HHHHHHHHHHHH
T ss_pred hhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---Hhhc-CCcccH-HHH-HHHHHHHHHHHH
Confidence 2111111111211 34666555 88876667777765 5555555542 1111 111122 222 222222222222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCC
Q 017633 263 ---TYEYLNKITGELTQGIIDAGKKAGH 287 (368)
Q Consensus 263 ---~~~~~~~~~~~l~~~l~~~~~~~~~ 287 (368)
+.++..+..+++++.++++...++.
T Consensus 316 ~~~~i~~~~~~a~~l~~~l~~~~~~~g~ 343 (450)
T 3bc8_A 316 YRKLLKERKEMFVYLSTQLKKLAEAHNE 343 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhcCc
Confidence 3444577788889999887655553
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.31 E-value=1.5e-10 Score=103.54 Aligned_cols=310 Identities=15% Similarity=0.086 Sum_probs=165.7
Q ss_pred CcHHHHHHHHHHHHcC-------CCCCCCCh----hHHHHHHHHHhhCC-CCC-e--EEEeCChHHHHHHHHHHHHHhcC
Q 017633 10 SYLQVLAALGETMKKG-------TSFGAPCL----LENVLAEMVISAVP-SIE-M--VRFVNSGTEACMGVLRLARAFTG 74 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~~-------~~~~~~~~----~~~~l~~~l~~~~~-~~~-~--v~~~~~gt~a~~~al~~~~~~~~ 74 (368)
.+|.|++++...+.+- ..|+..++ .+.-..++..++|+ +.. + =+-..||++|+..+...+ ..+
T Consensus 66 ~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~Al--l~P 143 (490)
T 3ou5_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL--LQP 143 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH--CC-
T ss_pred CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHH--cCC
Confidence 4566666666555441 11222233 22233344555666 333 2 244568999999998766 467
Q ss_pred CceEEEEcCCCCCCchhhhh-------hcCCCccccCC--CCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEE
Q 017633 75 RERIIKFEGCYHGHADPFLV-------KAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 145 (368)
Q Consensus 75 ~~~vi~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~ 145 (368)
+|.|+..+....|+...... ..+......+| ....+. + |.+++++...++ ++++++
T Consensus 144 GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~----------I---Dyd~~~~~A~~~--kPklIi 208 (490)
T 3ou5_A 144 HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGL----------I---DYNQLALTARLF--RPRLII 208 (490)
T ss_dssp CCCEECBC----------------------------CBCEETTTTE----------E---CHHHHHHHHHHH--CCSEEE
T ss_pred CCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCc----------c---cHHHHHHHHhhc--CCCeEE
Confidence 89999988776666443211 11111111001 001111 1 899999999876 677887
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh-hch-hcccCccccccCCCcchhhhh--hhccCCccceeeee
Q 017633 146 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 221 (368)
Q Consensus 146 ~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~-~~~-~~g~~~~~~~~~~~~di~s~s--K~~~~G~~iG~v~~ 221 (368)
+-... .-...+ +++++++|++.|.+|++|-+| +|+ -.|..- +.+.. .|++|.| |+|. |.|.|.+++
T Consensus 209 ~G~Sa--Y~r~id----~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p--sP~~~-ADvVTtTTHKTLr-GPrGG~Il~ 278 (490)
T 3ou5_A 209 AGTSA--YARLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIP--SPFKH-ADIVTTTTHKTLR-GARSGLIFY 278 (490)
T ss_dssp ECCSS--CCSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC--CGGGT-CSEEEEESSSTTC-SCSCEEEEE
T ss_pred ECCcc--CccccC----HHHHHHHHhhcccEEEechhhhhhhhcccccC--Ccccc-ceEEecccccccc-CCCceEEEe
Confidence 75443 333455 999999999999999999999 777 433321 11222 4777666 8775 558888887
Q ss_pred hH---------------HHHHHhcCC-CCccccccCCCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHH
Q 017633 222 RR---------------DIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAG 282 (368)
Q Consensus 222 ~~---------------~~~~~~~~~-~~~~~~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~ 282 (368)
++ ++.+.+... -+..++ ++.....++...++....+ .++.+.+.++++.+.+.|.+.
T Consensus 279 ~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qg---gp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~- 354 (490)
T 3ou5_A 279 RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQG---GPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER- 354 (490)
T ss_dssp ECSEEEECC--CCEEECCCHHHHHHHHTTTTCS---SCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccccccccccchhHHHHHHHHHhhcCccccc---cchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 65 233333310 011222 2223343333334443222 335666777777777777664
Q ss_pred HhcCCceEEe-eccceEEEEeecCCCcccchhcccccHHHHHHHHHHHHcCeeecC----CC-CC----cccc------c
Q 017633 283 KKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAP----SQ-FE----AGFT------S 346 (368)
Q Consensus 283 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~~-~~----~~~~------~ 346 (368)
++..... ...+++.+++... ..+..+..+.|.+.||.+-- +. .+ .+|+ +
T Consensus 355 ---G~~vvsGgTdnHlvLvDl~~~------------g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~Tt 419 (490)
T 3ou5_A 355 ---GYSLVSGGTDNHLVLVDLRPK------------GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTS 419 (490)
T ss_dssp ---TCEEGGGSCSSSEEEEECGGG------------TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred ---CCeeecCCCCceEEEEecccc------------CCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHh
Confidence 4322111 2234667776532 22346677777788998853 21 11 1232 3
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q 017633 347 LAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 347 ~~~~~~~i~~~~~~l~~~l 365 (368)
..+.++|++++.+.|.+++
T Consensus 420 RG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 420 RQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 5678899988888887766
No 237
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=62.65 E-value=14 Score=27.76 Aligned_cols=59 Identities=19% Similarity=0.315 Sum_probs=35.2
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH-HHHHHhCCEE-EEehhhhch
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR-RITKENGALL-IFDEVMTGF 186 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~-~l~~~~~~~l-i~De~~~~~ 186 (368)
+.+.|.++++++ ++..+++.-+.++.|.........++.+ .+.+++++.+ ++||.++..
T Consensus 43 ~~~~l~~li~~~--~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 43 GLSRLSELIKDY--TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp CHHHHHHHHTTS--EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred HHHHHHHHHHHc--CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 689999999865 5666666544444343333222234444 4455578774 579999743
No 238
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=53.95 E-value=8 Score=25.66 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-++|.+++++||++++.|.--+
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5899999999999999997664
No 239
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=50.41 E-value=17 Score=28.74 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=29.0
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 139 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
-.+++++||-..+..|.... +.++.+++++||+.++.
T Consensus 158 l~Pa~vicEi~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 35788888877344566666 89999999999998874
No 240
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=47.19 E-value=12 Score=25.74 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-++|.+++++||++++.|.--+
T Consensus 44 A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCeEEECHHHH
Confidence 5789999999999999997664
No 241
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=46.55 E-value=12 Score=25.39 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-++|+++++++|++++.|.--+
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEECHHHH
Confidence 5799999999999999997664
No 242
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=45.61 E-value=13 Score=25.61 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-.+|.+++++||++++.|.--+
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCeecCHHHH
Confidence 5799999999999999996664
No 243
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=44.69 E-value=46 Score=29.25 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
+.++++.++|+++|.-+++|=.- ..++.+|..++-+++=|-+| .|+|+=+-+..++.+.
T Consensus 74 ~~~~~l~~~a~~~g~~vi~DVsp--------~~~~~Lg~s~~dl~~f~~lGi~gLRLD~Gf~~~eia~ 133 (385)
T 1x7f_A 74 AEFKEIINHAKDNNMEVILDVAP--------AVFDQLGISYSDLSFFAELGADGIRLDVGFDGLTEAK 133 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT--------TCC------CCCTHHHHHHTCSEEEESSCCSSHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCH--------HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHHHH
Confidence 34999999999999999999222 24566777766667777777 6788877666555444
No 244
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=42.54 E-value=34 Score=27.05 Aligned_cols=36 Identities=31% Similarity=0.361 Sum_probs=27.7
Q ss_pred CeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~-~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+++++|+-+ .+..|.... +.++.+++++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 5788888883 233465666 89999999999999884
No 245
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=41.32 E-value=1.7e+02 Score=25.16 Aligned_cols=143 Identities=13% Similarity=0.041 Sum_probs=71.7
Q ss_pred cHHHHHHHHHHHHcCCC-----CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEcCCC
Q 017633 11 YLQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 85 (368)
Q Consensus 11 ~~~v~~a~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~~~~ 85 (368)
++++.+.+.+.++.+.. .+...+...+..+++.+.+++.-.+.+-.++.=....+++.++.... -.+..+...+
T Consensus 140 ~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~-~~i~~iEqP~ 218 (354)
T 3jva_A 140 PNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALAD-YQIELVEQPV 218 (354)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTT-SCEEEEECCS
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHh-cCCCEEECCC
Confidence 34566666666554311 12222334455555666665433555544444445556655555433 3444444333
Q ss_pred CCCch-hhhhhc---CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHH
Q 017633 86 HGHAD-PFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 161 (368)
Q Consensus 86 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (368)
..... ....+. ..++.. ... ..+.+++++.+.++ ..-.+.+.+.. .|.+..
T Consensus 219 ~~~d~~~~~~l~~~~~iPIa~-----dE~-------------~~~~~~~~~~l~~~--~~d~v~~k~~~--~GGit~--- 273 (354)
T 3jva_A 219 KRRDLEGLKYVTSQVNTTIMA-----DES-------------CFDAQDALELVKKG--TVDVINIKLMK--CGGIHE--- 273 (354)
T ss_dssp CTTCHHHHHHHHHHCSSEEEE-----STT-------------CCSHHHHHHHHHHT--CCSEEEECHHH--HTSHHH---
T ss_pred ChhhHHHHHHHHHhCCCCEEE-----cCC-------------cCCHHHHHHHHHcC--CCCEEEECchh--cCCHHH---
Confidence 32211 111111 111100 000 11688888888753 34455555433 344444
Q ss_pred HHHHHHHHHHHhCCEEEEe
Q 017633 162 FLNAIRRITKENGALLIFD 180 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~D 180 (368)
..+++++|+++|+.+.+-
T Consensus 274 -~~~i~~~A~~~gi~~~~~ 291 (354)
T 3jva_A 274 -ALKINQICETAGIECMIG 291 (354)
T ss_dssp -HHHHHHHHHHTTCEEEEC
T ss_pred -HHHHHHHHHHcCCeEEec
Confidence 799999999999998764
No 246
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=40.36 E-value=35 Score=27.41 Aligned_cols=36 Identities=14% Similarity=0.104 Sum_probs=29.3
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 139 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
-.+++++||-.+.. |.... +.++.+++++||+.++.
T Consensus 177 l~Pa~VicEi~~dd-G~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMMGDD-GNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEBCTT-SSBCC----HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeCCC-CCcCC----HHHHHHHHHHcCCcEEE
Confidence 36888999888654 65666 89999999999999885
No 247
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=37.91 E-value=2e+02 Score=25.03 Aligned_cols=143 Identities=15% Similarity=0.100 Sum_probs=74.9
Q ss_pred CcHHHHHHHHHHHHc-CCC-----CCCC-ChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCCceEEEEc
Q 017633 10 SYLQVLAALGETMKK-GTS-----FGAP-CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 82 (368)
Q Consensus 10 ~~~~v~~a~~~~~~~-~~~-----~~~~-~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~~~vi~~~ 82 (368)
.++++.+.+.+.++. +.. .+.+ .+.-.+..+++.+.+++.-.+.+-.++.=....+++.+....+ -.+..+.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~-~~i~~iE 229 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKD-LDIYWFE 229 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTT-SCEEEEE
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhh-cCCCEEE
Confidence 456677777777665 321 1221 1233455566777776444555555554445666666655433 3454444
Q ss_pred CCCCCCchhhh-hhc---CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC
Q 017633 83 GCYHGHADPFL-VKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 158 (368)
Q Consensus 83 ~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (368)
..+.......+ .+. +.++.. ... ..+..++++.+..+ ..-+ +.+-.+..|.+..
T Consensus 230 qP~~~~d~~~~~~l~~~~~iPIa~-----dE~-------------~~~~~~~~~~i~~~--~~d~--v~~k~~~~GGit~ 287 (372)
T 3tj4_A 230 EPLWYDDVTSHARLARNTSIPIAL-----GEQ-------------LYTVDAFRSFIDAG--AVAY--VQPDVTRLGGITE 287 (372)
T ss_dssp SCSCTTCHHHHHHHHHHCSSCEEE-----CTT-------------CCSHHHHHHHHHTT--CCSE--ECCCTTTTTHHHH
T ss_pred CCCCchhHHHHHHHHhhcCCCEEe-----CCC-------------ccCHHHHHHHHHcC--CCCE--EEeCccccCCHHH
Confidence 44433222111 111 111100 001 11688898888843 2223 4444444555655
Q ss_pred CHHHHHHHHHHHHHhCCEEEE
Q 017633 159 KPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~ 179 (368)
..+++++|+++|+.+..
T Consensus 288 ----~~~ia~~A~~~gi~~~~ 304 (372)
T 3tj4_A 288 ----YIQVADLALAHRLPVVP 304 (372)
T ss_dssp ----HHHHHHHHHHTTCCBCC
T ss_pred ----HHHHHHHHHHcCCEEEe
Confidence 89999999999997653
No 248
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=36.79 E-value=1.5e+02 Score=25.77 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=33.7
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+..++++.+.++ ..-++.+.+ +..|.+.. ..+++++|+++|+.+..-
T Consensus 246 ~~~~~~~~~~~~--~~d~v~~k~--~~~GGit~----~~~i~~~A~~~gi~~~~~ 292 (368)
T 3q45_A 246 NSFDAERLIQIQ--ACDSFNLKL--SKSAGITN----ALNIIRLAEQAHMPVQVG 292 (368)
T ss_dssp SHHHHHHHHHTT--CCSEEEECT--TTTTSHHH----HHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHcC--CCCeEEech--hhcCCHHH----HHHHHHHHHHcCCcEEec
Confidence 688999998853 344555544 33455555 799999999999998764
No 249
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=35.98 E-value=1.8e+02 Score=25.35 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=78.0
Q ss_pred CCCcH-HHHHHHHHHHHcCCC-----CCCCChhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHHhcCC-ceEEE
Q 017633 8 FPSYL-QVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR-ERIIK 80 (368)
Q Consensus 8 g~~~~-~v~~a~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~~~~~-~~vi~ 80 (368)
|..+| ++.+.+.+.++.+.. .+...+...+..+++.+.+++.-.+.+-.++.=....|+++++...+- -++..
T Consensus 139 g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~ 218 (379)
T 3r0u_A 139 SCGNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEI 218 (379)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEE
Confidence 44444 566666666654311 122223344556677777764456666666665566677666555431 23444
Q ss_pred EcCCCCCCch-hhhhhc---CCCccccCCCCCCCCCCCCCCcccccCCCCHHHHHHHHHcCCCCeEEEEEcccCCCCCcc
Q 017633 81 FEGCYHGHAD-PFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFI 156 (368)
Q Consensus 81 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (368)
+.......-. ....+. +.++.. ... ..+..++++.+..+ ..-++.+.+.. .|.+
T Consensus 219 iEeP~~~~d~~~~~~l~~~~~iPIa~-----dE~-------------~~~~~~~~~~i~~~--a~d~v~~k~~~--~GGi 276 (379)
T 3r0u_A 219 IEQPVKYYDIKAMAEITKFSNIPVVA-----DES-------------VFDAKDAERVIDEQ--ACNMINIKLAK--TGGI 276 (379)
T ss_dssp EECCSCTTCHHHHHHHHHHCSSCEEE-----STT-------------CSSHHHHHHHHHTT--CCSEEEECHHH--HTSH
T ss_pred EECCCCcccHHHHHHHHhcCCCCEEe-----CCc-------------cCCHHHHHHHHHcC--CCCEEEECccc--cCCH
Confidence 4443433212 111111 111100 001 11688888888843 33445554433 3444
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 157 APKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 157 ~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
.. ..+++++|+++|+.+..-
T Consensus 277 ~~----~~~ia~~A~~~gi~~~~~ 296 (379)
T 3r0u_A 277 LE----AQKIKKLADSAGISCMVG 296 (379)
T ss_dssp HH----HHHHHHHHHHTTCEEEEC
T ss_pred HH----HHHHHHHHHHcCCEEEEe
Confidence 54 799999999999998874
No 250
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=35.68 E-value=36 Score=29.82 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCEEEEehhhhchhcccCccccccCCCcchhhhhhhcc-CCccceeeeehHHHHH
Q 017633 161 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 227 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~G~~iG~v~~~~~~~~ 227 (368)
+.++++.++|+++|.-+++|=.-. .++.+|..++-.++=|-+| .|+|+=+-+..++.+.
T Consensus 50 ~~~~~l~~~a~~~g~~vi~DIsp~--------~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~eia~ 109 (372)
T 2p0o_A 50 QRLTDLGAIAKAEKMKIMVDISGE--------ALKRAGFSFDELEPLIELGVTGLRMDYGITIEQMAH 109 (372)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECHH--------HHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCHH--------HHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHHHH
Confidence 449999999999999999994332 3456666666666667777 6788877666555444
No 251
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=34.51 E-value=1.3e+02 Score=27.08 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=31.5
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++.+++..+ ++=++.+-.+..|.+.. ..+|+++|+++|+.+..
T Consensus 310 ~~~~~~~~l~~~----a~div~~d~~~~GGit~----~~kia~lA~~~gv~v~~ 355 (441)
T 4a35_A 310 NRVIFKQLLQAK----ALQFLQIDSCRLGSVNE----NLSVLLMAKKFEIPVCP 355 (441)
T ss_dssp SHHHHHHHHHTT----CCSEECCCTTTSSHHHH----HHHHHHHHHHTTCCBCC
T ss_pred cHHHHHHHHHcC----CCCEEEECccccCCHHH----HHHHHHHHHHcCCEEEE
Confidence 677888888742 22334444455555565 88999999999998754
No 252
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=34.08 E-value=52 Score=26.26 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=26.5
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 140 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.+++++|+-.+ ..|.... +.++.+++++||+.+|.
T Consensus 167 ~Pa~vicEi~~-~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELTN-DDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBBC-TTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEeC-CCCCccC----HHHHHHHHHHcCCCEEE
Confidence 57788887664 3455566 88999999999998874
No 253
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=33.69 E-value=92 Score=20.24 Aligned_cols=47 Identities=6% Similarity=0.169 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
..+..++++.+ +.+.+++-..- +| +....+-++|++++++++.-..-
T Consensus 16 ~~~v~kai~~g--kaklViiA~D~-------~~-~~~~~i~~lc~~~~Ip~~~v~sk 62 (82)
T 3v7e_A 16 TKQTVKALKRG--SVKEVVVAKDA-------DP-ILTSSVVSLAEDQGISVSMVESM 62 (82)
T ss_dssp HHHHHHHHTTT--CEEEEEEETTS-------CH-HHHHHHHHHHHHHTCCEEEESCH
T ss_pred HHHHHHHHHcC--CeeEEEEeCCC-------CH-HHHHHHHHHHHHcCCCEEEECCH
Confidence 45666777643 45555443322 12 45899999999999998875433
No 254
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=33.55 E-value=1.6e+02 Score=25.84 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=33.6
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++++.+..+ ++=++.+-.+..|.+.. ..+++++|+++|+.++.
T Consensus 262 ~~~~~~~~i~~~----a~d~v~~k~~~~GGit~----~~~ia~~A~~~gi~~~~ 307 (392)
T 3ddm_A 262 GVAAFETALAAR----SLRVMQPDLAKWGGFSG----CLPVARAVVAAGLRYCP 307 (392)
T ss_dssp SHHHHHHHHHHT----CEEEECCCTTTTTHHHH----HHHHHHHHHHTTCEECC
T ss_pred CHHHHHHHHHcC----CCCEEEeCcchhCCHHH----HHHHHHHHHHcCCEEEe
Confidence 688888888743 34445555555566666 89999999999999864
No 255
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=33.53 E-value=1.7e+02 Score=25.56 Aligned_cols=47 Identities=17% Similarity=0.123 Sum_probs=32.4
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.+++++.+.++ ..-+ +.+-.+..|.+.. ..+++++|+++|+.+..=
T Consensus 258 ~~~~~~~~i~~~--~~d~--v~ik~~~~GGit~----~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 258 TRNAFNDYIRND--AIDV--LQADASRAGGITE----ALAISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHHHHHTT--CCSE--ECCCTTTSSCHHH----HHHHHHHHHHTTCEECCC
T ss_pred CHHHHHHHHHcC--CCCE--EEeCccccCCHHH----HHHHHHHHHHcCCEEEec
Confidence 578888888743 2223 3333344555555 889999999999988754
No 256
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=39.59 E-value=8.9 Score=25.70 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-++|.+++++||++++.|.--+
T Consensus 29 A~~I~e~A~e~~VPi~e~~~LA 50 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPELA 50 (87)
Confidence 4789999999999999996553
No 257
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=32.03 E-value=34 Score=31.03 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
++.++++++-||++|+-||+|=++-+
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 34499999999999999999988743
No 258
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=31.77 E-value=27 Score=25.08 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-.+|.+++++||++++.|.--+
T Consensus 73 A~~I~~~A~e~~VPi~e~~~LA 94 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5789999999999999997664
No 259
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=31.65 E-value=34 Score=29.37 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=33.0
Q ss_pred CHHHHHHHHHc-CCCCeEEEEEcccCCCCCcccCC--HHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPK--PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~-~~~~~~~~~~~~~~~~~g~~~~~--~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+.++ +-+.+++-+.. . .+|-...+ .+.+++++++|+++|+.+|+|
T Consensus 70 ~~~~~~~l~~~~G~N~VRi~~~~-~--~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD 124 (327)
T 3pzt_A 70 NKDSLKWLRDDWGITVFRAAMYT-A--DGGYIDNPSVKNKVKEAVEAAKELGIYVIID 124 (327)
T ss_dssp SHHHHHHHHHHTCCSEEEEEEES-S--TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEeEE-C--CCCcccCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45677776553 44456665542 1 12222222 355899999999999999998
No 260
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=30.70 E-value=36 Score=28.74 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=32.0
Q ss_pred CHHHHHHHHHc-CCCCeEEEEEcccCCCCCcccCC--HHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPK--PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~-~~~~~~~~~~~~~~~~~g~~~~~--~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+.++ +-+.+++-+... .++-...+ .+.++++++.|+++|+.+|+|
T Consensus 45 ~~~~~~~l~~~~G~N~VRip~~~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild 99 (303)
T 7a3h_A 45 NYESMKWLRDDWGINVFRAAMYTS---SGGYIDDPSVKEKVKEAVEAAIDLDIYVIID 99 (303)
T ss_dssp SHHHHHHHHHHTCCCEEEEEEESS---TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEeC---CCCccCCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45566655533 444566655421 12222122 355889999999999999998
No 261
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=30.37 E-value=29 Score=25.47 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-.+|.+++++||++++.|.--+
T Consensus 83 A~~I~e~A~e~gVPi~e~~~LA 104 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIPLA 104 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5789999999999999997664
No 262
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=29.87 E-value=40 Score=27.52 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCCeEEEEE-cccCC---CCCcccCCHHH---HHHHHHHHHHhCCEEEEehhh-hchhcccCccccccC
Q 017633 127 VSALENLFENNKGEIAAIIL-EPVVG---NSGFIAPKPDF---LNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFG 198 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~-~~~~~---~~g~~~~~~~~---l~~i~~l~~~~~~~li~De~~-~~~~~g~~~~~~~~~ 198 (368)
++.+++++..+ ...+.+ +...+ ..| ..++.++ .+++.++|++|++.||+++-. .....|..+. +++
T Consensus 46 ~~~~~~al~~G---v~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~~~lA~~~gAdGV--HLg 119 (243)
T 3o63_A 46 AQFAEAALAGG---VDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVL--HLG 119 (243)
T ss_dssp HHHHHHHHHTT---CSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEE--EEC
T ss_pred HHHHHHHHHCC---CCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCHHHHHHHhCCCEE--Eec
Confidence 57778888743 344444 33211 000 0122232 477999999999998885433 2112222211 222
Q ss_pred CC-cchhhhhhhccCCccceeeee-hHHHHHHhc
Q 017633 199 VT-PDLTTLGKIIGGGLPVGAYGG-RRDIMEMVA 230 (368)
Q Consensus 199 ~~-~di~s~sK~~~~G~~iG~v~~-~~~~~~~~~ 230 (368)
.. ......-+.++.+..+|.-+- .+++.+...
T Consensus 120 ~~dl~~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~ 153 (243)
T 3o63_A 120 QRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAA 153 (243)
T ss_dssp TTSSCHHHHHHHSCTTCEEEEEECSHHHHHHHHH
T ss_pred CCcCCHHHHHHhhCCCCEEEEeCCCHHHHHHHhh
Confidence 21 112233344455566776544 345555444
No 263
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=28.87 E-value=41 Score=28.14 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=31.2
Q ss_pred CHHHHHHHHH-cCCCCeEEEEEcccCCCCCccc-CC---HHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFE-NNKGEIAAIILEPVVGNSGFIA-PK---PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~-~~~~~~~~~~~~~~~~~~g~~~-~~---~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+-+ .+-+.++.-+.- ....++-.. .| .+.++++.+.|+++|+.+|+|
T Consensus 40 ~~~di~~~~~~~G~N~vRi~~~~-~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild 98 (293)
T 1tvn_A 40 TAETVAKAKTEFNATLIRAAIGH-GTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIID 98 (293)
T ss_dssp SHHHHHHHHHHHCCSEEEEEEEC-CTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEeccc-cCCCCCccccChHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3556655442 344456654432 111122221 22 245788999999999999998
No 264
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.75 E-value=67 Score=21.86 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=29.9
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE-EEehhhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL-IFDEVMT 184 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~l-i~De~~~ 184 (368)
+.+.+++.++++ +...+|+=.|.+.++.. -+..+..++.++..++.++.+ .+||-++
T Consensus 39 ~~~~l~~li~e~-~v~~iVvGlP~~mdGt~-~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRRE-GLGKLVVGLPLRTDLKE-SAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHH-TCCEEEEECCCCCCSSS-CCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHc-CCCEEEEeeccCCCCCc-CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 577888888875 23445555665544322 222211333333333237764 5898765
No 265
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=28.41 E-value=94 Score=27.12 Aligned_cols=45 Identities=16% Similarity=0.239 Sum_probs=31.9
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li 178 (368)
+..++.+++..+ ++=++++-.+..|.+.. ..+|+++|++||+.++
T Consensus 250 ~~~~~~~~i~~~----a~d~i~~d~~~~GGit~----~~~ia~~A~~~gi~v~ 294 (378)
T 4hpn_A 250 GRYGMWQALSAG----AVDILQPDLCGCGGFSE----IQKIATLATLHGVRIV 294 (378)
T ss_dssp HHHHHHHHHHTT----CCSEECCBTTTTTHHHH----HHHHHHHHHHHTCEEC
T ss_pred chHhHHHHHHcC----CCCEEeeCCeeCCChhH----HHHHHHHHHHcCCeEE
Confidence 577888888743 23334555555566666 8999999999999875
No 266
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=28.40 E-value=33 Score=25.44 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-.+|.+++++||++++.|.--+
T Consensus 82 A~~I~e~A~e~gVPi~e~~~LA 103 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5789999999999999997664
No 267
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=28.33 E-value=46 Score=27.92 Aligned_cols=22 Identities=14% Similarity=0.327 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 017633 159 KPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~D 180 (368)
+.+.++++++.|+++|+.+|+|
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEE
Confidence 3566999999999999999998
No 268
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=28.31 E-value=1.2e+02 Score=25.74 Aligned_cols=57 Identities=4% Similarity=-0.114 Sum_probs=33.0
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccC-CC--CCcc-cCCHHHHHHHHHHHHHhCCEEEEehh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVV-GN--SGFI-APKPDFLNAIRRITKENGALLIFDEV 182 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~-~~--~g~~-~~~~~~l~~i~~l~~~~~~~li~De~ 182 (368)
.-++++.+-..+-+..++-+.-... +. ++.. ....++++++++.|+++|+.+|+|--
T Consensus 38 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh 98 (341)
T 1vjz_A 38 KEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLH 98 (341)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 3455554444444556665432211 11 1211 12345589999999999999999943
No 269
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=27.98 E-value=76 Score=27.44 Aligned_cols=22 Identities=9% Similarity=0.280 Sum_probs=19.5
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 017633 159 KPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~D 180 (368)
..+.+++++++|+++|+.+|+|
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlD 106 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVE 106 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEE
Confidence 4555899999999999999998
No 270
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=27.34 E-value=64 Score=25.99 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=29.1
Q ss_pred CCeEEEEEcccCCC----------CCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 139 GEIAAIILEPVVGN----------SGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 139 ~~~~~~~~~~~~~~----------~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
-.+++++|+-.+.. .|.... +.++.+++++||+.++.
T Consensus 166 l~PagVicEi~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 166 KRPVAVISEIVDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp CCSBEEEEEBEECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEeCCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 35788888877651 366666 89999999999999885
No 271
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=27.32 E-value=44 Score=29.67 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhCCEEEEe
Q 017633 160 PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~D 180 (368)
.++++++++.|+++|+.+|+|
T Consensus 112 ~~~ld~vV~~a~~~Gl~VILD 132 (399)
T 3n9k_A 112 VQYLEKALGWARKNNIRVWID 132 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 567999999999999999999
No 272
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=26.91 E-value=45 Score=28.06 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhCCEEEEeh
Q 017633 163 LNAIRRITKENGALLIFDE 181 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De 181 (368)
++++.++|+++|+.||.|-
T Consensus 92 ~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 92 MKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEe
Confidence 7899999999999999884
No 273
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.67 E-value=1.8e+02 Score=21.03 Aligned_cols=44 Identities=9% Similarity=0.188 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
...+.+.++.+ +.+.+++-.. .++.+.++.+..+|++++++++.
T Consensus 46 ~~~v~kal~~g--kaklViiA~D-------~~~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 46 ANEATKALNRG--IAEIVLLAAD-------AEPLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHHHHHHHTT--CEEEEEEETT-------CSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcC--CCeEEEEecC-------CChHHHHhHHHHHHHhcCCcEEE
Confidence 56677777743 4444444332 22333359999999999998764
No 274
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=26.54 E-value=47 Score=27.66 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=32.0
Q ss_pred CHHHHHHHH-HcCCCCeEEEEEcccCCCCCcccCC---HHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLF-ENNKGEIAAIILEPVVGNSGFIAPK---PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~-~~~~~~~~~~~~~~~~~~~g~~~~~---~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+. ..+-+.++.-+. +. ..++....+ .+.++++.+.|+++|+.+|+|
T Consensus 40 ~~~d~~~l~~~~G~N~vR~~~~-~~-~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild 96 (291)
T 1egz_A 40 TADTVASLKKDWKSSIVRAAMG-VQ-ESGGYLQDPAGNKAKVERVVDAAIANDMYAIIG 96 (291)
T ss_dssp SHHHHHHHHHTTCCCEEEEEEE-CS-STTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecc-cc-ccCCCcCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 356666554 334445665543 21 222322222 345788999999999999998
No 275
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=26.14 E-value=87 Score=25.97 Aligned_cols=54 Identities=13% Similarity=0.250 Sum_probs=33.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccC---------CHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAP---------KPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~l~~i~~l~~~~~~~li~ 179 (368)
+++.+++.+.+.....+=+++-|-...+|-... +.++++.+.++++++++.+++
T Consensus 38 Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~ 100 (281)
T 3p8k_A 38 NETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVA 100 (281)
T ss_dssp HHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEE
Confidence 356666666643223344556666655553221 245689999999999998764
No 276
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=26.00 E-value=1.9e+02 Score=22.86 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=24.3
Q ss_pred eEEEEEcccCCC---CCcc-cCCHHHHHHHHHHHHHhCCEEE
Q 017633 141 IAAIILEPVVGN---SGFI-APKPDFLNAIRRITKENGALLI 178 (368)
Q Consensus 141 ~~~~~~~~~~~~---~g~~-~~~~~~l~~i~~l~~~~~~~li 178 (368)
...+++.|.... .|.. ....+|-+.+.++|+++|+.+|
T Consensus 126 ~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 126 AKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 466777776432 1221 2334667889999999997654
No 277
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=25.71 E-value=49 Score=28.74 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCEEEEe
Q 017633 161 DFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~D 180 (368)
+.+++++++|+++|+.+|+|
T Consensus 121 ~~ld~~v~~a~~~Gi~Vild 140 (359)
T 4hty_A 121 ELLDQVVAWNNELGIYTILD 140 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 34789999999999999998
No 278
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=25.10 E-value=2.8e+02 Score=24.51 Aligned_cols=46 Identities=17% Similarity=0.152 Sum_probs=31.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+..++++++..+ ++=++.+-.+..|.+.. ..+|+++|+++|+.+..
T Consensus 263 ~~~~~~~~i~~~----a~d~v~~d~~~~GGit~----~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 263 TKYEFHKLLQAG----GASILQLNVARVGGLLE----AKKIATLAEVHYAQIAP 308 (412)
T ss_dssp HHHHHHHHHHTT----CCSEECCCTTTTTSHHH----HHHHHHHHHHTTCEECC
T ss_pred CHHHHHHHHHcC----CCCEEEeCccccCCHHH----HHHHHHHHHHcCCEEEe
Confidence 578888888843 22234444444555555 89999999999998754
No 279
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=25.07 E-value=48 Score=27.70 Aligned_cols=22 Identities=9% Similarity=0.296 Sum_probs=19.7
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 017633 159 KPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~D 180 (368)
..+.++++++.|+++|+.+|+|
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild 83 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVE 83 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEE
Confidence 4556999999999999999998
No 280
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=25.04 E-value=51 Score=28.67 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=31.5
Q ss_pred CHHHHHHHH-HcCCCCeEEEEEcccCCCCCcccCC--HHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLF-ENNKGEIAAIILEPVVGNSGFIAPK--PDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~-~~~~~~~~~~~~~~~~~~~g~~~~~--~~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+. ..+-+.+++-+.-+ ..+....+ .+.++++++.|+++|+.+|+|
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~---~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld 109 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIG---ENGYATNPEVKDLVYEGIELAFEHDMYVIVD 109 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESS---SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeC---CCCCccCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 456666655 33444566655422 11111111 235889999999999999998
No 281
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=24.81 E-value=50 Score=29.71 Aligned_cols=25 Identities=8% Similarity=0.097 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-||++|+-||+|-++-
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeec
Confidence 3449999999999999999998773
No 282
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=24.79 E-value=1.5e+02 Score=20.91 Aligned_cols=45 Identities=13% Similarity=0.234 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
..+..++++.+ +...+++-..- +|.+....+-.+|++++++++.-
T Consensus 25 ~~~v~kai~~g--kakLViiA~D~-------~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 25 VKEVVKALRKG--EKGLVVIAGDI-------WPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHS--CCCEEEECTTC-------SCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHcC--CceEEEEeCCC-------CHHHHHHHHHHHHHhcCCcEEEE
Confidence 56666777754 44455543332 22223788999999999998653
No 283
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=24.61 E-value=57 Score=28.87 Aligned_cols=26 Identities=19% Similarity=0.162 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
.+.++++++-|+++|+-||+|=++-.
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH 93 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINH 93 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 34499999999999999999987743
No 284
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.61 E-value=55 Score=29.74 Aligned_cols=25 Identities=12% Similarity=-0.017 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-||++|+-||+|=+.-
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3449999999999999999997763
No 285
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=24.60 E-value=56 Score=29.26 Aligned_cols=25 Identities=20% Similarity=0.227 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-||++|+-||+|=+.-
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcc
Confidence 4459999999999999999997774
No 286
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=24.52 E-value=3.4e+02 Score=23.56 Aligned_cols=46 Identities=13% Similarity=0.079 Sum_probs=32.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
+.+++++.+..+ ..-++.+.+ +..|.+.. ..+++++|+++|+.+..
T Consensus 256 ~~~~~~~~i~~~--~~d~v~~k~--~~~GGit~----~~~ia~~A~~~gi~~~~ 301 (383)
T 3i4k_A 256 TPAEALAVVKAQ--AADVIALKT--TKHGGLLE----SKKIAAIAEAGGLACHG 301 (383)
T ss_dssp SHHHHHHHHHHT--CCSEEEECT--TTTTSHHH----HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcC--CCCEEEEcc--cccCCHHH----HHHHHHHHHHcCCeEEe
Confidence 688888888753 334555544 33455555 89999999999999875
No 287
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=24.33 E-value=57 Score=29.22 Aligned_cols=24 Identities=8% Similarity=0.182 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+.++++++-||++|+-||+|=++
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344999999999999999999776
No 288
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.19 E-value=57 Score=29.62 Aligned_cols=25 Identities=24% Similarity=0.054 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-||++|+-||+|=+.-
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4449999999999999999997773
No 289
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=24.17 E-value=53 Score=29.16 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeh
Q 017633 159 KPDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 159 ~~~~l~~i~~l~~~~~~~li~De 181 (368)
..++++++++.|+++|+.+|+|-
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDl 134 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDL 134 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEC
Confidence 34569999999999999999983
No 290
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.09 E-value=57 Score=30.00 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-||++|+-||+|=+.-
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecC
Confidence 4449999999999999999997773
No 291
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=24.03 E-value=54 Score=27.96 Aligned_cols=22 Identities=14% Similarity=0.114 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhCCEEEEeh
Q 017633 160 PDFLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De 181 (368)
.+.++++.++|+++|+.+|+|-
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4458999999999999999984
No 292
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=29.72 E-value=16 Score=25.81 Aligned_cols=22 Identities=18% Similarity=0.105 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhCCEEEEehhhh
Q 017633 163 LNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 163 l~~i~~l~~~~~~~li~De~~~ 184 (368)
-.+|.+++++||++++.|.--+
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPPLA 50 (114)
Confidence 4789999999999999996553
No 293
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=23.87 E-value=47 Score=27.99 Aligned_cols=52 Identities=17% Similarity=0.246 Sum_probs=32.5
Q ss_pred CHHHHHHHHHc-CCCCeEEEEEcccCCCCCcccCCH---HHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKP---DFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~---~~l~~i~~l~~~~~~~li~D 180 (368)
+.++++.+.++ +-+.+++-+. +. ..|....+. +.++++++.|+++|+.+|+|
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~-~~--~~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild 99 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMY-IQ--EDGYETNPRGFTDRMHQLIDMATARGLYVIVD 99 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEE-SS--TTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEee-ec--CCCcccCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45666666553 4445665543 21 122223332 55899999999999999998
No 294
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.61 E-value=59 Score=29.55 Aligned_cols=25 Identities=32% Similarity=0.228 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMT 184 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~ 184 (368)
.+.++++++-|+++|+-||+|=+.-
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3449999999999999999997773
No 295
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=23.19 E-value=65 Score=26.36 Aligned_cols=54 Identities=11% Similarity=0.031 Sum_probs=36.3
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+..+++.+....+-+-.+=+ +-++....|++.+++..+++++||+.+..-...
T Consensus 24 g~~~~~d~Le~~g~yID~lKf----g~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl 77 (251)
T 1qwg_A 24 PPKFVEDYLKVCGDYIDFVKF----GWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTL 77 (251)
T ss_dssp CHHHHHHHHHHHGGGCSEEEE----CTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHH
T ss_pred CHHHHHHHHHHhhhhcceEEe----cCceeeecCHHHHHHHHHHHHHcCCeEECCcHH
Confidence 577777777641111111111 335567788888999999999999999887654
No 296
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=23.16 E-value=1.1e+02 Score=22.34 Aligned_cols=57 Identities=19% Similarity=0.180 Sum_probs=31.8
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHH-HHHHHhCCE-EEEehhhh
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR-RITKENGAL-LIFDEVMT 184 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~-~l~~~~~~~-li~De~~~ 184 (368)
+.+.+++.++++ +...+|+=.|.+.++. .-+..+..++.+ .|.++++++ ..+||-++
T Consensus 41 ~~~~l~~li~e~-~v~~iVvGlP~~mdGt-~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 41 DWNIIERLLKEW-QPDEIIVGLPLNMDGT-EQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp CHHHHHHHHHHH-CCSEEEEEEEECTTSC-BCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred HHHHHHHHHHHc-CCCEEEEecccCCCcC-cCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 689999999975 2344555556554432 222222123333 233346776 55999886
No 297
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=23.04 E-value=2.4e+02 Score=21.04 Aligned_cols=46 Identities=9% Similarity=0.102 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCeeecCCCCCccccccCCCHHHHHHHHHHHHHHH
Q 017633 320 KFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 365 (368)
Q Consensus 320 ~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l 365 (368)
-...+++.|.++||-+.--......+++...+++.+++++.|-+.+
T Consensus 111 v~a~~f~aL~~~~InI~~is~Se~~is~vv~~~d~~~Av~~Lh~~f 156 (167)
T 2dt9_A 111 VPAKMFQAVASTGANIEMIATSEVRISVIIPAEYAEAALRAVHQAF 156 (167)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEEccCCEEEEEEeHHHHHHHHHHHHHHH
Confidence 4578899999998877432222345667778899999999887654
No 298
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=22.96 E-value=1.3e+02 Score=20.88 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 017633 127 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 179 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~ 179 (368)
.....+.++.+ +.+++++-.. . |++....+-.+|++++++++.
T Consensus 26 ~~~v~kai~~g--ka~lViiA~D------~--~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 26 SKRTIKFVKHG--EGKLVVLAGN------I--PKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp HHHHHHHHHTT--CCSEEEECTT------C--BHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcC--CceEEEEeCC------C--CHHHHHHHHHHHHHcCCCEEE
Confidence 56677777753 3444444222 1 455589999999999998653
No 299
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=22.88 E-value=1e+02 Score=17.00 Aligned_cols=25 Identities=12% Similarity=0.009 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc
Q 017633 261 PGTYEYLNKITGELTQGIIDAGKKA 285 (368)
Q Consensus 261 ~~~~~~~~~~~~~l~~~l~~~~~~~ 285 (368)
++..+++......+++.|.+++.++
T Consensus 11 ~~rkerIv~eCnavrqALQdLlseY 35 (40)
T 4e17_B 11 DDRRERIVAECNAVRQALQDLLSEY 35 (40)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999987765
No 300
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=22.66 E-value=62 Score=27.23 Aligned_cols=20 Identities=25% Similarity=0.225 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhCCEEEEe
Q 017633 161 DFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~D 180 (368)
++++++++.|+++|+.+|+|
T Consensus 72 ~~~~~~v~~~~~~gi~vild 91 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVD 91 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEe
Confidence 45889999999999999999
No 301
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=22.47 E-value=63 Score=27.90 Aligned_cols=56 Identities=11% Similarity=0.045 Sum_probs=33.2
Q ss_pred HHHHHHHHHc-CCCCeEEEEEccc-CC--CCCcc-cCCHHHHHHHHHHHHHhCCEEEEehh
Q 017633 127 VSALENLFEN-NKGEIAAIILEPV-VG--NSGFI-APKPDFLNAIRRITKENGALLIFDEV 182 (368)
Q Consensus 127 ~~~le~~~~~-~~~~~~~~~~~~~-~~--~~g~~-~~~~~~l~~i~~l~~~~~~~li~De~ 182 (368)
..++.+.+++ +-+..++-+.-.. .+ .+|.+ ..-.++++++++.|+++|+.+|+|=-
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH 105 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIH 105 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 5666677665 3344555443211 11 12211 11245688999999999999999943
No 302
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.38 E-value=65 Score=29.16 Aligned_cols=24 Identities=21% Similarity=0.427 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+.++++++-||++|+-||+|=++
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 455999999999999999999766
No 303
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=22.14 E-value=66 Score=29.15 Aligned_cols=26 Identities=31% Similarity=0.381 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhc
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTG 185 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~ 185 (368)
.+.++++++-||++|+-||+|=+.-+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH 122 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANH 122 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccc
Confidence 44599999999999999999977743
No 304
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.50 E-value=70 Score=28.69 Aligned_cols=24 Identities=21% Similarity=0.211 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+.++++++-|+++|+-||+|-+.
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 344999999999999999999776
No 305
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=21.25 E-value=67 Score=27.50 Aligned_cols=20 Identities=15% Similarity=0.222 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCEEEEeh
Q 017633 162 FLNAIRRITKENGALLIFDE 181 (368)
Q Consensus 162 ~l~~i~~l~~~~~~~li~De 181 (368)
.++++.++|+++|+.+|+|-
T Consensus 92 ~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 92 DMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEc
Confidence 48999999999999999863
No 306
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=21.20 E-value=67 Score=27.43 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCCeEEEEEccc-CCC--CCccc-CCHHHHHHHHHHHHHhCCEEEEehhh
Q 017633 127 VSALENLFENNKGEIAAIILEPV-VGN--SGFIA-PKPDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 127 ~~~le~~~~~~~~~~~~~~~~~~-~~~--~g~~~-~~~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
-++++.+-..+-+..++-+.-.. .+. +|... ...++++++++.|+++|+.+|+|--+
T Consensus 31 ~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 31 EKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 44554443444455666554221 111 12211 11345899999999999999999443
No 307
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.12 E-value=71 Score=29.48 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhhhch
Q 017633 160 PDFLNAIRRITKENGALLIFDEVMTGF 186 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~~~~ 186 (368)
.+.++++++-||++|+-||+|=++-++
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt 118 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHM 118 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCc
Confidence 444999999999999999999877443
No 308
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=21.07 E-value=68 Score=27.81 Aligned_cols=23 Identities=17% Similarity=0.083 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhCCEEEEehhh
Q 017633 161 DFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 161 ~~l~~i~~l~~~~~~~li~De~~ 183 (368)
++++++++.|.++|+.+|+|==+
T Consensus 91 ~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 91 MRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEEECCC
Confidence 45799999999999999999433
No 309
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.97 E-value=2.6e+02 Score=23.33 Aligned_cols=54 Identities=9% Similarity=-0.042 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHhhCCCCCeEEEeCChHHHHHHHHHHHHH--hcCCceEEEEcCCCCC
Q 017633 33 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--FTGRERIIKFEGCYHG 87 (368)
Q Consensus 33 ~~~~~l~~~l~~~~~~~~~v~~~~~gt~a~~~al~~~~~--~~~~~~vi~~~~~~~~ 87 (368)
+-+.++.+...+...+.-.|+...|+ ....-++.+++. -.+-|-+++.++.|+.
T Consensus 56 ~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 56 RERQAILSSFIAAGIAPSRIVTGVLV-DSIEDAADQSAEALNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHHHHHHHHHHHTTCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 44556666666665543446665543 223333332221 1367888888877654
No 310
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=20.96 E-value=72 Score=29.01 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhCCEEEEehhh
Q 017633 160 PDFLNAIRRITKENGALLIFDEVM 183 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~~ 183 (368)
.+.++++++-||++|+-||+|=++
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 445999999999999999999776
No 311
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.78 E-value=69 Score=27.54 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEehh
Q 017633 160 PDFLNAIRRITKENGALLIFDEV 182 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~li~De~ 182 (368)
.+.++++++.|+++|+.+|+|--
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecC
Confidence 45689999999999999999843
No 312
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=20.58 E-value=77 Score=16.07 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHhCCEE
Q 017633 160 PDFLNAIRRITKENGALL 177 (368)
Q Consensus 160 ~~~l~~i~~l~~~~~~~l 177 (368)
++.++++.+-+++.++.+
T Consensus 14 peelkklkeeakkanirv 31 (36)
T 2ki0_A 14 PEELKKLKEEAKKANIRV 31 (36)
T ss_dssp HHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhccEEE
Confidence 444888888888887753
No 313
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=20.29 E-value=3.7e+02 Score=23.50 Aligned_cols=46 Identities=15% Similarity=0.255 Sum_probs=32.6
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+..++++++.. . +=++.+-.+..|.+.. ..+++++|+++|+.+..-
T Consensus 253 ~~~~~~~~i~~---~--~d~v~~k~~~~GGit~----~~~ia~~A~~~gi~~~~h 298 (393)
T 4dwd_A 253 TLQALKDLILS---G--VRMVQPDIVKMGGITG----MMQCAALAHAHGVEFVPH 298 (393)
T ss_dssp SHHHHHHHHHH---T--CCEECCCTTTTTHHHH----HHHHHHHHHHHTCEECCC
T ss_pred CHHHHHHHHHc---C--CCEEEeCccccCCHHH----HHHHHHHHHHcCCEEeec
Confidence 68888888874 2 2234444444555565 899999999999988754
No 314
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=20.26 E-value=2.8e+02 Score=24.24 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=32.9
Q ss_pred CHHHHHHHHHcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 017633 126 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 180 (368)
Q Consensus 126 d~~~le~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~l~~~~~~~li~D 180 (368)
+..++++.+..+ ..-++.+.+.. .|.+.. ..+++++|+++|+.+.+=
T Consensus 254 ~~~~~~~~~~~~--a~d~v~~k~~~--~GGit~----~~~i~~~A~~~gi~~~~~ 300 (386)
T 3fv9_G 254 TETDLIAAIRDD--LCDGVGLKVSK--QGGITP----MLRQRAIAAAAGMVMSVQ 300 (386)
T ss_dssp SHHHHHHHHHTT--CCSEEEEEHHH--HTSHHH----HHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHhC--CCCEEEECccc--cCCHHH----HHHHHHHHHHcCCEEEeC
Confidence 688888888743 34455554433 344454 789999999999998743
Done!